View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19197_high_21 (Length: 248)
Name: NF19197_high_21
Description: NF19197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19197_high_21 |
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Alignment Details
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 9 - 243
Target Start/End: Complemental strand, 17574178 - 17573944
Alignment:
| Q |
9 |
gcaatagtttccctgaagctgctcctgatgcaacagtagcaagcctataataacaggtcagaagtttcaatatataataagggaaacctggtgctacaaa |
108 |
Q |
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| T |
17574178 |
gcaatagtttccctgaagctgctcctgatgcaacagtagcaagcctataataacaggtcagaagtttcaatatataataagggaaacctggtgctacaaa |
17574079 |
T |
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| Q |
109 |
actacctccatagcaaggcttagggaagtttcaatatattatagatagatgagatgataaaaattataaaagcatgcaaatcgtacctgcaaggcactac |
208 |
Q |
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| T |
17574078 |
actacctccatagcaaggcttagggaagtttcaatatattatagatagatgagatgataaaaattataaaagcatgcaaatcgtacctgcaaggcactac |
17573979 |
T |
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| Q |
209 |
agtatcatattcacagacaacatgatgatgtccat |
243 |
Q |
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|||||||||||||||||||||||||| ||| |||| |
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| T |
17573978 |
agtatcatattcacagacaacatgattatgaccat |
17573944 |
T |
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