View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19211_low_1 (Length: 420)

Name: NF19211_low_1
Description: NF19211
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19211_low_1
NF19211_low_1
[»] chr8 (5 HSPs)
chr8 (345-420)||(12296154-12296229)
chr8 (345-420)||(12300186-12300261)
chr8 (228-312)||(29250305-29250393)
chr8 (357-420)||(29091170-29091234)
chr8 (279-311)||(29840843-29840875)
[»] chr1 (16 HSPs)
chr1 (227-312)||(19100215-19100300)
chr1 (345-420)||(27789345-27789420)
chr1 (227-312)||(12629312-12629398)
chr1 (227-312)||(34507932-34508018)
chr1 (228-312)||(43021799-43021884)
chr1 (227-311)||(32943680-32943765)
chr1 (251-307)||(42264371-42264428)
chr1 (234-312)||(28015932-28016011)
chr1 (254-312)||(41574361-41574420)
chr1 (233-303)||(31893046-31893119)
chr1 (260-307)||(34529010-34529057)
chr1 (279-312)||(907722-907755)
chr1 (279-307)||(8681413-8681441)
chr1 (279-311)||(13534294-13534326)
chr1 (279-311)||(20471144-20471176)
chr1 (279-311)||(20560361-20560393)
[»] chr4 (10 HSPs)
chr4 (345-420)||(39819417-39819492)
chr4 (345-420)||(16434026-16434101)
chr4 (345-420)||(39820581-39820656)
chr4 (233-312)||(25219588-25219668)
chr4 (345-420)||(42559835-42559910)
chr4 (279-312)||(8667160-8667193)
chr4 (279-312)||(11416038-11416071)
chr4 (276-312)||(44673738-44673775)
chr4 (233-312)||(23795397-23795477)
chr4 (279-311)||(33040638-33040670)
[»] chr6 (7 HSPs)
chr6 (227-312)||(33325905-33325990)
chr6 (227-312)||(31633645-31633731)
chr6 (234-312)||(14641373-14641451)
chr6 (227-312)||(8212318-8212405)
chr6 (239-306)||(17112292-17112359)
chr6 (279-312)||(9351187-9351220)
chr6 (279-312)||(14982372-14982405)
[»] chr5 (10 HSPs)
chr5 (63-129)||(39516826-39516894)
chr5 (345-420)||(30574937-30575012)
chr5 (345-420)||(11571278-11571346)
chr5 (161-218)||(39516710-39516767)
chr5 (355-407)||(30575656-30575708)
chr5 (345-420)||(2358574-2358649)
chr5 (233-312)||(10720815-10720896)
chr5 (345-403)||(31930579-31930637)
chr5 (239-307)||(36489270-36489339)
chr5 (233-301)||(17065334-17065402)
[»] chr2 (6 HSPs)
chr2 (345-420)||(37912250-37912325)
chr2 (346-420)||(3322807-3322881)
chr2 (345-420)||(30517133-30517208)
chr2 (239-312)||(40926524-40926596)
chr2 (233-301)||(30418911-30418981)
chr2 (239-312)||(17151236-17151310)
[»] chr3 (8 HSPs)
chr3 (227-312)||(40790596-40790681)
chr3 (345-402)||(2779722-2779779)
chr3 (260-311)||(26954015-26954066)
chr3 (345-402)||(2780284-2780341)
chr3 (345-420)||(7726458-7726533)
chr3 (279-312)||(18517660-18517693)
chr3 (279-312)||(51661662-51661695)
chr3 (234-303)||(10997363-10997433)
[»] scaffold0012 (1 HSPs)
scaffold0012 (227-304)||(52639-52716)
[»] chr7 (8 HSPs)
chr7 (345-402)||(1469019-1469076)
chr7 (345-420)||(33670945-33671019)
chr7 (279-312)||(1633286-1633319)
chr7 (233-301)||(15468330-15468398)
chr7 (257-307)||(30460221-30460272)
chr7 (345-402)||(1468453-1468510)
chr7 (279-312)||(9411276-9411309)
chr7 (279-307)||(4463499-4463527)
[»] scaffold0195 (2 HSPs)
scaffold0195 (227-312)||(9049-9131)
scaffold0195 (227-312)||(14438-14520)
[»] scaffold0176 (1 HSPs)
scaffold0176 (227-312)||(26381-26467)
[»] scaffold0911 (1 HSPs)
scaffold0911 (279-312)||(2282-2315)
[»] scaffold0291 (1 HSPs)
scaffold0291 (279-312)||(15613-15646)
[»] scaffold0437 (1 HSPs)
scaffold0437 (234-312)||(11350-11429)


Alignment Details
Target: chr8 (Bit Score: 64; Significance: 8e-28; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 345 - 420
Target Start/End: Original strand, 12296154 - 12296229
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaagcaatgaatgagattaaa 420  Q
    |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  12296154 tgagaatggctaacttatgtgagaatggtgagaataaattgcagccatcggattaaaagcaatgaatgagattaaa 12296229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 345 - 420
Target Start/End: Complemental strand, 12300261 - 12300186
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaagcaatgaatgagattaaa 420  Q
    |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  12300261 tgagaatggctaacttatgtgagaatggtgagaataaattgcagccatcggattaaaagcaatgaatgagattaaa 12300186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 29250393 - 29250305
Alignment:
Q  228 tcttatgaggtttttggcctagtttcccctcttcttgtatatttgttttcatttttt----aataaaattttagagtttggcggcatag 312  Q
    |||| ||||| ||||||||||||| ||| ||||||||||||| | ||| | ||||||    ||||||||||||||||||||||||||||    
T  29250393 tcttctgagggttttggcctagttccccttcttcttgtatatatttttccttttttttaaaaataaaattttagagtttggcggcatag 29250305  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 420
Target Start/End: Original strand, 29091170 - 29091234
Alignment:
Q  357 acttatgtgagaatggtgaagataaattgcagtcatcggatt-aaaagcaatgaatgagattaaa 420  Q
    |||||||||||||||||||  ||||||||||| |||| |||| ||||| ||||| | ||||||||    
T  29091170 acttatgtgagaatggtgagaataaattgcagccatcagattgaaaaggaatgactaagattaaa 29091234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 29840843 - 29840875
Alignment:
Q  279 ttttttaataaaattttagagtttggcggcata 311  Q
    ||||||||||||||||||||| |||||||||||    
T  29840843 ttttttaataaaattttagagattggcggcata 29840875  T

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Target: chr1 (Bit Score: 54; Significance: 7e-22; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 227 - 312
Target Start/End: Original strand, 19100215 - 19100300
Alignment:
Q  227 ttcttatgaggtttttggcctagtttcccctcttcttgtatatttgttttcattttttaataaaattttagagtttggcggcatag 312  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||| | ||| | ||||||||||||||||||||||||| ||||||||    
T  19100215 ttcttctgagggttttggcctagttccccctcttcttgtatatatttttcctttttttaataaaattttagagtttgacggcatag 19100300  T

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Target: chr1; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 345 - 420
Target Start/End: Complemental strand, 27789420 - 27789345
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaagcaatgaatgagattaaa 420  Q
    ||||||||  |||||||||||||||||||||  ||||||||||| ||||||||||||| ||||| || ||||||||    
T  27789420 tgagaatgagtaacttatgtgagaatggtgagaataaattgcagccatcggattaaaaacaatggattagattaaa 27789345  T

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Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 312
Target Start/End: Complemental strand, 12629398 - 12629312
Alignment:
Q  227 ttcttatgaggtttttggcctagtttcccctcttcttgtatatttgttt-tcattttttaataaaattttagagtttggcggcatag 312  Q
    ||||| ||||| |||||||||| |  ||||||||||||||||| | ||| |  ||||||||||||||||||||||||||||||||||    
T  12629398 ttcttctgagggttttggcctaatcccccctcttcttgtatatatttttctttttttttaataaaattttagagtttggcggcatag 12629312  T

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Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 227 - 312
Target Start/End: Complemental strand, 34508018 - 34507932
Alignment:
Q  227 ttcttatgaggtttttggcctagtttcccc-tcttcttgtatatttgttttcattttttaataaaattttagagtttggcggcatag 312  Q
    ||||| ||||| ||||||||||||  |||| ||||||||||||| | ||| | ||||||||||||||||||||||||||| ||||||    
T  34508018 ttcttctgagggttttggcctagtccccccctcttcttgtatatatttttcctttttttaataaaattttagagtttggctgcatag 34507932  T

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Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 43021884 - 43021799
Alignment:
Q  228 tcttatgaggtttttggcctagtttcccctcttcttgtatatttgttttcatt-ttttaataaaattttagagtttggcggcatag 312  Q
    |||||||||| ||||||||||||  ||||||||| ||||||| | |||||    ||||||||||||||||||||||||||||||||    
T  43021884 tcttatgaggattttggcctagtcccccctcttcctgtatatattttttcccccttttaataaaattttagagtttggcggcatag 43021799  T

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Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 32943680 - 32943765
Alignment:
Q  227 ttcttatgaggtttttggcctagtttcccctcttcttgtatatttgttttc-attttttaataaaattttagagtttggcggcata 311  Q
    ||||| ||||| ||||||||||||  ||||||||||||||||| | ||| |  |||||||||||| |||| |||||||||||||||    
T  32943680 ttcttctgagggttttggcctagtcccccctcttcttgtatatatttttccttttttttaataaattttttgagtttggcggcata 32943765  T

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Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 42264371 - 42264428
Alignment:
Q  251 ttcccctcttcttgtatatttgttt-tcattttttaataaaattttagagtttggcgg 307  Q
    |||||||||| |||||||| | ||| ||||||||||||||||||||||||||||||||    
T  42264371 ttcccctctttttgtatatatttttctcattttttaataaaattttagagtttggcgg 42264428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 234 - 312
Target Start/End: Original strand, 28015932 - 28016011
Alignment:
Q  234 gaggtttttggcctagtttcccctcttcttgtatatttgttttcatttt-ttaataaaattttagagtttggcggcatag 312  Q
    |||| ||||||||||||  ||||||||||||||||| | ||| | |||| |||||||||||||| |||||||||| ||||    
T  28015932 gagggttttggcctagtcccccctcttcttgtatatatttttccctttttttaataaaattttatagtttggcggaatag 28016011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 312
Target Start/End: Complemental strand, 41574420 - 41574361
Alignment:
Q  254 ccctcttcttgtatatttgttttcatttttt-aataaaattttagagtttggcggcatag 312  Q
    |||||||||||||||| | ||| | |||||| ||||||||||||||||||||||||||||    
T  41574420 ccctcttcttgtatatatttttccttttttttaataaaattttagagtttggcggcatag 41574361  T

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Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 303
Target Start/End: Original strand, 31893046 - 31893119
Alignment:
Q  233 tgaggtttttggcctagtttcccctcttcttgtatatttgttttca---ttttttaataaaattttagagtttg 303  Q
    ||||| ||||||||||||  |||||||  |||||||||| |||||    |||||||||||||||||||||||||    
T  31893046 tgagggttttggcctagtcccccctctctttgtatattttttttcccctttttttaataaaattttagagtttg 31893119  T

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Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 307
Target Start/End: Complemental strand, 34529057 - 34529010
Alignment:
Q  260 tcttgtatatttgttttcattttttaataaaattttagagtttggcgg 307  Q
    |||||||||| | ||| | |||||||||||||||||||||||||||||    
T  34529057 tcttgtatatgtttttcctttttttaataaaattttagagtttggcgg 34529010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Complemental strand, 907755 - 907722
Alignment:
Q  279 ttttttaataaaattttagagtttggcggcatag 312  Q
    |||||||||||| |||||||||||||||||||||    
T  907755 ttttttaataaatttttagagtttggcggcatag 907722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 307
Target Start/End: Complemental strand, 8681441 - 8681413
Alignment:
Q  279 ttttttaataaaattttagagtttggcgg 307  Q
    |||||||||||||||||||||||||||||    
T  8681441 ttttttaataaaattttagagtttggcgg 8681413  T

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Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 13534294 - 13534326
Alignment:
Q  279 ttttttaataaaattttagagtttggcggcata 311  Q
    ||||||||||||||||||||||||||| |||||    
T  13534294 ttttttaataaaattttagagtttggcagcata 13534326  T

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Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 311
Target Start/End: Original strand, 20471144 - 20471176
Alignment:
Q  279 ttttttaataaaattttagagtttggcggcata 311  Q
    ||||||||||||||||||||||||||| |||||    
T  20471144 ttttttaataaaattttagagtttggcagcata 20471176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 20560393 - 20560361
Alignment:
Q  279 ttttttaataaaattttagagtttggcggcata 311  Q
    ||||||||||||||||||||||||||| |||||    
T  20560393 ttttttaataaaattttagagtttggcagcata 20560361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 420
Target Start/End: Original strand, 39819417 - 39819492
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaagcaatgaatgagattaaa 420  Q
    |||||||| ||||||||| ||||||||||||  |||||||||||  ||||||||||||||||||||||||||||||    
T  39819417 tgagaatgactaacttatatgagaatggtgagaataaattgcagcaatcggattaaaagcaatgaatgagattaaa 39819492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 345 - 420
Target Start/End: Original strand, 16434026 - 16434101
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaagcaatgaatgagattaaa 420  Q
    ||||||||| ||||||||||||||||||| |  |||||||||||||||| ||||||||| ||| | ||||||||||    
T  16434026 tgagaatggttaacttatgtgagaatggtcagaataaattgcagtcatcagattaaaagtaataagtgagattaaa 16434101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 345 - 420
Target Start/End: Complemental strand, 39820656 - 39820581
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaagcaatgaatgagattaaa 420  Q
    |||||||| ||||||||||||||||||||||  |||||||  || |||| |||||||| |||||||||||||||||    
T  39820656 tgagaatgactaacttatgtgagaatggtgagaataaattttagccatcagattaaaaacaatgaatgagattaaa 39820581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 25219588 - 25219668
Alignment:
Q  233 tgaggtttttggcctagtttcccctcttcttgtatatttgttttcatttt-ttaataaaattttagagtttggcggcatag 312  Q
    ||||| |||||||||||| |||| |||| |||||||| | ||| | |||| ||||||||||||||||||||||||||||||    
T  25219588 tgagggttttggcctagtctcccttctttttgtatatatttttccctttttttaataaaattttagagtttggcggcatag 25219668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 345 - 420
Target Start/End: Original strand, 42559835 - 42559910
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaagcaatgaatgagattaaa 420  Q
    |||||||| |||||||||||||||||||| |  ||||||||||| | ||||||||||||||||   ||||||||||    
T  42559835 tgagaatgactaacttatgtgagaatggtaagaataaattgcagccgtcggattaaaagcaataggtgagattaaa 42559910  T

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Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Complemental strand, 8667193 - 8667160
Alignment:
Q  279 ttttttaataaaattttagagtttggcggcatag 312  Q
    ||||||||||| ||||||||||||||||||||||    
T  8667193 ttttttaataatattttagagtttggcggcatag 8667160  T

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Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Complemental strand, 11416071 - 11416038
Alignment:
Q  279 ttttttaataaaattttagagtttggcggcatag 312  Q
    ||||||||||||||||||||||||||| ||||||    
T  11416071 ttttttaataaaattttagagtttggcagcatag 11416038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 312
Target Start/End: Complemental strand, 44673775 - 44673738
Alignment:
Q  276 tcattttttaataaaatttt-agagtttggcggcatag 312  Q
    |||||||||||||||||||| |||||||||||||||||    
T  44673775 tcattttttaataaaatttttagagtttggcggcatag 44673738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 23795397 - 23795477
Alignment:
Q  233 tgaggtttttggcctagtttcccctcttcttgtatat-ttgttttcattttttaataaaattttagagtttggcggcatag 312  Q
    ||||| |||||| ||| | |||||||||||||||||| || |   | |||||| |||||||||||||||||| ||||||||    
T  23795397 tgagggttttggtctaatgtcccctcttcttgtatatattttcccctttttttgataaaattttagagtttgacggcatag 23795477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 311
Target Start/End: Complemental strand, 33040670 - 33040638
Alignment:
Q  279 ttttttaataaaattttagagtttggcggcata 311  Q
    ||||||||||||||||||||||||| |||||||    
T  33040670 ttttttaataaaattttagagtttgacggcata 33040638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 312
Target Start/End: Complemental strand, 33325990 - 33325905
Alignment:
Q  227 ttcttatgaggtttttggcctagtttcccctcttcttgtatatttgttttcattttttaataaaattttagagtttggcggcatag 312  Q
    ||||| ||||| ||||||||||||  ||||||||||||||||| | ||| | ||||||||||||||||||||||||| ||||||||    
T  33325990 ttcttctgagggttttggcctagtcccccctcttcttgtatatatttttcctttttttaataaaattttagagtttgacggcatag 33325905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 227 - 312
Target Start/End: Complemental strand, 31633731 - 31633645
Alignment:
Q  227 ttcttatgaggtttttggcctagtttcccctcttcttgtatatttgttttcatttttt-aataaaattttagagtttggcggcatag 312  Q
    ||||| ||||| ||||||||||||  ||||||||||||||||| | ||| | |||||| ||||||||||||||||||||||||||||    
T  31633731 ttcttctgagggttttggcctagtcccccctcttcttgtatatatttttccttttttttaataaaattttagagtttggcggcatag 31633645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 234 - 312
Target Start/End: Original strand, 14641373 - 14641451
Alignment:
Q  234 gaggtttttggcctagtttcccctcttcttgtatatttgttttcattttttaataaaattttagagtttggcggcatag 312  Q
    |||| ||||||||||||  |||||||||||||| | || ||| | |||||||||||| |||||||| ||||||||||||    
T  14641373 gagggttttggcctagtcccccctcttcttgtacagttttttcccttttttaataaagttttagagattggcggcatag 14641451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 312
Target Start/End: Complemental strand, 8212405 - 8212318
Alignment:
Q  227 ttcttatgaggtttttggcctagtttcccctcttcttgtatatttgttttc--attttttaataaaattttagagtttggcggcatag 312  Q
    |||||| |||| ||||||||||||  |||||||| |||||||| | ||| |   |||||||||||||||||||||||| |||||||||    
T  8212405 ttcttacgagggttttggcctagtcccccctctttttgtatatatttttcccttttttttaataaaattttagagtttagcggcatag 8212318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 239 - 306
Target Start/End: Complemental strand, 17112359 - 17112292
Alignment:
Q  239 ttttggcctagtttcccctcttcttgtatatttgttttcattttttaataaaattttagagtttggcg 306  Q
    |||||| |||||  ||||||||||||||||| | ||| | |||||||||||||||||| | |||||||    
T  17112359 ttttggtctagtgccccctcttcttgtatatatttttcctttttttaataaaattttaaaatttggcg 17112292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Complemental strand, 9351220 - 9351187
Alignment:
Q  279 ttttttaataaaattttagagtttggcggcatag 312  Q
    |||||||||||||||||||| |||||||||||||    
T  9351220 ttttttaataaaattttagaatttggcggcatag 9351187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Original strand, 14982372 - 14982405
Alignment:
Q  279 ttttttaataaaattttagagtttggcggcatag 312  Q
    ||||||||||||| ||||||||||||||||||||    
T  14982372 ttttttaataaaaatttagagtttggcggcatag 14982405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 7e-19; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 39516894 - 39516826
Alignment:
Q  63 tgtgtctatgattagcaagtggtac-ttttttgtttgaaaatataga-tttaagatatagagttatgat 129  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||    
T  39516894 tgtgtctatgattagcaagtgctactttttttgtttgaaaatatagattttaagatatagagttatgat 39516826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 420
Target Start/End: Original strand, 30574937 - 30575012
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaagcaatgaatgagattaaa 420  Q
    ||||||||  |||||||||||||||||||||  |||||||||||||||||||||| |||||||| || ||||||||    
T  30574937 tgagaatgagtaacttatgtgagaatggtgagaataaattgcagtcatcggattagaagcaatggattagattaaa 30575012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 420
Target Start/End: Original strand, 11571278 - 11571346
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaagcaatgaatgagattaaa 420  Q
    |||||||| ||||||||||||||||||||||  ||||||||       ||||||||||||||||||||||||||||    
T  11571278 tgagaatgactaacttatgtgagaatggtgagaataaattg-------cggattaaaagcaatgaatgagattaaa 11571346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 39516767 - 39516710
Alignment:
Q  161 gaagagcaacacattcatgaatcattacatgaaataggttttttctttggtactcctt 218  Q
    |||||| ||||||||||||||||||| |||||| ||||||||| |||||||| |||||    
T  39516767 gaagagtaacacattcatgaatcattgcatgaagtaggtttttcctttggtattcctt 39516710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 30575708 - 30575656
Alignment:
Q  355 taacttatgtgagaatggtgaagataaattgcagtcatcggattaaaagcaat 407  Q
    ||||||||||||||||| |||  ||||||||||| ||||||||||||||||||    
T  30575708 taacttatgtgagaatgatgagaataaattgcagccatcggattaaaagcaat 30575656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 420
Target Start/End: Original strand, 2358574 - 2358649
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaagcaatgaatgagattaaa 420  Q
    ||||||||| || |||||||||||||| |||  ||||||| ||  |||| |||||||||||||| |||||||||||    
T  2358574 tgagaatggatatcttatgtgagaatgatgagaataaattacacccatcagattaaaagcaatggatgagattaaa 2358649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 10720815 - 10720896
Alignment:
Q  233 tgaggtttttggcctagtttcccct--cttcttgtatatttgttttcattttttaataaaattttagagtttggcggcatag 312  Q
    |||||||||| |||||||  |||||  |||||||||||| | ||| | |||||||||||||||||||||||| || ||||||    
T  10720815 tgaggtttttcgcctagtcccccctttcttcttgtatatatttttcccttttttaataaaattttagagtttagcagcatag 10720896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 403
Target Start/End: Original strand, 31930579 - 31930637
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaag 403  Q
    ||||||||  || ||||||||||||||||||  ||||||||||| |||| |||||||||    
T  31930579 tgagaatgagtatcttatgtgagaatggtgagaataaattgcagccatcagattaaaag 31930637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 307
Target Start/End: Complemental strand, 36489339 - 36489270
Alignment:
Q  239 ttttggcctagtttcccctcttcttgtatatttgttttc-attttttaataaaattttagagtttggcgg 307  Q
    |||||| ||||| |||||||||||||||||| | |||||  ||| |||||||| ||||||||||| ||||    
T  36489339 ttttggtctagtctcccctcttcttgtatatattttttctctttattaataaatttttagagtttagcgg 36489270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 17065402 - 17065334
Alignment:
Q  233 tgaggtttttggcctagtttcccctcttcttgtatatttgttttcattttttaataaaattttagagtt 301  Q
    ||||| |||||||| |||  ||||||| ||||||||||| |   | |||||||||||||||||||||||    
T  17065402 tgagggttttggcccagtcccccctctccttgtatatttttcccccttttttaataaaattttagagtt 17065334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 420
Target Start/End: Complemental strand, 37912325 - 37912250
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaagcaatgaatgagattaaa 420  Q
    ||||||||  |||||||||||||||||||||  |||||||| |||||||||||||||||||||| || ||||||||    
T  37912325 tgagaatgtgtaacttatgtgagaatggtgagaataaattgtagtcatcggattaaaagcaatggattagattaaa 37912250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 346 - 420
Target Start/End: Complemental strand, 3322881 - 3322807
Alignment:
Q  346 gagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaagcaatgaatgagattaaa 420  Q
    |||||||| |||||||||||||||||||||| |||| || |||||||  |||||||| |||||||||||||||||    
T  3322881 gagaatggttaacttatgtgagaatggtgaaaataatttccagtcattagattaaaaacaatgaatgagattaaa 3322807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 420
Target Start/End: Original strand, 30517133 - 30517208
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaagcaatgaatgagattaaa 420  Q
    ||||||||  ||| ||||||||||||| |||  ||||||||||| |||||||||||||| |||| || ||||||||    
T  30517133 tgagaatgagtaatttatgtgagaatgatgagaataaattgcagccatcggattaaaagtaatggattagattaaa 30517208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 239 - 312
Target Start/End: Complemental strand, 40926596 - 40926524
Alignment:
Q  239 ttttggcctagtttcccctcttcttgtatatttgttttcattttttaataaaattttagagtttggcggcatag 312  Q
    |||||||||| |  ||||||||||||||||| | ||| | ||||||||| |||||||| |||||||||||||||    
T  40926596 ttttggcctaatcccccctcttcttgtatatatttttcccttttttaat-aaattttatagtttggcggcatag 40926524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 301
Target Start/End: Original strand, 30418911 - 30418981
Alignment:
Q  233 tgaggtttttggcctagtttcccctcttcttgtatatttgttttca--ttttttaataaaattttagagtt 301  Q
    ||||| ||||||||||||  ||||||  ||||||||||| |||||   |||||||||||||||||||||||    
T  30418911 tgagggttttggcctagtcccccctccccttgtatattttttttccctttttttaataaaattttagagtt 30418981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 312
Target Start/End: Original strand, 17151236 - 17151310
Alignment:
Q  239 ttttggcctagtttcccctcttcttgtatatttgttttcatttttt--aataaaattttagagtttggcggcatag 312  Q
    |||| |||||||  || |||||||||||||| | ||||| ||||||  |||||||||| |||||||||||||||||    
T  17151236 tttttgcctagtcccctctcttcttgtatatattttttccttttttttaataaaattt-agagtttggcggcatag 17151310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 227 - 312
Target Start/End: Original strand, 40790596 - 40790681
Alignment:
Q  227 ttcttatgaggtttttggcctagtttcccctcttcttgtatatttgttttcattttttaataaaattttagagtttggcggcatag 312  Q
    ||||| ||||| ||||||||||||  ||||||||||||||| | | ||| | |||||||||||||||||||| |||| ||||||||    
T  40790596 ttcttctgaggattttggcctagtcccccctcttcttgtatgtatttttcctttttttaataaaattttagaatttgacggcatag 40790681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 2779722 - 2779779
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaa 402  Q
    |||||||| ||||||||||||||||||||||  |||||||||||  ||||||||||||    
T  2779722 tgagaatgactaacttatgtgagaatggtgagaataaattgcagctatcggattaaaa 2779779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 260 - 311
Target Start/End: Complemental strand, 26954066 - 26954015
Alignment:
Q  260 tcttgtatatttgttttcattttttaataaaattttagagtttggcggcata 311  Q
    |||||||||| | ||| | |||||||||||||||||||||||||||||||||    
T  26954066 tcttgtatatgtttttcctttttttaataaaattttagagtttggcggcata 26954015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 2780341 - 2780284
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaa 402  Q
    ||||||||| |||||||||||||||||||||  ||||||| ||| |||| ||||||||    
T  2780341 tgagaatggttaacttatgtgagaatggtgagaataaattacagccatcagattaaaa 2780284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 420
Target Start/End: Complemental strand, 7726533 - 7726458
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaagcaatgaatgagattaaa 420  Q
    ||||||||| || ||||||||||||||||||  ||||||| ||  | || ||||||||||||||  ||||||||||    
T  7726533 tgagaatgggtatcttatgtgagaatggtgagaataaattacacccgtcagattaaaagcaatgggtgagattaaa 7726458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Original strand, 18517660 - 18517693
Alignment:
Q  279 ttttttaataaaattttagagtttggcggcatag 312  Q
    ||||||||||||||||||||||||| ||||||||    
T  18517660 ttttttaataaaattttagagtttgacggcatag 18517693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Original strand, 51661662 - 51661695
Alignment:
Q  279 ttttttaataaaattttagagtttggcggcatag 312  Q
    ||||||||||||||||||||||||| ||||||||    
T  51661662 ttttttaataaaattttagagtttgacggcatag 51661695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 303
Target Start/End: Original strand, 10997363 - 10997433
Alignment:
Q  234 gaggtttttggcctagtttcccctcttcttgtatatttgttttca--ttttttaataaaattttagagtttg 303  Q
    |||| ||||||||||||  ||||||||||| ||||||| |||||   |||||| ||||||||||||||||||    
T  10997363 gagggttttggcctagtc-cccctcttcttttatattttttttccctttttttgataaaattttagagtttg 10997433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 52639 - 52716
Alignment:
Q  227 ttcttatgaggtttttggcctagtttcccctcttcttgtatatttgttttcattttttaataaaattttagagtttgg 304  Q
    ||||| ||||| ||||||||||||  |||||||| |||||||| | ||| | |||||||||||||||||| |||||||    
T  52639 ttcttctgagggttttggcctagtcccccctctttttgtatatatttttcctttttttaataaaattttaaagtttgg 52716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 402
Target Start/End: Complemental strand, 1469076 - 1469019
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaa 402  Q
    |||||||| ||||||||||||||||||||||  |||||||||||  ||||||||||||    
T  1469076 tgagaatgactaacttatgtgagaatggtgagaataaattgcagctatcggattaaaa 1469019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 420
Target Start/End: Complemental strand, 33671019 - 33670945
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaagcaatgaatgagattaaa 420  Q
    ||||||||  |||||||| ||||||||||||  ||||||||||| || |||||||||||||||| || ||||||||    
T  33671019 tgagaatgagtaacttat-tgagaatggtgagaataaattgcagccaccggattaaaagcaatggattagattaaa 33670945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 312
Target Start/End: Original strand, 1633286 - 1633319
Alignment:
Q  279 ttttttaataaaattttagagtttggcggcatag 312  Q
    ||||||||||||||||||||||||||||||||||    
T  1633286 ttttttaataaaattttagagtttggcggcatag 1633319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 301
Target Start/End: Complemental strand, 15468398 - 15468330
Alignment:
Q  233 tgaggtttttggcctagtttcccctcttcttgtatatttgttttcattttttaataaaattttagagtt 301  Q
    ||||| ||||||||||||  ||||||| ||||||||||| |   | |||||||||||||||||||||||    
T  15468398 tgagggttttggcctagtcccccctctccttgtatatttttcccccttttttaataaaattttagagtt 15468330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 30460272 - 30460221
Alignment:
Q  257 tcttcttgtatatttgttttcatttttt-aataaaattttagagtttggcgg 307  Q
    ||||||||| ||| | |||||||||||| |||||||||||||||||||||||    
T  30460272 tcttcttgtgtatattttttcatttttttaataaaattttagagtttggcgg 30460221  T

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Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 402
Target Start/End: Original strand, 1468453 - 1468510
Alignment:
Q  345 tgagaatggctaacttatgtgagaatggtgaagataaattgcagtcatcggattaaaa 402  Q
    ||||||||| |||||||||||||||||||||  ||||||| ||  |||| ||||||||    
T  1468453 tgagaatggttaacttatgtgagaatggtgagaataaattacaaccatcagattaaaa 1468510  T

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Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Complemental strand, 9411309 - 9411276
Alignment:
Q  279 ttttttaataaaattttagagtttggcggcatag 312  Q
    ||||||||||| ||||||||||||||||||||||    
T  9411309 ttttttaataatattttagagtttggcggcatag 9411276  T

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Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 279 - 307
Target Start/End: Complemental strand, 4463527 - 4463499
Alignment:
Q  279 ttttttaataaaattttagagtttggcgg 307  Q
    |||||||||||||||||||||||||||||    
T  4463527 ttttttaataaaattttagagtttggcgg 4463499  T

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Target: scaffold0195 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 312
Target Start/End: Complemental strand, 9131 - 9049
Alignment:
Q  227 ttcttatgaggtttttggcctagtttcccctcttcttgtatatttgttttcattttttaataaaattttagagtttggcggcatag 312  Q
    ||||| ||||| ||||||||||||  ||||||||   |||||| | ||| | ||||||||||||||||||||||||| ||||||||    
T  9131 ttcttctgagggttttggcctagtcccccctctt---gtatatatttttcctttttttaataaaattttagagtttgacggcatag 9049  T

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Target: scaffold0195; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 312
Target Start/End: Complemental strand, 14520 - 14438
Alignment:
Q  227 ttcttatgaggtttttggcctagtttcccctcttcttgtatatttgttttcattttttaataaaattttagagtttggcggcatag 312  Q
    ||||| ||||| ||||||||||||  ||||||||   |||||| | ||| | ||||||||||||||||||||||||| ||||||||    
T  14520 ttcttctgagggttttggcctagtcccccctctt---gtatatatttttcctttttttaataaaattttagagtttgacggcatag 14438  T

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Target: scaffold0176 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 312
Target Start/End: Original strand, 26381 - 26467
Alignment:
Q  227 ttcttatgaggtttttggcctagtttcccctcttcttgtatat-ttgttttcattttttaataaaattttagagtttggcggcatag 312  Q
    ||||| ||||| ||||||||||||  ||||||||||||||||| || ||  |||||||| |||| ||||||||||||| ||| ||||    
T  26381 ttcttctgagggttttggcctagtcccccctcttcttgtatatctttttcccattttttgataatattttagagtttgacggtatag 26467  T

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Target: scaffold0911 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0911
Description:

Target: scaffold0911; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 312
Target Start/End: Complemental strand, 2315 - 2282
Alignment:
Q  279 ttttttaataaaattttagagtttggcggcatag 312  Q
    ||||||||||||||||||||||||||||||||||    
T  2315 ttttttaataaaattttagagtttggcggcatag 2282  T

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Target: scaffold0291 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 279 - 312
Target Start/End: Complemental strand, 15646 - 15613
Alignment:
Q  279 ttttttaataaaattttagagtttggcggcatag 312  Q
    ||||||||||||||||||||||||||||||||||    
T  15646 ttttttaataaaattttagagtttggcggcatag 15613  T

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Target: scaffold0437 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0437
Description:

Target: scaffold0437; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 312
Target Start/End: Original strand, 11350 - 11429
Alignment:
Q  234 gaggtttttggcctagtttcccctcttcttgtatatttgttttcatttt-ttaataaaattttagagtttggcggcatag 312  Q
    |||| ||||||||||||  |||||||||||||| | || ||| | |||| |||||||| |||||||| ||||||||||||    
T  11350 gagggttttggcctagtcccccctcttcttgtacagttttttccctttttttaataaagttttagagattggcggcatag 11429  T

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