View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19220_low_4 (Length: 206)
Name: NF19220_low_4
Description: NF19220
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19220_low_4 |
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Alignment Details
Target: chr5 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 18 - 190
Target Start/End: Original strand, 41736424 - 41736596
Alignment:
| Q |
18 |
gtgttattattatgaaaaccttagaaagattgtaactgacggtatcacattataacaccaccataacgctctcttggttatttatttattacaatcagct |
117 |
Q |
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| T |
41736424 |
gtgttattattatgaaaaccttagaaagattgtaactgacggtatcacattataacaccaccataacgctctcttggttatttatttattacaatcagct |
41736523 |
T |
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| Q |
118 |
acttcatgcttcaactctaataaaaataaaaccgttacacaatctttctatgtatctcatattgaagtttcat |
190 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |
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| T |
41736524 |
acttcatgcttcaactctaataaaaataaaaccgttacacaatctttctatgtatctcttatttaagtttcat |
41736596 |
T |
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