View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19207_high_21 (Length: 249)
Name: NF19207_high_21
Description: NF19207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19207_high_21 |
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Alignment Details
Target: chr1 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 36 - 223
Target Start/End: Complemental strand, 19383052 - 19382865
Alignment:
| Q |
36 |
ttatttgtattacgagattgagagagtagaagatgtagtacctgctaacagaggagtgttcttcagtaggaaggagggagagggcgaaggagaactcata |
135 |
Q |
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| T |
19383052 |
ttatttgtattacgagattgagagagtagaaggtgtagtacctggtaacagaggagtgttcttgggatgggaggagggagagggcgaaggagaactcata |
19382953 |
T |
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| Q |
136 |
gggttgtgggtcccactttgatatgtccaccacccatctcctcactccttcctccattcttcctttccaaaccaactctcaagtcaac |
223 |
Q |
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| T |
19382952 |
gggttgtgggtcccactttgatatgtccaccacccatctcctcactccttcctccattcttcctttccaaaccaactctcaagtcaac |
19382865 |
T |
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