View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19219_low_18 (Length: 274)
Name: NF19219_low_18
Description: NF19219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19219_low_18 |
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Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 51036759 - 51037017
Alignment:
| Q |
1 |
ctatgcatcacacacattttagattgaacaccagttagctgtcgtacatgttgtctgacatatgttagtattctacactaattaacacgatactaaccaa |
100 |
Q |
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| T |
51036759 |
ctatgcatcacacacattttagattgaacaccagttagctgtcgtacatggtgtctgacatatgttagtattctacactaattaacacgatactaaccaa |
51036858 |
T |
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| Q |
101 |
tacacgtagttacatttagctacttttaatttctataattttatctttgtttatgtgtcgtatctggtgtttgtgccagtacttcatagattagaactaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51036859 |
tacacgtagttacatttagctacttttaatttctataattttatctttgtttatgtgtcgtatctggtgtttgtgccagtacttcatagattagaactaa |
51036958 |
T |
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| Q |
201 |
aagaaagttaagtgaagtnnnnnnngcaaatcaatacatacatcacgataggtgtttat |
259 |
Q |
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|||||||||||||||||| ||||||||||||||||||||| |||||||||||| |
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| T |
51036959 |
aagaaagttaagtgaagtaaaaaaagcaaatcaatacatacatcacaataggtgtttat |
51037017 |
T |
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