View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19216_high_25 (Length: 290)
Name: NF19216_high_25
Description: NF19216
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19216_high_25 |
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Alignment Details
Target: chr8 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 14 - 272
Target Start/End: Original strand, 28777801 - 28778059
Alignment:
| Q |
14 |
aatatcaatctttagttctttatttcgcgtgtcgacgtaaaacacacaaatttggttgggttggggagcagaagttaacgtgaaggtgaaggtagtatat |
113 |
Q |
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| T |
28777801 |
aatatcaatctttagttctttatttcgcgtgtcgacgtaaaacacacaaatttggttgggttggggagcagaagttaacgtgaaggtgaaggtagtatat |
28777900 |
T |
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| Q |
114 |
aagaacaaagaagaacaagtgtcacccttcacatgttttgccttatccttcataaacccccaaacttcaaagctaaaaacacaaaacaataaataagctg |
213 |
Q |
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| T |
28777901 |
aagaacagagaagaacaagtgtcacccttcacatgttttgccttatccttcataaacccccaaacttcaaagctaaaaacacaaaacaataaataagctg |
28778000 |
T |
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| Q |
214 |
agagcgaaacgtgaaaaatcaacaagcacaaaatattatgtgagccacaacagcccaac |
272 |
Q |
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| T |
28778001 |
agagcgaaacgtgaaaaatcaacaagcacaaaatattatgtgagccacaacagcccaac |
28778059 |
T |
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