View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19210_low_33 (Length: 281)
Name: NF19210_low_33
Description: NF19210
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19210_low_33 |
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Alignment Details
Target: chr1 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 7029082 - 7028819
Alignment:
| Q |
1 |
tatcagcagcaattaaaagtgttggttcatcaaccctctcttgattaccggtagtttgaagtttggatataatggcatcagcctgacgcacaattcacat |
100 |
Q |
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| T |
7029082 |
tatcagcagcaattaaaagtgttggttcatcaaccctctcttgattatcggtagtttgaagtttggatataatggcatcagcctgacgcacaattcacat |
7028983 |
T |
|
| Q |
101 |
ccaaaattagagggacagttaatctatagacacacccttccattgagaagaaagggaaacaagacagggaaagcaccaaagcaaatggaataacacatcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7028982 |
ccaaaattagagggacagttaatctatagacacacccttccattgagaagaaagggaaacaagacagggaaagcaccaaagcaaatggaataacacatcc |
7028883 |
T |
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| Q |
201 |
ttttacactatctgtactctatagtagaattacaacaaaaaatatatgttatatgatctcatac |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7028882 |
ttttacactatctgtactctatagtagaattacaacaaaaaatatatgttatatgatctcatac |
7028819 |
T |
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