View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19210_low_28 (Length: 316)
Name: NF19210_low_28
Description: NF19210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19210_low_28 |
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Alignment Details
Target: chr6 (Bit Score: 288; Significance: 1e-161; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 11 - 298
Target Start/End: Complemental strand, 419884 - 419597
Alignment:
| Q |
11 |
cagagagtgcactttgtgaggctgctagtatcggaggagcaattcggatactggttgagacaattgaagatggatcttcactaggaaaagagcatgcagt |
110 |
Q |
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| T |
419884 |
cagagagtgcactttgtgaggctgctagtatcggaggagcaattcggatactggttgagacaattgaagatggatcttcactaggaaaagagcatgcagt |
419785 |
T |
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| Q |
111 |
tggcatacttctgcttatatgtcaaagctgcagagaaaaatatagagtattgattttgacagatggggtgatgccaggattacttcagttaaccgtcgat |
210 |
Q |
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| T |
419784 |
tggcatacttctgcttatatgtcaaagctgcagagaaaaatatagagtattgattttgacagatggggtgatgccaggattacttcagttaaccgtcgat |
419685 |
T |
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| Q |
211 |
ggaacgtggagagccaaatcgacggctagggaattgttgttgcttctgagagactgctctagttatagctcgagaagtacacaaatta |
298 |
Q |
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| T |
419684 |
ggaacgtggagagccaaatcgacggctagggaattgttgttgcttctgagagactgctctagttatagctcgagaagtacacaaatta |
419597 |
T |
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