View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19205_low_4 (Length: 507)
Name: NF19205_low_4
Description: NF19205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19205_low_4 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 488; Significance: 0; HSPs: 17)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 488; E-Value: 0
Query Start/End: Original strand, 1 - 492
Target Start/End: Complemental strand, 4864469 - 4863978
Alignment:
| Q |
1 |
gaagctaaacataactttcattccggccaataatataaatcaatcaaatccttattatgccttcattaatggaatagaagtcgtgtctatgccttctttt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4864469 |
gaagctaaacataactttcattccggccaataatataaatcaatcaaatccttattatgccttcattaatggaatagaagtcgtgtctatgccttctttt |
4864370 |
T |
|
| Q |
101 |
ctatattacacaaacctcaatgacccaaaatattatttgaaatcacttgactttgacaacacggactaccaagttcttaacgacaaagcgttagagacgg |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
4864369 |
ctatattacacaaacctcaatgacccaaaatattatttgaaatcacttgactttgacaacacgaactaccaagttcttaacgacaaagcgttagagacgg |
4864270 |
T |
|
| Q |
201 |
tttatagagtcaatgtcggtgaaagtcaagttccaccgggtgatgatactggtatgtttcgtaattgggacaatgattttcctcgttacttggagaaaca |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4864269 |
tttatagagtcaatgtcggtgaaagtcaagttccaccgggtgatgatactggtatgtttcgtaattgggacaatgattttcctcgttacttggagaaaca |
4864170 |
T |
|
| Q |
301 |
atatccacaaagcatatcaagtgattttaaacatcatcttaactatgaaaacaacaccattcaaaattacactgcaccagaagttgtgtacttaactgca |
400 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4864169 |
atatccacaaagcatatcaagtgattttaaacatcatcttaactatgaaaacaacaccattcaaaattacactgcaccagaagttgtgtacttaactgca |
4864070 |
T |
|
| Q |
401 |
agaagttacggacagtatgccacagaggagtacaatgtaacttggaattttgaagttgattctaattttacttatatggtaaggttacattt |
492 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4864069 |
agaagttacggacagtatgccacagaggagtacaatgtaacttggaattttgaagttgattctaattttacttatatggtaaggttacattt |
4863978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 492
Target Start/End: Original strand, 4696741 - 4697229
Alignment:
| Q |
1 |
gaagctaaacataactttcattccggccaataatataaatcaatcaaatccttattatgccttcattaatggaatagaagtcgtgtctatgccttctttt |
100 |
Q |
| |
|
|||| ||||||||||||||||||| || || ||||| || ||||||||||||||||| |||||||| ||||||||||| ||||| |||||||||||| |
|
|
| T |
4696741 |
gaagttaaacataactttcattcc---cagcaacataaaccagtcaaatccttattatgctttcattaacggaatagaagttgtgtcaatgccttctttt |
4696837 |
T |
|
| Q |
101 |
ctatattacacaaacctcaatgacccaaaatattatttgaaatcacttgactttgacaacacggactaccaagttcttaacgacaaagcgttagagacgg |
200 |
Q |
| |
|
|| |||||||||||||||| ||||||||||||| |||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4696838 |
ctctattacacaaacctcagtgacccaaaatatcatttgatatcacttgacttagacaacagggactaccaagttcttaacgacaaagcgttagagacgg |
4696937 |
T |
|
| Q |
201 |
tttatagagtcaatgtcggtgaaagtcaagttccaccgggtgatgatactggtatgtttcgtaattgggacaatgattttcctcgttacttggagaaaca |
300 |
Q |
| |
|
|||||||||||||||| |||| | |||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4696938 |
tttatagagtcaatgtgggtggcaatcaagttccaccaaaccaagatactggtatgtttcgtaactgggacaatgattttcctcgttacttggagaaaca |
4697037 |
T |
|
| Q |
301 |
atatccacaaagcatatcaagtgattttaaacatcatcttaactatgaaaacaacaccattcaaaattacactgcaccagaagttgtgtacttaactgca |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4697038 |
atatccacaaagcatatcaagtgattttaaacatcatcttaactatgaaaacaacaccattcaaaattacactgcaccagaagctgtgtacttaactgca |
4697137 |
T |
|
| Q |
401 |
agaagttacggacagtatgccacagaggagtacaatgtaacttggaattttgaagttgattctaattttacttatatggtaaggttacattt |
492 |
Q |
| |
|
|||||| ||| | ||| |||||||| | |||||||||||||||||| ||||||||| | ||||||||||||||||||||| ||||| |
|
|
| T |
4697138 |
agaagtcgtggattggatgagacagaggatttcaatgtaacttggaatttcgaagttgatgttggttttacttatatggtaaggttgcattt |
4697229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 83 - 492
Target Start/End: Complemental strand, 4667406 - 4666994
Alignment:
| Q |
83 |
gtgtctatgccttcttttctatattacacaaacctcaatgacccaaaatattatttgaaatcacttgactttgacaacacggactaccaagttcttaacg |
182 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||||| ||||||||| ||| |||||| || |||||||||||||| || || ||||| ||| |||| |
|
|
| T |
4667406 |
gtgtctatgccgtcttttctctattacacaaacctcagtgacccaaattatcatttgacattacttgactttgacagcaatgaataccatattcctaaca |
4667307 |
T |
|
| Q |
183 |
acaaagcgttagagacggtttatagagtcaatgtcggtgaaagtcaagttccaccgggtgatgatactggtatgtttcgtaattgggacaatgattttcc |
282 |
Q |
| |
|
||||||| | ||||||||||||||||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4667306 |
acaaagctatggagacggtttatagagtcagcgttggtgaaagtcaagttccacctggtgacgatactggtatgtttcgtaattgggacaatgattttcc |
4667207 |
T |
|
| Q |
283 |
tcgttacttggagaaacaatatccacaaagcatatcaagtgattttaaac---atcatcttaactatgaaaacaacaccattcaaaattacactgcacca |
379 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||| || |||||| |||||| | | || || |||| |||||||||||||||| |
|
|
| T |
4667206 |
tcgttacttggagaaacaatatccacaaagcatatcaagttattttggacctgatcatccaaactatttacaaaatactattccaaattacactgcacca |
4667107 |
T |
|
| Q |
380 |
gaagttgtgtacttaactgcaagaagttacggacagtatgccacagaggagtacaatgtaacttggaattttgaagttgattctaattttacttatatgg |
479 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| | |||||| |||| | || ||||| || ||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
4667106 |
gaagttgtgtacttaactgcaagaagttatggaatggatgccaaagagaattataatgtgacatggaattttaaagttgattctatttttacttatatgg |
4667007 |
T |
|
| Q |
480 |
taaggttacattt |
492 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
4667006 |
taaggttgcattt |
4666994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 35 - 492
Target Start/End: Complemental strand, 4637370 - 4636913
Alignment:
| Q |
35 |
ataaatcaatcaaatccttattatgccttcattaatggaatagaagtcgtgtctatgccttcttttctatattacacaaacctcaatgacccaaaatatt |
134 |
Q |
| |
|
||||| ||||||||||||| |||||| || ||||| || || ||||| ||||| |||||||||||||| |||||||||||||||||||||||||| || | |
|
|
| T |
4637370 |
ataaaccaatcaaatccttgttatgcttttattaacgggatcgaagttgtgtcaatgccttcttttctctattacacaaacctcaatgacccaaattact |
4637271 |
T |
|
| Q |
135 |
atttgaaatcacttgactttgacaacacggactaccaagttcttaacgacaaagcgttagagacggtttatagagtcaatgtcggtgaaagtcaagttcc |
234 |
Q |
| |
|
|||||||| || |||||| || ||||||| |||| | ||| ||| |||||||| || |||| ||||||||||||||| || ||| ||| ||||||||| |
|
|
| T |
4637270 |
atttgaaaccagttgactcagagtacacggaataccgaattcataaagacaaagctttggagatggtttatagagtcaacgttggtcaaaatcaagttcc |
4637171 |
T |
|
| Q |
235 |
accgggtgatgatactggtatgtttcgtaattgggacaatgattttcctcgttacttggagaaacaatatccacaaagcatatcaagtgattttaaacat |
334 |
Q |
| |
|
||| |||||||||| ||||||||||| ||||||| |||||||||||||| ||||||||||||| | || ||| || |||||||||| |||| |||| |
|
|
| T |
4637170 |
accaagtgatgatacaggtatgtttcgcaattggggcaatgattttcctctttacttggagaaagagtacccatctagtgtatcaagtgactttacacat |
4637071 |
T |
|
| Q |
335 |
catcttaactatgaaaacaacaccattcaaaattacactgcaccagaagttgtgtacttaactgcaagaagttacggacagtatgccacagaggagtaca |
434 |
Q |
| |
|
| || | ||| ||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||| |||| || | |
|
|
| T |
4637070 |
aacctaacatataaaaacaatgtcattccaaattacattgcaccagaagttgtgtacttaactgcaagaagttacggaatgtatgagacaaaggattata |
4636971 |
T |
|
| Q |
435 |
atgtaacttggaattttgaagttgattctaattttacttatatggtaaggttacattt |
492 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4636970 |
atgtaacttggaactttgaagttgattctgcttttacttatatggtaaggttacattt |
4636913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 56 - 408
Target Start/End: Complemental strand, 4673195 - 4672843
Alignment:
| Q |
56 |
tatgccttcattaatggaatagaagtcgtgtctatgccttcttttctatattacacaaacctcaatgacccaaaatattatttgaaatcacttgactttg |
155 |
Q |
| |
|
||||| |||||||| ||||| ||| | ||||| |||||||||||||| |||||||||||||||| ||||||||| ||| ||||||||||||||||||| | |
|
|
| T |
4673195 |
tatgctttcattaacggaatcgaaattgtgtcaatgccttcttttctctattacacaaacctcagtgacccaaattatcatttgaaatcacttgacttag |
4673096 |
T |
|
| Q |
156 |
acaacacggactaccaagttcttaacgacaaagcgttagagacggtttatagagtcaatgtcggtgaaagtcaagttccaccgggtgatgatactggtat |
255 |
Q |
| |
|
|||||||||| |||||| ||| |||||| ||||| || || | ||||||||||||||| || |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4673095 |
acaacacggaataccaaattcataacgaaaaagctttggaaatggtttatagagtcaacgttggtgaaagtcaagttccaccgggtgacgatactggtat |
4672996 |
T |
|
| Q |
256 |
gtttcgtaattgggacaatgattttcctcgttacttggagaaacaatatccacaaagcatatcaagtgattttaaacatcatcttaactatgaaaacaac |
355 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||||||||||||||||||||| || |||||||||| | || |||||||| |||| | |||||| |
|
|
| T |
4672995 |
gtttcgtaattgggacaatgattttcatggttacttggagaaacaatatccacttagtgtatcaagtgagtatatgcatcatctcaactttttaaacaat |
4672896 |
T |
|
| Q |
356 |
accattcaaaattacactgcaccagaagttgtgtacttaactgcaagaagtta |
408 |
Q |
| |
|
||||||| |||||||||||||||||||| ||| ||| |||||||||||||||| |
|
|
| T |
4672895 |
accattccaaattacactgcaccagaagctgtttacgtaactgcaagaagtta |
4672843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 492
Target Start/End: Original strand, 4711623 - 4712114
Alignment:
| Q |
1 |
gaagctaaacataactttcattccggccaataatataaatcaatcaaatccttattatgccttcattaatggaatagaagtcgtgtctatgccttctttt |
100 |
Q |
| |
|
|||||||| ||||||||||||||| || || |||||||| ||||||||||||||||| |||||||| ||||| ||| | |||||||||||||||||| |
|
|
| T |
4711623 |
gaagctaagcataactttcattcca---aacaacataaatcattcaaatccttattatgctttcattaacggaatcgaaattgtgtctatgccttctttt |
4711719 |
T |
|
| Q |
101 |
ctatattacacaaacctcaatgacccaaaatattatttgaaatcacttgactttgacaacacggactaccaagttcttaacgacaaagcgttagagacgg |
200 |
Q |
| |
|
|| |||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||| |||||| ||| |||||||||||| || || | || |
|
|
| T |
4711720 |
ctctattacacggaccttaatgacccaaaataccttttgaaatcacttgactttgacaacacggaataccaaattcataacgacaaagctttggaaatgg |
4711819 |
T |
|
| Q |
201 |
tttatagagtcaatgtcggtgaaagtcaagttccaccgggtgatgatactggtatgtttcgtaattgggacaatgattttcctcgttacttggagaaaca |
300 |
Q |
| |
|
| ||||||||||| || ||| ||| |||||||||||| | ||||| |||||||||||||||||||||| ||||||||||| |||| |||| ||| | |
|
|
| T |
4711820 |
tatatagagtcaacgttggtcaaaatcaagttccaccaaaccaagatacaggtatgtttcgtaattgggacagtgattttcctctttacctggaaaaaga |
4711919 |
T |
|
| Q |
301 |
atatccacaaagcatatcaagtgatttt---aaacatcatcttaactatgaaaacaacaccattcaaaattacactgcaccagaagttgtgtacttaact |
397 |
Q |
| |
|
|||||||||||| |||||| || || | | |||||| |||||| |||||| ||||||| ||||||||||||||||||| ||| ||||| ||| |
|
|
| T |
4711920 |
atatccacaaagtgtatcaactgtttatggaagtgatcatccaaactatttaaacaataccattcccaattacactgcaccagaagctgtatactttact |
4712019 |
T |
|
| Q |
398 |
gcaagaagttacggacagtatgccacagaggagtacaatgtaacttggaattttgaagttgattctaattttacttatatggtaaggttacattt |
492 |
Q |
| |
|
||||||||||| ||| | ||| |||||||| || ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4712020 |
gcaagaagttatggaatggatgtgacagaggattataatgtaacttggaatttcaaagttgattctagttttacttatatggtaaggttacattt |
4712114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 492
Target Start/End: Original strand, 4845563 - 4846054
Alignment:
| Q |
1 |
gaagctaaacataactttcattccggccaataatataaatcaatcaaatccttattatgccttcattaatggaatagaagtcgtgtctatgccttctttt |
100 |
Q |
| |
|
||||||||||||||||||| ||||| || || ||||| ||| ||||||| |||||| ||| |||| ||||| ||||| ||||| |||||||||||| |
|
|
| T |
4845563 |
gaagctaaacataactttctttccg---aacaacataaacgaattgaatcctttttatgctttcgttaacggaatcgaagttgtgtcgatgccttctttt |
4845659 |
T |
|
| Q |
101 |
ctatattacacaaacctcaatgacccaaaatattatttgaaatcacttgactttgacaacacggactaccaagttcttaacgacaaagcgttagagacgg |
200 |
Q |
| |
|
|| ||||||||||||| ||||| ||| |||||||| |||| | ||| ||||||||||| || ||| || ||| ||| || ||||| || |||| || |
|
|
| T |
4845660 |
ctctattacacaaacccagatgacttaaattattatttcaaattaattggctttgacaacagagaatacgaaattcgtaatgataaagctttggagatgg |
4845759 |
T |
|
| Q |
201 |
tttatagagtcaatgtcggtgaaagtcaagttccaccgggtgatgatactggtatgtttcgtaattgggacaatgattttcctcgttacttggagaaaca |
300 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||| ||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4845760 |
tttatagagtcaatgttggtgaaaatcaagttcaaccaagtgatgatacaggtatgtttcgcaattgggacaatgattttcctcgttacttggagaaaga |
4845859 |
T |
|
| Q |
301 |
atatccacaaagcatatcaagtgatttt---aaacatcatcttaactatgaaaacaacaccattcaaaattacactgcaccagaagttgtgtacttaact |
397 |
Q |
| |
|
|||||||| || |||||||| || | | ||||||| |||||| |||||| || |||| |||||||||||||||||||| ||| ||||||||| |
|
|
| T |
4845860 |
atatccacttagtgtatcaagtttttatggaagtgatcatctaaactatttaaacaatactattccaaattacactgcaccagaagctgtatacttaact |
4845959 |
T |
|
| Q |
398 |
gcaagaagttacggacagtatgccacagaggagtacaatgtaacttggaattttgaagttgattctaattttacttatatggtaaggttacattt |
492 |
Q |
| |
|
||||||||||| ||| |||||| |||||||| || ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4845960 |
gcaagaagttatggaaagtatgtgacagaggattataatgtaacttggaatttcgaagttgattctagttttacttatatggtaaggttacattt |
4846054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 1 - 492
Target Start/End: Original strand, 4783386 - 4783874
Alignment:
| Q |
1 |
gaagctaaacataactttcattccggccaataatataaatcaatcaaatccttattatgccttcattaatggaatagaagtcgtgtctatgccttctttt |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||| || | ||| |||| | |||| |||||| |||||||| ||||| ||||| |||||||||||||||||| |
|
|
| T |
4783386 |
gaagctaaacataactttcattcc---caacaacacaaaccaattgattcctagttatgctttcattaacggaatcgaagttgtgtctatgccttctttt |
4783482 |
T |
|
| Q |
101 |
ctatattacacaaacctcaatgacccaaaatattatttgaaatcacttgactttgacaacacggactaccaagttcttaacgacaaagcgttagagacgg |
200 |
Q |
| |
|
|| |||||||||||||||| ||||| | | ||| | | || | || || |||||||||||||| || |||||||||||| ||||||| |||||||||| |
|
|
| T |
4783483 |
ctctattacacaaacctcagtgaccaagattatcttatcaatttacctggttttgacaacacggattatcaagttcttaactacaaagctttagagacgg |
4783582 |
T |
|
| Q |
201 |
tttatagagtcaatgtcggtgaaagtcaagttccaccgggtgatgatactggtatgtttcgtaattgggacaatgattttcctcgttacttggagaaaca |
300 |
Q |
| |
|
||||||||||||| || ||| ||| |||||||||| | | ||||| || ||||||||||||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
4783583 |
tttatagagtcaacgttggtcaaaatcaagttccagcaaaccaagatacaggcatgtttcgtaattgggacaatgattctcctcgttacttggagaaaga |
4783682 |
T |
|
| Q |
301 |
atatccacaaagcatatcaagtgattttaaacatcatcttaactatgaaaacaacaccattcaaaattacactgcaccagaagttgtgtacttaactgca |
400 |
Q |
| |
|
|| ||| || |||||||||| |||| |||| | || | ||| ||||||| ||||| |||||||| ||||||||||| ||| |||||||||||| |
|
|
| T |
4783683 |
gtacccatctagtgtatcaagtgactttacacataacctaacatataaaaacaatgtcattccaaattacattgcaccagaaggtgtttacttaactgca |
4783782 |
T |
|
| Q |
401 |
agaagttacggacagtatgccacagaggagtacaatgtaacttggaattttgaagttgattctaattttacttatatggtaaggttacattt |
492 |
Q |
| |
|
|||||||| ||| ||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4783783 |
agaagttatggaatgtatgagacagaggattacaatgtaacttggaactttgaagttgattctgcttttacttatatggtaaggttacattt |
4783874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 1 - 492
Target Start/End: Original strand, 4815815 - 4816303
Alignment:
| Q |
1 |
gaagctaaacataactttcattccggccaataatataaatcaatcaaatccttattatgccttcattaatggaatagaagtcgtgtctatgccttctttt |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||| || | ||| |||| | |||| |||||| |||||||| ||||| ||||| |||||||||||||||||| |
|
|
| T |
4815815 |
gaagctaaacataactttcattcc---caacaacacaaaccaattgagtcctagttatgctttcattaacggaatcgaagttgtgtctatgccttctttt |
4815911 |
T |
|
| Q |
101 |
ctatattacacaaacctcaatgacccaaaatattatttgaaatcacttgactttgacaacacggactaccaagttcttaacgacaaagcgttagagacgg |
200 |
Q |
| |
|
|| |||||||||||||||| ||||| | | ||| | | || | || || | |||||||||||| ||||||||||||||| ||||||| |||||||||| |
|
|
| T |
4815912 |
ctctattacacaaacctcagtgaccaagattatcgtatcaagttacctggttctgacaacacggaataccaagttcttaacaacaaagctttagagacgg |
4816011 |
T |
|
| Q |
201 |
tttatagagtcaatgtcggtgaaagtcaagttccaccgggtgatgatactggtatgtttcgtaattgggacaatgattttcctcgttacttggagaaaca |
300 |
Q |
| |
|
||||||||||||| || ||| ||| |||||||||| | | ||||| || ||||||||||||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
4816012 |
tttatagagtcaacgttggtcaaaatcaagttccagcaaaccaagatacaggcatgtttcgtaattgggacaatgattctcctcgttacttggagaaaga |
4816111 |
T |
|
| Q |
301 |
atatccacaaagcatatcaagtgattttaaacatcatcttaactatgaaaacaacaccattcaaaattacactgcaccagaagttgtgtacttaactgca |
400 |
Q |
| |
|
|| ||| || |||||||||| |||| |||| | || | ||| ||||||| ||||| |||||||| ||||||||||| ||| |||||||||||| |
|
|
| T |
4816112 |
gtacccatctagtgtatcaagtgactttacacataacctaacatataaaaacaatgtcattccaaattacattgcaccagaaggtgtttacttaactgca |
4816211 |
T |
|
| Q |
401 |
agaagttacggacagtatgccacagaggagtacaatgtaacttggaattttgaagttgattctaattttacttatatggtaaggttacattt |
492 |
Q |
| |
|
|||||||| ||| ||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4816212 |
agaagttatggaatgtatgagacagaggattacaatgtaacttggaactttgaagttgattctgcttttacttatatggtaaggttacattt |
4816303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 83 - 492
Target Start/End: Complemental strand, 4631392 - 4630983
Alignment:
| Q |
83 |
gtgtctatgccttcttttctatattacacaaacctcaatgacccaaaatattatttgaaatcacttgactttgacaacacggactaccaagttcttaacg |
182 |
Q |
| |
|
|||||||||||||||||||| |||||||| || |||| |||| | || || |||| || |||||| ||||||| | || ||||| |||||||| |
|
|
| T |
4631392 |
gtgtctatgccttcttttctctattacactaatctcagtgacacgaactaccatttaaagatacttgattttgacagcggtgaataccagattcttaaca |
4631293 |
T |
|
| Q |
183 |
acaaagcgttagagacggtttatagagtcaatgtcggtgaaagtcaagttccaccgggtgatgatactggtatgtttcgtaattgggacaatgattttcc |
282 |
Q |
| |
|
||||||| | || || |||||||||||||| | ||||||| |||||||||||| | ||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
4631292 |
acaaagctatggaaacagtttatagagtcaacgctggtgaaaatcaagttccaccaaattatgatacaggtatgtttcgcaattgggacaatgattttcc |
4631193 |
T |
|
| Q |
283 |
tcgttacttggagaaacaatatccacaaagcatatcaagtgattttaaacatcatcttaactatgaaaacaacaccattcaaaattacactgcaccagaa |
382 |
Q |
| |
|
|||||||||||||||| ||||||||| || |||||||| ||||| ||||||||| |||||| |||||| |||||| ||||||||||||||||||| |
|
|
| T |
4631192 |
tcgttacttggagaaagaatatccacttagtgtatcaagttattttggacatcatctaaactatttaaacaataccatttcaaattacactgcaccagaa |
4631093 |
T |
|
| Q |
383 |
gttgtgtacttaactgcaagaagttacggacagtatgccacagaggagtacaatgtaacttggaattttgaagttgattctaattttacttatatggtaa |
482 |
Q |
| |
|
| ||| ||||||||||| |||||||| ||| | |||| ||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4631092 |
gctgtttacttaactgcgagaagttatggaatggatgcaacaaaggattacaatgtaacttggaattttgaagttgattcttcttttacttatatggtaa |
4630993 |
T |
|
| Q |
483 |
ggttacattt |
492 |
Q |
| |
|
| |||||||| |
|
|
| T |
4630992 |
gattacattt |
4630983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 240 - 492
Target Start/End: Complemental strand, 4663299 - 4663047
Alignment:
| Q |
240 |
gtgatgatactggtatgtttcgtaattgggacaatgattttcctcgttacttggagaaacaatatccacaaagcatatcaagtgattttaaacatcatct |
339 |
Q |
| |
|
|||||||||| |||||||||||| ||||||| ||||||| ||||||||||||||||| | ||||||||||||| |||||||||||||| | ||||||| |
|
|
| T |
4663299 |
gtgatgatacaggtatgtttcgttattgggaaaatgattctcctcgttacttggagatagaatatccacaaagtgtatcaagtgattttggagatcatct |
4663200 |
T |
|
| Q |
340 |
taactatgaaaacaacaccattcaaaattacactgcaccagaagttgtgtacttaactgcaagaagttacggacagtatgccacagaggagtacaatgta |
439 |
Q |
| |
|
|||||| |||||| ||||||| ||||||||||||||||||| ||| |||||||||||||||| ||| ||| |||||| |||||||| || |||||| |
|
|
| T |
4663199 |
aaactatttaaacaataccattccaaattacactgcaccagaaactgtatacttaactgcaagaaattatggaaagtatgtgacagaggattataatgta |
4663100 |
T |
|
| Q |
440 |
acttggaattttgaagttgattctaattttacttatatggtaaggttacattt |
492 |
Q |
| |
|
|||||||||||||| ||||||||| |||||| || ||||||||||||||||| |
|
|
| T |
4663099 |
acttggaattttgaggttgattcttcttttacatacatggtaaggttacattt |
4663047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 194 - 492
Target Start/End: Complemental strand, 4653874 - 4653576
Alignment:
| Q |
194 |
gagacggtttatagagtcaatgtcggtgaaagtcaagttccaccgggtgatgatactggtatgtttcgtaattgggacaatgattttcctcgttacttgg |
293 |
Q |
| |
|
||||| |||||||| ||||| || ||||||| |||||||||||| ||||||||| |||||||||||||||| || |||| |||||||||||| | |
|
|
| T |
4653874 |
gagacagtttatagtgtcaacgttggtgaaaatcaagttccaccaaacctagatactggtttgtttcgtaattgggataacgattatcctcgttacttag |
4653775 |
T |
|
| Q |
294 |
agaaacaatatccacaaagcatatcaagtgattttaaacatcatcttaactatgaaaacaacaccattcaaaattacactgcaccagaagttgtgtactt |
393 |
Q |
| |
|
||||||||||||||| ||| |||||||||||||| | ||||||| |||||| ||||||| || |||| |||||||| |||||||||| ||| ||| | |
|
|
| T |
4653774 |
agaaacaatatccactaagtgtatcaagtgattttgtaaatcatctcaactataaaaacaatacaattccaaattacatcgcaccagaagctgtatacct |
4653675 |
T |
|
| Q |
394 |
aactgcaagaagttacggacagtatgccacagaggagtacaatgtaacttggaattttgaagttgattctaattttacttatatggtaaggttacattt |
492 |
Q |
| |
|
|||||| |||||||| ||| | ||| ||||||||| |||||||||||||||||||| |||||||| || | |||||||||||||| ||||||||||| |
|
|
| T |
4653674 |
aactgcgagaagttatggaatgaatgtcacagaggattacaatgtaacttggaatttcgaagttgactcaacatttacttatatggtcaggttacattt |
4653576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 55 - 407
Target Start/End: Complemental strand, 4644200 - 4643848
Alignment:
| Q |
55 |
ttatgccttcattaatggaatagaagtcgtgtctatgccttcttttctatattacacaaacctcaatgacccaaaatattatttgaaatcacttgacttt |
154 |
Q |
| |
|
|||||| |||||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||| ||||| | | ||| | | || | | || || | |
|
|
| T |
4644200 |
ttatgctttcattaacggaatcgaagttgtgtctatgccttcttttctctattacacaaacctcagtgaccaagattatcgtatcaagttagatggctct |
4644101 |
T |
|
| Q |
155 |
gacaacacggactaccaagttcttaacgacaaagcgttagagacggtttatagagtcaatgtcggtgaaagtcaagttccaccgggtgatgatactggta |
254 |
Q |
| |
|
|| | | |||||| ||||||| |||||||| || |||| ||||||||||||||| || ||| || |||||||||||| | ||||| |||| |
|
|
| T |
4644100 |
gaagatataccataccaaattcttaatgacaaagctttggagatggtttatagagtcaacgttggtcgaattcaagttccaccaaaccaagatacaggta |
4644001 |
T |
|
| Q |
255 |
tgtttcgtaattgggacaatgattttcctcgttacttggagaaacaatatccacaaagcatatcaagtgattttaaacatcatcttaactatgaaaacaa |
354 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||| |||||| ||||| | |||||||||| |||||| ||| || |
|
|
| T |
4644000 |
tgtttcgtaattgggacaatgattatcctcgttacttggagaaacaatatccgctaagcgtatcaaatgattatgaacatcatctaaactatttaaaaaa |
4643901 |
T |
|
| Q |
355 |
caccattcaaaattacactgcaccagaagttgtgtacttaactgcaagaagtt |
407 |
Q |
| |
|
|||||| |||||||||||||||||||| ||| || |||||||||||||||| |
|
|
| T |
4643900 |
tgccattccaaattacactgcaccagaagctgtttatttaactgcaagaagtt |
4643848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 4654040 - 4653883
Alignment:
| Q |
1 |
gaagctaaacataactttcattccggccaataatataaatcaatcaaatccttattatgccttcattaatggaatagaagtcgtgtctatgccttctttt |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||| || | ||| || ||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
4654040 |
gaagctaaacataactttcattcc---caacaacacaaaccattcaaatccttattatgctttcattaatggaattgaagttgtgtctatgccttctttt |
4653944 |
T |
|
| Q |
101 |
ctatattacacaaacctcaatgacccaaaatattatttgaaatcacttgactttgacaaca |
161 |
Q |
| |
|
|| |||||| |||||||||||| |||||| ||| | || ||||||||||||| ||||||| |
|
|
| T |
4653943 |
ctctattactcaaacctcaatgccccaaattatgacttcaaatcacttgactcagacaaca |
4653883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 433 - 492
Target Start/End: Complemental strand, 4643786 - 4643727
Alignment:
| Q |
433 |
caatgtaacttggaattttgaagttgattctaattttacttatatggtaaggttacattt |
492 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4643786 |
caatgtaacttggaattttgaggttgattctggttttacttatatggtaaggttacattt |
4643727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 434 - 492
Target Start/End: Complemental strand, 4672790 - 4672732
Alignment:
| Q |
434 |
aatgtaacttggaattttgaagttgattctaattttacttatatggtaaggttacattt |
492 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
4672790 |
aatgtaacttggaattttgaggttgattcttctttcacttatatggtaaggttacattt |
4672732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 493
Target Start/End: Complemental strand, 4647625 - 4647579
Alignment:
| Q |
447 |
attttgaagttgattctaattttacttatatggtaaggttacatttg |
493 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
4647625 |
attttgaagttgattctggttttacttatatggtaaggttacttttg |
4647579 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 154; Significance: 2e-81; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 55 - 492
Target Start/End: Original strand, 18925344 - 18925781
Alignment:
| Q |
55 |
ttatgccttcattaatggaatagaagtcgtgtctatgccttcttttctatattacacaaacctcaatgacccaaaatattatttgaaatcacttgacttt |
154 |
Q |
| |
|
|||||| ||||| || ||||| || ||||||| |||||||||||||| ||||||||||||||||||||| |||| || |||| || | ||||| | || |
|
|
| T |
18925344 |
ttatgctttcatcaacggaattgagatcgtgtccatgccttcttttctctattacacaaacctcaatgactcaaatcatcatttaaagttacttggcctt |
18925443 |
T |
|
| Q |
155 |
gacaacacggactaccaagttcttaacgacaaagcgttagagacggtttatagagtcaatgtcggtgaaagtcaagttccaccgggtgatgatactggta |
254 |
Q |
| |
|
|| |||| | | ||| || | | ||||||| ||||||||||||||||||||||| || ||||| | ||||||||||| || |||| || |||| |
|
|
| T |
18925444 |
gaaaacatgaaatacaaaatcagcagtgacaaagtgttagagacggtttatagagtcagcgttggtgataatcaagttccacgaagtaatgacacaggta |
18925543 |
T |
|
| Q |
255 |
tgtttcgtaattgggacaatgattttcctcgttacttggagaaacaatatccacaaagcatatcaagtgattttaaacatcatcttaactatgaaaacaa |
354 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||| |||||| |||||||| |||| |||| |||||| |||||| |
|
|
| T |
18925544 |
tgtttcgttattgggacaacgattttcctcgttacttggagaaacaatatccactaagtgtatcaaatgattttacacataatctcaactatataaacaa |
18925643 |
T |
|
| Q |
355 |
caccattcaaaattacactgcaccagaagttgtgtacttaactgcaagaagttacggacagtatgccacagaggagtacaatgtaacttggaattttgaa |
454 |
Q |
| |
|
||||||| ||| ||||| |||||||||||||| |||||||||||||||||||| ||| | |||| ||| |||| || ||||||||||||||||||||| |
|
|
| T |
18925644 |
taccattccaaactacacggcaccagaagttgtatacttaactgcaagaagttatggaatggatgcgacaaaggattataatgtaacttggaattttgaa |
18925743 |
T |
|
| Q |
455 |
gttgattctaattttacttatatggtaaggttacattt |
492 |
Q |
| |
|
||||||||| ||||||||| ||||||| || ||||| |
|
|
| T |
18925744 |
gttgattctgcctttacttatttggtaagattgcattt |
18925781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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