View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19197_high_24 (Length: 238)
Name: NF19197_high_24
Description: NF19197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19197_high_24 |
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Alignment Details
Target: chr3 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 37396657 - 37396536
Alignment:
| Q |
76 |
gaggatacacttgaaagctttattattaagcaacaacgaaaaataagagaagaataccggctccaacgaggatgagaaccttggaggaggcaggtgccat |
175 |
Q |
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| T |
37396657 |
gaggatacacttgaaagctttattattaagcaacaacgaaaaataagagaagaataccggctccaacgaggatgagaaccttggaggaggcaggtgccat |
37396558 |
T |
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| Q |
176 |
ctgtaaggccatggttgttgtt |
197 |
Q |
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| T |
37396557 |
ctgtaaggccatggttgttgtt |
37396536 |
T |
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