View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19207_high_7 (Length: 427)
Name: NF19207_high_7
Description: NF19207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19207_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 356; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 8 - 413
Target Start/End: Complemental strand, 37463489 - 37463083
Alignment:
| Q |
8 |
aaacatagggtaacgattcatacaacaa-aaaatattatgactcagcgcttcagttttctgaaggattctgctgctttgctcggtttttgaccagttttg |
106 |
Q |
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|||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
37463489 |
aaacatagggtaacgattcatacaacaacaaaaaattatgactcaacgcttcagttttctgaaggattctgctgctttgctcggtttttgatcagttttg |
37463390 |
T |
|
| Q |
107 |
ataggatgtatatttattccctatgaattacaattgtaattagtatgatttttcttcacattgaatgctcatatatat-aatgctctatctaggaatcta |
205 |
Q |
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|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
37463389 |
gtaggatgtatatttattcactatgaattacaat-gtaattagtatgatttttcttcacattgaatgctcatatatattaatgctctatctaggaatcta |
37463291 |
T |
|
| Q |
206 |
agttatcgttgaaagtaatttttgtcccttagttatgagcgagcaaatcagaaaaatcaattcccttggacttgtaataccccctttctgcatttgtcaa |
305 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37463290 |
agttatcgttgaaagtaatttctgtcccttagttatgagcgagcaaatcagaaaaatcaattcccttggacttgtaataccccctttctgcatttgtcaa |
37463191 |
T |
|
| Q |
306 |
tctaccttggaacattctccactccatgccacacctctccttaacctgcaaccaataccatgcaattatacacataacaaatcaaagttaatttaaatca |
405 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37463190 |
tctaccttggaacattctccactccatgccacacctctccttaacctgcaaccagtaccatgcaattatacacataacaaatcaaagttaatttaaatca |
37463091 |
T |
|
| Q |
406 |
catataat |
413 |
Q |
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|||||||| |
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| T |
37463090 |
catataat |
37463083 |
T |
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