View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19206_low_6 (Length: 497)
Name: NF19206_low_6
Description: NF19206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19206_low_6 |
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Alignment Details
Target: chr4 (Bit Score: 442; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 442; E-Value: 0
Query Start/End: Original strand, 16 - 481
Target Start/End: Original strand, 26753885 - 26754350
Alignment:
| Q |
16 |
atgaaaaagtcgaattcaattaagctttcggatttggaggctcttcaatcacaacctccaaggaggagtgtatctcgatcaagaaagttgttaccacttc |
115 |
Q |
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| T |
26753885 |
atgaaaaagtcgaattcaattaagctttcggatttggaggctcttcaatcacaacctccaaggaggagtgtatctcgatcaagaaagttgttaccacttc |
26753984 |
T |
|
| Q |
116 |
atgttccaaccactgagtctttgcagagaaggtcaccaaattacatgaagcatatcagcagttcagatgcaaaaaaggagctagtaccagtcagtcttca |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |
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| T |
26753985 |
atgttccaaccactgagtctttgcagagaaggtcaccaaattacatgaagcatatcagcagttcagatgcaaaaaaggagctagtaccggtgagtcttca |
26754084 |
T |
|
| Q |
216 |
gaataaccaatttggttcagatgctaagaatcaaccacagaagtgtttgagtaattcaaaatccagttctctgtctagcagaaaaactgcaaaaactatg |
315 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26754085 |
gaataaccaatttggttcagatgctaagaatctaccacagaagtgtttgagtaattcaaaatccagttctctgtctagcagaaaaactgcaaaaactatg |
26754184 |
T |
|
| Q |
316 |
tcaagatcatctggtgtgaatttggttagaatattaacgaagacttctaatttaaagccaagtacaacttgtatgcaaaaatctaccacagcagcgctgc |
415 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26754185 |
tcaagatcatctagtgtgaatttggttagaatattaacgaaggcttctaatttaaagccaagtacaacttgtatgcaaaaatctaccacagcagcgctgc |
26754284 |
T |
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| Q |
416 |
gtgcagatattaatgcaccatgcagagctacttgctcttcaaatttaaaagattccaagttccctg |
481 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
26754285 |
gtgcagatattaatgcaccatgcagagctacttgctcttcaaatttaaaagatgccaagttccctg |
26754350 |
T |
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