View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19213_low_1 (Length: 632)

Name: NF19213_low_1
Description: NF19213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19213_low_1
NF19213_low_1
[»] chr7 (2 HSPs)
chr7 (1-448)||(3087071-3087518)
chr7 (495-632)||(3087598-3087735)
[»] chr6 (17 HSPs)
chr6 (1-253)||(4299050-4299302)
chr6 (1-249)||(4622791-4623039)
chr6 (1-102)||(4259534-4259635)
chr6 (20-253)||(4626621-4626854)
chr6 (1-89)||(4602443-4602531)
chr6 (1-118)||(4255985-4256105)
chr6 (181-249)||(4557956-4558024)
chr6 (63-249)||(4586349-4586535)
chr6 (492-573)||(4623136-4623217)
chr6 (197-243)||(4612957-4613003)
chr6 (64-123)||(3172455-3172514)
chr6 (26-89)||(4266559-4266622)
chr6 (192-249)||(4571814-4571871)
chr6 (26-114)||(4514489-4514577)
chr6 (41-89)||(4561195-4561243)
chr6 (41-89)||(4574999-4575047)
chr6 (191-243)||(4599011-4599063)
[»] chr5 (2 HSPs)
chr5 (1-111)||(24107026-24107136)
chr5 (26-89)||(24103675-24103738)
[»] scaffold0477 (2 HSPs)
scaffold0477 (1-132)||(4039-4170)
scaffold0477 (200-241)||(3930-3971)
[»] chr8 (2 HSPs)
chr8 (181-249)||(16685519-16685587)
chr8 (20-155)||(20863170-20863305)
[»] scaffold0288 (1 HSPs)
scaffold0288 (13-123)||(3077-3187)


Alignment Details
Target: chr7 (Bit Score: 356; Significance: 0; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 1 - 448
Target Start/End: Original strand, 3087071 - 3087518
Alignment:
Q  1 ttgatttagtagtgaaggtaaaggtccaatggtatataatgaagggaacacagaatatagcgcattcattacatcactctcaagttcatcataagtgtta 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3087071 ttgatttagtagtgaaggtaatggtccaatggtatataatgaagggaacacagaatatagcgcattcattacatcactctcaagttcatcataagtgtta 3087170  T
Q  101 aagataatagcagaggctttgtgtaagctatcccccacttcaatgacaaattctaaaatgggatcttttcgatcttcaacccttattatgtcaggcagat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3087171 aagataatagcagaggctttgtgtaagctatcccccacttcaatgacaaattctaaaatgggatcttttcgatcttcaacccttattatgtcaggcagat 3087270  T
Q  201 ccttcagtcgaaagttctgcaatcctggaatacagtctactttggtgtc-taaaatctcatctgcttgtcataattatagaagaagtcaatagcttacta 299  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||  ||| |||||| |||||||||||||||||||||||||||||||||| |||    
T  3087271 ccttcagtcgaaagttctgcaatcctggaatacagtctactctggcgtcagaaactctcatatgcttgtcataattatagaagaagtcaatagcttgcta 3087370  T
Q  300 ggaatacactctctaacgctttctaacacacnnnnnnnattggttaacatttatgagtctcgtcaaattatgtgggactcatgaatgtaaatcagaaaga 399  Q
    ||||||||||||| |||||||||||||||||       | ||||| |||||||||||| |||| |||||||||||||||||||||||| |||||||||||    
T  3087371 ggaatacactctc-aacgctttctaacacacttttttcactggtttacatttatgagtttcgttaaattatgtgggactcatgaatgttaatcagaaaga 3087469  T
Q  400 gtgtgttgaaaagtgtttgacaaagagttcgttactaatattattcata 448  Q
    ||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  3087470 gtgcgttgaaaagtgtttgacaaagagtttgttactaatattattcata 3087518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 495 - 632
Target Start/End: Original strand, 3087598 - 3087735
Alignment:
Q  495 aatgactcattatcaatattaaattttatcaatccaaccgtcaaattaaaagttctcattgagtatatctactcgacaacttgctataaagtctttaaac 594  Q
    ||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||| ||||||||| ||||| ||||    
T  3087598 aatgactcatt-tcgatattaaattttatcaatccaaccgtcgaattaaaagttctcattaagtatatcaactcgacaaattgctataaggtcttcaaac 3087696  T
Q  595 taaatt-tcctttatgaaacaaatttgaacgaacatact 632  Q
    |||||| | ||||||||||||||||  ||||||||||||    
T  3087697 taaattatactttatgaaacaaattcaaacgaacatact 3087735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 2e-54; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 4299302 - 4299050
Alignment:
Q  1 ttgatttagtagtgaaggtaaaggtccaatggtatataatgaagggaacacagaatatagcgcattcattacatcactctcaagttcatcataagtgtta 100  Q
    |||||||| || |||||||||||||||||| |||||||| |||||||||| |||||| || ||||||||||||||||||||||||||||||||||| |||    
T  4299302 ttgatttaataatgaaggtaaaggtccaatagtatataaagaagggaacatagaatagagagcattcattacatcactctcaagttcatcataagtatta 4299203  T
Q  101 aagataatagcagaggctttgtgtaagctatcccccacttcaatgacaaattctaaaatgggatcttttcgatcttcaacccttattatgtcaggcagat 200  Q
    || | ||||||||| |||||||| || |||||  || |||||||| |||||||||  |||  ||| ||| ||| |  |  |||||| | |||||  ||||    
T  4299202 aaaacaatagcagatgctttgtgaaatctatctgccgcttcaatggcaaattctaccatgacatcatttggatttgtactccttataaagtcagttagat 4299103  T
Q  201 ccttcagtcgaaagttctgcaatcctggaatacagtctactttggtgtctaaa 253  Q
    | |||| |||||||||||||||||||||||||||||||| |||| ||||||||    
T  4299102 ctttcaatcgaaagttctgcaatcctggaatacagtctagtttgatgtctaaa 4299050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 4622791 - 4623039
Alignment:
Q  1 ttgatttagtagtgaaggtaaaggtccaatggtatataatgaagggaacacagaatatagcgcattcattacatcactctcaagttcatcataagtgtta 100  Q
    |||||||| || ||||||||||||||||| |||||| || || |||||||  ||||| |||||||||||  ||||| |||||||||||| |||||| |||    
T  4622791 ttgatttaataatgaaggtaaaggtccaacggtatacaaagatgggaacattgaatagagcgcattcatcgcatcagtctcaagttcattataagtatta 4622890  T
Q  101 aagataatagcagaggctttgtgtaagctatcccccacttcaatgacaaattctaaaatgggatcttttcgatcttcaacccttattatgtcaggcagat 200  Q
    || ||||||||||||| |||||| || |  ||  || ||||||||| ||||||||  |||  ||| ||| | |||  || |||||| | |||||||| ||    
T  4622891 aaaataatagcagaggatttgtgaaatcgttctgccgcttcaatgagaaattctaccatgacatcatttggctctgtaatccttataaagtcaggcaaat 4622990  T
Q  201 ccttcagtcgaaagttctgcaatcctggaatacagtctactttggtgtc 249  Q
    |||| |  |||||||||| |||||| |||| ||||||||||| ||||||    
T  4622991 cctttaaccgaaagttcttcaatccaggaacacagtctacttcggtgtc 4623039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 4259635 - 4259534
Alignment:
Q  1 ttgatttagtagtgaaggtaaaggtccaatggtatataatgaagggaacacagaatatagcgcattcattacatcactctcaagttcatcataagtgtta 100  Q
    |||||||| || |||||||||||||||||| | |||||| |||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  4259635 ttgatttaataatgaaggtaaaggtccaatagcatataaagaagggaacatagaatagagcacattcattacatcactctcaagttcatcataagtgtta 4259536  T
Q  101 aa 102  Q
    ||    
T  4259535 aa 4259534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 20 - 253
Target Start/End: Original strand, 4626621 - 4626854
Alignment:
Q  20 aaaggtccaatggtatataatgaagggaacacagaatatagcgcattcattacatcactctcaagttcatcataagtgttaaagataatagcagaggctt 119  Q
    |||||||||||||||||||  ||| |||||  |||||| ||||||||||||||||||| |||||||||||| |||||||| || | |||||| || |||     
T  4626621 aaaggtccaatggtatatacagaaaggaacgtagaatagagcgcattcattacatcaccctcaagttcatcgtaagtgttgaaaacaatagccgatgctc 4626720  T
Q  120 tgtgtaagctatcccccacttcaatgacaaattctaaaatgggatcttttcgatcttcaacccttattatgtcaggcagatccttcagtcgaaagttctg 219  Q
    |||| || |||||  || ||||||||| ||||||||  |||  ||| ||  ||| |     |||||| | || | | || |||||||| |||||||||||    
T  4626721 tgtgaaatctatctgccgcttcaatgagaaattctaccatgacatcattaggatttgttgtccttataaagttaagaaggtccttcagccgaaagttctg 4626820  T
Q  220 caatcctggaatacagtctactttggtgtctaaa 253  Q
    |||||| |||||||| |||| |||||||||||||    
T  4626821 caatccgggaatacaatctagtttggtgtctaaa 4626854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 4602443 - 4602531
Alignment:
Q  1 ttgatttagtagtgaaggtaaaggtccaatggtatataatgaagggaacacagaatatagcgcattcattacatcactctcaagttcat 89  Q
    |||||||| || |||| | |||||||| || |||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  4602443 ttgatttaataatgaatgcaaaggtccgatagtatataaagaagggaacatagaatatagtgcattcattacatcactctcaagttcat 4602531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 4256105 - 4255985
Alignment:
Q  1 ttgatttagtagtgaaggtaaaggtccaatggtatataatgaagggaacacagaatat---agcgcattcattacatcactctcaagttcatcataagtg 97  Q
    |||||||| || |||||||||||||||||||||||| ||  ||| ||||| ||||||    || ||||||| |||||| ||||||||||||| |||||||    
T  4256105 ttgatttaataatgaaggtaaaggtccaatggtatacaaacaagagaacatagaataatagagagcattcaatacatcgctctcaagttcattataagtg 4256006  T
Q  98 ttaaagataatagcagaggct 118  Q
    ||||| | |||||||||||||    
T  4256005 ttaaaaacaatagcagaggct 4255985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 4557956 - 4558024
Alignment:
Q  181 ccttattatgtcaggcagatccttcagtcgaaagttctgcaatcctggaatacagtctactttggtgtc 249  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||    
T  4557956 ccttataaagtcaggcagatccttcagtcgaaagttctgcaatcctggaatacaatccactttagtgtc 4558024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 63 - 249
Target Start/End: Original strand, 4586349 - 4586535
Alignment:
Q  63 cattcattacatcactctcaagttcatcataagtgttaaagataatagcagaggctttgtgtaagctatccc--ccacttcaatgacaaattctaaaatg 160  Q
    |||| ||||||||  |||||||||||||| |||| ||||| |||| ||||||| |||||||  |||  | ||  |  ||||||||| ||||||||  ||     
T  4586349 catttattacatccttctcaagttcatcagaagtattaaaaataaaagcagagtctttgtg--agccgttcctgcgccttcaatgataaattctatgatc 4586446  T
Q  161 ggatcttttcgatcttcaacccttattatgtcaggcagatccttcagtcgaaagttctgcaatcctggaatacagtctactttggtgtc 249  Q
    | ||| ||| ||||   || |||||| | |||||||| |||||| ||||||||||||| |||||||||||||||||| ||||| |||||    
T  4586447 gaatcatttggatcagtaatccttataaagtcaggcaaatcctttagtcgaaagttctccaatcctggaatacagtccactttagtgtc 4586535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 492 - 573
Target Start/End: Original strand, 4623136 - 4623217
Alignment:
Q  492 cttaatgactcattatcaatattaaattttatcaatccaaccgtcaaattaaaagttctcattgagtatatctactcgacaa 573  Q
    |||||| ||||||| | || || | ||||||||||||||||||||||||||||| |||| |||||||||||| |||| ||||    
T  4623136 cttaataactcattgtaaacatcagattttatcaatccaaccgtcaaattaaaaattcttattgagtatatcaactcaacaa 4623217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 4613003 - 4612957
Alignment:
Q  197 agatccttcagtcgaaagttctgcaatcctggaatacagtctacttt 243  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||    
T  4613003 agatccttcagtcgaaagttctgcaatccttgaatacagtccacttt 4612957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 3172455 - 3172514
Alignment:
Q  64 attcattacatcactctcaagttcatcataagtgttaaagataatagcagaggctttgtg 123  Q
    |||||| ||||||||||||||||||| | ||||||| || | ||||||||| ||||||||    
T  3172455 attcataacatcactctcaagttcattagaagtgttgaaaacaatagcagaagctttgtg 3172514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 4266622 - 4266559
Alignment:
Q  26 ccaatggtatataatgaagggaacacagaatatagcgcattcattacatcactctcaagttcat 89  Q
    |||||||| ||||  |||||||||| ||| || || |||||||| |||||||||||||||||||    
T  4266622 ccaatggtgtatatagaagggaacatagagtagagagcattcataacatcactctcaagttcat 4266559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 4571814 - 4571871
Alignment:
Q  192 caggcagatccttcagtcgaaagttctgcaatcctggaatacagtctactttggtgtc 249  Q
    |||||| |||| ||||||||||||||| || |||||| |||||||| ||||| |||||    
T  4571814 caggcaaatccctcagtcgaaagttcttcagtcctggcatacagtccactttagtgtc 4571871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 4514577 - 4514489
Alignment:
Q  26 ccaatggtatataatgaagggaacacagaatatagcgcattcattacatcactctcaagttcatcataagtgttaaagataatagcaga 114  Q
    |||||||| ||||  ||||||| || |||||| || |||||||| |||||||||||||| |||| | |||| || || | |||||||||    
T  4514577 ccaatggtgtatagagaagggagcatagaataaagagcattcataacatcactctcaagatcattagaagtatttaaaaaaatagcaga 4514489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 4561195 - 4561243
Alignment:
Q  41 gaagggaacacagaatatagcgcattcattacatcactctcaagttcat 89  Q
    |||||||||| |||||| |  |||||||| |||||||||||||||||||    
T  4561195 gaagggaacatagaatagaaagcattcataacatcactctcaagttcat 4561243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 4574999 - 4575047
Alignment:
Q  41 gaagggaacacagaatatagcgcattcattacatcactctcaagttcat 89  Q
    |||||||||| |||||| |  |||||||| |||||||||||||||||||    
T  4574999 gaagggaacatagaatagaaagcattcataacatcactctcaagttcat 4575047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 4599011 - 4599063
Alignment:
Q  191 tcaggcagatccttcagtcgaaagttctgcaatcctggaatacagtctacttt 243  Q
    ||||| ||||| |||||||||||||| |||| ||| |||||||| ||||||||    
T  4599011 tcaggaagatctttcagtcgaaagttttgcagtccaggaatacaatctacttt 4599063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 24107026 - 24107136
Alignment:
Q  1 ttgatttagtagtgaaggtaaaggtccaatggtatataatgaagggaacacagaatatagcgcattcattacatcactctcaagttcatcataagtgtta 100  Q
    |||||||| || |||||||||||||||||| ||||||||  ||||||||| |||||| |||| |||||||||||||||||||||||||||||||| ||||    
T  24107026 ttgatttaataatgaaggtaaaggtccaatagtatataaaaaagggaacatagaatagagcgtattcattacatcactctcaagttcatcataagcgtta 24107125  T
Q  101 aagataatagc 111  Q
    || | ||||||    
T  24107126 aaaacaatagc 24107136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 24103675 - 24103738
Alignment:
Q  26 ccaatggtatataatgaagggaacacagaatatagcgcattcattacatcactctcaagttcat 89  Q
    |||||||| ||||  |||||||||| ||| || || |||||||| |||||||||||||||||||    
T  24103675 ccaatggtgtatatagaagggaacatagagtagagagcattcataacatcactctcaagttcat 24103738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 60; Significance: 3e-25; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 4170 - 4039
Alignment:
Q  1 ttgatttagtagtgaaggtaaaggtccaatggtatataatgaagggaacacagaatatagcgcattcattacatcactctcaagttcatcataagtgtta 100  Q
    |||||||| || ||||| ||||||||||||||||||||| |||||||||| |||||| || ||||||| |||| | |||||||||||||| ||||||||     
T  4170 ttgatttaataatgaagttaaaggtccaatggtatataaagaagggaacatagaatagagagcattcaatacaccgctctcaagttcatcgtaagtgttg 4071  T
Q  101 aagataatagcagaggctttgtgtaagctatc 132  Q
    || | |||||  ||||||||||| || |||||    
T  4070 aaaacaatagtcgaggctttgtggaatctatc 4039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 200 - 241
Target Start/End: Complemental strand, 3971 - 3930
Alignment:
Q  200 tccttcagtcgaaagttctgcaatcctggaatacagtctact 241  Q
    |||||||| ||||||||||||||||||||||||| |||||||    
T  3971 tccttcagccgaaagttctgcaatcctggaataccgtctact 3930  T

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Target: chr8 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 16685587 - 16685519
Alignment:
Q  181 ccttattatgtcaggcagatccttcagtcgaaagttctgcaatcctggaatacagtctactttggtgtc 249  Q
    |||||| | |||||||||||||||||||||||  ||||||||||||||||||||||| ||||| |||||    
T  16685587 ccttataaagtcaggcagatccttcagtcgaatattctgcaatcctggaatacagtccactttagtgtc 16685519  T

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Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 155
Target Start/End: Complemental strand, 20863305 - 20863170
Alignment:
Q  20 aaaggtccaatggtatataatgaagggaacacagaatatagcgcattcattacatcactctcaagttcatcataagtgttaaagataatagcagaggctt 119  Q
    ||||| |||||||| ||||  |||||||||| |||||| ||  ||||||| |||||||||||||| ||||   |||| || || | |||||||||||||     
T  20863305 aaagggccaatggtgtatagagaagggaacatagaatagagaacattcataacatcactctcaagctcattgaaagtattgaaaacaatagcagaggctc 20863206  T
Q  120 tgtgtaagctatcccccacttcaatgacaaattcta 155  Q
    |||| || |||||  | |||||||||| ||||||||    
T  20863205 tgtgaaatctatctactacttcaatgagaaattcta 20863170  T

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Target: scaffold0288 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 3187 - 3077
Alignment:
Q  13 tgaaggtaaaggtccaatggtatataatgaagggaacacagaatatagcgcattcattacatcactctcaagttcatcataagtgttaaagataatagca 112  Q
    ||||||||| ||||| ||  | |||||||| ||||||| ||| |  |||||||||| |||||||||||||||||||| |||||||||||| | ||| |||    
T  3187 tgaaggtaatggtccgatactgtataatgatgggaacatagagtggagcgcattcagtacatcactctcaagttcattataagtgttaaaaacaattgca 3088  T
Q  113 gaggctttgtg 123  Q
    || ||| ||||    
T  3087 gaagctctgtg 3077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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