View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19206_low_12 (Length: 372)
Name: NF19206_low_12
Description: NF19206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19206_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 356
Target Start/End: Original strand, 34714635 - 34715005
Alignment:
| Q |
1 |
taaaggtaaaatatgaaaatcctcaagcagcctcgtgtcatgaaatgaacatttcaaacttcaaacacatgatcaccaccgtccacctataaaatctcac |
100 |
Q |
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| T |
34714635 |
taaaagtaaaatatgaaaatcctcaagcagcctcgtgtcatgaaatgaacatttcaaacttcaaacacatgatcaccaccgtccacctataaaatctcac |
34714734 |
T |
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| Q |
101 |
tccaccgacaacatgaaacgacatgaaccaaatctataatcactaatcacgccaaaagtaaacaacaaattaaaattgtactagtagtatttattattaa |
200 |
Q |
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| T |
34714735 |
tccaccgacaacatgaaacgacatgaaccaaatctataatcactaatcacgccaaaagtaaacaacaaattaaaattgtactagtagtatttattattaa |
34714834 |
T |
|
| Q |
201 |
aagctgtaa---------------accgactattccctacaacaacaatgtttgtatcatcaccatcattcattttagatcaaaaataaagaaaaatccg |
285 |
Q |
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| T |
34714835 |
aagctgtaaatttgtaaaggtacgaccgactattccctacaacaacaatgtttgtatcatcaccaccattcatctttgatcaaaaataaagaaaaatccg |
34714934 |
T |
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| Q |
286 |
aagccataatcaaaataattaaggcttaattaacaaaaacgagaaccaatagaagaatcatgactagtaag |
356 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
34714935 |
aagccataatcaaaataattaaggcttaattaacaaaaacgagaaccaatagaagaatcatgactactaag |
34715005 |
T |
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