View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19207_low_18 (Length: 266)
Name: NF19207_low_18
Description: NF19207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19207_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 10697818 - 10697566
Alignment:
| Q |
1 |
taaacctccaaacccaacccacaaaaataatgtatatttttacatctaaaaattatagttagttgtgctatgtagatgattagtgattcacgagtacatg |
100 |
Q |
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| T |
10697818 |
taaacctccaaacccaacccacaaaaataatgtatatttttacatctaaaaattatagttagttgtgctatgtagatgattagtgattcacgagtacatg |
10697719 |
T |
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| Q |
101 |
ttattttcatcaaaattgtggttgaaatttgatgtgaaagttttgttttggaaaataacacaactgtttttatatgcatgtattcaattacaagtatatt |
200 |
Q |
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| T |
10697718 |
ttattttcatgaaaattgtggttgaagtttgatgtgaaagttttgtattggaaaataacacaagtgtttttatatgcatgtattcaattacaagtatatt |
10697619 |
T |
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| Q |
201 |
aaatatcatttctcacaagtcacaatgacaaatttacggacgtcttgttgcct |
253 |
Q |
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| T |
10697618 |
aaatatcatttctcacaagtcacaaagacaaatttacggacgtcttgttgcct |
10697566 |
T |
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