View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19214_low_13 (Length: 331)

Name: NF19214_low_13
Description: NF19214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19214_low_13
NF19214_low_13
[»] chr8 (24 HSPs)
chr8 (167-314)||(29039326-29039473)
chr8 (174-245)||(19369055-19369127)
chr8 (167-245)||(29037711-29037789)
chr8 (167-256)||(33192688-33192776)
chr8 (167-257)||(20286741-20286831)
chr8 (167-257)||(21073370-21073460)
chr8 (167-257)||(23818846-23818936)
chr8 (176-257)||(3739298-3739378)
chr8 (176-257)||(16243463-16243543)
chr8 (174-257)||(43920279-43920360)
chr8 (202-257)||(1170261-1170315)
chr8 (198-251)||(14976111-14976164)
chr8 (209-254)||(15919848-15919893)
chr8 (167-254)||(9280000-9280087)
chr8 (208-255)||(18637896-18637943)
chr8 (167-213)||(23085735-23085782)
chr8 (168-257)||(37401950-37402038)
chr8 (190-259)||(3370123-3370192)
chr8 (190-259)||(9187309-9187378)
chr8 (174-262)||(4856441-4856528)
chr8 (167-238)||(16326407-16326479)
chr8 (180-252)||(32161581-32161653)
chr8 (167-257)||(33099998-33100086)
chr8 (174-257)||(43921939-43922020)
[»] chr4 (34 HSPs)
chr4 (176-254)||(29656369-29656447)
chr4 (167-257)||(35603359-35603450)
chr4 (174-257)||(39227354-39227436)
chr4 (167-244)||(24425834-24425912)
chr4 (167-245)||(7059129-7059208)
chr4 (176-255)||(143688-143767)
chr4 (167-257)||(15742504-15742594)
chr4 (176-254)||(13781309-13781386)
chr4 (167-252)||(19442947-19443033)
chr4 (176-245)||(54856318-54856386)
chr4 (170-257)||(46251016-46251104)
chr4 (176-243)||(18712923-18712990)
chr4 (188-254)||(25065864-25065930)
chr4 (186-242)||(33144814-33144870)
chr4 (176-254)||(1361011-1361087)
chr4 (167-257)||(38374369-38374460)
chr4 (167-251)||(6196415-6196498)
chr4 (176-257)||(12214806-12214885)
chr4 (167-257)||(13204598-13204687)
chr4 (176-257)||(20702111-20702190)
chr4 (174-234)||(375971-376029)
chr4 (190-254)||(893646-893710)
chr4 (167-257)||(18417396-18417485)
chr4 (187-227)||(51400421-51400461)
chr4 (167-257)||(35518854-35518945)
chr4 (167-221)||(53451025-53451080)
chr4 (167-227)||(7396047-7396106)
chr4 (199-257)||(49319891-49319949)
chr4 (176-257)||(8897777-8897857)
chr4 (196-257)||(12114791-12114851)
chr4 (167-206)||(21954735-21954775)
chr4 (167-257)||(25987523-25987611)
chr4 (209-257)||(28494370-28494418)
chr4 (167-257)||(43317366-43317455)
[»] chr1 (41 HSPs)
chr1 (180-257)||(27904591-27904668)
chr1 (176-258)||(34011450-34011531)
chr1 (176-256)||(15874767-15874847)
chr1 (167-254)||(12779924-12780011)
chr1 (168-244)||(50944346-50944423)
chr1 (167-257)||(925236-925328)
chr1 (167-254)||(33934396-33934484)
chr1 (167-245)||(17580077-17580156)
chr1 (176-259)||(21343659-21343742)
chr1 (176-259)||(21348524-21348607)
chr1 (174-263)||(16424224-16424313)
chr1 (167-254)||(8573770-8573858)
chr1 (167-254)||(44922870-44922958)
chr1 (167-251)||(48419813-48419896)
chr1 (167-245)||(21335923-21336001)
chr1 (167-257)||(52043018-52043108)
chr1 (176-254)||(10172119-10172197)
chr1 (167-245)||(12266695-12266774)
chr1 (167-257)||(15476185-15476276)
chr1 (167-245)||(15597109-15597188)
chr1 (176-243)||(16388679-16388744)
chr1 (167-245)||(24231943-24232022)
chr1 (187-245)||(20027405-20027463)
chr1 (167-244)||(27307904-27307981)
chr1 (167-252)||(29689699-29689784)
chr1 (167-252)||(29717211-29717296)
chr1 (167-207)||(12264778-12264819)
chr1 (188-257)||(17875022-17875091)
chr1 (176-256)||(15874410-15874490)
chr1 (167-257)||(16823828-16823919)
chr1 (167-254)||(19955327-19955415)
chr1 (174-257)||(35547415-35547498)
chr1 (190-257)||(23773630-23773697)
chr1 (167-245)||(25825184-25825263)
chr1 (176-257)||(650584-650662)
chr1 (167-255)||(37706258-37706345)
chr1 (180-245)||(50944905-50944968)
chr1 (174-223)||(1570476-1570525)
chr1 (176-253)||(29689191-29689268)
chr1 (283-319)||(11409039-11409075)
chr1 (176-252)||(23329077-23329152)
[»] chr5 (35 HSPs)
chr5 (167-257)||(13998975-13999066)
chr5 (176-257)||(42515914-42515996)
chr5 (176-257)||(31331148-31331229)
chr5 (176-257)||(31379930-31380011)
chr5 (167-254)||(18524624-18524712)
chr5 (176-257)||(15988513-15988594)
chr5 (167-257)||(30841429-30841520)
chr5 (178-244)||(7938432-7938498)
chr5 (167-251)||(22702034-22702119)
chr5 (176-259)||(11992464-11992544)
chr5 (176-246)||(831938-832008)
chr5 (176-257)||(4326683-4326763)
chr5 (200-257)||(5025407-5025464)
chr5 (167-259)||(9523654-9523747)
chr5 (167-254)||(8839589-8839676)
chr5 (167-238)||(24250713-24250785)
chr5 (174-242)||(28002459-28002527)
chr5 (176-220)||(42506008-42506052)
chr5 (167-244)||(36226267-36226344)
chr5 (167-244)||(42919185-42919262)
chr5 (176-256)||(4326574-4326654)
chr5 (182-244)||(19929739-19929800)
chr5 (176-244)||(23270248-23270315)
chr5 (168-227)||(25524421-25524481)
chr5 (167-257)||(35271880-35271969)
chr5 (167-245)||(830888-830967)
chr5 (168-257)||(8943529-8943619)
chr5 (176-218)||(16539087-16539128)
chr5 (176-245)||(25782225-25782295)
chr5 (176-245)||(33628901-33628968)
chr5 (167-241)||(17013783-17013855)
chr5 (188-257)||(17916306-17916375)
chr5 (176-257)||(28868527-28868607)
chr5 (167-242)||(42521821-42521896)
chr5 (167-257)||(43369889-43369978)
[»] chr3 (34 HSPs)
chr3 (167-257)||(611417-611508)
chr3 (167-254)||(18956711-18956799)
chr3 (167-252)||(17438978-17439064)
chr3 (176-257)||(4578065-4578145)
chr3 (167-258)||(5907531-5907622)
chr3 (167-254)||(26130340-26130428)
chr3 (1-48)||(22922023-22922070)
chr3 (167-257)||(24487571-24487662)
chr3 (178-257)||(45885651-45885730)
chr3 (177-254)||(22129615-22129692)
chr3 (174-243)||(35938627-35938695)
chr3 (167-254)||(10823990-10824078)
chr3 (167-258)||(39822869-39822961)
chr3 (179-257)||(21079056-21079134)
chr3 (176-245)||(15522270-15522339)
chr3 (167-227)||(21789969-21790030)
chr3 (202-254)||(49429588-49429640)
chr3 (176-254)||(10436331-10436407)
chr3 (174-245)||(21092219-21092290)
chr3 (167-252)||(35379637-35379721)
chr3 (167-257)||(42392149-42392240)
chr3 (176-219)||(49429410-49429453)
chr3 (167-252)||(9861507-9861592)
chr3 (176-257)||(12565767-12565844)
chr3 (176-257)||(13260170-13260247)
chr3 (174-256)||(45702292-45702373)
chr3 (167-267)||(51834010-51834108)
chr3 (167-250)||(9861062-9861146)
chr3 (167-257)||(18722384-18722473)
chr3 (190-253)||(29626082-29626145)
chr3 (167-246)||(19592402-19592481)
chr3 (176-258)||(37431258-37431338)
chr3 (176-243)||(9860138-9860203)
chr3 (167-257)||(35378831-35378920)
[»] chr2 (34 HSPs)
chr2 (167-257)||(35156019-35156110)
chr2 (167-257)||(45406712-45406803)
chr2 (167-258)||(42185019-42185111)
chr2 (174-257)||(7603922-7604005)
chr2 (167-257)||(27597037-27597128)
chr2 (167-257)||(5879898-5879987)
chr2 (167-254)||(27360625-27360713)
chr2 (176-250)||(22882189-22882263)
chr2 (176-257)||(21885525-21885606)
chr2 (167-257)||(40499575-40499664)
chr2 (167-257)||(33676960-33677050)
chr2 (167-220)||(20972934-20972988)
chr2 (191-257)||(31593779-31593845)
chr2 (167-254)||(9192364-9192451)
chr2 (167-245)||(24004807-24004886)
chr2 (190-257)||(25915449-25915516)
chr2 (167-245)||(35126173-35126252)
chr2 (167-257)||(38702457-38702548)
chr2 (176-255)||(42651632-42651710)
chr2 (187-245)||(10552707-10552764)
chr2 (203-253)||(14690199-14690249)
chr2 (174-255)||(740973-741054)
chr2 (167-245)||(17372683-17372761)
chr2 (167-245)||(1110820-1110900)
chr2 (186-257)||(15508299-15508370)
chr2 (168-257)||(36214012-36214100)
chr2 (167-245)||(39271859-39271938)
chr2 (168-257)||(40324110-40324198)
chr2 (167-257)||(41384806-41384897)
chr2 (215-257)||(21920152-21920194)
chr2 (168-257)||(27912813-27912903)
chr2 (167-256)||(36205370-36205460)
chr2 (201-255)||(42651403-42651457)
chr2 (176-245)||(35958502-35958571)
[»] chr6 (17 HSPs)
chr6 (176-254)||(17352864-17352942)
chr6 (166-258)||(14964985-14965078)
chr6 (167-254)||(32333511-32333599)
chr6 (174-254)||(18625273-18625351)
chr6 (167-257)||(2595373-2595461)
chr6 (167-254)||(17259690-17259778)
chr6 (167-254)||(23124178-23124266)
chr6 (167-262)||(34352623-34352719)
chr6 (168-250)||(3103503-3103586)
chr6 (176-255)||(32530776-32530854)
chr6 (167-257)||(10459880-10459969)
chr6 (190-254)||(12170175-12170239)
chr6 (167-254)||(30233052-30233140)
chr6 (202-256)||(17829530-17829584)
chr6 (188-257)||(25056303-25056370)
chr6 (167-250)||(14910083-14910165)
chr6 (196-245)||(29744634-29744682)
[»] scaffold0123 (1 HSPs)
scaffold0123 (176-256)||(31094-31174)
[»] chr7 (39 HSPs)
chr7 (176-256)||(31283717-31283797)
chr7 (167-264)||(27241341-27241439)
chr7 (168-242)||(29366720-29366795)
chr7 (167-245)||(36610129-36610208)
chr7 (167-227)||(25489640-25489701)
chr7 (176-257)||(34728943-34729024)
chr7 (167-245)||(20536127-20536207)
chr7 (167-254)||(39618467-39618554)
chr7 (167-257)||(28959132-28959222)
chr7 (177-257)||(4676342-4676423)
chr7 (202-259)||(8801251-8801308)
chr7 (167-257)||(20034707-20034795)
chr7 (167-243)||(48629137-48629214)
chr7 (174-238)||(23050244-23050308)
chr7 (167-257)||(37732221-37732313)
chr7 (167-257)||(10040158-10040248)
chr7 (195-254)||(15994866-15994925)
chr7 (167-245)||(20149498-20149577)
chr7 (167-257)||(39786283-39786374)
chr7 (190-252)||(2475321-2475383)
chr7 (167-228)||(27241231-27241293)
chr7 (167-254)||(20045120-20045206)
chr7 (176-256)||(4550114-4550193)
chr7 (177-257)||(31176549-31176629)
chr7 (167-257)||(38175314-38175403)
chr7 (167-257)||(1766599-1766689)
chr7 (167-257)||(7809543-7809634)
chr7 (167-245)||(9334462-9334541)
chr7 (167-213)||(21993728-21993775)
chr7 (167-221)||(48525710-48525765)
chr7 (176-257)||(7956944-7957023)
chr7 (176-250)||(14243956-14244030)
chr7 (176-257)||(17255139-17255217)
chr7 (215-257)||(27509382-27509424)
chr7 (167-243)||(25834287-25834364)
chr7 (167-243)||(41747970-41748047)
chr7 (176-245)||(46671314-46671382)
chr7 (167-245)||(2275928-2276005)
chr7 (202-254)||(14553765-14553817)
[»] scaffold0014 (1 HSPs)
scaffold0014 (167-257)||(21335-21426)
[»] scaffold0196 (2 HSPs)
scaffold0196 (167-245)||(9413-9492)
scaffold0196 (196-245)||(8450-8499)
[»] scaffold0543 (1 HSPs)
scaffold0543 (167-257)||(5020-5109)
[»] scaffold0492 (1 HSPs)
scaffold0492 (167-257)||(6566-6655)
[»] scaffold0888 (1 HSPs)
scaffold0888 (167-250)||(1260-1342)
[»] scaffold1578 (1 HSPs)
scaffold1578 (167-227)||(1335-1396)
[»] scaffold0005 (1 HSPs)
scaffold0005 (176-257)||(254365-254445)


Alignment Details
Target: chr8 (Bit Score: 123; Significance: 4e-63; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 167 - 314
Target Start/End: Complemental strand, 29039473 - 29039326
Alignment:
Q  167 atttgtattaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatgatttttgt 266  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29039473 atttgtattaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagaactgaaagaggttattttctttatagatagtatagatgatttttgt 29039374  T
Q  267 tgtgtcattnnnnnnntaagaatttagattatacttttttgttatatt 314  Q
    |||||||||       ||||||||||||||||||||||||||||||||    
T  29039373 tgtgtcattaaaaaaataagaatttagattatacttttttgttatatt 29039326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 245
Target Start/End: Original strand, 19369055 - 19369127
Alignment:
Q  174 ttaaaattgagggcatttttggaaagagaa-aaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||||||| |||||||||||||||| ||||||| || |||||||||||| || |||||||||||||||    
T  19369055 ttaaaattgagggtatttttggaaagagaagaaagtcaacccaaaagagctgaatgaagttattttctttata 19369127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 29037711 - 29037789
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||| ||||||| ||||||||||| ||||||||||| ||||||||||||||||||||  | ||||||||||||||    
T  29037711 atttgtattgaaaattgcgggcatttttg-aaagagaaaaaatcagcctaaaagagctgaaaaggcttattttctttata 29037789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 33192688 - 33192776
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtataga 256  Q
    ||||||||| ||||||||||||||||||||||||   ||||||||||| ||||||| ||||||| ||| ||||||||||| ||| ||||||    
T  33192688 atttgtattcaaaattgagggcatttttggaaagg--aaaagtcagcccaaaagagttgaaagaagttgttttctttatatataatataga 33192776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 20286741 - 20286831
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||||| |  ||||||| ||||| ||||||||| || |||||||||||||||| || ||||||||||| |||||||||||    
T  20286741 atttgtattgaaaattgatgatatttttgaaaaga-aaaaagtcaacccaaaagagctgaaagagattgttttctttatatatagtatagat 20286831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 21073370 - 21073460
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||||| |  ||||||| ||||| ||||||||| || |||||||||||||||| || ||||||||||| |||||||||||    
T  21073370 atttgtattgaaaattgatgatatttttgaaaaga-aaaaagtcaacccaaaagagctgaaagagattgttttctttatatatagtatagat 21073460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 23818846 - 23818936
Alignment:
Q  167 atttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||||||| ||| ||||||||||  |||||||||| | ||||| ||||||| |||||| |||||||||| ||||| |||||||||||    
T  23818846 atttgtattaaaaattgcgggcattttttaaaagagaaaa-gccagcccaaaagagttgaaaggggttattttccttatatatagtatagat 23818936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 3739378 - 3739298
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||| |||||||||| ||||| |||| |||| |  ||||||||| ||||| ||||||||||||||| |||||||||||    
T  3739378 aaaattgatggcatttttgaaaagataaaa-gtcaactcaaaagagctaaaagatgttattttctttatatatagtatagat 3739298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 16243543 - 16243463
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||||| |||||| ||||||||||||| ||||| ||||||| |||||  ||||||||||||  || |||||||||||    
T  16243543 aaaattgagggtattttttgaaagagaaaaagacagcc-aaaagagttgaaaagggttattttcttcgtatatagtatagat 16243463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 43920360 - 43920279
Alignment:
Q  174 ttaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||||||||||||||||||||||  |||| |||    |||||||||||||||  || ||||||||||| |||||||||||    
T  43920360 ttaaaattgagggcatttttggaaaga--aaaattcaattcaaaagagctgaaagaatttgttttctttatatatagtatagat 43920279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 257
Target Start/End: Complemental strand, 1170315 - 1170261
Alignment:
Q  202 aaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||||||| |||||||||||||| | |||||||||||||| |||||||||||    
T  1170315 aaaaagtcagccgaaaagagctgaaag-gattattttctttatatatagtatagat 1170261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 14976111 - 14976164
Alignment:
Q  198 agagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagt 251  Q
    |||||||||||||||| ||||||||||||||| ||  ||||||||||| |||||    
T  14976111 agagaaaaagtcagcccaaaagagctgaaagaagtagttttctttatatatagt 14976164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 15919848 - 15919893
Alignment:
Q  209 cagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  15919848 cagcccaaaagagttgaaagaggttattttctttatatatagtata 15919893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 9280087 - 9280000
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||| |||||| |||| ||||||| |||| ||||||||||| ||||||| ||||| || |||  ||||||||||| ||||||||    
T  9280087 atttgtattgaaaattaagggtatttttgaaaag-gaaaaagtcagtctaaaagtgctgagaggggtagttttctttatatatagtata 9280000  T

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Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 18637943 - 18637896
Alignment:
Q  208 tcagcctaaaagagctgaaagaggttattttctttatagatagtatag 255  Q
    |||||||||||||||| ||||||||  ||||||||||| |||||||||    
T  18637943 tcagcctaaaagagcttaaagaggtagttttctttatatatagtatag 18637896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 23085782 - 23085735
Alignment:
Q  167 atttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcc 213  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||    
T  23085782 atttgtattaaaaattgaaggcatttttagaaagagaaaaagtcagcc 23085735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 257
Target Start/End: Original strand, 37401950 - 37402038
Alignment:
Q  168 tttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||||||| || |||| |||||||||||||  |||| || ||| ||||| |||||||||| |  ||||||||||| |||||||||||    
T  37401950 tttgtattaaaaattaagggtatttttggaaaga--aaaattctgcccaaaagtgctgaaagagatagttttctttatatatagtatagat 37402038  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 259
Target Start/End: Original strand, 3370123 - 3370192
Alignment:
Q  190 ttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatga 259  Q
    ||||| ||| ||||||||||| || |||| ||| |||| | ||||||||||| ||| |||||||||||||    
T  3370123 ttttgaaaaaagaaaaagtcaacccaaaaaagccgaaacatgttattttcttcatatatagtatagatga 3370192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 9187378 - 9187309
Alignment:
Q  190 ttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatga 259  Q
    |||||||| ||||||||||||||  ||| ||||  ||||||  ||||||||||||| |||||||| ||||    
T  9187378 ttttggaatgagaaaaagtcagcacaaatgagccaaaagagactattttctttatatatagtatatatga 9187309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 262
Target Start/End: Original strand, 4856441 - 4856528
Alignment:
Q  174 ttaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatgattt 262  Q
    ||||||||||||  ||||||  |||  |||||| ||||   |||||||||||||||| || ||||||||||| ||| ||||||||||||    
T  4856441 ttaaaattgaggatattttttaaaaatgaaaaattcagtgcaaaagagctgaaagag-ttgttttctttatatataatatagatgattt 4856528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 16326479 - 16326407
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttatttt 238  Q
    ||||||||| ||||||||||  |||||| |||| ||||||||||| || ||||||| ||||| || |||||||    
T  16326479 atttgtattgaaaattgaggatattttttgaaaaagaaaaagtcaacccaaaagagttgaaaaagtttatttt 16326407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 32161653 - 32161581
Alignment:
Q  180 ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagta 252  Q
    |||| ||||| ||| ||||||||||||||||| | |||| ||||||||    |||||||||||||| ||||||    
T  32161653 ttgaaggcatctttagaaagagaaaaagtcagtccaaaaaagctgaaatgatttattttctttatatatagta 32161581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 33099998 - 33100086
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||||| ||||||  ||| | ||||||||| || ||||||| |||||| |||  ||||||||||| |||||||||||    
T  33099998 atttgtattcaaaattgagggtattttt--aaaaataaaaagtcaacccaaaagagttgaaaggggtg-ttttctttatatatagtatagat 33100086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 43922020 - 43921939
Alignment:
Q  174 ttaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||||| ||||||||   ||| |||||||  || || ||||||| |||||| |||| ||||||||||| |||||||||||    
T  43922020 ttaaaattgacggcattttc--aaaaagaaaaatccaacccaaaagaggtgaaaggggttgttttctttatatatagtatagat 43921939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 176 - 254
Target Start/End: Complemental strand, 29656447 - 29656369
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  29656447 aaaattgagggcagttttggaaagagaaaaagtcagcccaaaagagctgaaagaggttattttctttatatatagtata 29656369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 35603359 - 35603450
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||||| |||||||| | |||||||||||||||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  35603359 atttgtattgaaaattgatggcattttggaaaagagaaaaagtcagcccaaaagagttggaagaggttattttctttatatatagtatagat 35603450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 39227354 - 39227436
Alignment:
Q  174 ttaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||  |||| ||||||||||| ||| |||||||    
T  39227354 ttaaaattgagggcatttttgaaaagagaaaaagtcagcttaaaagagctgaaa-tggttgttttctttatatataatatagat 39227436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 167 - 244
Target Start/End: Complemental strand, 24425912 - 24425834
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttat 244  Q
    ||||||||| |||||| |||||||||||||||||||||| ||||||| |||||| |||||||||| |||||||||||||    
T  24425912 atttgtattgaaaattaagggcatttttggaaagagaaagagtcagcttaaaagtgctgaaagagattattttctttat 24425834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 245
Target Start/End: Complemental strand, 7059208 - 7059129
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||| |||||||| | ||||||||||||||| ||||||||||  |||||||||||||||| ||||||||||||||    
T  7059208 atttgtattgaaaattgaagacatttttggaaagaggaaaagtcagctcaaaagagctgaaagagattattttctttata 7059129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 176 - 255
Target Start/End: Original strand, 143688 - 143767
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatag 255  Q
    ||||||||||| ||||||| ||||||||||||||| || |||||||||||||||| |||||||  ||||| ||| |||||    
T  143688 aaaattgagggtatttttgaaaagagaaaaagtcaacccaaaagagctgaaagagattatttttcttatatataatatag 143767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 15742594 - 15742504
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||||| |||||| |||||| ||||||||||||||||| || ||||||  ||||||||||||| | |||||||||||    
T  15742594 atttgtattgaaaattgagggtattttttgaaaga-aaaaagtcagcctaaaaaagttgaaaggagttattttctttaaatatagtatagat 15742504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 254
Target Start/End: Complemental strand, 13781386 - 13781309
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    |||||||| || ||||||| ||| ||||||||||| |||||||||| ||||||| ||||||||||||||| ||||||||    
T  13781386 aaaattgaaggtatttttgaaaacagaaaaagtcaacctaaaagagttgaaaga-gttattttctttatatatagtata 13781309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 19442947 - 19443033
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagta 252  Q
    ||||||||| |||||||| | ||||||||||||||||||||||||||| || |||| ||||||| | | ||||||||||| ||||||    
T  19442947 atttgtattgaaaattgatgacatttttggaaagagaaaaagtcagcccaagagagttgaaagatgatgttttctttatatatagta 19443033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 54856386 - 54856318
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    |||||||||||||||||||||||||| |||||||||||  |||||||| || | ||||||||||||||||    
T  54856386 aaaattgagggcatttttggaaagag-aaaagtcagcccgaaagagcttaagggggttattttctttata 54856318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 46251104 - 46251016
Alignment:
Q  170 tgtattaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagat-agtatagat 257  Q
    |||||| |||||||   ||||||||||||||||||||||||    |||||||||||||||| |||||||||||||| || |||||||||    
T  46251104 tgtattgaaattgataacatttttggaaagagaaaaagtcaattcaaaagagctgaaagagattattttctttatatataagtatagat 46251016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 18712923 - 18712990
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttcttta 243  Q
    |||||||||| |||||||||||| ||||||| |||||||||||  |||||||||| | ||||||||||    
T  18712923 aaaattgaggacatttttggaaaaagaaaaattcagcctaaaaatgctgaaagagatcattttcttta 18712990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 25065864 - 25065930
Alignment:
Q  188 atttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||| |||||||||||||||||| | |||||||||||||||  |||||||||||||| ||| ||||    
T  25065864 attttcggaaagagaaaaagtcagtccaaaagagctgaaagaaattattttctttatatataatata 25065930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 33144870 - 33144814
Alignment:
Q  186 gcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttcttt 242  Q
    |||||||||||||| |||||| |||||| ||||||||| ||| ||||||||||||||    
T  33144870 gcatttttggaaagtgaaaaaatcagcccaaaagagcttaaataggttattttcttt 33144814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 254
Target Start/End: Complemental strand, 1361087 - 1361011
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||| |||||||| ||||||  ||||||||| ||||||||||| |||   ||||||||||||||| ||||||||    
T  1361087 aaaattgagagcatttttagaaaga--aaaagtcagtctaaaagagctaaaatgagttattttctttatatatagtata 1361011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 38374460 - 38374369
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||| || |||||||| ||||||||||||||||||| ||||   |||||| |  || ||||||||||| |||||||||||    
T  38374460 atttgtattgaaaattaagagcatttttagaaagagaaaaagtcagcccaaaaatactgaaaaatattgttttctttatatatagtatagat 38374369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 6196498 - 6196415
Alignment:
Q  167 atttgtattaaaatt-gagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagt 251  Q
    ||||||||| ||||| ||||||||||||| ||||||||||||||| ||   ||||| |||||| |||| ||||||||||| |||||    
T  6196498 atttgtattgaaatttgagggcatttttgaaaagagaaaaagtcaacc--caagagttgaaaggggttgttttctttatatatagt 6196415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 12214806 - 12214885
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||||| |||||||||||||  |||| |||||| ||||| | |||||| |||  ||||||||||| |||||||||||    
T  12214806 aaaattgagggtatttttggaaaga--aaaattcagcccaaaagtgttgaaaggggtagttttctttatacatagtatagat 12214885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 13204598 - 13204687
Alignment:
Q  167 atttgtattaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||||||||||||||| ||||||| |||| |||||| | |||| ||||  | ||||||| ||  ||||||||||| |||||||||||    
T  13204598 atttgtattaaaattgagggtatttttgaaaag-gaaaaattgagcccaaaaatgatgaaagaagtagttttctttatatatagtatagat 13204687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 20702190 - 20702111
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||||||  ||||||||||||  ||||  || || |||||||||||||  |||||||||||||||| |||||||||||    
T  20702190 aaaattgagggtgtttttggaaaga--aaaatccaacccaaaagagctgaaaagggttattttctttatatatagtatagat 20702111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 376029 - 375971
Alignment:
Q  174 ttaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggtta 234  Q
    ||||||||||||||||||||| |||||  ||||||||||| |||| |||||||||| ||||    
T  376029 ttaaaattgagggcatttttgaaaaga--aaaagtcagcccaaaatagctgaaagatgtta 375971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 893710 - 893646
Alignment:
Q  190 ttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||||||||||||| |||  |||||||| ||||| | ||||||||||||||  |||||||    
T  893710 ttttggaaagagaaaaagttagctcaaaagagccgaaagggtttattttctttatatgtagtata 893646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 18417396 - 18417485
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||| || |||||||||||||||  |||||||| || |||  ||||||||| |||| ||||||||||| || ||||||||    
T  18417396 atttgtattgaaaattaagagcatttttggaaaga--aaaagtcatcccaaacaagctgaaaggggttgttttctttatatatcgtatagat 18417485  T

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Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 51400421 - 51400461
Alignment:
Q  187 catttttggaaagagaaaaagtcagcctaaaagagctgaaa 227  Q
    |||||||||||||||||||||||| || |||||||||||||    
T  51400421 catttttggaaagagaaaaagtcaacccaaaagagctgaaa 51400461  T

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Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 35518945 - 35518854
Alignment:
Q  167 atttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||||||| |||| || || |||| |||||||||||||||  | |||||||||||||    |||||||||||||| ||| |||||||    
T  35518945 atttgtattaaaaattgacggtatatttgaaaagagaaaaagtcaatccaaaagagctgaaatgaattattttctttatatataatatagat 35518854  T

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Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 53451080 - 53451025
Alignment:
Q  167 atttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcctaaaagag 221  Q
    ||||||||| ||| ||||||| | |||||| |||||||||||||||||||||||||    
T  53451080 atttgtattgaaagttgagggtaattttgggaagagaaaaagtcagcctaaaagag 53451025  T

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Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 7396106 - 7396047
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaa 227  Q
    ||||||||| ||||||||||||||||||||||  ||||||| |||||| ||||||| |||||    
T  7396106 atttgtattcaaaattgagggcatttttggaa--agaaaaattcagcccaaaagaggtgaaa 7396047  T

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Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 49319891 - 49319949
Alignment:
Q  199 gagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||||||||| ||||| ||  |||||| |||||||||||||| ||| |||||||    
T  49319891 gagaaaaagtcagcccaaaagggccaaaagagattattttctttatatataatatagat 49319949  T

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Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 8897777 - 8897857
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||| | |||||| ||||||| |||||||| || || |||| | ||||||||  |||||||||||||| |||||||||||    
T  8897777 aaaattaaaggcattcttggaaaaagaaaaagccaacccaaaaaa-ctgaaagatattattttctttatatatagtatagat 8897857  T

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Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 257
Target Start/End: Complemental strand, 12114851 - 12114791
Alignment:
Q  196 aaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||||||  ||||  |||||| |||||||||||||||| |||||| |||||||||||    
T  12114851 aaagagaaaaagatagcccgaaagagatgaaagaggttatttt-tttatatatagtatagat 12114791  T

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Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 21954735 - 21954775
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaa 206  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  21954735 atttgtattgaaaattgatggcatttttggaaagagaaaaa 21954775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 25987611 - 25987523
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||||||  |||||||| |||||  |||||||| || ||||| |||||||| |||  ||||||||||| |||||||||||    
T  25987611 atttgtattgaaaattgagaacatttttgaaaaga--aaaagtcaacccaaaagtgctgaaag-ggtagttttctttatatatagtatagat 25987523  T

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Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 28494418 - 28494370
Alignment:
Q  209 cagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||| ||||||| |||||| |||| ||||||||||| |||||||||||    
T  28494418 cagcccaaaagagttgaaaggggttgttttctttatatatagtatagat 28494370  T

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Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 43317455 - 43317366
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||||| ||||||| |||||  |||| ||| || ||||| |||||||  ||| ||||||||| || |||||||||||    
T  43317455 atttgtattgaaaattgagggtatttttgaaaaga--aaaattcaacccaaaagtgctgaaaagggtgattttctttctatatagtatagat 43317366  T

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Target: chr1 (Bit Score: 62; Significance: 9e-27; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 27904591 - 27904668
Alignment:
Q  180 ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||    
T  27904591 ttgagggcatttttggaaaaagaaaaagtcaacctaaaagagctaaaagaggttattttctttatacatagtatagat 27904668  T

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Target: chr1; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 34011450 - 34011531
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatg 258  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  34011450 aaaattgagggcatttttggaaggagaaaa-gtcagcctaaaagagttgaaagaagttattttctttatatatagtatagatg 34011531  T

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Target: chr1; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 15874847 - 15874767
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtataga 256  Q
    ||||||||||  |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||| ||||||    
T  15874847 aaaattgaggatatttttggaaagagaaaaaggcagcctaaaagaactgaaagaggttattttctttatatataatataga 15874767  T

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Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 12780011 - 12779924
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||| ||||||||||||||| ||| ||||||||||| ||||||||    
T  12780011 atttgtattgaaaattgagggcaattttggaaaga-aaaaagtcagcccaaaagagctgaaagaagttgttttctttatatatagtata 12779924  T

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Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 244
Target Start/End: Original strand, 50944346 - 50944423
Alignment:
Q  168 tttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttat 244  Q
    |||||||| |||||||||||||||||||||||||||||||||||| | ||||||| ||||||| ||| ||||||||||    
T  50944346 tttgtattgaaaattgagggcatttttggaaagagaaaaagtcagaccaaaagagatgaaagatgttgttttctttat 50944423  T

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Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 925236 - 925328
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagag-gttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||| | | |||| ||||||||||||||||||| |||||||||||||||| ||| ||||||||||| |||||||||||    
T  925236 atttgtattcaaaattgagagtacttttagaaagagaaaaagtcagcccaaaagagctgaaagagagttgttttctttatatatagtatagat 925328  T

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Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 254
Target Start/End: Original strand, 33934396 - 33934484
Alignment:
Q  167 atttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||||||| || ||||||| ||| |||| |||||||||||||| |||||||||||||   ||||||||||||||| ||||||||    
T  33934396 atttgtattaaaaattaagggcatctttagaaaaagaaaaagtcagcccaaaagagctgaaatgagttattttctttatatatagtata 33934484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 17580077 - 17580156
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||| |||||| || | ||||||| ||||||||||||||| |||||||||||| ||||| |||||||||||||||    
T  17580077 atttgtattgaaaattaagagtatttttgaaaagagaaaaagtcaacctaaaagagctaaaagatgttattttctttata 17580156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 21343742 - 21343659
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatga 259  Q
    ||||||||||| ||||||| |||| ||||| ||||||| ||||  ||| |||  ||||||||||||||||||||||||||||||    
T  21343742 aaaattgagggtatttttgaaaagggaaaaggtcagcccaaaaatgcttaaaagggttattttctttatagatagtatagatga 21343659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 176 - 259
Target Start/End: Complemental strand, 21348607 - 21348524
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatga 259  Q
    ||||||||||| ||||||| |||| ||||| ||||||| ||||  ||| |||  ||||||||||||||||||||||||||||||    
T  21348607 aaaattgagggtatttttgaaaagggaaaaggtcagcccaaaaatgcttaaaagggttattttctttatagatagtatagatga 21348524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 16424313 - 16424224
Alignment:
Q  174 ttaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatgatttt 263  Q
    ||||||||||||||||||||| ||| |||||||||||  ||||||||||||||||  | | ||||| ||||| ||| ||||||| |||||    
T  16424313 ttaaaattgagggcatttttgaaaaaagaaaaagtcattctaaaagagctgaaaggagctgttttcgttatacataatatagataatttt 16424224  T

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Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 8573858 - 8573770
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||| |||||||| | |||||||| |||| ||||||||||| | ||||||||||||| | ||||||||||||||| ||| ||||    
T  8573858 atttgtattgaaaattgatgacatttttgtaaagggaaaaagtcagtccaaaagagctgaaaaatgttattttctttatatataatata 8573770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 254
Target Start/End: Original strand, 44922870 - 44922958
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||| |||||||| || |||||||||||||||||| ||||  ||||||||  |||||||| || ||||||||||| ||||||||    
T  44922870 atttgtattgaaaattgaaggtatttttggaaagagaaaatgtcaatctaaaagaattgaaagagattgttttctttatacatagtata 44922958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 48419813 - 48419896
Alignment:
Q  167 atttgtattaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagt 251  Q
    |||||||| ||||||||||| ||||||| ||||| |||||||||||| ||||| ||||||| ||||  ||||||||||| |||||    
T  48419813 atttgtatgaaaattgagggtatttttgaaaaga-aaaaagtcagcccaaaagtgctgaaataggtagttttctttatatatagt 48419896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 245
Target Start/End: Complemental strand, 21336001 - 21335923
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||| ||||||||||| ||||||| ||| |||||||||||||||||||| |||||||| |||  |||||||||||    
T  21336001 atttgtattgaaaattgagggtatttttgaaaa-agaaaaagtcagcctaaaagtgctgaaaggggtatttttctttata 21335923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 52043108 - 52043018
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||| |||| |||||| ||||| |||||| |||||||||||| ||||||||||||  |||||||| || |||||||||||    
T  52043108 atttgtattgaaaattaagggtatttttagaaag-gaaaaattcagcctaaaagtgctgaaagaggtagttttctttgtatatagtatagat 52043018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 254
Target Start/End: Complemental strand, 10172197 - 10172119
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||||||||||||| ||||||||||| ||| |  |||||||||||||  | ||||||||||||||  |||||||    
T  10172197 aaaattgagggcatttttgaaaagagaaaaaatcaactcaaaagagctgaaatggattattttctttatatctagtata 10172119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 245
Target Start/End: Complemental strand, 12266774 - 12266695
Alignment:
Q  167 atttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||||||| ||||||| |  |||| |||||||||||||||||||||||||||  ||| | | |||||||||||||    
T  12266774 atttgtattaaaagttgagggtagatttgaaaagagaaaaagtcagcctaaaagagccaaaatatgatattttctttata 12266695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 15476276 - 15476185
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||||| |  ||||||  ||||||||||| |||||| |||||||||||||| | |||||||||||| |  ||||||||||    
T  15476276 atttgtattgaaaattgaagatattttttaaaagagaaaaaatcagccaaaaagagctgaaagggattattttctttacatgtagtatagat 15476185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 245
Target Start/End: Complemental strand, 15597188 - 15597109
Alignment:
Q  167 atttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||||||| || || ||||||| ||||| |||||||||||||| ||||||| | ||||| |||||||| ||||||    
T  15597188 atttgtattaaaaattaagagcattttcggaaaaagaaaaagtcagcccaaaagagtttaaagatgttattttatttata 15597109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 16388744 - 16388679
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttcttta 243  Q
    |||||||||| |||||||||||||||||||||||| |  |||||||| | ||||||||||||||||||    
T  16388744 aaaattgagg-catttttggaaagagaaaaagtcaactcaaaagagccg-aagaggttattttcttta 16388679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 245
Target Start/End: Complemental strand, 24232022 - 24231943
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||| ||||||||||| | |||||||| ||||||| ||||| | |||| || ||||||| |||||||||||||||    
T  24232022 atttgtattgaaaattgagggtaattttggaaggagaaaaggtcagtccaaaaaaggtgaaagatgttattttctttata 24231943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 20027463 - 20027405
Alignment:
Q  187 catttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||||||||||||||||||| | |||||||||||||   || ||||||||||||    
T  20027463 catttttggaaagagaaaaagtcagtccaaaagagctgaaatgagtaattttctttata 20027405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 244
Target Start/End: Original strand, 27307904 - 27307981
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttat 244  Q
    ||||||||| ||||||||||| |||||||||||| ||||||||||||| ||||| | |||||| |||  ||||||||||    
T  27307904 atttgtattgaaaattgagggtatttttggaaag-gaaaaagtcagcccaaaagtgttgaaaggggtagttttctttat 27307981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 29689784 - 29689699
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagta 252  Q
    ||||||||| ||||||||| ||||||||  ||| ||||||||||||| |||||||||| |||| | ||||||||||| || ||||||    
T  29689784 atttgtattgaaaattgagagcattttttaaaa-agaaaaagtcagcataaaagagctaaaagcgattattttctttgtatatagta 29689699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 29717296 - 29717211
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagta 252  Q
    ||||||||| ||||||||| ||||||||  ||| ||||||||||||| |||||||||| |||| | ||||||||||| || ||||||    
T  29717296 atttgtattgaaaattgagagcattttttaaaa-agaaaaagtcagcataaaagagctaaaagcgattattttctttgtatatagta 29717211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 12264819 - 12264778
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaag 207  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  12264819 atttgtattcaaaattgagggcatttttggaaagagaaaaag 12264778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 17875091 - 17875022
Alignment:
Q  188 atttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||||||  |||||||||| || |||| ||||||||||  ||| |||||||||| |||||||||||    
T  17875091 atttttggaaaatgaaaaagtcaacccaaaaaagctgaaagatattactttctttatatatagtatagat 17875022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 15874490 - 15874410
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtataga 256  Q
    ||||||||||  ||| |||||||||||||||  || |||| || |  ||||||||||||||||||||||| ||| ||||||    
T  15874490 aaaattgaggatattcttggaaagagaaaaaaccaacctacaaaaattgaaagaggttattttctttatatataatataga 15874410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 16823828 - 16823919
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagag-ctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||||| || ||||||| |||||||||| ||| ||| |||| |  ||||| |||||||||||||||||| |||||||||||    
T  16823828 atttgtattgaaaattgatggtatttttgaaaagagaaaatgtcggcccaaaaaaaactgaa-gaggttattttctttatatatagtatagat 16823919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 19955415 - 19955327
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||| |||||| |||||||||||| |||||||||||  ||||| |||| || |||||    |||||||||||||| ||||||||    
T  19955415 atttgtattgaaaatttagggcatttttgaaaagagaaaaaaccagcccaaaaaagttgaaaataattattttctttatatatagtata 19955327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 35547415 - 35547498
Alignment:
Q  174 ttaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagc-tgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||||| |||| ||||||||||||||||| |||||  ||||| || |||||  |||| ||||||||||| |||||||||||    
T  35547415 ttaaaattgacggcacttttggaaagagaaaaa-tcagcacaaaagtgcttgaaaatggttgttttctttatatatagtatagat 35547498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 257
Target Start/End: Original strand, 23773630 - 23773697
Alignment:
Q  190 ttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||||||||||||| ||||  ||||||   |||| | ||||||||||||||| |||||||||||    
T  23773630 ttttggaaagagaaaaagacagctcaaaagaatcgaaacatgttattttctttatatatagtatagat 23773697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 25825184 - 25825263
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||| |||||| |||| | |||| ||||||  ||||||||||| ||||||| | |||| ||||||||||||||||    
T  25825184 atttgtattgaaaattaagggtaatttttgaaagattaaaagtcagcccaaaagagtttaaaggggttattttctttata 25825263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 650584 - 650662
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||| ||||||||||||||||||  ||||| ||||| ||| | |||||||  |||| ||||||||||| |||||||||||    
T  650584 aaaattaagggcatttttggaaaga--aaaagccagcccaaagg-gctgaaatgggttgttttctttatatatagtatagat 650662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 255
Target Start/End: Original strand, 37706258 - 37706345
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatag 255  Q
    ||||||||| ||||||||||| ||||||| |||||  |||| ||| || ||||| | |||||| ||| |||||||||||| |||||||||    
T  37706258 atttgtattgaaaattgagggtatttttgaaaaga--aaaattcatcccaaaagtgttgaaaggggtaattttctttatatatagtatag 37706345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 245
Target Start/End: Original strand, 50944905 - 50944968
Alignment:
Q  180 ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    |||||||||||| ||||||||  |||||||| || ||||||||| ||||||||| |||||| ||||    
T  50944905 ttgagggcatttatggaaaga--aaaagtcaacccaaaagagctaaaagaggttgttttctctata 50944968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 1570476 - 1570525
Alignment:
Q  174 ttaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagct 223  Q
    ||||||||||||| || ||| ||||||||||||||||| | |||||||||    
T  1570476 ttaaaattgagggtatattttgaaagagaaaaagtcagtccaaaagagct 1570525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 253
Target Start/End: Complemental strand, 29689268 - 29689191
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtat 253  Q
    |||||||||  |||||||| |||||||||| |||| || ||||||| | |||   ||||||||||||||| |||||||    
T  29689268 aaaattgagaacatttttgaaaagagaaaaggtcaacccaaaagaggttaaatgagttattttctttatatatagtat 29689191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 283 - 319
Target Start/End: Original strand, 11409039 - 11409075
Alignment:
Q  283 taagaatttagattatacttttttgttatattcttcg 319  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  11409039 taagaatttagattatatttttttgttatattattcg 11409075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 23329152 - 23329077
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagta 252  Q
    ||||||||||| ||||||| ||||| ||||| |||||| |||| || |||||   ||||||||||||||| ||||||    
T  23329152 aaaattgagggtatttttgaaaagaaaaaaa-tcagcccaaaaaagttgaaatgagttattttctttatatatagta 23329077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 13999066 - 13998975
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||| | ||||||| |||||||||||||||||| |||| |||||||||||    
T  13999066 atttgtattgaaaattgagggcacttttggaaagagaaaaagtcagtccaaaagagttgaaagaggttattttctctatatatagtatagat 13998975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 42515996 - 42515914
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggtt-attttctttatagatagtatagat 257  Q
    |||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||  |||| |||||| |||||||||||    
T  42515996 aaaattgatggcatttttggaaagagaaaaagtcagtccaaaagagctgaaagaggttgtttttttttatatatagtatagat 42515914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 31331148 - 31331229
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||  ||||| | ||||||||||||||| |||||||||||    
T  31331148 aaaattaagggcatttttggtaagagaaaaagtcatcctaaaagaattgaaaaatgttattttctttatatatagtatagat 31331229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 31379930 - 31380011
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||| ||||| |  |||||||||||||| |||||||||||    
T  31379930 aaaattaagggcatttttggtaagagaaaaagtcatcctaaaagagttgaaaaatattattttctttatatatagtatagat 31380011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 18524712 - 18524624
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||| |||||||| |  ||||||| |||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||    
T  18524712 atttgtattgaaaattgatgatatttttgaaaagagaaaaagtcagcacaaaatagctgaaagaggttattttctttatatatagtata 18524624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 15988513 - 15988594
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||||| ||||||||||| |||||||  ||||| ||| |||||||||||| || ||||||||||| |||||||||||    
T  15988513 aaaattgagggtatttttggaaaaagaaaaaaccagcccaaacgagctgaaagagattgttttctttatatatagtatagat 15988594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 30841520 - 30841429
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||||||||||||||| ||||||||||||  ||||| |||| | || |||  |||||||||||||||| |||||||||||    
T  30841520 atttgtattgaaaattgagggcattttttgaaagagaaaaaaccagccgaaaataacttaaatgggttattttctttatatatagtatagat 30841429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 7938432 - 7938498
Alignment:
Q  178 aattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttat 244  Q
    ||||||||||||||||||||| |||||| ||||| | ||||||||||||||  ||||||||||||||    
T  7938432 aattgagggcatttttggaaaaagaaaaggtcagtccaaaagagctgaaaggagttattttctttat 7938498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 22702119 - 22702034
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagt 251  Q
    ||||||||| ||||||||||  |||||||||||||||||||   |  ||||||||||||||||||| ||||||||||||| |||||    
T  22702119 atttgtattgaaaattgaggctatttttggaaagagaaaaaactattctaaaagagctgaaagaggctattttctttatatatagt 22702034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 11992464 - 11992544
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatga 259  Q
    ||||||||| ||||||||||||| |||||||||||| | || |||||| |||| |||||||||||||||  |||||||||||||    
T  11992464 aaaattgagagcatttttggaaa-agaaaaagtcagtccaacagagcttaaaggggttattttctttat--atagtatagatga 11992544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 832008 - 831938
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatag 246  Q
    ||||||||||||||||||| ||||||||||| ||| || ||||| ||||||||   |||||||||||||||    
T  832008 aaaattgagggcatttttgaaaagagaaaaaatcaacccaaaagtgctgaaaggaattattttctttatag 831938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 4326683 - 4326763
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||||||||||||||||| || ||||| |||||| |||||||||||||  |  | ||||||||||| |||||||||||    
T  4326683 aaaattgagggcatttttggaatga-aaaaattcagcccaaaagagctgaaattgaatgttttctttatatatagtatagat 4326763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 5025464 - 5025407
Alignment:
Q  200 agaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||||||| ||||||||||||||||| ||| ||||||||||| | |||||||||    
T  5025464 agaaaaagtcagtctaaaagagctgaaagatgttgttttctttatatacagtatagat 5025407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 259
Target Start/End: Complemental strand, 9523747 - 9523654
Alignment:
Q  167 atttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatga 259  Q
    ||||||||||||| ||||||| ||||||| |||| | ||||   |||  ||||||||||||||| ||||||||||||||| ||| |||||||||    
T  9523747 atttgtattaaaaattgagggtatttttgaaaaggggaaaatgtagcacaaaagagctgaaagatgttattttctttatatataatatagatga 9523654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 8839676 - 8839589
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||| ||||||||| ||||||||||||||| |||||  || || ||||||||||||||||||| |||| |||||| ||| ||||    
T  8839676 atttgtattgaaaattgagagcatttttggaaagaaaaaaac-caacccaaaagagctgaaagaggttgttttatttatatataatata 8839589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 238
Target Start/End: Complemental strand, 24250785 - 24250713
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttatttt 238  Q
    ||||||||| |||||||| ||||||||| |||||||||||||  || | |||||| |||||||||||||||||    
T  24250785 atttgtattcaaaattgaaggcatttttagaaagagaaaaaggtagtccaaaagaactgaaagaggttatttt 24250713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 28002527 - 28002459
Alignment:
Q  174 ttaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttcttt 242  Q
    |||||| ||| ||||||||| |||||||||||| ||| || ||||||||| ||||| ||||||||||||    
T  28002527 ttaaaactgatggcattttttgaaagagaaaaaatcaacccaaaagagcttaaagaagttattttcttt 28002459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 42506052 - 42506008
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaaga 220  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||    
T  42506052 aaaattgatggcatttttggaaagagaaaaagtcagcccaaaaga 42506008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 244
Target Start/End: Complemental strand, 36226344 - 36226267
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttat 244  Q
    ||||||||| ||||||||||  ||||||||||||||||||| |||||| |||| |||| ||| | ||||||||||||||    
T  36226344 atttgtattgaaaattgaggatatttttggaaagagaaaaa-tcagcccaaaaaagctaaaaaatgttattttctttat 36226267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 244
Target Start/End: Original strand, 42919185 - 42919262
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttat 244  Q
    ||||||||| |||||||||| ||||||||| ||||||||| ||||| | ||||||||| ||||  ||||||||||||||    
T  42919185 atttgtattgaaaattgagg-catttttgggaagagaaaaggtcagaccaaaagagcttaaaggagttattttctttat 42919262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 256
Target Start/End: Original strand, 4326574 - 4326654
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtataga 256  Q
    ||||||||||||||||||||||  | |||||   |||| ||||||| |||||| || | ||||||||||| ||||||||||    
T  4326574 aaaattgagggcatttttggaagaaaaaaaatagagcccaaaagagatgaaagggggtgttttctttatatatagtataga 4326654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 19929800 - 19929739
Alignment:
Q  182 gagggcatttttggaaagagaaaaagtcagcctaaaagagctg-aaagaggttattttctttat 244  Q
    ||||||||| |||||||||  ||||||||||| |||||||||| |||| |||||||||||||||    
T  19929800 gagggcattcttggaaaga--aaaagtcagcccaaaagagctgaaaaggggttattttctttat 19929739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 244
Target Start/End: Complemental strand, 23270315 - 23270248
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttat 244  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||  |||||||| |||  ||||||||||    
T  23270315 aaaattgagggtatttttggaaag-gaaaaagtcagcccaaaattgctgaaaggggtagttttctttat 23270248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 25524481 - 25524421
Alignment:
Q  168 tttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaa 227  Q
    |||||||| ||||||||||| ||||||| |||| |||||||||| || |||||||||||||    
T  25524481 tttgtattgaaaattgagggtatttttgaaaagtgaaaaagtcaacccaaaagagctgaaa 25524421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 35271969 - 35271880
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||| | || |||||||||||||  |||| |||||| ||||| ||||||| ||||  ||||||||||| |||||||||||    
T  35271969 atttgtattgaaaattaatggtatttttggaaaga--aaaattcagcccaaaagtgctgaaaaaggtagttttctttatatatagtatagat 35271880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 245
Target Start/End: Complemental strand, 830967 - 830888
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||| |||||| | || ||||| |||||| ||||||||||| | |||||||||||||   |||||||||||||||    
T  830967 atttgtattgaaaattaatggtattttgggaaagtgaaaaagtcagtccaaaagagctgaaatgagttattttctttata 830888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 257
Target Start/End: Original strand, 8943529 - 8943619
Alignment:
Q  168 tttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||| |||||||| | |||||||  ||||||||||| ||||| |||||||| ||||| | ||| |||| |||||| ||| |||||||    
T  8943529 tttgtattcaaaattgatgacatttttaaaaagagaaaaaatcagcttaaaagagatgaaaaaagttgttttatttatatataatatagat 8943619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 16539128 - 16539087
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaa 218  Q
    ||||||||||| |||||||||||| ||||||||||||||||||    
T  16539128 aaaattgagggtatttttggaaag-gaaaaagtcagcctaaaa 16539087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 25782225 - 25782295
Alignment:
Q  176 aaaattgagggcatttt-tggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||||| ||||| ||||||||||||||  ||||| ||||||  ||||||||||  |||||||||||    
T  25782225 aaaattgagggtattttttggaaagagaaaaatccagcccaaaagacatgaaagaggtggttttctttata 25782295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 33628968 - 33628901
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||||| |||||||||||||  |||  |||||| |||||  ||||||||||| ||||||||||||    
T  33628968 aaaattgagggtatttttggaaaga--aaatttcagcccaaaagttctgaaagaggtaattttctttata 33628901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 17013855 - 17013783
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctt 241  Q
    ||||||||| ||||||||||||||||||||||||   |||||||| |  ||||||| |||||  ||||||||||||    
T  17013855 atttgtattgaaaattgagggcatttttggaaag---aaaagtcaactcaaaagagttgaaatgggttattttctt 17013783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 17916306 - 17916375
Alignment:
Q  188 atttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||| ||||||| |||||||||||  |||| ||||||||   ||||||||||||||| ||| |||||||    
T  17916306 attttcggaaagaaaaaaagtcagcacaaaaaagctgaaaatagttattttctttatatataatatagat 17916375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 28868527 - 28868607
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||| | |||||||  |||||||||||||||  | ||||||| |||||||| || |||| |||||| |||||||||||    
T  28868527 aaaattgatgacatttttaaaaagagaaaaagtcaatccaaaagagttgaaagagatt-ttttttttatatatagtatagat 28868607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 242
Target Start/End: Complemental strand, 42521896 - 42521821
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttcttt 242  Q
    ||||||||| ||||||||||  ||||||  ||| |||||||| || || |||||||| |||||||||||||||||||    
T  42521896 atttgtattcaaaattgaggatattttttaaaa-agaaaaaggcaacccaaaagagccgaaagaggttattttcttt 42521821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 43369978 - 43369889
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||||| |||||| ||||||  |||| ||| || ||||| | ||||||| ||  ||||||||||| |||||||||||    
T  43369978 atttgtattgaaaattgagggtatttttagaaaga--aaaattcatcccaaaagtgttgaaagaagtagttttctttatatatagtatagat 43369889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 611508 - 611417
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||||||||||||| |||||||||||||| ||| ||||||||||||||| ||| ||||||||||| |||||||||||    
T  611508 atttgtattgaaaattgagggcatttttgaaaagagaaaaagtcggcccaaaagagctgaaagatgttgttttctttatatatagtatagat 611417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 18956799 - 18956711
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||| |||||||| |||||||||||||| |||||| |||| || ||||||||||||||||||||||||||||||| ||||||||    
T  18956799 atttgtattgaaaattgatggcatttttggaaatagaaaaggtcaacccaaaagagctgaaagaggttattttctttatatatagtata 18956711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 17438978 - 17439064
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagta 252  Q
    ||||||||| ||||||||||| | ||||||||||||  |||| ||||| ||||||||| ||||||||||||||||||||| ||||||    
T  17438978 atttgtattgaaaattgagggtaattttggaaagaggtaaagccagcccaaaagagctaaaagaggttattttctttatatatagta 17439064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 4578065 - 4578145
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||||| |||||||||||||||||| ||||||| ||||||| |||||| | || ||||||||||| |||||||||||    
T  4578065 aaaattgagggtatttttggaaagagaaaa-gtcagcccaaaagagatgaaagtgattgttttctttatatatagtatagat 4578145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 5907531 - 5907622
Alignment:
Q  167 atttgtattaaaatt-gagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatg 258  Q
    ||||||||||||||| ||| ||||||||| |||||||||| ||| ||| |||| ||||||||| |||| ||||||||||| ||||||||||||    
T  5907531 atttgtattaaaatttgagagcatttttgaaaagagaaaa-gtcggcccaaaaaagctgaaaggggttgttttctttatatatagtatagatg 5907622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 26130428 - 26130340
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||| |||||||| |||||||||||||||||||||||||| |  ||||| |||||||| |||| |||||||| || ||||||||    
T  26130428 atttgtattgaaaattgatggcatttttggaaagagaaaaagtcaacacaaaagtgctgaaaggggttgttttctttgtatatagtata 26130340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 22922070 - 22922023
Alignment:
Q  1 atcactctttgtacgataaaagtatgtggaataatatttggtatcttg 48  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  22922070 atcactctttgtacgataaaagtatgtgcaataatatttggtatcttg 22922023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 24487662 - 24487571
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||||||| |||||||  |||||||||||||| ||||||||||||| |||   ||| ||||||||||| |||||||||||    
T  24487662 atttgtattgaaaattgaggacattttttaaaagagaaaaagtcggcctaaaagagcttaaatgagttgttttctttatatatagtatagat 24487571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 178 - 257
Target Start/End: Complemental strand, 45885730 - 45885651
Alignment:
Q  178 aattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||| | ||||||| |||||||||||||||| || ||||||| ||||||| ||||||||||||||| ||| |||||||    
T  45885730 aattgaagacattttttgaaagagaaaaagtcaacccaaaagagttgaaagatgttattttctttatatataatatagat 45885651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 177 - 254
Target Start/End: Original strand, 22129615 - 22129692
Alignment:
Q  177 aaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||||||| |||||||| |||||| |||| || ||||||| |||||| |||| ||||||||||| ||||||||    
T  22129615 aaattgagggcatgtttggaaatagaaaatgtcaacccaaaagagttgaaaggggttcttttctttatatatagtata 22129692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 174 - 243
Target Start/End: Complemental strand, 35938695 - 35938627
Alignment:
Q  174 ttaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttcttta 243  Q
    |||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||||| |||||||| ||||    
T  35938695 ttaaaattaagggcatttttggaaagag-aaaagtcagcccaaaagagttgaaagaagttattttattta 35938627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 10824078 - 10823990
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||| |||||||| |||||||||| ||||||||||||| |  | |||| |||||||||||||| || |||||||| ||||||||    
T  10824078 atttgtattgaaaattgatggcatttttgaaaagagaaaaagtaaatccaaaatagctgaaagaggttgttatctttatatatagtata 10823990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 39822869 - 39822961
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatg 258  Q
    ||||||||| ||||||||||| ||||| | ||||| ||||| ||| || ||||||||| |||||  |||||||||||||| ||||||||||||    
T  39822869 atttgtattcaaaattgagggtattttcgaaaagaaaaaaaatcaacccaaaagagctcaaagaaattattttctttatatatagtatagatg 39822961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 257
Target Start/End: Original strand, 21079056 - 21079134
Alignment:
Q  179 attgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||||||||||| ||||| |||||||||| | |||| || ||||| || ||||||||||||||  ||||||||||    
T  21079056 attgagggcatttttgaaaagaaaaaaagtcagtccaaaaaagttgaaaaagtttattttctttatatgtagtatagat 21079134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 15522339 - 15522270
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    |||||||||  |||||||||||||||||||||  |  | ||||||||||||| |||||||||||||||||    
T  15522339 aaaattgagaacatttttggaaagagaaaaagatattccaaaagagctgaaacaggttattttctttata 15522270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 21789969 - 21790030
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaa 227  Q
    ||||||||| ||||||||||||||||||||||| |||||||| ||||  |||||||||||||    
T  21789969 atttgtattgaaaattgagggcatttttggaaatagaaaaagccagctcaaaagagctgaaa 21790030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 49429588 - 49429640
Alignment:
Q  202 aaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    |||||||||||| |||||||||||||| |||| ||||||||||| ||||||||    
T  49429588 aaaaagtcagcccaaaagagctgaaaggggttgttttctttatatatagtata 49429640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 254
Target Start/End: Original strand, 10436331 - 10436407
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    |||||||||| |||||||||||||||  ||||||| || |||||||| |||||||  ||||||| ||||| ||||||||    
T  10436331 aaaattgaggacatttttggaaagag--aaagtcaacccaaaagagccgaaagagagtattttcattatatatagtata 10436407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 245
Target Start/End: Original strand, 21092219 - 21092290
Alignment:
Q  174 ttaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||||||| ||||||| ||| ||||||||||||||  ||||||||||||  | || |||||||||||    
T  21092219 ttaaaattgagggtatttttgaaaaaagaaaaagtcagccccaaagagctgaaatggattgttttctttata 21092290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 35379721 - 35379637
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagta 252  Q
    ||||||||| ||||||||||||| ||||| |||||  ||||  ||||| ||||||||| ||||||||| ||||||||||| ||||||    
T  35379721 atttgtattgaaaattgagggcaattttgaaaaga--aaaatccagcccaaaagagctaaaagaggttgttttctttatatatagta 35379637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 42392149 - 42392240
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||||||  |||||||  ||||||||||||||| || |||| || ||||||  ||||||||||||||| ||| |||||||    
T  42392149 atttgtattgaaaattgagaacattttttaaaagagaaaaagtcaacccaaaaaagttgaaaggagttattttctttatatatactatagat 42392240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 49429410 - 49429453
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaag 219  Q
    ||||||||| |||||||||||||||||||||||||||| |||||    
T  49429410 aaaattgagagcatttttggaaagagaaaaagtcagcccaaaag 49429453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 9861592 - 9861507
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagta 252  Q
    ||||||||| |||||| |||||||||| | ||| |||||||  ||||| |||||||||||||| |||| ||||||||||| ||||||    
T  9861592 atttgtattcaaaattaagggcattttcgaaaa-agaaaaatccagccaaaaagagctgaaaggggttgttttctttatatatagta 9861507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 12565767 - 12565844
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaa-gtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||||| || |||||||||||||||| ||||||  ||||||||||     |||||||||||||||| |||||||||||    
T  12565767 aaaattgagggtatatttggaaagagaaaaaagtcagcgcaaaagagctg-----ggttattttctttatatatagtatagat 12565844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 13260170 - 13260247
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaa-gtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||||| || |||||||||||||||| ||||||  ||||||||||     |||||||||||||||| |||||||||||    
T  13260170 aaaattgagggtatatttggaaagagaaaaaagtcagcgcaaaagagctg-----ggttattttctttatatatagtatagat 13260247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 256
Target Start/End: Original strand, 45702292 - 45702373
Alignment:
Q  174 ttaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtataga 256  Q
    ||||||||||||  ||||||  |||||||||||||| ||  |||||| |||||| | ||||||||||||||| ||||||||||    
T  45702292 ttaaaattgaggatatttttaaaaagagaaaaagtctgctgaaaagaactgaaa-atgttattttctttatatatagtataga 45702373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 267
Target Start/End: Original strand, 51834010 - 51834108
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatgatttttg 265  Q
    ||||||||| ||||||||||| |||||||||||||  |||| |||||| | ||| |||||||| ||| |||||||||||| ||| |||| || |||||||    
T  51834010 atttgtattgaaaattgagggtatttttggaaaga--aaaattcagcccagaagtgctgaaaggggtaattttctttatatatactatatat-atttttg 51834106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 9861062 - 9861146
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatag 250  Q
    ||||||||| ||||||||||||||||||| ||| ||||||| ||| || ||||| |||||||  | || ||||||||||| ||||    
T  9861062 atttgtattgaaaattgagggcatttttgaaaaaagaaaaactcaacccaaaagtgctgaaatggattgttttctttatatatag 9861146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 18722384 - 18722473
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||||| ||||||||||  ||||||| ||| |||||||  |||||||| |||  ||||||||||| || ||||||||    
T  18722384 atttgtattgaaaattgagggtatttttggaa--agaaaaaatcaacctaaaaatgctgaaaggggtagttttctttatatattgtatagat 18722473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 29626082 - 29626145
Alignment:
Q  190 ttttggaaagagaaaaagtcagcctaaaagagctgaaag-aggttattttctttatagatagtat 253  Q
    |||||||||||||||||||||||| ||||||| | |||| | ||||||||||||||| |||||||    
T  29626082 ttttggaaagagaaaaagtcagcccaaaagag-tcaaagcatgttattttctttatatatagtat 29626145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 19592402 - 19592481
Alignment:
Q  167 atttgtattaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatag 246  Q
    ||||||||| ||||| |  |||||||||||||||||||||  || |  ||||||| |||||||| || ||||||||||||    
T  19592402 atttgtattgaaattaaatgcatttttggaaagagaaaaatccaactcaaaagagttgaaagagattgttttctttatag 19592481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 37431338 - 37431258
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatg 258  Q
    |||||||||| |||| || ||||||  ||||||| ||| ||||||| |||||| | || ||||||||||| ||||||||||||    
T  37431338 aaaattgaggacattgttagaaaga--aaaagtccgcccaaaagagttgaaagggtttgttttctttatatatagtatagatg 37431258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 9860138 - 9860203
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttcttta 243  Q
    |||||||| |||||||||||||  |||||||  ||| | |||||||||||||| ||| ||||||||||    
T  9860138 aaaattgaaggcatttttggaa--agaaaaatccagaccaaaagagctgaaaggggtaattttcttta 9860203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 35378920 - 35378831
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||||| |||||| |||||| ||| |  || |||||||| | |||||||| | ||||||| |||| |||||||||||    
T  35378920 atttgtattgaaaattgagggtattttttgaaagaaaaata--caacctaaaagtgttgaaagagataattttctatatatatagtatagat 35378831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 35156110 - 35156019
Alignment:
Q  167 atttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||||||||| ||||||| |||||| |||||||||||    
T  35156110 atttgtattaaaaattgagggcatttttgaaaagagaaaaagccagcccaaaagagctgaaagagattattttttttatatatagtatagat 35156019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 45406803 - 45406712
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||  |  ||||||||||||||| |||||||||||||| |||||||||||    
T  45406803 atttgtattgaaaattgaggacatttttggaaagagaaaaaatcaatcctaaagagctgaaagagattattttctttatatatagtatagat 45406712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 42185111 - 42185019
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatg 258  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| | |||| ||  ||||||| |||||||||||||| ||| ||||||||    
T  42185111 atttgtattgaaaattaagggcatttttggaaagagaaaaagtcagtccaaaaaaggggaaagagattattttctttatatatattatagatg 42185019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 7603922 - 7604005
Alignment:
Q  174 ttaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||| |||    |||||||||||||| |||||||||||    
T  7603922 ttaaaattgaagccatttttggaaagagaaaaagtcagcccaaaagagctaaaatgatttattttctttataaatagtatagat 7604005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 27597128 - 27597037
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||| |||||||||||| |||||||||||| || || ||||||||||||  |||||||||||| |||| |||||||||||    
T  27597128 atttgtattgaaaattaagggcatttttgaaaagagaaaaagccaacccaaaagagctgaagtaggttattttctatatatatagtatagat 27597037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 5879987 - 5879898
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||| ||| ||||||| ||||||  |||| |||| ||||||||||||||||||||| ||||||||||| |||||||||||    
T  5879987 atttgtattgaaaattaaggacattttttgaaaga--aaaattcagtctaaaagagctgaaagaggttgttttctttatatatagtatagat 5879898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 254
Target Start/End: Original strand, 27360625 - 27360713
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||| |||||||||| ||| |||| ||| ||||||| |||| | |||||||||||||||| |||||||||||||| ||||||||    
T  27360625 atttgtattgaaaattgaggacatatttgaaaatagaaaaaatcagtccaaaagagctgaaagagattattttctttatatatagtata 27360713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 250
Target Start/End: Original strand, 22882189 - 22882263
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatag 250  Q
    |||||||||| ||||||| ||||||||||| || || | ||||||||||||||||||| ||||||||||| ||||    
T  22882189 aaaattgaggacattttttgaaagagaaaatgtaagtccaaaagagctgaaagaggttgttttctttatatatag 22882263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 21885525 - 21885606
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||| ||||| ||||||| |||||||||| ||||||| ||||||||| |||| || | ||||||||||| |||||||||||    
T  21885525 aaaatcgagggtatttttgaaaagagaaaaggtcagcccaaaagagcttaaaggggctgttttctttatatatagtatagat 21885606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 40499575 - 40499664
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||||||||||||| |||||  |||||||| || |||| |  |||||| |||||||||||||||| |||||||||||    
T  40499575 atttgtattcaaaattgagggcatttttgaaaaga--aaaagtcatcccaaaaaatttgaaaggggttattttctttatatatagtatagat 40499664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 33676960 - 33677050
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||||||||||||||| |||| ||||||||| |||  ||||||||| ||||  ||| ||||||||||| |||||||||||    
T  33676960 atttgtattgaaaattgagggcattttttgaaa-agaaaaagtaagctcaaaagagcttaaaggagttgttttctttatatatagtatagat 33677050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 20972988 - 20972934
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaaga 220  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| || ||||||    
T  20972988 atttgtattgaaaattgagggcatttttggaaagagaaaaagtcaacccaaaaga 20972934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 191 - 257
Target Start/End: Original strand, 31593779 - 31593845
Alignment:
Q  191 tttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||| ||||||||||||||||||||||| | || ||||| ||| ||||||||||| |||||||||||    
T  31593779 tttgaaaagagaaaaagtcagcctaaaaaaactaaaagaagttgttttctttatatatagtatagat 31593845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 254
Target Start/End: Original strand, 9192364 - 9192451
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||| ||||||||| |||||||| |||||||||||| | || | ||||||| ||||| | ||||||||||||||| ||||||||    
T  9192364 atttgtattgaaaattgagagcatttttagaaagagaaaaaattagtccaaaagagttgaaa-atgttattttctttatatatagtata 9192451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 24004807 - 24004886
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||| ||||||||||| ||||||| |||||||||||||||||| ||||   ||||||  |||| |||||||||||    
T  24004807 atttgtattgaaaattgagggtatttttgaaaagagaaaaagtcagcccaaaaagactgaaaagggttgttttctttata 24004886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 257
Target Start/End: Original strand, 25915449 - 25915516
Alignment:
Q  190 ttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||| ||||||||||  ||  | ||||||||| ||||||||||||||||||||| |||||||||||    
T  25915449 ttttgggaagagaaaaaaccaaaccaaaagagctaaaagaggttattttctttatatatagtatagat 25915516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 35126173 - 35126252
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||| |||||||||| |||||||  ||||||||||||||| || |||||| |||||| | |||||||||| ||||    
T  35126173 atttgtattgaaaattgaggacatttttttaaagagaaaaagtcaacccaaaagaactgaaaaaagttattttctatata 35126252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 38702457 - 38702548
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||||||||||||||||  | ||||| |||||| ||||||| | |||  |||  ||||||||||| |||||||||||    
T  38702457 atttgtattgaaaattgagggcatttttggaagaaaaaaaattcagcccaaaagagttaaaatgggtagttttctttatatatagtatagat 38702548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 42651710 - 42651632
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatag 255  Q
    |||||||| | ||||||| ||||||||||||||||    ||||||||||||| ||||| ||||||||||| |||||||||    
T  42651710 aaaattgaagacattttttgaaagagaaaaagtcatttcaaaagagctgaaa-aggttgttttctttatatatagtatag 42651632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 245
Target Start/End: Complemental strand, 10552764 - 10552707
Alignment:
Q  187 catttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||| |||||||||||| |||||| |||||||||||||||| || |||||||||||    
T  10552764 catttttagaaagagaaaaa-tcagcccaaaagagctgaaagagtttgttttctttata 10552707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 14690199 - 14690249
Alignment:
Q  203 aaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtat 253  Q
    |||||||||||||||||||| |||| | ||||||||||||||| |||||||    
T  14690199 aaaagtcagcctaaaagagcggaaacatgttattttctttatatatagtat 14690249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 255
Target Start/End: Original strand, 740973 - 741054
Alignment:
Q  174 ttaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatag 255  Q
    ||||| ||||||| | ||| | |||||||||| |||| || ||||  |||||||||| |||||||||||||| |||||||||    
T  740973 ttaaagttgagggtaatttggaaaagagaaaaggtcaacccaaaatggctgaaagagattattttctttatatatagtatag 741054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 245
Target Start/End: Complemental strand, 17372761 - 17372683
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaa-gtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||| ||||||||| ||||||||  ||||||||||| ||||||| |||||  ||||||| ||||||||||||||||    
T  17372761 atttgtattgaaaattgagagcattttttaaaagagaaaaaagtcagcccaaaag--ctgaaaggggttattttctttata 17372683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 245
Target Start/End: Complemental strand, 1110900 - 1110820
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaa-gtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||| |||||||| | |||||||||||||| ||||| | ||||| ||||||||||||||| ||  |||||||||||    
T  1110900 atttgtattgaaaattgatgacatttttggaaagaaaaaaaaggcagcccaaaagagctgaaagatgtcgttttctttata 1110820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 186 - 257
Target Start/End: Complemental strand, 15508370 - 15508299
Alignment:
Q  186 gcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||| ||||||| |||||| |||| |||| |||| |||  ||||| |||||||||| |||||||||||    
T  15508370 gcatttttagaaagagtaaaagtaagcccaaaacagcttaaacgggttactttctttatatatagtatagat 15508299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 257
Target Start/End: Complemental strand, 36214100 - 36214012
Alignment:
Q  168 tttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||||||| || |||| |||||||||||||  |||| || ||||||||| |||||||||| |  ||||||||||| ||| |||||||    
T  36214100 tttgtattaaaaattaagggtatttttggaaaga--aaaattctgcctaaaagtgctgaaagagatagttttctttatatataatatagat 36214012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 39271859 - 39271938
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||| ||||||||| | ||||||||||||||||||| ||| || ||||  |||||||| | || |||||||||||    
T  39271859 atttgtattgaaaattgagagtatttttggaaagagaaaaattcaacccaaaaatgctgaaagggtttgttttctttata 39271938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 257
Target Start/End: Original strand, 40324110 - 40324198
Alignment:
Q  168 tttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||||||| || |||| |||||||||||||  |||| || ||| ||||| |||||||||| |  ||||||||||| |||||||||||    
T  40324110 tttgtattaaaaattaagggtatttttggaaaga--aaaattctgcccaaaagtgctgaaagagatagttttctttatatatagtatagat 40324198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 41384806 - 41384897
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||| | ||| ||||||| ||||||||  ||   ||||||||||||| | |||||||||||| || |||||||||||    
T  41384806 atttgtattgaaaattgagagtattgttggaaaaagaaaaagctaggtcaaaagagctgaaaaatgttattttctttgtatatagtatagat 41384897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 21920194 - 21920152
Alignment:
Q  215 aaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||| ||||||||||||||||||||||| |||| ||||||    
T  21920194 aaaagagttgaaagaggttattttctttatatatagaatagat 21920152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 257
Target Start/End: Complemental strand, 27912903 - 27912813
Alignment:
Q  168 tttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||||||| || |||| | ||||||||||||||||| ||| || ||||||||  ||| |   ||||||||||||| |||||||||||    
T  27912903 tttgtattaaaaatttagggtaattttggaaagagaaaaaatcatcccaaaagagccaaaacaaactattttctttatatatagtatagat 27912813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 36205370 - 36205460
Alignment:
Q  167 atttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtataga 256  Q
    ||||||||||||| |||| | ||||||| |||||| ||||| ||||   ||||||| | ||| | ||||||||||||||| ||||||||||    
T  36205370 atttgtattaaaaattgaagacattttttgaaagaaaaaaattcagttcaaaagagttaaaataagttattttctttatatatagtataga 36205460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 42651403 - 42651457
Alignment:
Q  201 gaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatag 255  Q
    ||||||||||  | ||||||||||||||| ||| ||||||||||| |||||||||    
T  42651403 gaaaaagtcattccaaaagagctgaaagaagttgttttctttatatatagtatag 42651457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 35958571 - 35958502
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    |||||||||| |||||||| ||  | |||||||||||| ||| ||||||||| | ||| |||||||||||    
T  35958571 aaaattgaggacatttttgaaagaaaaaaaagtcagcccaaatgagctgaaaaatgttgttttctttata 35958502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 176 - 254
Target Start/End: Complemental strand, 17352942 - 17352864
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| ||||||||||| ||||||||    
T  17352942 aaaattgagggcatttttggaaagagaaaaagtcagcccaaaagaggtgaaaggggttgttttctttatatatagtata 17352864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 14965078 - 14964985
Alignment:
Q  166 aatttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatg 258  Q
    |||||||||| |||||||| ||||||||| ||||||||||||| ||  | |||||||||||||  |||||||||||||||| ||||||||||||    
T  14965078 aatttgtattgaaaattgaaggcatttttagaaagagaaaaagacattccaaaagagctgaaaagggttattttctttatatatagtatagatg 14964985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 167 - 254
Target Start/End: Original strand, 32333511 - 32333599
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||  |||| |||| |||| | |||||||||||||| ||||||||    
T  32333511 atttgtattgaaaattgagggcatttttgaaaagagaaaaagtcagctcaaaaaagctaaaagggattattttctttatatatagtata 32333599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 254
Target Start/End: Original strand, 18625273 - 18625351
Alignment:
Q  174 ttaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    |||||||||||| | ||||||||||||  ||||||||| | ||||||||||||||| ||| ||||||||||| || |||||    
T  18625273 ttaaaattgaggacgtttttggaaaga--aaaagtcagtccaaaagagctgaaagatgttgttttctttatatatggtata 18625351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 2595373 - 2595461
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||||| ||||||  ||||||||||| |||||| |||| | ||||||||| |||||||||||||  |||||||||||    
T  2595373 atttgtattgaaaattgagggtatttttaaaaagagaaaaaatcagcccaaaa-aactgaaagagattattttctttat--atagtatagat 2595461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 254
Target Start/End: Original strand, 17259690 - 17259778
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||| |||||||||| ||||||| |||||||||||| |  ||| || |||||| ||||| | ||||||||||||| ||||||||    
T  17259690 atttgtattcaaaattgaggacattttttgaaagagaaaaaatatgcccaacagagctaaaagatgatattttctttatatatagtata 17259778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 23124266 - 23124178
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||| |||||| |||| | ||||||||||||||||||||| || |||||| |  ||| | ||||||||||||||| ||||||||    
T  23124266 atttgtattgaaaattaagggtaattttggaaagagaaaaagtcatcccaaaagaaccaaaacatgttattttctttatatatagtata 23124178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 262
Target Start/End: Original strand, 34352623 - 34352719
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatgattt 262  Q
    ||||||||| |||||||| | |||||||| || ||||||||  ||||||||||||| ||||  | |||||||||||| || ||||||||||| ||||    
T  34352623 atttgtattgaaaattgaagacatttttgtaacgagaaaaaaacagcctaaaagagttgaagtatgttattttctttgtacatagtatagataattt 34352719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 250
Target Start/End: Original strand, 3103503 - 3103586
Alignment:
Q  168 tttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatag 250  Q
    |||||||| ||||||||  ||||||||| |||| ||||||||||||||||||||||| |||   ||| ||||||||||| ||||    
T  3103503 tttgtattcaaaattgaaagcatttttgaaaagggaaaaagtcagcctaaaagagcttaaatgagtttttttctttatatatag 3103586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 255
Target Start/End: Complemental strand, 32530854 - 32530776
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatag 255  Q
    |||||| |||||||||||| ||||||||||||||| || ||| || ||||| || |||||||| |||||| |||||||||    
T  32530854 aaaattaagggcatttttgaaaagagaaaaagtcatcccaaatgaactgaatga-gttattttatttatatatagtatag 32530776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 10459969 - 10459880
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||||| |||||||||| |||||  ||||| ||| | ||||||||||||||| | | ||||||||| | |||||||||||    
T  10459969 atttgtattcaaaattgatggcatttttgtaaaga--aaaagacagtccaaaagagctgaaagatggtgttttctttacatatagtatagat 10459880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 12170175 - 12170239
Alignment:
Q  190 ttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||||||||||| ||||||||||||||   ||| | | ||||||||||||| ||||||||    
T  12170175 ttttggaaagagaaaaattcagcctaaaagagtctaaatatgctattttctttatatatagtata 12170239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 30233140 - 30233052
Alignment:
Q  167 atttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||||||| ||||||  ||||||| |||||||||||  ||| | |||||| || || || ||||||||||||||| ||||||||    
T  30233140 atttgtattaaaaattgaggctatttttgaaaagagaaaaaaccagtccaaaagaactaaaggaagttattttctttatatatagtata 30233052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 256
Target Start/End: Complemental strand, 17829584 - 17829530
Alignment:
Q  202 aaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtataga 256  Q
    |||||||||||| |||||||| |||| | | ||||||||||||| ||||||||||    
T  17829584 aaaaagtcagcccaaaagagccgaaacatgctattttctttatacatagtataga 17829530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 257
Target Start/End: Complemental strand, 25056370 - 25056303
Alignment:
Q  188 atttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||||||||  |||| |||||| |||||| |||||||||||   |||||||||| |||||||||||    
T  25056370 atttttggaaaga--aaaattcagcccaaaagaactgaaagaggtagctttctttatatatagtatagat 25056303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 14910083 - 14910165
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatag 250  Q
    ||||||||| ||||||||||| ||||||| |||||  |||| |||| | ||||| ||||||||||||  ||||||||||| ||||    
T  14910083 atttgtattgaaaattgagggtatttttgaaaaga--aaaattcagtccaaaagtgctgaaagaggtagttttctttatatatag 14910165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 29744634 - 29744682
Alignment:
Q  196 aaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    |||||||||||| |||| ||||||||||||||| | ||||||||||||||    
T  29744634 aaagagaaaaagacagcttaaaagagctgaaag-gattattttctttata 29744682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 176 - 256
Target Start/End: Original strand, 31094 - 31174
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtataga 256  Q
    |||||| |||| |||||||||||||||||||||||| | |||| ||||||| |||||||||||||||||| || |||||||    
T  31094 aaaattaagggaatttttggaaagagaaaaagtcaggccaaaaaagctgaaggaggttattttctttatatatggtataga 31174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 5e-19; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 176 - 256
Target Start/End: Original strand, 31283717 - 31283797
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtataga 256  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| |||   |||| |||||||||| ||||||||||    
T  31283717 aaaattgagggcatttttggaaagagaaaaagtcaacccaaaagagcttaaatgagttactttctttatatatagtataga 31283797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 167 - 264
Target Start/End: Original strand, 27241341 - 27241439
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatgattttt 264  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| || |||  |||||||| |||   ||| |||||| ||||||||||| ||||||    
T  27241341 atttgtattgaaaattgagggcatttttggaaagagaaaaagtcagtctgaaaatgctgaaagtggtagctttatttatatatagtatagataattttt 27241439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 29366720 - 29366795
Alignment:
Q  168 tttgtattaaaatt-gagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttcttt 242  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||| |||| ||||||||| |||  ||||||||    
T  29366720 tttgtattgaaatttgagggcatttttggaaagagaaaaagtcagcccaaaatagctgaaagtggtggttttcttt 29366795  T

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Target: chr7; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 36610129 - 36610208
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||| ||||||||  | ||||||| |||||||||||||||| | ||||||||||||||| |||||||||||||||    
T  36610129 atttgtattgaaaattgaatgtatttttgaaaagagaaaaagtcagtccaaaagagctgaaagatgttattttctttata 36610208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 25489701 - 25489640
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaa 227  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||    
T  25489701 atttgtattgaaaattgagggcatttttgaaaagagaaaaagtcagctcaaaagagctgaaa 25489640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 34729024 - 34728943
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||||||||||||| ||||||||||||||||   ||||||| |||||   ||||||||||||||| ||||| |||||    
T  34729024 aaaattgagggcatttttgcaaagagaaaaagtcagttcaaaagagttgaaatgagttattttctttatatatagtttagat 34728943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 245
Target Start/End: Complemental strand, 20536207 - 20536127
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcct-aaaagagctgaaagaggttattttctttata 245  Q
    ||||||||| |||||||| | ||||||| ||||| |||||||||||||| |||||||||||||  ||||||||||||||||    
T  20536207 atttgtattgaaaattgaagacatttttagaaagggaaaaagtcagcctaaaaagagctgaaaatggttattttctttata 20536127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 39618554 - 39618467
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||| |||||||||| ||||||||||| ||||||||||||||| |||| ||||| ||| |||| ||||||| ||| ||||||||    
T  39618554 atttgtattgaaaattgaggacatttttggaatgagaaaaagtcagcccaaaatagctg-aaggggttgttttcttaatatatagtata 39618467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 28959132 - 28959222
Alignment:
Q  167 atttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||||||| || | |||||||||| ||| ||||||||||| ||||||||||  |||||| ||| ||||||||||| |||||||||||    
T  28959132 atttgtattaaaaattaaaggcatttttgaaaaaagaaaaagtcaacctaaaagagtcgaaaga-gttgttttctttatatatagtatagat 28959222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 4676342 - 4676423
Alignment:
Q  177 aaattgagggcatttttggaaagagaaaaagtcagcctaaaa-gagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||| | || ||||||||||| ||||| |||||| |||| |||||||||  |||||||||||||||| |||||||||||    
T  4676342 aaattgaagacagttttggaaagaaaaaaattcagcccaaaaagagctgaaaagggttattttctttatatatagtatagat 4676423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 8801308 - 8801251
Alignment:
Q  202 aaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagatga 259  Q
    |||||||||||| |||| || ||||||| ||||||||||||||| |||||||||||||    
T  8801308 aaaaagtcagcccaaaaaagttgaaagaagttattttctttatatatagtatagatga 8801251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 20034795 - 20034707
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||||| |||||||||||||   |||  || || ||||||||||||||||||  ||||||||||| |||||||||||    
T  20034795 atttgtattgaaaattgagggaatttttggaaaga---aaatccaacccaaaagagctgaaagaggtagttttctttatatatagtatagat 20034707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 48629137 - 48629214
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttcttta 243  Q
    ||||||||| |||||||| ||||||||| ||||||||||||| ||  | ||||||||| |||||| ||||||||||||    
T  48629137 atttgtattgaaaattgaaggcattttttgaaagagaaaaagacaatccaaaagagcttaaagagattattttcttta 48629214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 23050308 - 23050244
Alignment:
Q  174 ttaaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttatttt 238  Q
    ||||||||||||  |||||||||||||||||||||||| |||||  |||||||||| ||| ||||    
T  23050308 ttaaaattgaggatatttttggaaagagaaaaagtcagtctaaagtagctgaaagaagttttttt 23050244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 37732221 - 37732313
Alignment:
Q  167 atttgtatt-aaaattgagggcatt-tttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||  ||||| ||| |||||||||||| |||||| |||||| |||||||| ||| ||||||||||  |||||||||||    
T  37732221 atttgtattgaaaattgacagcattattttgaaagagaaaaattcagccaaaaagaactgaaagatgttgttttctttatgtatagtatagat 37732313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 10040248 - 10040158
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||||| | |||||||| |||| ||||| | ||||  ||||||||||||||| ||||| ||||||||| |||||||||||    
T  10040248 atttgtattgaaaattgatgacatttttgaaaagggaaaagg-cagctcaaaagagctgaaagaagttatattctttatatatagtatagat 10040158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 15994866 - 15994925
Alignment:
Q  195 gaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||||| |||| || ||||||||| ||||| ||||||||||||||| ||||||||    
T  15994866 gaaagagaaaatgtcaacccaaaagagctaaaagatgttattttctttatatatagtata 15994925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 20149498 - 20149577
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||| ||||||||||||||||||||||  | |||| ||||| | ||||||| ||||||| |||||||||| ||||    
T  20149498 atttgtattgaaaattgagggcatttttggaagaaaaaaatgtcagtccaaaagaggtgaaagatgttattttctctata 20149577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 39786374 - 39786283
Alignment:
Q  167 atttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||| ||||||| | |||||||||||||||||||||||| |||||||    || | | ||||||||||||| |||||||||||    
T  39786374 atttgtattgaaagttgagggtagttttggaaagagaaaaagtcagcccaaaagagtcagaacatgctattttctttatatatagtatagat 39786283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 2475321 - 2475383
Alignment:
Q  190 ttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagta 252  Q
    ||||||||||| |||||||| ||  ||| |||||||||||| |||||||||||||| ||||||    
T  2475321 ttttggaaagataaaaagtcggctcaaatgagctgaaagagattattttctttatatatagta 2475383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 27241231 - 27241293
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaag 228  Q
    ||||||||| ||||||||| ||||||| ||||||| |||||||||||||||||| ||| ||||    
T  27241231 atttgtattgaaaattgagtgcattttcggaaagaaaaaaagtcagcctaaaagtgcttaaag 27241293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 20045206 - 20045120
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||||||| ||||||||||| |||||||||||||  |||| ||| || ||||||||| |||| |||  ||||||||||| ||||||||    
T  20045206 atttgtattgaaaattgagggaatttttggaaaga--aaaattcaacccaaaagagctaaaaggggtagttttctttatatatagtata 20045120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 256
Target Start/End: Complemental strand, 4550193 - 4550114
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtataga 256  Q
    |||||| |||| |||||| ||||| |||||| |||||| ||||| | ||||||||||  ||||||||||| ||||||||||    
T  4550193 aaaatttagggtatttttcgaaag-gaaaaattcagcccaaaagtgttgaaagaggtagttttctttatatatagtataga 4550114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 31176629 - 31176549
Alignment:
Q  177 aaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||||||||||||||| | | ||||||| |||| ||||||||| |||  | || |||||||| || |||||||||||    
T  31176629 aaattgagggcatttttggagaaaaaaaaagttagcccaaaagagcttaaacggattgttttctttgtatatagtatagat 31176549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 38175314 - 38175403
Alignment:
Q  167 atttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||||||| |||||| ||||||| ||| ||  ||||||||||| |||| || ||||||||||| |||| ||| || |||||||||||    
T  38175314 atttgtattaaaaattgaggacattttttgaagga--aaaagtcagcccaaaaaagatgaaagaggttgttttttttgtatatagtatagat 38175403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 1766689 - 1766599
Alignment:
Q  167 atttgtattaaaa-ttgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||| |||| | ||||||||||||||||||| ||||| | ||| || || |||| |||||||||||||||| || ||||||||    
T  1766689 atttgtattgaaagttgatgacatttttggaaagagaaaacgtcagtccaaatgaacttaaag-ggttattttctttatatatggtatagat 1766599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 7809634 - 7809543
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| |||||||| |||| ||||| || ||||||||| || || ||||||||  ||| ||| ||||||||| ||| |||||||||||    
T  7809634 atttgtattgaaaattgaaggcaattttgtaaggagaaaaagacaacccaaaagagccaaaataggctattttcttaatatatagtatagat 7809543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 245
Target Start/End: Complemental strand, 9334541 - 9334462
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||| ||||||||||| | ||||| |||||||||| ||||||| |||||||   ||| | |||||||||||||||    
T  9334541 atttgtattgaaaattgagggtaattttgaaaagagaaaatgtcagcccaaaagagtcaaaacatgttattttctttata 9334462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 21993728 - 21993775
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcc 213  Q
    ||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  21993728 atttgtattgaaaattgagggtatttttagaaagagaaaaagtcagcc 21993775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 48525765 - 48525710
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagag 221  Q
    ||||||||| ||||||||||| ||||||||||| |||||||||||||  |||||||    
T  48525765 atttgtattgaaaattgagggtatttttggaaaaagaaaaagtcagctcaaaagag 48525710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 7956944 - 7957023
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||||||| |||||||||||||  ||||||| |||||| ||||||| |||||| ||||  ||| |||||| |||| ||||||    
T  7956944 aaaattgaaggcatttttggaa--agaaaaattcagcccaaaagagttgaaaggggtttatttatttatatatagaatagat 7957023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 250
Target Start/End: Complemental strand, 14244030 - 14243956
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatag 250  Q
    ||||||||| | ||||||||||||||||| |||||  | ||||||| | ||| | ||||||||||||||| ||||    
T  14244030 aaaattgagagtatttttggaaagagaaatagtcactccaaaagagtttaaataagttattttctttatatatag 14243956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 17255217 - 17255139
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||||||  |||||||| ||||| |||| ||||||||  ||||  |||||||||| |||||||||||    
T  17255217 aaaattgagagcatttttggaa--agaaaaagccagcccaaaaaagctgaaacgggtt-gtttctttatatatagtatagat 17255139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 27509424 - 27509382
Alignment:
Q  215 aaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||    
T  27509424 aaaagagttgaaagacgttattttctttatatatagtatagat 27509382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 243
Target Start/End: Complemental strand, 25834364 - 25834287
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttcttta 243  Q
    ||||||||| |||||| | |||||||||| ||||||||||||||| || |||| |  |||||| | ||||||||||||    
T  25834364 atttgtattgaaaatttaaggcatttttgaaaagagaaaaagtcaacccaaaataattgaaagggattattttcttta 25834287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 41747970 - 41748047
Alignment:
Q  167 atttgtattaaaattgagggcatttttggaaagagaaaaagtcagcct-aaaagagctgaaagaggttattttcttta 243  Q
    |||| ||||||||||||||||||||| | ||| |||||||  ||  || ||||||||| ||||| |||||||||||||    
T  41747970 atttatattaaaattgagggcattttcgaaaaaagaaaaaagcaaactcaaaagagcttaaagaagttattttcttta 41748047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 46671314 - 46671382
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    |||||| |||| ||||||| |||||||||||  ||||||||||||| |||| || ||| |||||||||||    
T  46671314 aaaattaagggtatttttgtaaagagaaaaatccagcctaaaagaggtgaacga-gttgttttctttata 46671382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 2275928 - 2276005
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||| ||||||||||||||||||||||  ||||||| || ||| ||| | | ||||||||||  |||||||||||    
T  2275928 atttgtattgaaaattgagggcatttttggaa--agaaaaattcggcccaaacgtgttgaaagaggtagttttctttata 2276005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 14553765 - 14553817
Alignment:
Q  202 aaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtata 254  Q
    ||||| ||| || ||||||||| ||||| ||||||||||||||| ||||||||    
T  14553765 aaaaaatcaacccaaaagagctaaaagatgttattttctttatatatagtata 14553817  T

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Target: scaffold0014 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 21335 - 21426
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||||||||||||| |||  ||||||  |||||  |||||||||||| | ||||||||||||||| |||||||||||    
T  21335 atttgtattgaaaattgagggcatttttgaaaattgaaaaatccagccccaaagagctgaaaaaagttattttctttatatatagtatagat 21426  T

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Target: scaffold0196 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 245
Target Start/End: Original strand, 9413 - 9492
Alignment:
Q  167 atttgtattaaaat-tgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    |||||||||||||| |||||||||||||| ||||||||||||   ||  ||||||||||||| | |||||||||||||||    
T  9413 atttgtattaaaatgtgagggcatttttgaaaagagaaaaagcatgctcaaaagagctgaaaaatgttattttctttata 9492  T

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Target: scaffold0196; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 245
Target Start/End: Original strand, 8450 - 8499
Alignment:
Q  196 aaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttata 245  Q
    ||||||||||| ||| || |||||||||||||| ||||||||||||||||    
T  8450 aaagagaaaaaatcatcccaaaagagctgaaaggggttattttctttata 8499  T

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Target: scaffold0543 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 5109 - 5020
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||| | ||||||| ||||||||||||||| || ||||||| |||||   ||||||||||||||  |||||||||||    
T  5109 atttgtattgaaaattgagagtatttttgaaaagagaaaaagtcatcccaaaagagttgaaatgagttattttctttat--atagtatagat 5020  T

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Target: scaffold0492 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 167 - 257
Target Start/End: Complemental strand, 6655 - 6566
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    ||||||||| ||||||||| | ||||||| ||||||||||||||| || ||||||| |||||   ||||||||||||||  |||||||||||    
T  6655 atttgtattgaaaattgagagtatttttgaaaagagaaaaagtcatcccaaaagagttgaaatgagttattttctttat--atagtatagat 6566  T

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Target: scaffold0888 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 1260 - 1342
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatag 250  Q
    ||||||||| ||||||||||||||||||||||  ||||||| |||||| ||||||||||| |  |||| |||||| |||| ||||    
T  1260 atttgtattcaaaattgagggcatttttggaa--agaaaaattcagcccaaaagagctgagaagggttgttttctatatacatag 1342  T

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Target: scaffold1578 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1578
Description:

Target: scaffold1578; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 1396 - 1335
Alignment:
Q  167 atttgtatt-aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaa 227  Q
    ||||||||| |||||||| |||||||| | ||||||||||| |||||  |||||||||||||    
T  1396 atttgtattgaaaattgatggcattttcgaaaagagaaaaactcagctcaaaagagctgaaa 1335  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 254445 - 254365
Alignment:
Q  176 aaaattgagggcatttttggaaagagaaaaagtcagcctaaaagagctgaaagaggttattttctttatagatagtatagat 257  Q
    |||| |||||| ||||||| ||||| ||||| |||||  ||||| |||||||| |||  ||||||||||| |||||||||||    
T  254445 aaaactgagggtatttttgaaaaga-aaaaattcagctcaaaagtgctgaaaggggtagttttctttatatatagtatagat 254365  T

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