View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19198_low_40 (Length: 241)
Name: NF19198_low_40
Description: NF19198
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19198_low_40 |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 51106093 - 51105856
Alignment:
| Q |
1 |
attctattagtacatgctggaaaaaataaaggcctagtggtgaccgacaatactggctttacaccggtgcagcttgcttctgataagaatcacagagaaa |
100 |
Q |
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| T |
51106093 |
attctattagtacatgctggaaaaaataaagacctagtggtgaccgacaatactggccttacaccggtgcagcttgcttctgataagaatcacagagaaa |
51105994 |
T |
|
| Q |
101 |
ttgnnnnnnnncttgaaaattaccagaggcgtcttgaaagacgcttagactctgacagcccgcttggaaatatatacaagttattcatgaatgctattag |
200 |
Q |
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| T |
51105993 |
ttgttttttttcttgaaaattaccagaggcgtcttgaaagacgcttagactctgacagcccgcttggaaatatatacaagttattcatgaatgctattag |
51105894 |
T |
|
| Q |
201 |
taaacccatcatttccaaacaccgattcaacacttcat |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
51105893 |
taaacccatcatttccaaacaccgattcaacacttcat |
51105856 |
T |
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