View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19213_low_19 (Length: 243)
Name: NF19213_low_19
Description: NF19213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19213_low_19 |
 | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 3086832 - 3086612
Alignment:
| Q |
1 |
ctgagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||| |
|
|
| T |
3086832 |
ctgagtttgagaaagaaatttcagatagaggtctaatcgcaagctggtgtccgcaagagcaagtattgaatcacccttcaattggtggattcttgactca |
3086733 |
T |
|
| Q |
101 |
ttgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgc |
200 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
3086732 |
ttgtggatggaactcaacggttgaaagcgtacttgctggagtgccaatgttgtgttggccattttatggagatcaaccaataaactgtagatatatctgc |
3086633 |
T |
|
| Q |
201 |
aatatatgggagattggaatt |
221 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
3086632 |
aatatatgggagattggaatt |
3086612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 130; Significance: 2e-67; HSPs: 31)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 4461535 - 4461318
Alignment:
| Q |
1 |
ctgagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtca |
100 |
Q |
| |
|
||||||||| ||| ||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
4461535 |
ctgagtttgtgaatgaaatttcagatagaggcctaatagcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgactca |
4461436 |
T |
|
| Q |
101 |
ttgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgc |
200 |
Q |
| |
|
|||||||||||| |||||| |||||||||| |||||||||||| |||||||||||||| || | ||||||||| ||| ||||||||||| ||| ||| |
|
|
| T |
4461435 |
ttgtggatggaattcaaccactgaaagcatatgtgctggagtgccgatgttgtgttggccattctttggtgatcagccagcaaactgtagatttatttgc |
4461336 |
T |
|
| Q |
201 |
aatatatgggagattgga |
218 |
Q |
| |
|
|| | ||||||||||||| |
|
|
| T |
4461335 |
aacaaatgggagattgga |
4461318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 3 - 220
Target Start/End: Complemental strand, 4626361 - 4626144
Alignment:
| Q |
3 |
gagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcatt |
102 |
Q |
| |
|
||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| | ||||| |
|
|
| T |
4626361 |
gagtttgagaatgaaatttcagatagaggcctaatcgcaagctggtgtccgcaagagaaagtactgaaccatccttcaattggtggattcttaactcatt |
4626262 |
T |
|
| Q |
103 |
gtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaa |
202 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||| |||||| |||||||||| || || |||||| |||| ||| ||||||||||| ||||| |
|
|
| T |
4626261 |
gtggatggaactcaaccattgaaagcatatgcgctggagttccaatgctgtgttggccaaattttgctgatcagccaacaaattgtagatatatttgcaa |
4626162 |
T |
|
| Q |
203 |
tatatgggagattggaat |
220 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
4626161 |
tgaatgggagattggaat |
4626144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 15 - 217
Target Start/End: Complemental strand, 4557523 - 4557321
Alignment:
| Q |
15 |
gaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgtggatggaact |
114 |
Q |
| |
|
||||||||||||||||| | |||||| ||||||| ||||||||||||||| | ||||| |||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4557523 |
gaaatttcagatagaggcctaatcgcgggctggtgcccgcaagagcaagtattaaaccatccttcaattggtggattcttgactcattgtggatggaact |
4557424 |
T |
|
| Q |
115 |
caaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaatatatgggagat |
214 |
Q |
| |
|
||||| |||||||||| ||||||||| ||||||||||||||||| |||| || |||||| ||| |||||| |||||||| ||||||| ||||||||| |
|
|
| T |
4557423 |
caaccactgaaagcatatctgctggagttccaatgttgtgttggccattttttgctgatcagccagcaaactgcagatatatttgcaatacatgggagat |
4557324 |
T |
|
| Q |
215 |
tgg |
217 |
Q |
| |
|
||| |
|
|
| T |
4557323 |
tgg |
4557321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 4586048 - 4585832
Alignment:
| Q |
1 |
ctgagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtca |
100 |
Q |
| |
|
|||||||| |||| ||||||||||||||||| | |||||| | ||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||| |
|
|
| T |
4586048 |
ctgagtttaagaatgaaatttcagatagaggcctaatcgcgggttggtgcccgcaagagcaagtattgaaccacccttcaattggtggattcttgactca |
4585949 |
T |
|
| Q |
101 |
ttgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgc |
200 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| || || |||||| |||| |||||||||| ||| ||| |
|
|
| T |
4585948 |
ctgtggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattcattgctgatcagccaacaaactgtagaattatttgc |
4585849 |
T |
|
| Q |
201 |
aatatatgggagattgg |
217 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
4585848 |
aatgaatgggagattgg |
4585832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 4622554 - 4622335
Alignment:
| Q |
1 |
ctgagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtca |
100 |
Q |
| |
|
||||||||||||| |||||||||| |||||| | ||||||| | |||||||| |||||| ||||||| ||||||||| |||||||||||||||||| ||| |
|
|
| T |
4622554 |
ctgagtttgagaatgaaatttcaggtagaggcctaatcgcaggttggtgtccacaagaggaagtacttaaccaccctgcaattggtggattcttgactca |
4622455 |
T |
|
| Q |
101 |
ttgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgc |
200 |
Q |
| |
|
|||||||||||| |||||| ||||||||| ||||||||| ||||| |||||||||| |||| | |||||| |||| ||||||||||||||||||| |
|
|
| T |
4622454 |
ttgtggatggaattcaaccaccgaaagcatatgtgctggagtttcaatgctgtgttggccatttttcgctgatcagccaacaaactgtagatatatctgc |
4622355 |
T |
|
| Q |
201 |
aatatatgggagattggaat |
220 |
Q |
| |
|
||| ||||||||||||||| |
|
|
| T |
4622354 |
aattcatgggagattggaat |
4622335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 3 - 221
Target Start/End: Complemental strand, 4579842 - 4579624
Alignment:
| Q |
3 |
gagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcatt |
102 |
Q |
| |
|
||||||| ||| ||||||||||||||||| | ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4579842 |
gagtttgtgaatgaaatttcagatagaggcctaataacgagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgactcatt |
4579743 |
T |
|
| Q |
103 |
gtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaa |
202 |
Q |
| |
|
| ||||||||||||| | |||||||||| ||||||||| ||||||||||||||||| |||| | |||||| ||| ||| ||| |||||| | ||||| |
|
|
| T |
4579742 |
gcggatggaactcaatcactgaaagcatatctgctggagttccaatgttgtgttggccatttttcgctgatcacccagtaagctgcagatatttatgcaa |
4579643 |
T |
|
| Q |
203 |
tatatgggagattggaatt |
221 |
Q |
| |
|
|| |||| | ||||||||| |
|
|
| T |
4579642 |
tacatggaaaattggaatt |
4579624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 3 - 217
Target Start/End: Original strand, 4613440 - 4613654
Alignment:
| Q |
3 |
gagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcatt |
102 |
Q |
| |
|
||||||| ||| ||||||||||||||||| | |||||| ||||||||||| |||||||||||| | ||||||||||||||||| |||||||||| ||||| |
|
|
| T |
4613440 |
gagtttgtgaatgaaatttcagatagaggcctaatcgcgagctggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcatt |
4613539 |
T |
|
| Q |
103 |
gtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaa |
202 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||| | ||||| ||| |||||| |||||||| ||||| |
|
|
| T |
4613540 |
gtggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccatttttcgcggatcagccagcaaactgcagatatatatgcaa |
4613639 |
T |
|
| Q |
203 |
tatatgggagattgg |
217 |
Q |
| |
|
| |||||| ||||| |
|
|
| T |
4613640 |
tgaatgggaaattgg |
4613654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 4259874 - 4260094
Alignment:
| Q |
1 |
ctgagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtca |
100 |
Q |
| |
|
|||||||||||| |||||||| |||||||| | |||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| | ||| |
|
|
| T |
4259874 |
ctgagtttgagagtgaaatttcggatagaggcctaatcgcgagctggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactca |
4259973 |
T |
|
| Q |
101 |
ttgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgc |
200 |
Q |
| |
|
||| ||||||||||||||| |||||||||| ||| | ||| ||||||||||||||||| |||| || |||||| |||| ||||||||||| ||| || |
|
|
| T |
4259974 |
ttgcggatggaactcaaccattgaaagcatttgtgccgaagttccaatgttgtgttggccattttttgctgatcagccaacaaactgtagatttatttgt |
4260073 |
T |
|
| Q |
201 |
aatatatgggagattggaatt |
221 |
Q |
| |
|
|| |||||||||||||||| |
|
|
| T |
4260074 |
aacgaatgggagattggaatt |
4260094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 12 - 218
Target Start/End: Original strand, 4266897 - 4267103
Alignment:
| Q |
12 |
aaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgtggatgga |
111 |
Q |
| |
|
|||||||||||||||||||| | ||| ||||| |||||||| ||||| |||| ||||||||||||| |||||||||||||||| |||||| ||||||| |
|
|
| T |
4266897 |
aaagaaatttcagatagaggactaatagcaagttggtgtccacaagataaagtgttgaaccacccttcgattggtggattcttgactcattgcggatgga |
4266996 |
T |
|
| Q |
112 |
actcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaatatatggga |
211 |
Q |
| |
|
| |||||| |||||||||| ||||||||||||||||||||||||||| || | ||||||||| |||| ||||||||||| ||| ||| || |||||| |
|
|
| T |
4266997 |
attcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattctttggtgatcagccaacaaactgtagatttatttgctatgaatggga |
4267096 |
T |
|
| Q |
212 |
gattgga |
218 |
Q |
| |
|
||||||| |
|
|
| T |
4267097 |
gattgga |
4267103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 3 - 217
Target Start/End: Complemental strand, 4592641 - 4592427
Alignment:
| Q |
3 |
gagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcatt |
102 |
Q |
| |
|
||||||| ||| ||||||||||||||||| |||||| ||||||||||| |||||||||||| | |||||||||||||||||||||||||||| ||||| |
|
|
| T |
4592641 |
gagtttgtgaatgaaatttcagatagaggcgtaatcgcgagctggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcatt |
4592542 |
T |
|
| Q |
103 |
gtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaa |
202 |
Q |
| |
|
||||||||||||||||| |||||| ||| ||||||| | ||||||||||||||||| || | | ||||||| |||| |||||||||| ||| | ||| |
|
|
| T |
4592541 |
gtggatggaactcaaccactgaaagtatatgtgctggaattccaatgttgtgttggccattctttagtgatcagccaacaaactgtagacttatttacaa |
4592442 |
T |
|
| Q |
203 |
tatatgggagattgg |
217 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
4592441 |
tgaatgggagattgg |
4592427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 218
Target Start/End: Complemental strand, 4470199 - 4469998
Alignment:
| Q |
17 |
aatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgtggatggaactca |
116 |
Q |
| |
|
||||||||||||||| | ||||| | ||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||| |
|
|
| T |
4470199 |
aatttcagatagaggcctaatcgtgaactggtgtcctcaagagcaagtactgaaccacccttcaatcggtggattcttgactcattgcggatggaactca |
4470100 |
T |
|
| Q |
117 |
accgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaatatatgggagattg |
216 |
Q |
| |
|
||| |||||||||| |||||||||||||||||||||||||| || | ||||||||| | | ||| ||||||| ||| |||||| ||||||||||| |
|
|
| T |
4470099 |
accactgaaagcatatgcgctggagtgccaatgttgtgttggccattctttggtgatcagctagcaaattgtagatttatttgcaatgaatgggagattg |
4470000 |
T |
|
| Q |
217 |
ga |
218 |
Q |
| |
|
|| |
|
|
| T |
4469999 |
ga |
4469998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 4564123 - 4563907
Alignment:
| Q |
1 |
ctgagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtca |
100 |
Q |
| |
|
||||||||| ||| ||||||||||||||||| ||| ||||| |||||||| || ||| ||||| ||||||||||||||||||| |||||||||| ||| |
|
|
| T |
4564123 |
ctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttggtgtccacaggagaaagtattgaaccacccttcaattggcggattcttgactca |
4564024 |
T |
|
| Q |
101 |
ttgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgc |
200 |
Q |
| |
|
||| ||||||||||||||| |||||||||| ||||||||| ||||||||||||||||| || | ||||||||| |||| |||||||||| ||| | | |
|
|
| T |
4564023 |
ttgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgttgtgttggccattctttggtgatcagccaacaaactgtagacttatttac |
4563924 |
T |
|
| Q |
201 |
aatatatgggagattgg |
217 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
4563923 |
aatgaatgggagattgg |
4563907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 217
Target Start/End: Complemental strand, 4602187 - 4601985
Alignment:
| Q |
15 |
gaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgtggatggaact |
114 |
Q |
| |
|
||||||||||||||||| | ||| ||||| |||||||| |||||| |||| ||||||||||||| || || |||||||||| ||||||||||||||||| |
|
|
| T |
4602187 |
gaaatttcagatagaggcctaatagcaagttggtgtccacaagagaaagtgttgaaccacccttcgatcggcggattcttgactcattgtggatggaact |
4602088 |
T |
|
| Q |
115 |
caaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaatatatgggagat |
214 |
Q |
| |
|
||||| |||||||||| |||||||||||| ||||||||||||||||||| || ||||| |||| ||||||||||| ||| || ||| ||||||||| |
|
|
| T |
4602087 |
caaccactgaaagcatatgtgctggagtgccgatgttgtgttggcctttttttgccgatcagccaacaaactgtagatttatttgtaatgaatgggagat |
4601988 |
T |
|
| Q |
215 |
tgg |
217 |
Q |
| |
|
||| |
|
|
| T |
4601987 |
tgg |
4601985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 4514841 - 4515057
Alignment:
| Q |
1 |
ctgagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtca |
100 |
Q |
| |
|
||||||||| ||| |||||| |||||||||| | ||| ||||| |||||||| |||||| |||| ||||||||||||||||||| |||||||||| ||| |
|
|
| T |
4514841 |
ctgagtttgtgaatgaaattgcagatagaggcctaatagcaagttggtgtccacaagagaaagttttgaaccacccttcaattggcggattcttgactca |
4514940 |
T |
|
| Q |
101 |
ttgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgc |
200 |
Q |
| |
|
||| ||||||||||||||| ||| |||||| ||||||||||||||| | ||||||| || | |||||||||||||| ||||||||||| ||| ||| |
|
|
| T |
4514941 |
ttgcggatggaactcaaccactgagagcatatgcgctggagtgccaatgctttgttggcaattctttggtgatcaaccaacaaactgtagatttatttgc |
4515040 |
T |
|
| Q |
201 |
aatatatgggagattgg |
217 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
4515041 |
aatgaatgggagattgg |
4515057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 4560908 - 4560700
Alignment:
| Q |
11 |
gaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgtggatgg |
110 |
Q |
| |
|
||||||||||||||||||||| | ||| ||||| |||||||| |||||| ||||| |||||||||| ||| | ||||||||||||| |||||| |||||| |
|
|
| T |
4560908 |
gaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatgg |
4560809 |
T |
|
| Q |
111 |
aactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaatatatggg |
210 |
Q |
| |
|
||||||||| |||||||||| ||||||||| ||||||||||||||||| |||| || ||||| ||| |||||| |||||||| |||||| |||| |
|
|
| T |
4560808 |
aactcaaccactgaaagcatatgtgctggagttccaatgttgtgttggccattttttgcagatcagccagcaaactgaagatatatttgcaatgaatgga |
4560709 |
T |
|
| Q |
211 |
agattggaa |
219 |
Q |
| |
|
||||||||| |
|
|
| T |
4560708 |
agattggaa |
4560700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 220
Target Start/End: Complemental strand, 4506255 - 4506050
Alignment:
| Q |
15 |
gaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgtggatggaact |
114 |
Q |
| |
|
||||||||||||||| | | || |||||||||||| | |||||| |||| | || ||||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
4506255 |
gaaatttcagatagaagccttatagcaagctggtgttcacaagagaaagtgttaaatcacccttcaattggtggattcttgactcattgcggatggaact |
4506156 |
T |
|
| Q |
115 |
caaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaatatatgggagat |
214 |
Q |
| |
|
||||| |||||||||| ||||||||||||||| |||||||||| || | |||||||||||||| ||||||||||| ||| |||||| || |||||| |
|
|
| T |
4506155 |
caaccactgaaagcatatgcgctggagtgccaatgctgtgttggccgttctttggtgatcaaccaacaaactgtagatttatttgcaatgaattggagat |
4506056 |
T |
|
| Q |
215 |
tggaat |
220 |
Q |
| |
|
|||||| |
|
|
| T |
4506055 |
tggaat |
4506050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 220
Target Start/End: Complemental strand, 4571382 - 4571165
Alignment:
| Q |
3 |
gagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcatt |
102 |
Q |
| |
|
||||||| ||| ||||||||||||||||| | ||| || | ||||| |||||||| ||||| ||||||| |||||||||||||| ||||||| ||| | |
|
|
| T |
4571382 |
gagtttgtgaatgaaatttcagatagaggcctaattgctggttggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcact |
4571283 |
T |
|
| Q |
103 |
gtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaa |
202 |
Q |
| |
|
|||||||||||||||| ||||||||| | ||||||| ||||||||||||| ||| |||| || |||||| ||| ||||||||||||||||||||| |
|
|
| T |
4571282 |
gtggatggaactcaacgaccgaaagcatatctactggagttccaatgttgtgttagccattttttgctgatcagccagcaaactgtagatatatctgcaa |
4571183 |
T |
|
| Q |
203 |
tatatgggagattggaat |
220 |
Q |
| |
|
|| ||||||||||||||| |
|
|
| T |
4571182 |
tacatgggagattggaat |
4571165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 179
Target Start/End: Original strand, 4490085 - 4490253
Alignment:
| Q |
11 |
gaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgtggatgg |
110 |
Q |
| |
|
||||||||||||||||||||| | ||| ||||| |||||||| |||||| | ||| |||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4490085 |
gaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaggtattgaatcacccttcaattggtggattcttgactcattgtggatgg |
4490184 |
T |
|
| Q |
111 |
aactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaacca |
179 |
Q |
| |
|
||||||| | | || || ||| ||||||||||||||||||||||||||| |||| || |||||||||| |
|
|
| T |
4490185 |
aactcaatcatggagagtatatgtgctggagtgccaatgttgtgttggccattttttgctgatcaacca |
4490253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 219
Target Start/End: Complemental strand, 4574710 - 4574502
Alignment:
| Q |
11 |
gaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgtggatgg |
110 |
Q |
| |
|
||||||||||||||||||||| | ||| ||||| |||||||| |||||| ||||| ||||||||| |||| | ||||||||||||| |||||| |||||| |
|
|
| T |
4574710 |
gaaagaaatttcagatagaggactaatagcaagttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatgg |
4574611 |
T |
|
| Q |
111 |
aactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaatatatggg |
210 |
Q |
| |
|
||||||||| |||||||||| ||||||||| |||||||| |||||||| |||| | ||||| ||| |||||| |||||||| |||||| ||||| |
|
|
| T |
4574610 |
aactcaaccactgaaagcatatgtgctggagttccaatgttatgttggccatttttttcggatcagccagcaaactgcagatatatttgcaatgaatggg |
4574511 |
T |
|
| Q |
211 |
agattggaa |
219 |
Q |
| |
|
||||||||| |
|
|
| T |
4574510 |
agattggaa |
4574502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 221
Target Start/End: Original strand, 4256349 - 4256552
Alignment:
| Q |
19 |
tttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgtggatggaactcaac |
118 |
Q |
| |
|
|||| |||||||| | ||||| || |||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
4256349 |
tttcggatagaggactaatcgagagttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttgactcattgaggatggaactcaac |
4256448 |
T |
|
| Q |
119 |
cgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatca-accaataaactgtagatatatctgcaatatatgggagattgg |
217 |
Q |
| |
|
| |||||||||| ||| ||||| ||||||||||||||||| |||| || |||||| ||||| ||||||||||| ||| || | |||||||||||| |
|
|
| T |
4256449 |
cattgaaagcatttgtgccggagttccaatgttgtgttggccattttttgctgatcagaccaacaaactgtagatttatttgtagcgaatgggagattgg |
4256548 |
T |
|
| Q |
218 |
aatt |
221 |
Q |
| |
|
|||| |
|
|
| T |
4256549 |
aatt |
4256552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 4299541 - 4299671
Alignment:
| Q |
1 |
ctgagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtca |
100 |
Q |
| |
|
||||||||||||| ||||||||| ||||||| | || |||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
4299541 |
ctgagtttgagaatgaaatttcaaatagaggcctaaccgcaagctagtgtccacaagaacaagtactgaaccacccttcaattggtggattcttgactca |
4299640 |
T |
|
| Q |
101 |
ttgtggatggaactcaaccgttgaaagcata |
131 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |
|
|
| T |
4299641 |
ctgtggatggaactcaaccattgaaagcata |
4299671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 220
Target Start/End: Complemental strand, 4598581 - 4598364
Alignment:
| Q |
3 |
gagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcatt |
102 |
Q |
| |
|
||||||| ||| ||||||||||||||||| | | ||||||||||||| ||||||||||||| | ||||| |||||||||||||||||||| | ||||| |
|
|
| T |
4598581 |
gagtttgtgaatgaaatttcagatagaggcttagttgcaagctggtgtctgcaagagcaagtattaaaccatccttcaattggtggattcttaactcatt |
4598482 |
T |
|
| Q |
103 |
gtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaa |
202 |
Q |
| |
|
| ||||||||||||||| |||||| ||| ||| |||||||||||||||||||| || |||| | ||||| | | ||||| |||||||| ||||| |
|
|
| T |
4598481 |
gcggatggaactcaaccactgaaagtatatgtgccggagtgccaatgttgtgttgtccctttttcgcggatcagcaagccaactgcagatatatttgcaa |
4598382 |
T |
|
| Q |
203 |
tatatgggagattggaat |
220 |
Q |
| |
|
| ||||||||||||||| |
|
|
| T |
4598381 |
tgaatgggagattggaat |
4598364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 6 - 218
Target Start/End: Complemental strand, 4516728 - 4516516
Alignment:
| Q |
6 |
tttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgtg |
105 |
Q |
| |
|
|||| ||| |||| ||| |||||||| ||| ||||||||||||||||||||| |||| ||||||| |||||| |||| |||||||||| |||||||| |
|
|
| T |
4516728 |
tttgtgaatgaaacttcggatagaggcgtaatagcaagctggtgtccgcaagagaaagtgttgaaccatccttcagttggaggattcttgactcattgtg |
4516629 |
T |
|
| Q |
106 |
gatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaatat |
205 |
Q |
| |
|
|||||||||| || | |||||||| ||| ||||| |||||||||||||||||||||| || ||| || |||| ||| || |||||||| |||||| |
|
|
| T |
4516628 |
gatggaactccacaatggaaagcatctgtgccggagtaccaatgttgtgttggcctttttttgctgagcagccaacaaattgcagatatatttgcaatga |
4516529 |
T |
|
| Q |
206 |
atgggagattgga |
218 |
Q |
| |
|
||||||||||||| |
|
|
| T |
4516528 |
atgggagattgga |
4516516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 11 - 160
Target Start/End: Complemental strand, 4481095 - 4480946
Alignment:
| Q |
11 |
gaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgtggatgg |
110 |
Q |
| |
|
||||||||||||| ||||||| | ||| ||||| |||||||| |||||| |||| |||||||||||||||| || |||||||||| |||||| |||||| |
|
|
| T |
4481095 |
gaaagaaatttcaaatagaggcctaatagcaagttggtgtccacaagagaaagttttgaaccacccttcaatcggcggattcttgactcattgcggatgg |
4480996 |
T |
|
| Q |
111 |
aactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcc |
160 |
Q |
| |
|
||||||||| |||||| || ||||||||||||||||||||||||||| |
|
|
| T |
4480995 |
aactcaaccactgaaagtgtatgtgctggagtgccaatgttgtgttggcc |
4480946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 179
Target Start/End: Complemental strand, 3172151 - 3171975
Alignment:
| Q |
3 |
gagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcatt |
102 |
Q |
| |
|
||||||| ||| ||||||||||||||||| | ||| ||||| ||||||||||||||| |||| ||||||| ||||||||||| |||||||||| ||| | |
|
|
| T |
3172151 |
gagtttgtgaatgaaatttcagatagaggcctaatagcaagttggtgtccgcaagagaaagtgttgaaccatccttcaattggcggattcttgactcact |
3172052 |
T |
|
| Q |
103 |
gtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaacca |
179 |
Q |
| |
|
| ||||||||||||||| ||||| || ||||||| |||||||||||||| |||| |||| || |||||||||| |
|
|
| T |
3172051 |
gcggatggaactcaaccacggaaagtgtatgtgctggaatgccaatgttgtgtaggccattttttgctgatcaacca |
3171975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 4493346 - 4493150
Alignment:
| Q |
22 |
cagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgtggatggaactcaaccgt |
121 |
Q |
| |
|
|||||||||| | ||| || || |||||||| |||||| || | |||||||||| ||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4493346 |
cagatagaggcctaattgctagttggtgtccacaagagaaactgctgaaccaccattcgattggtggattcttgactcattgtggatggaactcaactac |
4493247 |
T |
|
| Q |
122 |
tgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaatatatgggagattgga |
218 |
Q |
| |
|
||| |||| ||| |||||||||||||||||||||||||| | | ||||||| |||| ||||||||||| || |||||| || |||||||||| |
|
|
| T |
4493246 |
caaaaacatatgtgccggagtgccaatgttgtgttggcctttctttagtgatcagccaacaaactgtagattgatttgcaatgaattggagattgga |
4493150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 15 - 217
Target Start/End: Complemental strand, 4617420 - 4617218
Alignment:
| Q |
15 |
gaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgtggatggaact |
114 |
Q |
| |
|
|||||| |||||||||| | ||| ||||| |||||||| ||||| |||| |||||||||||||||| || |||||||||| |||||| |||||||| | |
|
|
| T |
4617420 |
gaaattgcagatagaggcctaatagcaagttggtgtccacaagacaaagtgttgaaccacccttcaatcggaggattcttgactcattgcggatggaatt |
4617321 |
T |
|
| Q |
115 |
caaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaatatatgggagat |
214 |
Q |
| |
|
||||| |||||| ||| |||||||||||||||||||||||||| |||| || || || |||| | ||||||||| ||| || ||| ||||||||| |
|
|
| T |
4617320 |
caaccactgaaagtatatgcgctggagtgccaatgttgtgttggccattttttgccgaccagccaacagactgtagatttatttgtaatgaatgggagat |
4617221 |
T |
|
| Q |
215 |
tgg |
217 |
Q |
| |
|
||| |
|
|
| T |
4617220 |
tgg |
4617218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 165
Target Start/End: Complemental strand, 4568466 - 4568304
Alignment:
| Q |
3 |
gagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcatt |
102 |
Q |
| |
|
||||||| ||| | || ||| |||||||| | ||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||||||| ||||| |
|
|
| T |
4568466 |
gagtttgtgaatggaacttcggatagaggccaaatagcaagctggtgtccgcaagagcaagtgttgaaccacccttcagttggacgattcttgactcatt |
4568367 |
T |
|
| Q |
103 |
gtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggccttttt |
165 |
Q |
| |
|
||||||||||||| || | |||||||| ||| |||| |||||||| ||||||||||||| |
|
|
| T |
4568366 |
gtggatggaactccacattggaaagcatttgtgccagagtaccaatgttatgttggccttttt |
4568304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 217
Target Start/End: Complemental strand, 4458001 - 4457790
Alignment:
| Q |
6 |
tttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgtg |
105 |
Q |
| |
|
|||| ||| |||| ||| |||||||| ||| ||||| |||||||| ||||| |||| |||||||||||||||| || |||||||||| |||||||| |
|
|
| T |
4458001 |
tttgtgaatgaaacttctgatagaggcttaatagcaagttggtgtccacaagataaagtgttgaaccacccttcaatcggaggattcttgactcattgtg |
4457902 |
T |
|
| Q |
106 |
gatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaatat |
205 |
Q |
| |
|
|||| ||||||||| |||||||||| ||||||||||||||| || ||||||| || | ||||||| | |||| || ||||||| ||| |||||| |
|
|
| T |
4457901 |
gatgaaactcaaccactgaaagcatatgcgctggagtgccaatgctgcgttggccattctttggtgataagccaacaagttgtagatttatttgcaatga |
4457802 |
T |
|
| Q |
206 |
atgggagattgg |
217 |
Q |
| |
|
||| |||||||| |
|
|
| T |
4457801 |
atgagagattgg |
4457790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 165
Target Start/End: Original strand, 4504155 - 4504281
Alignment:
| Q |
39 |
gcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgctg |
138 |
Q |
| |
|
||||| |||||||| ||||| |||| |||||||||||||||| || |||||||||| |||||||||||||||||||||| |||||| | ||||| |
|
|
| T |
4504155 |
gcaagttggtgtccacaagataaagtgttgaaccacccttcaatcggaggattcttgactcattgtggatggaactcaaccactgaaagtgtttgtgctg |
4504254 |
T |
|
| Q |
139 |
gagtgccaatgttgtgttggccttttt |
165 |
Q |
| |
|
|||||||||||||||||||||| |||| |
|
|
| T |
4504255 |
gagtgccaatgttgtgttggccatttt |
4504281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 130
Target Start/End: Original strand, 4391844 - 4391976
Alignment:
| Q |
2 |
tgagtttgagaaagaaatttcagatagaggtcgaa----tcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgag |
97 |
Q |
| |
|
||||| |||||| ||||||||||||||||||| | ||||||| ||||||||| ||||||||||| |||||||||||| |||| |||||||||| | |
|
|
| T |
4391844 |
tgagtatgagaatgaaatttcagatagaggtctatctagtcgcaagatggtgtccgaaagagcaagtattgaaccacccttgaatttgtggattcttaac |
4391943 |
T |
|
| Q |
98 |
tcattgtggatggaactcaaccgttgaaagcat |
130 |
Q |
| |
|
||||||||||| |||||| || |||||||||| |
|
|
| T |
4391944 |
gcattgtggatgaaactcacccattgaaagcat |
4391976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 4406 - 4618
Alignment:
| Q |
1 |
ctgagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtca |
100 |
Q |
| |
|
||||||||||||| ||||||||||||||||| | ||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
4406 |
ctgagtttgagaatgaaatttcagatagaggcctaattgcgagctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactca |
4505 |
T |
|
| Q |
101 |
ttgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgc |
200 |
Q |
| |
|
||| ||||||||||||||| ||||||||||| || ||||||||||||||||||||||| |||| | ||||| |||| ||||| | | ||||||| | |
|
|
| T |
4506 |
ttgcggatggaactcaaccattgaaagcatatgtgtaggagtgccaatgttgtgttggccatttttcgccgatcagccaacaaactatcggtatatctcc |
4605 |
T |
|
| Q |
201 |
aatatatgggaga |
213 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4606 |
catatatgggaga |
4618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 6 - 218
Target Start/End: Original strand, 3444 - 3656
Alignment:
| Q |
6 |
tttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgtg |
105 |
Q |
| |
|
|||||||| ||||||||||||||||| | |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
3444 |
tttgagaatgaaatttcagatagaggcctaatcacaagctggtgtccacaagagcaagtactgatccacccttcaattggtggattcttgactcattgtg |
3543 |
T |
|
| Q |
106 |
gatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaatat |
205 |
Q |
| |
|
||||||| |||||| |||||||||| |||||||| |||||| | |||||||| || | ||||||||| |||| ||||||||||| ||| ||||| |
|
|
| T |
3544 |
gatggaattcaaccactgaaagcatatgcgctggagtaccaatgctttgttggccattctttggtgatcagccaacaaactgtagatttatttgcaacga |
3643 |
T |
|
| Q |
206 |
atgggagattgga |
218 |
Q |
| |
|
||||||||||||| |
|
|
| T |
3644 |
atgggagattgga |
3656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 12 - 218
Target Start/End: Complemental strand, 24103400 - 24103194
Alignment:
| Q |
12 |
aaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgtggatgga |
111 |
Q |
| |
|
|||||| ||||||||||||| | ||| ||||| |||||||| ||||| |||| | ||||||||||| |||||||||||||||| |||||| ||||||| |
|
|
| T |
24103400 |
aaagaagtttcagatagaggactaatagcaagttggtgtccacaagataaagtgttaaaccacccttcgattggtggattcttgactcattgcggatgga |
24103301 |
T |
|
| Q |
112 |
actcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaatatatggga |
211 |
Q |
| |
|
|||||||| |||||||||| ||||||||||||||||||||||||||| || | |||||||||||||| ||||||||||| ||| ||| || |||||| |
|
|
| T |
24103300 |
actcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattctttggtgatcaaccaacaaactgtagatttatttgctatgaatggga |
24103201 |
T |
|
| Q |
212 |
gattgga |
218 |
Q |
| |
|
||||||| |
|
|
| T |
24103200 |
gattgga |
24103194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 27999819 - 28000035
Alignment:
| Q |
1 |
ctgagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtca |
100 |
Q |
| |
|
|||||||| ||||||||||||||||||||| | ||| ||| |||||||| |||||| |||| |||||||||||||||| | || ||||||| ||| |
|
|
| T |
27999819 |
ctgagtttaggaaagaaatttcagatagaggcctaatatcaaattggtgtccacaagagaaagttttgaaccacccttcaatcagcgggttcttgactca |
27999918 |
T |
|
| Q |
101 |
ttgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgc |
200 |
Q |
| |
|
|| ||||||||||||||| ||||||||| |||||||||||||||||||||||| | |||| || |||||| |||| ||||||||||| ||| || |
|
|
| T |
27999919 |
ctgcggatggaactcaaccaccgaaagcatatgcgctggagtgccaatgttgtgttggtcattttttgctgatcagccaacaaactgtagatttatttgt |
28000018 |
T |
|
| Q |
201 |
aatatatgggagattgg |
217 |
Q |
| |
|
||| |||| ||||||| |
|
|
| T |
28000019 |
aatgaatggaagattgg |
28000035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 1281526 - 1281310
Alignment:
| Q |
1 |
ctgagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtca |
100 |
Q |
| |
|
|||| |||| ||| ||||||||||||||||| | ||| ||||| |||||||| |||||| |||| |||||||||||||||| ||||||||||||| ||| |
|
|
| T |
1281526 |
ctgactttgcgaatgaaatttcagatagaggcctaatagcaagttggtgtccacaagagaaagtgttgaaccacccttcaatcggtggattcttgactca |
1281427 |
T |
|
| Q |
101 |
ttgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgc |
200 |
Q |
| |
|
||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||| || |||||| |||| | ||||||||| ||| || |
|
|
| T |
1281426 |
ttgcggatggaactcaaccactgaaagcatatgtgctggagtgccaatgttgtgttggccattttttgctgatcagccaacagactgtagatttatttgt |
1281327 |
T |
|
| Q |
201 |
aatatatgggagattgg |
217 |
Q |
| |
|
||| |||| ||||||| |
|
|
| T |
1281326 |
aatgaatggaagattgg |
1281310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 16685987 - 16686203
Alignment:
| Q |
1 |
ctgagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtca |
100 |
Q |
| |
|
|||||||| |||| ||||| ||||||||| | | |||||| |||||||| ||||||||||||||| | ||||| |||||||| ||||||||||| | ||| |
|
|
| T |
16685987 |
ctgagtttaagaatgaaatctcagatagaagcctaatcgcgagctggtgcccgcaagagcaagtattaaaccatccttcaatcggtggattcttaactca |
16686086 |
T |
|
| Q |
101 |
ttgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgc |
200 |
Q |
| |
|
||||||||||||||||||| |||||| ||| ||||||||| ||||||||||||||||| |||| || |||||| ||| ||| || |||||||| ||| |
|
|
| T |
16686087 |
ttgtggatggaactcaaccactgaaagtatatatgctggagttccaatgttgtgttggccattttttgctgatcagccagcaaaatgcagatatatttgc |
16686186 |
T |
|
| Q |
201 |
aatatatgggagattgg |
217 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
16686187 |
aatgaatgggagattgg |
16686203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 20863567 - 20863779
Alignment:
| Q |
5 |
gtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgt |
104 |
Q |
| |
|
||||| ||| ||||||||||||||||| | |||||| || |||||||| |||||| | || ||||||| ||||||||||||||||| | | ||||||| |
|
|
| T |
20863567 |
gtttgtgaatgaaatttcagatagaggcctaatcgcgagttggtgtccacaagagaaggtgttgaaccatccttcaattggtggatttctaactcattgt |
20863666 |
T |
|
| Q |
105 |
ggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgcaata |
204 |
Q |
| |
|
||||||||||||||| |||| |||||| ||||||||||||||||||||| ||||| |||| || |||||| || | |||||| ||||| || ||||| | |
|
|
| T |
20863667 |
ggatggaactcaaccattgagagcatatgtgctggagtgccaatgttgtgctggccattttttgctgatcagccgacaaactgcagatacatttgcaaca |
20863766 |
T |
|
| Q |
205 |
tatgggagattgg |
217 |
Q |
| |
|
|||||||||||| |
|
|
| T |
20863767 |
aatgggagattgg |
20863779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 1674638 - 1674422
Alignment:
| Q |
1 |
ctgagtttgagaaagaaatttcagatagaggtcgaatcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtca |
100 |
Q |
| |
|
|||||||| ||||||||||||||||||||| | ||| ||| |||||||| |||||| |||| |||||||||||||||| || |||||||||| || |
|
|
| T |
1674638 |
ctgagtttatgaaagaaatttcagatagaggcctaatatcaaattggtgtccacaagagaaagtgttgaaccacccttcaatcggcggattcttgacaca |
1674539 |
T |
|
| Q |
101 |
ttgtggatggaactcaaccgttgaaagcatacttgctggagtgccaatgttgtgttggcctttttatggtgatcaaccaataaactgtagatatatctgc |
200 |
Q |
| |
|
|| ||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||| || |||||| |||| ||||||||||| ||| || |
|
|
| T |
1674538 |
ctgcggatggaactcaaccactgaaagcatatgcgctggagtgccaatgttgtgttggccattttttgctgatcagccaacaaactgtagatttatttgt |
1674439 |
T |
|
| Q |
201 |
aatatatgggagattgg |
217 |
Q |
| |
|
||| |||| ||||||| |
|
|
| T |
1674438 |
aatgaatggaagattgg |
1674422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 1965197 - 1965247
Alignment:
| Q |
77 |
ttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaag |
127 |
Q |
| |
|
||||||||| || ||||||||||| ||||| |||||||||||| ||||||| |
|
|
| T |
1965197 |
ttcaattggagggttcttgagtcactgtggttggaactcaacccttgaaag |
1965247 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 124
Target Start/End: Original strand, 1969140 - 1969186
Alignment:
| Q |
78 |
tcaattggtggattcttgagtcattgtggatggaactcaaccgttga |
124 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||| |||||| |||| |
|
|
| T |
1969140 |
tcaattggtggattcttgactcattgtggctggaattcaacccttga |
1969186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 37 - 165
Target Start/End: Original strand, 3441 - 3568
Alignment:
| Q |
37 |
tcgcaagctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgagtcattgtggatggaactcaaccgttgaaagcatacttgc |
136 |
Q |
| |
|
||||||| ||||||||| |||||||||| |||||||||||| | ||||||||||||| | |||||||||||||||||||||| |||||||||| | | |
|
|
| T |
3441 |
tcgcaagatggtgtccgtaagagcaagtgttgaaccaccctt-agttggtggattcttaactcattgtggatggaactcaaccattgaaagcatttgttc |
3539 |
T |
|
| Q |
137 |
tggagtgccaatgttgtgttggccttttt |
165 |
Q |
| |
|
|||||| |||||| || ||||||| |||| |
|
|
| T |
3540 |
tggagttccaatgctgcgttggccatttt |
3568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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