View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19209_low_7 (Length: 474)
Name: NF19209_low_7
Description: NF19209
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19209_low_7 |
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Alignment Details
Target: chr6 (Bit Score: 423; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 1 - 456
Target Start/End: Original strand, 3446773 - 3447228
Alignment:
| Q |
1 |
aatattctctcaatttcgatggattggtttaacttctttnnnnnnnttatgagtaatctgaaaagaccgagctactactcgaggagccaaaaagttaacg |
100 |
Q |
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| T |
3446773 |
aatattctctcaatttcgatggattggtttaacttctttaaaaaaattatgagtaatctgaaaagaccgagctactactcgaggagccaaaaagttaacg |
3446872 |
T |
|
| Q |
101 |
agtcaccaataaaaagacaaccgatgtcaaattacctcatgaagccaacgagaatcactaaaagagcgaaatcaaatagtaagaggattaaaagctcatc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
3446873 |
agtcaccaataaaaagacaaccgatgtcaaattacctcatgaagccaacgagaatcactaaaagagcgaaatcaaatagcaagaggattaaaagctcatc |
3446972 |
T |
|
| Q |
201 |
actgcgtccaactctcctgactaggagtagttggcgttaaagctcactcaaataaagagacaaataagaaagactccccgaagggatcgagtgcccgtaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3446973 |
actgcgtccaactctcctgactaggagtagttggcgttaaagctcactcaaataaagagacaaataagaaagactccccgaagggatcgagtgcccgtaa |
3447072 |
T |
|
| Q |
301 |
gactctccccagggatcaaacatcgataagactcttccaaactgccgattgaacacaagaaatcggaaagattctcccaaagaatcgagcgctaataaga |
400 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3447073 |
gactctcccaagggatcaaacatcgataagactcttccaaactgccgattgaacacaagaaatcggaaagattctcccaaagaatcgagcgctaataaga |
3447172 |
T |
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| Q |
401 |
ctcccaggggatcaagcacaataaatcaaaaagactctccccatgaggggatcaag |
456 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
3447173 |
ctcccaggggatcaagcacaataaatcaaaaagattctccccatgaggggatcaag |
3447228 |
T |
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