View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19201_low_17 (Length: 245)
Name: NF19201_low_17
Description: NF19201
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19201_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 43920458 - 43920679
Alignment:
| Q |
1 |
aggatggataaaatagaggaacgtctcgaatatgattcatgataaaaatggaaaacacaagacaaaattaggatggatacatcttatttgaacgatatta |
100 |
Q |
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| T |
43920458 |
aggatggataaaatagaggaacgtctcgaatatgattcatgataaaaatggaaaacacaagacaaaattaggatggatacatcttatttgaacgatatta |
43920557 |
T |
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| Q |
101 |
ttataaatagaaatataagagtttttcttaagacaatataaaaaacaagtgggtttgtgttgtgaacccagaaattcaattgaagagtactatgttactg |
200 |
Q |
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| T |
43920558 |
ttataaatagaaatataagagtttttcttaagacaatataaaaaacaagtgggtttgtgttgtgaacccagaaattcaattgaagagtactatgttactg |
43920657 |
T |
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| Q |
201 |
aaagattgagaacggattagat |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
43920658 |
aaagattgagaacggattagat |
43920679 |
T |
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