View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19213_low_24 (Length: 206)
Name: NF19213_low_24
Description: NF19213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19213_low_24 |
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Alignment Details
Target: chr1 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 2292040 - 2291864
Alignment:
| Q |
11 |
tccaagaatataacccttcttccttccattgccaaactttccttacaaacaatctttcttgaatctcgtaatatgttttgttgactattacaaactcctc |
110 |
Q |
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| T |
2292040 |
tccaacaaaataacccttcttccttccattgccaaactttccttacaaacaatctttcttgaatctcgtaatatgttttgttgactattacaaactcctc |
2291941 |
T |
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| Q |
111 |
gtcaccttgactgattcataacagatggaagatcaactgatttcataacattcacatacccatcaactcattatttg |
187 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2291940 |
gtcaccttgactgattcataacagatggaagatcaactgatttcataacattcacatacccatcaactcattatttg |
2291864 |
T |
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