View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19204_low_8 (Length: 213)
Name: NF19204_low_8
Description: NF19204
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19204_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 10443382 - 10443579
Alignment:
| Q |
1 |
tgtttatacaaggtttgttggttgcatgcattttatagtttacctatcacagtattagggtaaaatcacagctagtttcagtatttactactaaacacat |
100 |
Q |
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| T |
10443382 |
tgtttatataagcattgtgggttgcatgcattttatagtttacctatcacagtattagggtaaaagcacagctagtttcagtatttactactaaacacat |
10443481 |
T |
|
| Q |
101 |
ttccatagccaataaggataaatttcaatgcttgtgtgttaactaaagaagggtggctacatgcttgaggttcccaccatggggtttgaggacagtta |
198 |
Q |
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| T |
10443482 |
taccattgccaattaggataaatttcaatgcttgtgtgttaactaaagaagggtggctccatgcttgaggctcccaccatggggtttgaggacagtta |
10443579 |
T |
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