View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19206_high_19 (Length: 236)
Name: NF19206_high_19
Description: NF19206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19206_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 45404271 - 45404052
Alignment:
| Q |
1 |
atacatttagctcatttctaatctatgtttgactaccacttatacttnnnnnnnnnnnnnggaactatgattatttggcactcaaattgaacatgacacc |
100 |
Q |
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| T |
45404271 |
atacatttagctcatttctaatctatgtttgactaccacttatacttaaaaagaaaaaa-ggaactatgattatttggcactcaaattgaacatgacacc |
45404173 |
T |
|
| Q |
101 |
ctcttgattattgaattgaacatgtaaaggttgaatcatggaaataatttctacggtggttaaaggctggttattgtctcttatataaattgttattgtc |
200 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45404172 |
ctcttgattattgaattgaacatgtaaatgttgaatcatggaaataatttctacggtggttaaaggctggttattgtctcttatataaattgttattgtc |
45404073 |
T |
|
| Q |
201 |
tcttattgaacatgttctcta |
221 |
Q |
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||||||||||||||||||||| |
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| T |
45404072 |
tcttattgaacatgttctcta |
45404052 |
T |
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