View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19216_low_21 (Length: 314)

Name: NF19216_low_21
Description: NF19216
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19216_low_21
NF19216_low_21
[»] scaffold0017 (1 HSPs)
scaffold0017 (15-295)||(42111-42391)
[»] scaffold0833 (1 HSPs)
scaffold0833 (15-295)||(1505-1785)
[»] chr7 (8 HSPs)
chr7 (15-295)||(47482484-47482764)
chr7 (15-295)||(48623926-48624204)
chr7 (147-294)||(3048213-3048361)
chr7 (149-295)||(13319783-13319930)
chr7 (15-141)||(13319618-13319742)
chr7 (236-293)||(7286095-7286153)
chr7 (205-295)||(25122770-25122860)
chr7 (209-295)||(9641498-9641585)
[»] chr5 (7 HSPs)
chr5 (15-295)||(7527470-7527750)
chr5 (149-295)||(17908164-17908310)
chr5 (149-295)||(32949594-32949741)
chr5 (194-295)||(23985927-23986028)
chr5 (240-295)||(25003455-25003510)
chr5 (205-295)||(2030372-2030462)
chr5 (50-141)||(32949463-32949553)
[»] chr8 (7 HSPs)
chr8 (111-295)||(18617413-18617597)
chr8 (147-294)||(21495839-21495987)
chr8 (147-295)||(22884945-22885094)
chr8 (15-132)||(21496035-21496150)
chr8 (205-290)||(41508724-41508809)
chr8 (205-295)||(45476021-45476112)
chr8 (209-273)||(20708244-20708308)
[»] chr2 (9 HSPs)
chr2 (107-295)||(17202990-17203178)
chr2 (107-295)||(28032636-28032823)
chr2 (148-295)||(22254786-22254934)
chr2 (149-288)||(25254853-25254993)
chr2 (147-295)||(23779454-23779604)
chr2 (175-295)||(32464398-32464519)
chr2 (15-141)||(25255034-25255158)
chr2 (18-141)||(22254625-22254746)
chr2 (188-295)||(16294375-16294483)
[»] scaffold0335 (1 HSPs)
scaffold0335 (149-292)||(9676-9819)
[»] scaffold0207 (2 HSPs)
scaffold0207 (147-295)||(16432-16581)
scaffold0207 (15-141)||(16268-16393)
[»] chr3 (16 HSPs)
chr3 (147-295)||(14283791-14283940)
chr3 (149-295)||(9304275-9304422)
chr3 (147-295)||(23887717-23887866)
chr3 (147-291)||(38166532-38166677)
chr3 (149-295)||(11987696-11987843)
chr3 (149-292)||(17936729-17936874)
chr3 (15-141)||(11480798-11480923)
chr3 (147-295)||(11480610-11480759)
chr3 (147-295)||(12903406-12903556)
chr3 (15-141)||(23887905-23888030)
chr3 (205-295)||(51962757-51962847)
chr3 (15-132)||(14283628-14283743)
chr3 (16-141)||(11987884-11988008)
chr3 (236-294)||(18738360-18738419)
chr3 (205-273)||(11636956-11637024)
chr3 (15-132)||(5227014-5227130)
[»] scaffold0125 (1 HSPs)
scaffold0125 (149-295)||(29960-30107)
[»] chr6 (10 HSPs)
chr6 (147-294)||(16301636-16301782)
chr6 (147-295)||(32278148-32278297)
chr6 (153-295)||(29664706-29664849)
chr6 (183-295)||(14150999-14151112)
chr6 (15-141)||(32278336-32278461)
chr6 (187-290)||(27739537-27739642)
chr6 (15-132)||(29664535-29664652)
chr6 (236-295)||(26523726-26523786)
chr6 (209-295)||(19670935-19671022)
chr6 (205-295)||(31469170-31469261)
[»] scaffold0342 (1 HSPs)
scaffold0342 (147-295)||(2200-2349)
[»] scaffold0032 (3 HSPs)
scaffold0032 (15-135)||(110065-110185)
scaffold0032 (147-295)||(14976-15125)
scaffold0032 (98-145)||(15160-15207)
[»] scaffold0029 (2 HSPs)
scaffold0029 (147-295)||(67211-67360)
scaffold0029 (23-145)||(67395-67516)
[»] chr4 (13 HSPs)
chr4 (147-295)||(9793809-9793958)
chr4 (161-295)||(32462063-32462198)
chr4 (147-295)||(22736983-22737131)
chr4 (149-295)||(23271706-23271853)
chr4 (192-295)||(14503115-14503219)
chr4 (147-295)||(8043501-8043651)
chr4 (236-295)||(55378399-55378459)
chr4 (15-141)||(23271894-23272020)
chr4 (17-141)||(8043340-8043462)
chr4 (15-129)||(32462266-32462380)
chr4 (15-76)||(14503300-14503360)
chr4 (98-145)||(9793727-9793774)
chr4 (209-295)||(13595660-13595747)
[»] scaffold0066 (2 HSPs)
scaffold0066 (149-295)||(44551-44698)
scaffold0066 (149-295)||(52747-52894)
[»] scaffold0162 (3 HSPs)
scaffold0162 (161-295)||(17721-17855)
scaffold0162 (205-295)||(9627-9717)
scaffold0162 (15-141)||(17542-17668)
[»] scaffold0001 (1 HSPs)
scaffold0001 (188-295)||(166000-166107)
[»] scaffold0173 (2 HSPs)
scaffold0173 (148-293)||(3930-4075)
scaffold0173 (15-141)||(3765-3890)
[»] scaffold1486 (1 HSPs)
scaffold1486 (149-295)||(1422-1569)
[»] scaffold0023 (1 HSPs)
scaffold0023 (149-295)||(58059-58206)
[»] scaffold1666 (1 HSPs)
scaffold1666 (147-295)||(1101-1251)
[»] scaffold0615 (1 HSPs)
scaffold0615 (147-295)||(7622-7772)
[»] scaffold0012 (1 HSPs)
scaffold0012 (139-295)||(35353-35507)
[»] scaffold0132 (1 HSPs)
scaffold0132 (205-295)||(12352-12442)
[»] scaffold0016 (1 HSPs)
scaffold0016 (215-295)||(167764-167843)
[»] scaffold0686 (2 HSPs)
scaffold0686 (205-295)||(81-171)
scaffold0686 (215-295)||(7561-7640)
[»] scaffold0561 (1 HSPs)
scaffold0561 (188-295)||(4397-4505)
[»] scaffold0165 (1 HSPs)
scaffold0165 (205-273)||(28553-28621)
[»] scaffold0258 (1 HSPs)
scaffold0258 (236-294)||(8744-8803)


Alignment Details
Target: scaffold0017 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 15 - 295
Target Start/End: Original strand, 42111 - 42391
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaa-tagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaat 113  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  42111 aggaatagcataatccaataccatgtaatgaaatcaaaatagataa-gttccatacatgcattaacaccacaatccaaatcttgccgacataaattcaat 42209  T
Q  114 gaacacatcatcatcaatattcgtcatttacacaattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccaca 213  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42210 gaacacatcatcatcaatattcgtcatttacaaaattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccaca 42309  T
Q  214 agtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    |||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42310 agtaaatcaagtaatttcacaactaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 42391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0833 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: scaffold0833
Description:

Target: scaffold0833; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 15 - 295
Target Start/End: Original strand, 1505 - 1785
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaa-tagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaat 113  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| | |||||||| | |||||||||||||||||||||    
T  1505 aggaatagcataatccaatatcatgtaatgaaatcaaaatagataaa-ttccatacatgcattaagaccacaatccaagtctcgccgacataaattcaat 1603  T
Q  114 gaacacatcatcatcaatattcgtcatttacacaattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccaca 213  Q
    |||||||||||||||||||||| ||||| | | |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  1604 gaacacatcatcatcaatattcatcattcaaaaaattaatcataacatgacaccacaattcatcaaatacaaacatcaccaataatcacgtacaaccaca 1703  T
Q  214 agtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  1704 agtacatcaagtaatttcacaactaggactcatgccacaacatgatatgatcctagacataactctatatgcatgcggtacc 1785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 15 - 295
Target Start/End: Complemental strand, 47482764 - 47482484
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaa-tagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaat 113  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||| || ||||| | |||||||||||||||||||||    
T  47482764 aggaatagcataatccaatatcatgtaatgaaatcaaaatagataaatttc-atacatgcattaacaccataatccaagtctcgccgacataaattcaat 47482666  T
Q  114 gaacacatcatcatcaatattcgtcatttacacaattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccaca 213  Q
    |||||||||||||||||||||| ||||| ||  |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  47482665 gaacacatcatcatcaatattcatcattcacgaaattaatcataacatgacaccacaattcatcaaatacaaacatcaccactaatcacgtacaaccaca 47482566  T
Q  214 agtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  47482565 agtacatcaagtaatttcacaactaggactcatgccacaacatgatatgatcctagacacaactctatatacatgcggtacc 47482484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 15 - 295
Target Start/End: Complemental strand, 48624204 - 48623926
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaatagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaatg 114  Q
    ||||||||||||  ||||||||||||||||||   ||||||||||| |||||||||||||||| || |||||||| | ||||||||||||||||||||||    
T  48624204 aggaatagcatag-ccaatatcatgtaatgaatcaaaatagataaa-ttccatacatgcattatcaccacaatccaagtctcgccgacataaattcaatg 48624107  T
Q  115 aacacatcatcatcaatattcgtcatttacacaattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaa 214  Q
    |||||||| | |||||||||| ||||| ||| |||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||    
T  48624106 aacacatctttatcaatattcatcattcacaaaattaatcataacatgacacaacaattcatcaaatacaaacatcaccgttaatcacgtacaaccacaa 48624007  T
Q  215 gtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  48624006 gtacatcaagtaatttcacaactaggactcatgccacaacatgatatgatcctagacatatctctatatgcatgcggtacc 48623926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 147 - 294
Target Start/End: Original strand, 3048213 - 3048361
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcat 246  Q
    ||||||||||||||||| || | ||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| | |||||||||||    
T  3048213 aattaatcataacatgatacaacaatccatcaaatacaaacatcaccatcaatcacttacaaccacaagtacatcaagtaatttcacaactaggactcat 3048312  T
Q  247 gccacaacatgatatgatcctagacacaac-tctatatgcatgcggtac 294  Q
    | |||  |||||||||||||||||||||||  |||||||||||||||||    
T  3048313 gtcacctcatgatatgatcctagacacaacacctatatgcatgcggtac 3048361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 149 - 295
Target Start/End: Original strand, 13319783 - 13319930
Alignment:
Q  149 ttaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgc 248  Q
    |||||||| ||||||||| | ||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||     
T  13319783 ttaatcatgacatgacacgacaatccatcaaatacaaatatcaccattaatcacttacaaccacaagtacatcaagtaatttcacaactaggactcatgt 13319882  T
Q  249 cacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    |||  ||||||||||||||||||||||| | |||||||||| ||||||    
T  13319883 cacctcatgatatgatcctagacacaacatatatatgcatgtggtacc 13319930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 13319618 - 13319742
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaatagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaatg 114  Q
    |||||||||||||||||||||| || |||||| ||||||||||||| |||||||||| ||||| || |||||||| | |||| |||||||| |||||| |    
T  13319618 aggaatagcataatccaatatcgtgcaatgaa-tcaaatagataaa-ttccatacatacattatcaccacaatccaagtctcaccgacatatattcaacg 13319715  T
Q  115 aacacatcatcatcaatattcgtcatt 141  Q
    |||||||||||||||||| || |||||    
T  13319716 aacacatcatcatcaataatcatcatt 13319742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 236 - 293
Target Start/End: Complemental strand, 7286153 - 7286095
Alignment:
Q  236 ctaggactcatgccacaa-catgatatgatcctagacacaactctatatgcatgcggta 293  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7286153 ctaggactcatgccacaatcatgatatgatcctagacacaactctatatgcatgcggta 7286095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 295
Target Start/End: Original strand, 25122770 - 25122860
Alignment:
Q  205 acaaccacaa-gtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    |||||||||| ||||||||| ||  |||| | ||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  25122770 acaaccacaatgtacatcaactacattcacaactacgactcatgccacaacatgatatgatcctagacac-accctatatgcatgcggtacc 25122860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 295
Target Start/End: Original strand, 9641498 - 9641585
Alignment:
Q  209 ccacaagtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    ||||||||| ||||| || ||||| |  ||||||||||||||||||||| ||||  ||||||||| ||  ||| ||||||||||||||    
T  9641498 ccacaagtatatcaattattttcacaattaggactcatgccacaacatggtatgtccctagacacgacacctaaatgcatgcggtacc 9641585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 170; Significance: 3e-91; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 15 - 295
Target Start/End: Original strand, 7527470 - 7527750
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaa-tagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaat 113  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||| ||| |||||| ||||| || |||||||| | |||| ||||||||||||||||    
T  7527470 aggaatagcataatccaacatcatgtaatgaaatcaaaatagataaatttc-atacatacattatcaccacaatccaagtctcaccgacataaattcaat 7527568  T
Q  114 gaacacatcatcatcaatattcgtcatttacacaattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccaca 213  Q
    ||||||| |||||||||||||| ||||| ||| ||||||||||| |||||||| | ||| ||||||||||||||||||||||||||| | |||||||| |    
T  7527569 gaacacaacatcatcaatattcatcattcacaaaattaatcatagcatgacacaacaatccatcaaatacaaacatcaccattaatcgcttacaaccata 7527668  T
Q  214 agtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    || |||| ||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7527669 agcacattaagtaatttcacaacaaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 7527750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 149 - 295
Target Start/End: Original strand, 17908164 - 17908310
Alignment:
Q  149 ttaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgc 248  Q
    |||||||| ||||||||| | ||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | |||||||||||||    
T  17908164 ttaatcatgacatgacacaacaatccatcaaatacaaacatcaccattaatcacttacaatcacaagtacatcaagtaatttcacaactaggactcatgc 17908263  T
Q  249 cacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17908264 cacaacatgatatgatcctagacacaactctatatgcatgcggtacc 17908310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 149 - 295
Target Start/End: Original strand, 32949594 - 32949741
Alignment:
Q  149 ttaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgc 248  Q
    |||||||| || |||||| | ||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||||||     
T  32949594 ttaatcatgacgtgacacaacaatccatcaaatacaaacatcaccataaatcacttacaaccacaagtacatcaagtaatttcacaactaggactcatgt 32949693  T
Q  249 cacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    |||  |||||||||||||||||||||||  ||||||||||||||||||    
T  32949694 cacctcatgatatgatcctagacacaacacctatatgcatgcggtacc 32949741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 194 - 295
Target Start/End: Complemental strand, 23986028 - 23985927
Alignment:
Q  194 attaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggta 293  Q
    |||||||| | ||||||||||||||||| | || | ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23986028 attaatcatgcacaaccacaagtacatcgaatactctcacaactaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggta 23985929  T
Q  294 cc 295  Q
    ||    
T  23985928 cc 23985927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 25003455 - 25003510
Alignment:
Q  240 gactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25003455 gactcattccacaacatgatatgatcctagacacaactctatatgcatgtggtacc 25003510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 295
Target Start/End: Original strand, 2030372 - 2030462
Alignment:
Q  205 acaaccacaa-gtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    |||||||||| ||||||||| ||  |||| | |||||||||||||||||||||||||||||||||||||| ||  | |||||||||||||||    
T  2030372 acaaccacaatgtacatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacac-accatgtatgcatgcggtacc 2030462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 32949463 - 32949553
Alignment:
Q  50 aaatagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaatgaacacatcatcatcaatattcgtcatt 141  Q
    ||||||||||| |||||||||| ||||| || |||||||| | ||||  ||||| | |||||| ||||||||||||||||||| ||||||||    
T  32949463 aaatagataaa-ttccatacatccattatcaccacaatccaagtctcatcgacagatattcaacgaacacatcatcatcaataatcgtcatt 32949553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 165; Significance: 3e-88; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 111 - 295
Target Start/End: Original strand, 18617413 - 18617597
Alignment:
Q  111 aatgaacacatcatcatcaatattcgtcatttacacaattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaacc 210  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18617413 aatgaacacatcatcatcaatattcgtcatttacaaaattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaacc 18617512  T
Q  211 acaagtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    ||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18617513 acaagtatatcaagtaatttcacaactaggactcatgccacaacatgatatgatcctagacacaactctaaatgcatgcggtacc 18617597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 147 - 294
Target Start/End: Complemental strand, 21495987 - 21495839
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcat 246  Q
    |||||||||||||||||||| | ||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||    
T  21495987 aattaatcataacatgacacaacaatccatcaagtacaaacatcaccattaatcacttacaaccacaagtacatcaagtaatttcacaactaggactcat 21495888  T
Q  247 gccacaacatgatatgatcctagacacaac-tctatatgcatgcggtac 294  Q
    | |||  |||||||||||||||||||||||  |||||||||||||||||    
T  21495887 gtcacctcatgatatgatcctagacacaacacctatatgcatgcggtac 21495839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 147 - 295
Target Start/End: Original strand, 22884945 - 22885094
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcat 246  Q
    |||||||||||||||||||| | ||| |||||| || |||||||||||| |||||| ||||||||||||||||||||||||||||| | |||||||||||    
T  22884945 aattaatcataacatgacacaacaatccatcaagtataaacatcaccatcaatcacttacaaccacaagtacatcaagtaatttcacaactaggactcat 22885044  T
Q  247 gccacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    | |||   |||||||||||||||||||||| |||||||||||| ||||||    
T  22885045 gtcaccttatgatatgatcctagacacaacatctatatgcatgtggtacc 22885094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 21496150 - 21496035
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaatagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaatg 114  Q
    ||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||| |||||| | | |||| ||| |||| |||||| |    
T  21496150 aggaatagcataatccaatatcatgtaatgaatcaaaatagataaa-ttccatacatgcattaaca-cacaattcaagtctcaccgtcatatattcaacg 21496053  T
Q  115 aacacatcatcatcaata 132  Q
    ||||||||||||||||||    
T  21496052 aacacatcatcatcaata 21496035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 290
Target Start/End: Complemental strand, 41508809 - 41508724
Alignment:
Q  205 acaaccacaa-gtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcg 290  Q
    |||||||||| ||||||||| ||  |||| | ||||||||||||||| |||||||||||||||||||||| || |||||||||||||    
T  41508809 acaaccacaatgtacatcaactacattcacaactaggactcatgccaaaacatgatatgatcctagacac-accctatatgcatgcg 41508724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 295
Target Start/End: Complemental strand, 45476112 - 45476021
Alignment:
Q  205 acaaccacaagtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactc-tatatgcatgcggtacc 295  Q
    ||||||||||||| ||||| || ||||| |  ||||||||||||||||| ||||||||  ||||||||| || | || ||||||||||||||    
T  45476112 acaaccacaagtatatcaattattttcacaattaggactcatgccacaatatgatatgcccctagacacgacacataaatgcatgcggtacc 45476021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 273
Target Start/End: Original strand, 20708244 - 20708308
Alignment:
Q  209 ccacaagtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacac 273  Q
    ||||||||| ||||| || ||||| |  ||| |||||||||||||||||||||| ||||||||||    
T  20708244 ccacaagtatatcaattattttcacaattagaactcatgccacaacatgatatgttcctagacac 20708308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 121; Significance: 5e-62; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 107 - 295
Target Start/End: Original strand, 17202990 - 17203178
Alignment:
Q  107 attcaatgaacacatcatcatcaatattcgtcatttacacaattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtac 206  Q
    ||||||||||||||||||||| || | || ||||| ||| ||||| |||||||||||||  | ||| |||||||||||||||||||| |||||||| |||    
T  17202990 attcaatgaacacatcatcattaaaaatcatcattcacaaaattagtcataacatgacataacaatccatcaaatacaaacatcacctttaatcacttac 17203089  T
Q  207 aaccacaagtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    ||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17203090 aaccacaagtacatcaaataatttcacaactaggactcatgccacaacatgatatgatcctaaacacaactctatatgcatgcggtacc 17203178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 107 - 295
Target Start/End: Complemental strand, 28032823 - 28032636
Alignment:
Q  107 attcaatgaacacatcatcatcaatattcgtcatttacacaattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtac 206  Q
    ||||||||||||||||||||| |||| || ||||| ||| ||||||||||||||| |||| | ||| ||||||| ||||||||||||||| ||||| |||    
T  28032823 attcaatgaacacatcatcattaataatcatcattcacaaaattaatcataacataacacaacaatccatcaaacacaaacatcaccattcatcacttac 28032724  T
Q  207 aaccacaagtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    | ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28032723 atccacaagtacatcaagtaa-ttcacaactaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 28032636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 148 - 295
Target Start/End: Original strand, 22254786 - 22254934
Alignment:
Q  148 attaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaattt-catagctaggactcat 246  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || | |||||||||||    
T  22254786 attaatcataacatgacacaacaatccatcaaatacaaacatcaccatcaatcacgtacaaccacaagtacatcaagtaatttgcacaactaggactcat 22254885  T
Q  247 gccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22254886 gccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 22254934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 149 - 288
Target Start/End: Complemental strand, 25254993 - 25254853
Alignment:
Q  149 ttaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgc 248  Q
    |||||||| ||||||||| | ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||     
T  25254993 ttaatcatgacatgacacaacaatccatcaaatacaaacatcaccattaatcacttacaaccacaagtacatcaagtaatttcacaactaggactcatgt 25254894  T
Q  249 cacaacatgatatgatcctagacacaac-tctatatgcatg 288  Q
    |||  |||||||||||||||||||||||  |||||||||||    
T  25254893 cacctcatgatatgatcctagacacaacacctatatgcatg 25254853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 147 - 295
Target Start/End: Complemental strand, 23779604 - 23779454
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaattt-catagctaggactca 245  Q
    |||||||||| ||||| ||| | ||  || |||||||||||||||||| || |||| ||||||||||||| ||||||||||||| || | ||||||||||    
T  23779604 aattaatcattacatggcacaacaacccaacaaatacaaacatcaccactactcacttacaaccacaagttcatcaagtaatttgcacaactaggactca 23779505  T
Q  246 tgccacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    || |||  |||||||||||||||||||||||  ||||||||||||||||||    
T  23779504 tgtcacctcatgatatgatcctagacacaacaactatatgcatgcggtacc 23779454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 175 - 295
Target Start/End: Original strand, 32464398 - 32464519
Alignment:
Q  175 atcaaatacaaacatcaccattaatcacgtacaaccacaa-gtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacac 273  Q
    |||||||| || |||||| |||||| |   |||||||||| | ||||||| ||  |||| | |||||||||||| |||||||||||||||||||||||||    
T  32464398 atcaaatataatcatcacaattaattattcacaaccacaatgcacatcaaatacattcacaactaggactcatgtcacaacatgatatgatcctagacac 32464497  T
Q  274 aactctatatgcatgcggtacc 295  Q
    ||||||||||||||| ||||||    
T  32464498 aactctatatgcatgtggtacc 32464519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 25255158 - 25255034
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaatagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaatg 114  Q
    ||||||| ||||||| |||||| ||||||||| ||||||||||||| ||| |||||| ||||| || |||||||| | |||| |||||||| ||| || |    
T  25255158 aggaataacataatcaaatatcgtgtaatgaa-tcaaatagataaatttc-atacatacattatcaccacaatccaagtctcaccgacatatatttaacg 25255061  T
Q  115 aacacatcatcatcaatattcgtcatt 141  Q
    |||||||||||||||||| || |||||    
T  25255060 aacacatcatcatcaataatcatcatt 25255034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 22254625 - 22254746
Alignment:
Q  18 aatagcataatccaatatcatgtaatgaaatcaaatagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaatgaac 117  Q
    ||||||||||||||||||||||||  |||   ||||||||| | |||||||||| ||||| || | |||| | | |||| ||| |||| |||||||||||    
T  22254625 aatagcataatccaatatcatgtac-gaatcaaaatagatata-ttccatacatacattatcaccgcaattcaagtctcaccggcatatattcaatgaac 22254722  T
Q  118 acatcatcatcaatattcgtcatt 141  Q
    ||||||||||||||| || |||||    
T  22254723 acatcatcatcaataatcatcatt 22254746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 16294483 - 16294375
Alignment:
Q  188 atcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactc-tatatgca 286  Q
    ||||| || ||||||  ||||||||||||| ||||| || ||||| |  ||||||||||||||||| ||||||||  ||||||||| || | || |||||    
T  16294483 atcacaatcaatcactcacaaccacaagtatatcaattattttcacaattaggactcatgccacaatatgatatgcccctagacacgacacataaatgca 16294384  T
Q  287 tgcggtacc 295  Q
    |||||||||    
T  16294383 tgcggtacc 16294375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 149 - 292
Target Start/End: Complemental strand, 9819 - 9676
Alignment:
Q  149 ttaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgc 248  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||| | |||||||||||||    
T  9819 ttaatcataacataacacaacaatccatcaaatacaaacatcaccatcaatcacttccaaccacaagtacatcaagtaatttcacaactaggactcatgc 9720  T
Q  249 cacaacatgatatgatcctagacacaactctatatgcatgcggt 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  9719 cacaacatgatatgatcctagacacaactctatatgcatgcggt 9676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 147 - 295
Target Start/End: Original strand, 16432 - 16581
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcat 246  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| |    
T  16432 aattaatcataacatgacacaacaatccatcaaatacaaacatcaccattaatcacttacaaccacaagtacatcaagtaatttcacaactaggactcgt 16531  T
Q  247 gccacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    | |||  ||||||||||||||||||||||| |||||||||||||||||||    
T  16532 gtcacctcatgatatgatcctagacacaacatctatatgcatgcggtacc 16581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 16268 - 16393
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaatagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaatg 114  Q
    ||||||| ||||||||||||||||||||||||   ||||||||||| |  ||||||| ||||| || | |||||| | || | |||||||| |||||| |    
T  16268 aggaataacataatccaatatcatgtaatgaatcaaaatagataaa-tctcatacatacattatcaccgcaatccaattcccaccgacatatattcaacg 16366  T
Q  115 aacacatcatcatcaatattcgtcatt 141  Q
    ||| ||||||||| |||| || |||||    
T  16367 aacgcatcatcattaataatcatcatt 16393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 3e-48; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 147 - 295
Target Start/End: Original strand, 14283791 - 14283940
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcat 246  Q
    |||||||||||||||||||| | ||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||    
T  14283791 aattaatcataacatgacacaacaatccatcaagtacaaacatcaccattaatcacttacaaccacaagtacatcaagtaatttcacaactaggactcat 14283890  T
Q  247 gccacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    | |||  |||||||||||||||||||||||  ||||||||||||||||||    
T  14283891 gtcacctcatgatatgatcctagacacaacacctatatgcatgcggtacc 14283940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 149 - 295
Target Start/End: Complemental strand, 9304422 - 9304275
Alignment:
Q  149 ttaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgc 248  Q
    ||||||||||||||| || | ||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| | ||||||||||||     
T  9304422 ttaatcataacatgatacaacaatccatcaaatacaaacatcaccatcaatcacttacaaccacaagtacatcaagtaatttcacaactaggactcatgt 9304323  T
Q  249 cacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    |||  |||||||||||||||||||||||  ||||||||||||||||||    
T  9304322 cacctcatgatatgatcctagacacaacacctatatgcatgcggtacc 9304275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 147 - 295
Target Start/End: Complemental strand, 23887866 - 23887717
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcat 246  Q
    |||||||||||||||||||| | ||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| | |||||||||||    
T  23887866 aattaatcataacatgacacaacaatccatcaaatacaaacatcaccatcaatcacttacaaccacaagtacatcaagtaatttcacaactaggactcat 23887767  T
Q  247 gccacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    | |||  |||||||||||| ||||||||||  ||||||| ||||||||||    
T  23887766 gtcacctcatgatatgatcatagacacaacacctatatgtatgcggtacc 23887717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 147 - 291
Target Start/End: Original strand, 38166532 - 38166677
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcat 246  Q
    |||||||||||||||||||| | ||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| | |||||||||||    
T  38166532 aattaatcataacatgacacaacaatacatcaaatacaaacatcaccatcaatcacttacaaccacaagtacatcaagtaatttcacaactaggactcat 38166631  T
Q  247 gccacaacatgatatgatcctagacacaac-tctatatgcatgcgg 291  Q
    | |||  ||||||||||||||||||||| |  ||||||||||||||    
T  38166632 gtcacctcatgatatgatcctagacacagcacctatatgcatgcgg 38166677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 149 - 295
Target Start/End: Complemental strand, 11987843 - 11987696
Alignment:
Q  149 ttaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgc 248  Q
    |||||||| ||||||||| | ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||       
T  11987843 ttaatcatgacatgacacaacaatccatcaaatacaaacatcaccattaatcacttacaaccacaagtacatcaagtaatttcacaactaggactcaatt 11987744  T
Q  249 cacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    |||  |||||||||||||||||||||||  ||||||||||||||||||    
T  11987743 cacctcatgatatgatcctagacacaacacctatatgcatgcggtacc 11987696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 149 - 292
Target Start/End: Original strand, 17936729 - 17936874
Alignment:
Q  149 ttaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaa-tttcatagctaggactcatg 247  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||| | ||||||||||||    
T  17936729 ttaatcataacatgacacaacaatccatcaaatacaaacatcaccatcaatcacttacaaccacaagtacatcaagtaattttcacaactaggactcatg 17936828  T
Q  248 ccacaacatgatatgatcctagacacaac-tctatatgcatgcggt 292  Q
     |||  |||||||||||||||||||||||  |||||||||||||||    
T  17936829 tcacctcatgatatgatcctagacacaacacctatatgcatgcggt 17936874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 11480923 - 11480798
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaatagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaatg 114  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||| ||| | || |||||||| | |||| |||||||||||||||||    
T  11480923 aggaatagcataatccaacatcatgtaatgaaatcaaatagataaatttc-atacatacatcatcaccacaatccaagtctcaccgacataaattcaatg 11480825  T
Q  115 aacacatcatcatcaatattcgtcatt 141  Q
    ||||||||||||||||||||| |||||    
T  11480824 aacacatcatcatcaatattcatcatt 11480798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 147 - 295
Target Start/End: Complemental strand, 11480759 - 11480610
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcat 246  Q
    |||||||||||| ||||||| | ||| |||||| |  |||||||||||| |||||  ||||||||||||||||||||||||||||| | |||||||||||    
T  11480759 aattaatcataatatgacacaacaatccatcaagtgtaaacatcaccatcaatcatttacaaccacaagtacatcaagtaatttcacaactaggactcat 11480660  T
Q  247 gccacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    | |||   ||||||||||||||||||||||  ||||||||||||||||||    
T  11480659 gtcaccttatgatatgatcctagacacaacacctatatgcatgcggtacc 11480610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 147 - 295
Target Start/End: Complemental strand, 12903556 - 12903406
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaattt-catagctaggactca 245  Q
    |||||||||||||||| ||| | ||  || ||||| |||||||||| ||||||||| |||||||||||| |||||||||||||| || | ||||| ||||    
T  12903556 aattaatcataacatggcacaacaacccaacaaatgcaaacatcactattaatcacttacaaccacaagaacatcaagtaatttgcacaactaggtctca 12903457  T
Q  246 tgccacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    ||||||  |||||||||||||||||||||||  ||||||||||||||||||    
T  12903456 tgccacctcatgatatgatcctagacacaacacctatatgcatgcggtacc 12903406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 23888030 - 23887905
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaatagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaatg 114  Q
    ||||||||||||||||||||||||||||||||   ||||||||||| || ||||||| ||||| || |||||||| | | || |||||||| |||||| |    
T  23888030 aggaatagcataatccaatatcatgtaatgaatcaaaatagataaa-ttacatacatacattatcaccacaatccaagtttcaccgacatatattcaacg 23887932  T
Q  115 aacacatcatcatcaatattcgtcatt 141  Q
    |||||||||||||||||| || |||||    
T  23887931 aacacatcatcatcaataatcatcatt 23887905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 205 - 295
Target Start/End: Complemental strand, 51962847 - 51962757
Alignment:
Q  205 acaaccacaa-gtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    |||||||||| ||||||||| ||  |||| | |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  51962847 acaaccacaatgtacatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacac-accctatatgcatgcggtacc 51962757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 14283628 - 14283743
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaatagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaatg 114  Q
    ||||||| |||| |||||||||||||||||||   ||||||||||| |||||||||||||||| || |||||||| | |||| ||  |||| |||||| |    
T  14283628 aggaataacatagtccaatatcatgtaatgaatcaaaatagataaa-ttccatacatgcattatca-cacaatccaagtctcaccatcatatattcaacg 14283725  T
Q  115 aacacatcatcatcaata 132  Q
    ||||||||||||||||||    
T  14283726 aacacatcatcatcaata 14283743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 141
Target Start/End: Complemental strand, 11988008 - 11987884
Alignment:
Q  16 ggaatagcataatccaatatcatgtaatgaaatcaaatagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaatga 115  Q
    ||||||||||||||||||||| |||||||||   ||||||||||| || ||||||| ||||| ||   |||||| | |||| |||||||| |||||| ||    
T  11988008 ggaatagcataatccaatatcgtgtaatgaatcaaaatagataaa-tttcatacatacattatcactgcaatccaagtctcaccgacatatattcaacga 11987910  T
Q  116 acacatcatcatcaatattcgtcatt 141  Q
    ||||| ||||||||||| || |||||    
T  11987909 acacaacatcatcaataatcatcatt 11987884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 294
Target Start/End: Original strand, 18738360 - 18738419
Alignment:
Q  236 ctaggactcatgccacaa-catgatatgatcctagacacaactctatatgcatgcggtac 294  Q
    |||||||||||||||||| |||| ||||||||||||||| || |||||||||||||||||    
T  18738360 ctaggactcatgccacaatcatgttatgatcctagacacgacactatatgcatgcggtac 18738419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 11636956 - 11637024
Alignment:
Q  205 acaaccacaagtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacac 273  Q
    ||||||||||||| ||||| || ||||| |  ||||||||||||||||| ||||||||  |||||||||    
T  11636956 acaaccacaagtatatcaattattttcacaattaggactcatgccacaatatgatatgcccctagacac 11637024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 5227014 - 5227130
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaatagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaatg 114  Q
    |||||||||||| |||||||||||||||||||   |||||||| ||||| ||||||| |     ||  ||||||| | |||| |||||||| |||||| |    
T  5227014 aggaatagcatactccaatatcatgtaatgaataaaaatagat-aagtttcatacatactcattcactacaatccaagtctcaccgacatatattcaacg 5227112  T
Q  115 aacacatcatcatcaata 132  Q
    |||| ||||||| |||||    
T  5227113 aacatatcatcaccaata 5227130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 149 - 295
Target Start/End: Original strand, 29960 - 30107
Alignment:
Q  149 ttaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgc 248  Q
    |||||||| ||||||||| | ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||     
T  29960 ttaatcatgacatgacacaacaatccatcaaatacaaacatcaccattaatcacttacaaccacaagtacatcaagtaatttcacaactaggactcatgt 30059  T
Q  249 cacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    |||  |||||||||||||||||||||||  ||||||||||||||||||    
T  30060 cacctcatgatatgatcctagacacaacacctatatgcatgcggtacc 30107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 4e-47; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 147 - 294
Target Start/End: Complemental strand, 16301782 - 16301636
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcat 246  Q
    |||||| ||||||||| ||  | ||| ||||||| ||||||||||||||||||||| |||||||||||||| |||||||| ||||| | |||||||||||    
T  16301782 aattaaccataacatggcataacaatccatcaaacacaaacatcaccattaatcacttacaaccacaagtaaatcaagta-tttcacaactaggactcat 16301684  T
Q  247 gccacaacatgatatgatcctagacacaactctatatgcatgcggtac 294  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16301683 gccacaacatgatatgatcctagacacaactctatatgcatgcggtac 16301636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 147 - 295
Target Start/End: Complemental strand, 32278297 - 32278148
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcat 246  Q
    |||||||||||||||||||| | ||| ||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||| | |||||||||||    
T  32278297 aattaatcataacatgacacaacaatccatcaaatataaacatcaccatcaatcacttacaaccacaagtacatcaagtaatttcacaactaggactcat 32278198  T
Q  247 gccacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    | |||  ||  |||||||||||||||||||  ||||||||||||||||||    
T  32278197 gtcacctcaaaatatgatcctagacacaacacctatatgcatgcggtacc 32278148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 153 - 295
Target Start/End: Original strand, 29664706 - 29664849
Alignment:
Q  153 tcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgccaca 252  Q
    |||| |||||| || | ||| ||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||| | |||||||||||| |||     
T  29664706 tcatgacatgatacaataatccatcaaacacaaacatcaccattaatcacttacaaccacacgtacatcaagtaatttcacaactaggactcatgtcacc 29664805  T
Q  253 acatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
     |||||||||||||||||||| ||  ||||||||||||||||||    
T  29664806 tcatgatatgatcctagacacgacacctatatgcatgcggtacc 29664849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 183 - 295
Target Start/End: Original strand, 14150999 - 14151112
Alignment:
Q  183 caaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaac-tctat 281  Q
    |||| ||||| |||||||||  ||||||| ||| ||||||| || ||||| | |||| ||||||||||||||||||||||||||||||||| ||  ||||    
T  14150999 caaatatcacaattaatcactcacaaccataagcacatcaaatattttcacaactagcactcatgccacaacatgatatgatcctagacacgacacctat 14151098  T
Q  282 atgcatgcggtacc 295  Q
    ||||||||||||||    
T  14151099 atgcatgcggtacc 14151112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 32278461 - 32278336
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaatagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaatg 114  Q
    |||||||  |||||||||||||||||||||||   ||||||||||| |||||||||| ||||| || | |||||| | | || |||||||| |||||| |    
T  32278461 aggaataagataatccaatatcatgtaatgaatcaaaatagataaa-ttccatacatacattatcaccgcaatccaagtttcaccgacatatattcaacg 32278363  T
Q  115 aacacatcatcatcaatattcgtcatt 141  Q
    |||||||||||||||||| || |||||    
T  32278362 aacacatcatcatcaataatcatcatt 32278336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 187 - 290
Target Start/End: Original strand, 27739537 - 27739642
Alignment:
Q  187 catcaccattaatcacgtacaaccacaa-gtacatcaagtaatttcatagctaggactcatgccacaa-catgatatgatcctagacacaactctatatg 284  Q
    |||||| |||||||| | |||||||| | ||||||||| ||  |||| | |||||||||||||||||| |||||||||||||||||||| || ||||| |    
T  27739537 catcacaattaatcatgcacaaccaccacgtacatcaactacattcacaactaggactcatgccacaatcatgatatgatcctagacacgacactatagg 27739636  T
Q  285 catgcg 290  Q
    ||||||    
T  27739637 catgcg 27739642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 29664535 - 29664652
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatc--aaatagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaa 112  Q
    ||||||||||||||||||| |||||||||| ||||  ||||||||||| ||||| |||| ||| | || |||||||| | ||||  ||||||| ||||||    
T  29664535 aggaatagcataatccaatctcatgtaatg-aatcaaaaatagataaa-ttccacacatacatcatcaccacaatccaagtctcatcgacatatattcaa 29664632  T
Q  113 tgaacacatcatcatcaata 132  Q
     |||||||||||||| ||||    
T  29664633 cgaacacatcatcattaata 29664652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 295
Target Start/End: Complemental strand, 26523786 - 26523726
Alignment:
Q  236 ctaggactcatgccacaacatgatatgatcctagacacaactc-tatatgcatgcggtacc 295  Q
    |||||||||||||||||||||  |||| |||||||||| |||| || ||||||||||||||    
T  26523786 ctaggactcatgccacaacatactatgttcctagacacgactcttacatgcatgcggtacc 26523726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 295
Target Start/End: Original strand, 19670935 - 19671022
Alignment:
Q  209 ccacaagtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactc-tatatgcatgcggtacc 295  Q
    ||||||||| ||||| || ||||| |  ||||||||||||||||| ||||||||  ||||||||| || | || ||||||||||||||    
T  19670935 ccacaagtatatcaattattttcacaattaggactcatgccacaatatgatatgtccctagacacgacacataaatgcatgcggtacc 19671022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 295
Target Start/End: Complemental strand, 31469261 - 31469170
Alignment:
Q  205 acaaccacaagtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactc-tatatgcatgcggtacc 295  Q
    ||||||||||||| ||||| || || || |  ||||||||||||||||| ||||||||  ||||||||| || | || ||||||||||||||    
T  31469261 acaaccacaagtatatcaattatttccacaattaggactcatgccacaatatgatatgtccctagacacgacacataaatgcatgcggtacc 31469170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 147 - 295
Target Start/End: Complemental strand, 2349 - 2200
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcat 246  Q
    ||||||||||||||||| || | ||| ||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||| | |||||||||||    
T  2349 aattaatcataacatgatacaacaatccatcaaatataaacatcaccatcaatcacttacaaccacaagtacatcaagtaatttcacaactaggactcat 2250  T
Q  247 gccacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    | |||  |||||||||||||||||||||||  ||||||||||||||||||    
T  2249 gtcacctcatgatatgatcctagacacaacacctatatgcatgcggtacc 2200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 90; Significance: 2e-43; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 110185 - 110065
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaa-tagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaat 113  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||| | ||||||| |||||||||||||    
T  110185 aggaatagcataatccaatatcatgtaatgaaatcaaaatagataaa-ttccatacatgcattaacaccacaatccaagtctcgccaacataaattcaat 110087  T
Q  114 gaacacatcatcatcaatattc 135  Q
    ||||||||||||||||||||||    
T  110086 gaacacatcatcatcaatattc 110065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 147 - 295
Target Start/End: Complemental strand, 15125 - 14976
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcat 246  Q
    |||||||||||||||||||| | ||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |  ||||||||||    
T  15125 aattaatcataacatgacacaacaatccatcaaatacaaacatcaccatcaatcacttacaaccacaagtacatcaagtaatttcacaattaggactcat 15026  T
Q  247 gccacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    | |||   ||||||||||||||||||||||  ||| ||||||||||||||    
T  15025 gtcaccttatgatatgatcctagacacaacacctacatgcatgcggtacc 14976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 15207 - 15160
Alignment:
Q  98 ccgacataaattcaatgaacacatcatcatcaatattcgtcatttaca 145  Q
    |||||| |||||||| |||||||| ||||||||||||| |||||||||    
T  15207 ccgacacaaattcaacgaacacattatcatcaatattcatcatttaca 15160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 147 - 295
Target Start/End: Complemental strand, 67360 - 67211
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcat 246  Q
    |||||||||||||||||||| | ||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | || ||||||||    
T  67360 aattaatcataacatgacacaacaatccattaaatacaaacatcaccattaatcacttacaaccacaagtacatcaagtaatttcacaactgggactcat 67261  T
Q  247 gccacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    | |||   ||||||||||||||||||||||  ||||||||||||||||||    
T  67260 gtcaccttatgatatgatcctagacacaacacctatatgcatgcggtacc 67211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 67516 - 67395
Alignment:
Q  23 cataatccaatatcatgtaatgaaatcaaatagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaatgaacacatc 122  Q
    |||||| ||| ||||||||||||||||||||||||||| ||  |||||| ||||| || || ||||| | | || ||| || |||||||| ||||||||     
T  67516 cataatacaacatcatgtaatgaaatcaaatagataaa-tttaatacatacattatcaccataatccaagtttcaccggcacaaattcaacgaacacatt 67418  T
Q  123 atcatcaatattcgtcatttaca 145  Q
    ||||||||||||| |||||||||    
T  67417 atcatcaatattcatcatttaca 67395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 4e-41; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 147 - 295
Target Start/End: Original strand, 9793809 - 9793958
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcat 246  Q
    |||||||||||||||||||| | ||| |||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||| | |||||||||||    
T  9793809 aattaatcataacatgacacaacaatccatcaaatacaaacatcaccatcaatcacttacaaccacgagtacatcaagtaatttcacaactaggactcat 9793908  T
Q  247 gccacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    | |||   ||||||||||||||||||||||  ||| ||||||||||||||    
T  9793909 gtcaccttatgatatgatcctagacacaacacctacatgcatgcggtacc 9793958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 161 - 295
Target Start/End: Complemental strand, 32462198 - 32462063
Alignment:
Q  161 tgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgccacaacatgata 260  Q
    |||||| | ||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | |||||||||||| |||  |||||||    
T  32462198 tgacacaacaatccatcaaatacaaacatcatcattaatcacttacaaccacaagtacatcaagtaatttcacaactaggactcatgtcacctcatgata 32462099  T
Q  261 tgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    ||||||| ||||||||  |||||||||||| |||||    
T  32462098 tgatcctggacacaacacctatatgcatgcagtacc 32462063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 147 - 295
Target Start/End: Original strand, 22736983 - 22737131
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcat 246  Q
    ||||||||||||||||| || | ||| |||  ||| ||||||||||||| |||||   |||| |||||| | | |||||||||||| | |||||||||||    
T  22736983 aattaatcataacatgatacaacaatccattgaatgcaaacatcaccatgaatcattcacaatcacaagcataacaagtaatttcacaactaggactcat 22737082  T
Q  247 gccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||    
T  22737083 gccacatcatgatatgatcctagacaccactctatatgcatgcggtacc 22737131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 149 - 295
Target Start/End: Complemental strand, 23271853 - 23271706
Alignment:
Q  149 ttaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgc 248  Q
    |||||||| |||||| |  | ||| |||||||||||| ||||||||||||||||  |||| |||||||||||||| |||||||| | ||||||||||||     
T  23271853 ttaatcatgacatgatagaacaatccatcaaatacaagcatcaccattaatcactcacaatcacaagtacatcaattaatttcacaactaggactcatgt 23271754  T
Q  249 cacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    |||  |||||||||||||||||||||||  ||||||||||||||||||    
T  23271753 cacctcatgatatgatcctagacacaacacctatatgcatgcggtacc 23271706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 192 - 295
Target Start/End: Complemental strand, 14503219 - 14503115
Alignment:
Q  192 ccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaac-tctatatgcatgcg 290  Q
    |||| |||||| ||||||||||||||||||||||||||||| || ||||||||||| |||  |||||||||||||||||||||||  |||||||||||||    
T  14503219 ccatcaatcacttacaaccacaagtacatcaagtaatttcacagttaggactcatgtcacctcatgatatgatcctagacacaacacctatatgcatgcg 14503120  T
Q  291 gtacc 295  Q
    |||||    
T  14503119 gtacc 14503115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 147 - 295
Target Start/End: Original strand, 8043501 - 8043651
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaa-tttcatagctaggactca 245  Q
    |||||||| ||||||| ||| | | | || ||||||||||||||||||| |||||  |||||||||||| ||||||| ||| ||||| | ||||||||||    
T  8043501 aattaatcttaacatggcacaacagtccaacaaatacaaacatcaccatcaatcatttacaaccacaagcacatcaattaattttcacaactaggactca 8043600  T
Q  246 tgccacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    || |||  ||||||||||||||||||| |||  ||||||||||||||||||    
T  8043601 tgtcacctcatgatatgatcctagacataacacctatatgcatgcggtacc 8043651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 295
Target Start/End: Complemental strand, 55378459 - 55378399
Alignment:
Q  236 ctaggactcatgccacaa-catgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  55378459 ctaggactcatgccacaatcatgatatgatcctagacacaactctatatgcatgcggtacc 55378399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 23272020 - 23271894
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaatagata-aagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaat 113  Q
    |||||||||||||||||||||||||||||||| ||| |   ||| ||||||||||||| |||||  | |||||||| | |||| |||||||| ||||||     
T  23272020 aggaatagcataatccaatatcatgtaatgaa-tcataattatataagttccatacatacattattaccacaatccaagtctcaccgacatatattcaac 23271922  T
Q  114 gaacacatcatcatcaatattcgtcatt 141  Q
    ||||| ||||||||||||| || |||||    
T  23271921 gaacatatcatcatcaataatcatcatt 23271894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 8043340 - 8043462
Alignment:
Q  17 gaatagcataatccaatatcatgtaatgaaatcaaatagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaatgaa 116  Q
    |||||||||||||||||||||||||  |||   ||||| ||| | |||||||||| ||||| || | |||||| | |||| |||||||| ||||||||||    
T  8043340 gaatagcataatccaatatcatgtac-gaatcaaaatatatata-ttccatacatacattatcaccgcaatccaagtctcaccgacatatattcaatgaa 8043437  T
Q  117 cacatcatcatcaatattcgtcatt 141  Q
    |||||||||||||||| || |||||    
T  8043438 cacatcatcatcaataatcatcatt 8043462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 129
Target Start/End: Complemental strand, 32462380 - 32462266
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaa--tagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaa 112  Q
    |||||||||||||||||||||| | ||||||| |||||  |||||||| || ||||||| ||||| || |||||||| | ||||  ||||||| ||||||    
T  32462380 aggaatagcataatccaatatcgtataatgaa-tcaaaaatagataaa-ttacatacatacattatcaccacaatccaagtctcatcgacatatattcaa 32462283  T
Q  113 tgaacacatcatcatca 129  Q
     ||||||||||||||||    
T  32462282 cgaacacatcatcatca 32462266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 14503360 - 14503300
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaatagataaagttccatacatgcatt 76  Q
    ||||||||||||||||||||||||||||||||   |||||||| || |||||||||| ||||    
T  14503360 aggaatagcataatccaatatcatgtaatgaatcaaaatagat-aacttccatacatacatt 14503300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 9793727 - 9793774
Alignment:
Q  98 ccgacataaattcaatgaacacatcatcatcaatattcgtcatttaca 145  Q
    |||||| |||||||| |||||||| ||||||||||||| |||||||||    
T  9793727 ccgacacaaattcaacgaacacattatcatcaatattcatcatttaca 9793774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 295
Target Start/End: Complemental strand, 13595747 - 13595660
Alignment:
Q  209 ccacaagtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    ||||||||| ||||| || ||||| |  ||||||||||||||||||||| ||||  ||||||||| ||  ||| ||||||||||||||    
T  13595747 ccacaagtatatcaattattttcacaattaggactcatgccacaacatggtatgtccctagacacgacacctaaatgcatgcggtacc 13595660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 84; Significance: 6e-40; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 149 - 295
Target Start/End: Original strand, 44551 - 44698
Alignment:
Q  149 ttaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgc 248  Q
    |||||||| ||||||||| | ||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | |||| |||||||     
T  44551 ttaatcatgacatgacacaacaatccatcaaatacaaacatcaccattaatcacttacaatcacaagtacatcaagtaatttcacaactagaactcatgt 44650  T
Q  249 cacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    |||  |||||||||||||||||||| ||  ||||||||||||||||||    
T  44651 cacctcatgatatgatcctagacacgacacctatatgcatgcggtacc 44698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 149 - 295
Target Start/End: Original strand, 52747 - 52894
Alignment:
Q  149 ttaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgc 248  Q
    |||||||| ||||||||| | ||| ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| | ||||||||||||     
T  52747 ttaatcatgacatgacacaacaatccatcaaatacaaacatcaccattaatcacttacaatcacaagtacattaagtaatttcacaactaggactcatgt 52846  T
Q  249 cacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    |||  |||||||||||||||||||| ||  ||||||||||||||||||    
T  52847 cacctcatgatatgatcctagacacgacacctatatgcatgcggtacc 52894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 80; Significance: 2e-37; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 161 - 295
Target Start/End: Original strand, 17721 - 17855
Alignment:
Q  161 tgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgccacaacatgata 260  Q
    |||||| | ||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||| |||  |||||||    
T  17721 tgacacaacaatccatcaaatacaa-catcaccattaatcacttacaaccacaagtacatcaagtaatttcacaactaggactcatgtcacctcatgata 17819  T
Q  261 tgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    ||||||||||||||||  ||||||||||||||||||    
T  17820 tgatcctagacacaacacctatatgcatgcggtacc 17855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 205 - 295
Target Start/End: Complemental strand, 9717 - 9627
Alignment:
Q  205 acaaccacaa-gtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    |||||||||| ||||||||| ||  |||| | ||||||||||||||| |||||||||||||||||||||| || ||||||||||||||||||    
T  9717 acaaccacaatgtacatcaactacattcacaactaggactcatgccataacatgatatgatcctagacac-accctatatgcatgcggtacc 9627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 17542 - 17668
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaa--tagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaa 112  Q
    |||||||||||||||||||||| | ||||||| |||||  |||||||| | |||||||| ||||| || || ||||| | ||||  ||||||| ||||||    
T  17542 aggaatagcataatccaatatcgtataatgaa-tcaaaaatagataaaat-ccatacatacattatcaccataatccaagtctcatcgacatatattcaa 17639  T
Q  113 tgaacacatcatcatcaatattcgtcatt 141  Q
     ||||||||||||||||||| || |||||    
T  17640 cgaacacatcatcatcaataatcatcatt 17668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 166107 - 166000
Alignment:
Q  188 atcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcat 287  Q
    ||||||||||||||| |||||||| ||| |||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  166107 atcaccattaatcacttacaaccataagaacatcaagtaattttacaactaggactcatgccacaacatgatatgatcctagacacaaccctatatgcat 166008  T
Q  288 gcggtacc 295  Q
    ||||||||    
T  166007 gcggtacc 166000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 148 - 293
Target Start/End: Original strand, 3930 - 4075
Alignment:
Q  148 attaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatg 247  Q
    ||||||||||||||||||  | ||| ||| |||||| ||||||||||| ||||||||||||||||||||||||||||||| |||| | ||||||||||||    
T  3930 attaatcataacatgacataacaatccattaaatacgaacatcaccatcaatcacgtacaaccacaagtacatcaagtaa-ttcacaactaggactcatg 4028  T
Q  248 ccacaacatgatatgatcctagacacaac-tctatatgcatgcggta 293  Q
     |||  |||||||||||| ||||||||||  |||||| |||||||||    
T  4029 tcacctcatgatatgatcatagacacaacacctatatacatgcggta 4075  T

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Target: scaffold0173; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 141
Target Start/End: Original strand, 3765 - 3890
Alignment:
Q  15 aggaatagcataatccaatatcatgtaatgaaatcaaatagataaagttccatacatgcattaacatcacaatccgaatctcgccgacataaattcaatg 114  Q
    ||||||| ||||||||||||||||||||||||   ||||||||||| |||||||||| ||||| || | |||||| | | || |||||||| |||||| |    
T  3765 aggaataacataatccaatatcatgtaatgaatcaaaatagataaa-ttccatacatacattatcaccgcaatccaagtttcaccgacatatattcaacg 3863  T
Q  115 aacacatcatcatcaatattcgtcatt 141  Q
    |||||||||||||||||| || |||||    
T  3864 aacacatcatcatcaataatcatcatt 3890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1486 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 295
Target Start/End: Original strand, 1422 - 1569
Alignment:
Q  149 ttaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgc 248  Q
    |||||||| |||||||||   ||| ||||| ||||||||||||||||||||||| |||||| |||||||||| ||||||||||| | ||||||||||||     
T  1422 ttaatcatgacatgacacaccaatccatcatatacaaacatcaccattaatcacttacaactacaagtacattaagtaatttcacaactaggactcatgt 1521  T
Q  249 cacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    |||  |||||||||||| ||||||| ||  ||| ||||||||||||||    
T  1522 cacctcatgatatgatcatagacacgacacctaaatgcatgcggtacc 1569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 295
Target Start/End: Complemental strand, 58206 - 58059
Alignment:
Q  149 ttaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgc 248  Q
    |||||||| |||||||||   ||| ||||| |||||||||| |||||||||||| |||||| |||||||||| ||||||||||| | ||||||||||||     
T  58206 ttaatcatgacatgacacaccaatccatcatatacaaacattaccattaatcacttacaactacaagtacattaagtaatttcacaactaggactcatgt 58107  T
Q  249 cacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    |||  |||||||||||||||||||| ||  ||| ||||||||||||||    
T  58106 cacctcatgatatgatcctagacacgacacctacatgcatgcggtacc 58059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1666 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold1666
Description:

Target: scaffold1666; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 147 - 295
Target Start/End: Complemental strand, 1251 - 1101
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaa-tttcatagctaggactca 245  Q
    |||||||||||||||| ||| | ||| || ||||||| ||||||||||| |||||| ||||||||||||||||||| |||| ||||| | |||| |||||    
T  1251 aattaatcataacatggcacaacaatccaacaaatactaacatcaccatcaatcacttacaaccacaagtacatcacgtaattttcacaactagaactca 1152  T
Q  246 tgccacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    || |||  |||||||||||| ||||||||||  ||||||||||||||||||    
T  1151 tgtcacctcatgatatgatcatagacacaacacctatatgcatgcggtacc 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 147 - 295
Target Start/End: Complemental strand, 7772 - 7622
Alignment:
Q  147 aattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaattt-catagctaggactca 245  Q
    |||||||||||||||| ||  | ||  || ||||| |||||||||||||||||||| |||| |||||||||||||||||||||| || | ||||||||||    
T  7772 aattaatcataacatggcataacaacccaacaaatgcaaacatcaccattaatcacttacatccacaagtacatcaagtaatttgcacaactaggactca 7673  T
Q  246 tgccacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
    || |||  ||||||||||||||| |||||||  ||||||||||||||||||    
T  7672 tgtcacctcatgatatgatcctatacacaacacctatatgcatgcggtacc 7622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 139 - 295
Target Start/End: Complemental strand, 35507 - 35353
Alignment:
Q  139 atttacacaattaatcataacatgacaccaaaattcatcaaatacaaacatcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagcta 238  Q
    ||||||| ||||| ||||||||||| || | ||| |||||||||||||||||||||| |||||  ||||| |||||||||||||||||| |||  | ||     
T  35507 atttacataattactcataacatgatacaacaatccatcaaatacaaacatcaccatgaatcatttacaatcacaagtacatcaagtaaattcccaact- 35409  T
Q  239 ggactcatgccacaacatgatatgatcctagacacaac-tctatatgcatgcggtacc 295  Q
      ||||||| |||  |||||||||||||||||||||||  ||||||||||||||||||    
T  35408 --actcatgtcacctcatgatatgatcctagacacaacacctatatgcatgcggtacc 35353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 205 - 295
Target Start/End: Original strand, 12352 - 12442
Alignment:
Q  205 acaaccacaa-gtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    |||||||||| ||||||||| ||  |||| | |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  12352 acaaccacaatgtacatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacac-accctatatgcatgcggtacc 12442  T

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Target: scaffold0016 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 167843 - 167764
Alignment:
Q  215 gtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    ||||||||| ||  |||| | |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  167843 gtacatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacac-accctatatgcatgcggtacc 167764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 205 - 295
Target Start/End: Complemental strand, 171 - 81
Alignment:
Q  205 acaaccacaa-gtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    |||||||||| ||||||||| ||  |||| | |||||||||||||||||||||||||||||||||||||| ||  | |||||||||||||||    
T  171 acaaccacaatgtacatcaactacattcacaactaggactcatgccacaacatgatatgatcctagacac-accatgtatgcatgcggtacc 81  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 7640 - 7561
Alignment:
Q  215 gtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaactctatatgcatgcggtacc 295  Q
    ||||||||| ||  |||| | |||||||||||||||  ||||||||||||||||||||| || ||||||||||||||||||    
T  7640 gtacatcaactacattcacaactaggactcatgccattacatgatatgatcctagacac-accctatatgcatgcggtacc 7561  T

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Target: scaffold0561 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 4505 - 4397
Alignment:
Q  188 atcaccattaatcacgtacaaccacaagtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacacaac-tctatatgca 286  Q
    ||||| || ||||||  ||| ||||||||| ||||| || ||||| |  ||||||||||||||||||||| ||||  ||||||||| ||  ||| |||||    
T  4505 atcacaatcaatcactcacatccacaagtatatcaattattttcacaattaggactcatgccacaacatggtatgtccctagacaccacacctaaatgca 4406  T
Q  287 tgcggtacc 295  Q
    |||||||||    
T  4405 tgcggtacc 4397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 28553 - 28621
Alignment:
Q  205 acaaccacaagtacatcaagtaatttcatagctaggactcatgccacaacatgatatgatcctagacac 273  Q
    ||||||||||||| ||||| || ||||| |  ||||||||||||||||| ||||||||  |||||||||    
T  28553 acaaccacaagtatatcaactattttcacaattaggactcatgccacaatatgatatggccctagacac 28621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 294
Target Start/End: Original strand, 8744 - 8803
Alignment:
Q  236 ctaggactcatgccacaacatgatatgatcctagacacaact-ctatatgcatgcggtac 294  Q
    |||||||||||||||||||||| |||| |||||||||| ||| ||| ||||||| |||||    
T  8744 ctaggactcatgccacaacatgttatgttcctagacacgactcctacatgcatgtggtac 8803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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