View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19206_low_9 (Length: 438)
Name: NF19206_low_9
Description: NF19206
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19206_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 388; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 388; E-Value: 0
Query Start/End: Original strand, 1 - 424
Target Start/End: Original strand, 45404266 - 45404689
Alignment:
| Q |
1 |
atgtatgatatataaaaacgacgattcaaacctaacattttaaaacttctgatgtaattgaaatatgtaaaactcttaatggtcattagtttattgttgc |
100 |
Q |
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||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
45404266 |
atgtatgatatataaaagcgacgattcaaacccaacactttaaaacttctgatgtaattgaagtatgtaaaactcttaatggtcattagtttattgttgc |
45404365 |
T |
|
| Q |
101 |
ttacggcgctatttgaaacacataaatattaagacaaatgttgaggtagtaatagaaccaattcaagtcatctaaatgtgcattaccaaatcaaaatgat |
200 |
Q |
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|||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45404366 |
ttacggcgctctttgaaacacataaatattaagataaatgttgaggtaataatagaaccaattcaagtcatctaaatgtgcattaccaaatcaaaatgac |
45404465 |
T |
|
| Q |
201 |
ctaccctaaaaatatataattcacaaaatatttgcccctttctctcttaaataaatgtcacatattgtaaagataacattaacaaagacaaataatttaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45404466 |
ctaccctaaaaatatataattcacaaaatatttgcccctttctctcttaaataaatgtcacatattgtaaagataacattaacaaagacaaataatttaa |
45404565 |
T |
|
| Q |
301 |
accctccgaaagaaatggttcaatcaatttagttacaataccatgacaagcactaaatgccatgtgagtcagatccaccaaattagtacttctgctatac |
400 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
45404566 |
accctccgaaagaaatggttcaatcaatttagttacaataccatgacaagcactaaatgccatgtgagtcagatccaccaaattagtacttctgcgatac |
45404665 |
T |
|
| Q |
401 |
tagtacaattacaagttttgttcc |
424 |
Q |
| |
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|||||||||||||||||||||||| |
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| T |
45404666 |
tagtacaattacaagttttgttcc |
45404689 |
T |
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