View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19197_high_25 (Length: 235)
Name: NF19197_high_25
Description: NF19197
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19197_high_25 |
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Alignment Details
Target: chr5 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 71 - 221
Target Start/End: Original strand, 36756659 - 36756809
Alignment:
| Q |
71 |
ctactacttcaagcacatgaagaagttcagtctccaaaaccaactctgctacggtatcctggtgaggaaggttcagccataatatgctgtaaaatctcaa |
170 |
Q |
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| T |
36756659 |
ctacttcttcaagcacatgaagaagttcagtctccaaaaccaactctgctacggtatcctggtgaagaaggttcagccataatacgctgtaaaatctcaa |
36756758 |
T |
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| Q |
171 |
acccgcatagtaaatagagtcatcgatatatcattatcttgatgagatata |
221 |
Q |
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|||||||||||||||||||||||| ||| |||||||||||||||||||||| |
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| T |
36756759 |
acccgcatagtaaatagagtcatcaataaatcattatcttgatgagatata |
36756809 |
T |
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