View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19216_low_31 (Length: 265)
Name: NF19216_low_31
Description: NF19216
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19216_low_31 |
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Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 40031218 - 40030964
Alignment:
| Q |
1 |
aaagtcaaatgtgaataaactattttataaatgtggtttatcacttatcgtcattttgaaaaaggtttaaaaaagataaaactttacttt-atttaatta |
99 |
Q |
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| T |
40031218 |
aaagtcaaatgtgaataaactattttataaatgtggtttatcacttatcgtcagtttggaaaaggtttaaaaaagataaaactttacttttatttaatta |
40031119 |
T |
|
| Q |
100 |
aatgactatcatgagcgtttaacatagttctctataatctatatatcttcgcacataacattctttgatgtagttgaggacttcaaagtcaaagaatata |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||| |
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| T |
40031118 |
aatgactatcatgagcgtttaacatagttctctataatctatatatcttcacacataacattcttggatgtagttgaggacttcagagtcaaagaatata |
40031019 |
T |
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| Q |
200 |
gatatttctatgatttaatagtttgaagagaaaaaatatcaatttaagagctatt |
254 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40031018 |
tatatttctatgatttaatagtttgaagagaaaaaatatcaatttaagagctatt |
40030964 |
T |
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