View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19218_low_13 (Length: 363)
Name: NF19218_low_13
Description: NF19218
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19218_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 18 - 349
Target Start/End: Complemental strand, 1598538 - 1598207
Alignment:
| Q |
18 |
tgaccttcatgcaggactcaaaaattctttcattttgagggtaatttgttgggtctgtcttgtttacaatgcaagtttgattgcaagggtgggttagttt |
117 |
Q |
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| T |
1598538 |
tgaccttcatgcaggactcaaaaattctttcattttgagggtaatttgttgggtctgtcttgtttacaatgcaagtttgattgcaagggtgggttagttt |
1598439 |
T |
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| Q |
118 |
ctgaatgcctggtgtannnnnnnagtgtgaaactataaactgaactaaattcttctgattcaatttgtatatcaccaacagtttctttgtattacaattg |
217 |
Q |
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| T |
1598438 |
ctgaatgcctggtgtatttttttagtgtgaaactgtaaactgaactaaattcttctgattcaatttgtatatcaccaacagtttctttgtattacaattg |
1598339 |
T |
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| Q |
218 |
cagaagcttccaaagtcatcagcaggaaagcgaaaaaatggcaattctgttcgtccttacactccttccgagcaatatgcagacataaatcagcggtgtg |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1598338 |
cagaagcttccaaagtcatcagcaggaaagcgaaaaaatggcaattctgttcgtccttacactccttccgagcaatatgcagacataaatcagcggtgtg |
1598239 |
T |
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| Q |
318 |
gagcctcttctagtggtgtcacttctcttgat |
349 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
1598238 |
gagcctcttctagtggtgtcacttctcttgat |
1598207 |
T |
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