View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19210_high_30 (Length: 285)
Name: NF19210_high_30
Description: NF19210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19210_high_30 |
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Alignment Details
Target: chr2 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 18 - 275
Target Start/End: Original strand, 2930801 - 2931058
Alignment:
| Q |
18 |
ctctgtttcttcatcttcatatataacctccaatggtgctttcacgttccattcaacaaaagactcatcaagaaacgaatttgattcaaaacccattttt |
117 |
Q |
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| T |
2930801 |
ctctgtttcttcatcttcatatataacatccaatggtgctttcacgttccattcaacaaaagactcatcaagaaacgaatttgattcaaaacccattttt |
2930900 |
T |
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| Q |
118 |
gatttcaacttttcttcataatttctcgagacccacttgtaaatttggtcaagagaatcattttcctctgttttcccctgtttttcatctccgttttctt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
2930901 |
gatttcaacttttcttcataatttctcgagacccacttgtaaatttggtcaagagaatcattttcctctgttttcccctgtttttcatctctgttttctt |
2931000 |
T |
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| Q |
218 |
ctttggtaacggattctaattcaccaaatttttccttttcttcactcttagatctctg |
275 |
Q |
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| T |
2931001 |
cattggtaacggattctaattcaccaaatttttccttttcttcactcttagatctctg |
2931058 |
T |
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