View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19202_high_6 (Length: 204)
Name: NF19202_high_6
Description: NF19202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19202_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 42929654 - 42929601
Alignment:
| Q |
138 |
caaatgtaagaccaaccaataaatcaacaaaagcaccaacaatatagccatgat |
191 |
Q |
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| T |
42929654 |
caaatgtaagaccaaccaataaatcaacaaaagcaccaacaatatagccatgat |
42929601 |
T |
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Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42929791 - 42929751
Alignment:
| Q |
1 |
ttcctcgcgagcttccgaacaagaaacacaacgagtgctat |
41 |
Q |
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| T |
42929791 |
ttcctcgcgagcttccgaacaagaaacacaacgagtgctat |
42929751 |
T |
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