View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19201_low_15 (Length: 282)
Name: NF19201_low_15
Description: NF19201
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19201_low_15 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 4 - 282
Target Start/End: Original strand, 37812742 - 37813020
Alignment:
| Q |
4 |
gaagaagcataggttactacaaataatatattaatacaacgagatgacgacatccaccaaaatattaaaaacaatgactaacaacaattttaacaatgta |
103 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37812742 |
gaagaaccataggttactacaaataatatattaatacaacgagatgacgacatccaccaaaatattaaaaacaatgactaacaacaattttaacaatgta |
37812841 |
T |
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| Q |
104 |
actctataacttgcatatttaatacatcagttcatgcagccttttcagcttcagcggcttttgcagctgcttcctcctcccgtagcttcactaaagatgg |
203 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |
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| T |
37812842 |
actctataacttgcatatttaatacatcagctcatgcagccttttcagcttcagcggcttctgcagctgcttcctcctcgcgtagcttcactaaagatgg |
37812941 |
T |
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| Q |
204 |
aggtggttttacaacaatgcttttcttccattttttatcaagctttctggacaacctcttaccaataccctcctcaatc |
282 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37812942 |
aggtggttttacaacaatgcttttcttccattttttatcaagctttctggacaacctcttaccaataccctcctcaatc |
37813020 |
T |
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