View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19213_high_17 (Length: 250)
Name: NF19213_high_17
Description: NF19213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19213_high_17 |
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Alignment Details
Target: chr1 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 8 - 155
Target Start/End: Complemental strand, 10739373 - 10739226
Alignment:
| Q |
8 |
gagatgaataagagtaagataagatatgaatcaagatagattttatcctaacctatgtatgagtatggtaagatattatttgttctaatgttttatgcat |
107 |
Q |
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| T |
10739373 |
gagaagaataagagtaagataagatataaatcaagttagattttatcctaacctatgtatgagtatggtaagatattatttgttctaatgttttatgcat |
10739274 |
T |
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| Q |
108 |
ctaataatttgtgggacaatattttatactccttccatcacaagatat |
155 |
Q |
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| T |
10739273 |
ctaataatttgtgggacaatattttatactccttccatcacaagatat |
10739226 |
T |
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