View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19212_low_12 (Length: 334)
Name: NF19212_low_12
Description: NF19212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19212_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 1 - 333
Target Start/End: Original strand, 10865507 - 10865839
Alignment:
| Q |
1 |
gggtggtgaattgaataatccaaaattgattgtgttgttcctactaaagacttatatcatcaagcgtaagacatattgtatgatatacaagttgtactat |
100 |
Q |
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| T |
10865507 |
gggtggtgaattgaataatccaaaattgattgtgttgttcctactaaagacttatatcatcaagcgtaagacatattgtatgatatacaagttgtactat |
10865606 |
T |
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| Q |
101 |
aaaatatgttttctaatattctaacaagtgatatactataaacacattgagtcaaaaacaatcaaacatgtttttattcagcacacttcatatactataa |
200 |
Q |
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| T |
10865607 |
aaaatatgttttctaatattctaacaagtgatatactataaacacgttgagtcaaaaacaatcaaacatgtttttattcagcacacttcatatactataa |
10865706 |
T |
|
| Q |
201 |
aactactaattagtttctatgaacagcagaaaaaatatatagtttaattagtattattgtttagtcaaataaaggcttctagtgatgatgtaatgttagc |
300 |
Q |
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| T |
10865707 |
aactactaattagtttctatgaacagcagaaaaaatatatagtttaattagtattattgtttagtcaaataaaggcttctagtgatgatgtaatgttagc |
10865806 |
T |
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| Q |
301 |
atctctccacaaaatatgttgttattttggagt |
333 |
Q |
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| T |
10865807 |
atctctccacaaaatatgttgttattttggagt |
10865839 |
T |
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