View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19205_low_6 (Length: 363)
Name: NF19205_low_6
Description: NF19205
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19205_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 7 - 355
Target Start/End: Original strand, 25416095 - 25416443
Alignment:
| Q |
7 |
atttccatttgcttttcttcatatgcacaatacgtatatgtgaaaactttacctgtttcagttgagtccataaaaggggttaatccaaaagcgagtgtcc |
106 |
Q |
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| T |
25416095 |
atttccatttgcttttcttcatatgcacaatacgtatatgtgaaaattttacctgtttcagttgagtccataaaaggggttaatccaaaagtgagtgtcc |
25416194 |
T |
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| Q |
107 |
ataaacataaacatgtgctaataaatccaaacatgttagaaggaaaatgttgagcaaaaaagagattattacagttccaattaacatgtggtcgacacat |
206 |
Q |
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| T |
25416195 |
ataaacataaacatgtgctaataaatccaaacatgttagaaggaaaatgttgagcaaaaaagagattattacagttccaattaacatgtggtcgacacat |
25416294 |
T |
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| Q |
207 |
atacacacaattatactaattactatattttcatgtgacaaaagacatgaagaaaaagttgatatcactgccacgccaattaactcaatcaccttatctc |
306 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
25416295 |
atacacacaattatactaattactatattttcatgggacaaaagacataaagaaaaagttgatatcactgccacgccaattaattcaatcaccttatctc |
25416394 |
T |
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| Q |
307 |
taaatctattggttactctttctcttccaaccaaatcaaaaagcctttg |
355 |
Q |
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| T |
25416395 |
ttcatctattggttactctttctcttccaaccaaatcaaaaagcctttg |
25416443 |
T |
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