View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19206_low_20 (Length: 239)
Name: NF19206_low_20
Description: NF19206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19206_low_20 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 87 - 239
Target Start/End: Complemental strand, 10189444 - 10189292
Alignment:
| Q |
87 |
aaattaacaatacaactattcatgcacaaaatccaagtgcagtatcagtaacatttacagcaggtggaataacaaaatgccaaagtctcctaataccacc |
186 |
Q |
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| T |
10189444 |
aaattaacaacacaactattcatgcacaaaatccaagtgcagtatcagtaacatttacagcaggtggaataacaaaatgccaaagtctcctaataccacc |
10189345 |
T |
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| Q |
187 |
aactctatatttcatgcacaaaaactccttagcataaagtttctcaacctccc |
239 |
Q |
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| T |
10189344 |
aactctatatttcatgcacaaaaactccttagcataaagtttctcaacctccc |
10189292 |
T |
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