View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19212_high_15 (Length: 283)

Name: NF19212_high_15
Description: NF19212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19212_high_15
NF19212_high_15
[»] chr7 (1 HSPs)
chr7 (1-283)||(44838268-44838550)


Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 44838268 - 44838550
Alignment:
Q  1 ctcttattattccttctgttgacatcttttgacgttgttccaaatttgaagaagctttagtattgattgtgttattcctgttgaatctgcttccatgatt 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44838268 ctcttattattccttctgttgacatcttttgatgttgttccaaatttgaagaagctttagtattgattgtgttattcctgttgaatctgcttccatgatt 44838367  T
Q  101 tctcagaatctccaaggatgatagatattgtggcatcttctgaatattgttttctaaaggttttggaattggaactttgtggtgaagattcttttgttga 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44838368 tctcagaatctccaaggatgatagatattgtggcatcttctgaatattgttttctaaaggttttggaattggaactttgtggtgaagattcttttgttga 44838467  T
Q  201 tcagtttctaagttgatattgatatcttctaataatgacatgaaattacaaacttcgaattcttgttgttgttgatgatgatg 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44838468 tcagtttctaagttgatattgatatcttctaataatgacatgaaattacaaacttcgaattcttgttgttgttgatgatgatg 44838550  T

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