View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19213_high_10 (Length: 292)
Name: NF19213_high_10
Description: NF19213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19213_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 18 - 278
Target Start/End: Original strand, 10738398 - 10738658
Alignment:
| Q |
18 |
attatttatgaaaaagtgggtgagaaaataaatacctctattcataaacaatcatgcatgcattatctaaacaatttgtaggtattaaatcaaatcaaca |
117 |
Q |
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| T |
10738398 |
attattaatgaaaaagtgggtgagaaaataaatacctctattcataaacaatcatgcatgcattatctaaacaatttgtaggtattaaatcaaatcaaca |
10738497 |
T |
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| Q |
118 |
tgcatgattaatgattagaatatatagtttgcacctactaaattgtttatttttggattattatcaacacttgcagagaagagtgagttttatgccaatc |
217 |
Q |
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| T |
10738498 |
tgcatgattaatgattagaatatatagtttgaacctactaaattgtttatttttggattattatcaacacttgcagagaagagtgagttttatgccaatc |
10738597 |
T |
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| Q |
218 |
aatgaaggaagttgttcgatatctgtagcttcctaaccttgaagctaaacttggaaccctc |
278 |
Q |
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| T |
10738598 |
aatgaaggaagttgttcgatatctgtagcttcctaaccttgaagctaaacttggaaccctc |
10738658 |
T |
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