View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19219_low_22 (Length: 250)
Name: NF19219_low_22
Description: NF19219
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19219_low_22 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 13 - 250
Target Start/End: Original strand, 51036486 - 51036722
Alignment:
| Q |
13 |
aatataatttatatacaaaattcctatgtttggaattcattacaacaataaatgagttagtttgtaaatgaaaatctattttggaactaaaaatttactg |
112 |
Q |
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| T |
51036486 |
aatataatttatatacaaaattcctatgtttggaattcattacaacaataaatgagttagtttgtaaatcaaaatctattttggaactaaaaatttactg |
51036585 |
T |
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| Q |
113 |
agtaacttattttattaccattattttgaatatgccccactaaagtcccccaaaactaaatccaatggtttcaatcaaatcaatttctaaattttgttgc |
212 |
Q |
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| T |
51036586 |
agtaacttattttattaccattattttgaatatg-cccactaaagtcccccaaaactaaatccaatggtttcaatcaaatcaatttctaaattttgttgc |
51036684 |
T |
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| Q |
213 |
tgcgaatagattgaagtttgaacagaagctaaatcttt |
250 |
Q |
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| T |
51036685 |
tgcgaatagattgaagtttgaacagaagctaaatcttt |
51036722 |
T |
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