View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19227_high_5 (Length: 292)
Name: NF19227_high_5
Description: NF19227
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19227_high_5 |
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Alignment Details
Target: chr6 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 14 - 275
Target Start/End: Original strand, 32320853 - 32321113
Alignment:
| Q |
14 |
atatctccagaactgctttgttcacttttaatatacctcaaaatcctattgcacaattttaacaaatttttagattgttaaattaacatgtctatatcaa |
113 |
Q |
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| T |
32320853 |
atatctccagaactgctttgttcacttttaatatacctcaaaatcctattgcacaattttaacaaatttttagattgttaaattaacatgtctatatcaa |
32320952 |
T |
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| Q |
114 |
tggattatcattagatggtaataaataagtgatttcaagatttaattaattacctttctttaaggtatgtagaatttgaaaagtagataggagaaccaac |
213 |
Q |
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| T |
32320953 |
tggattatcattagatggtaataaataagtga-ttcaagatttaattaattacctttctttaaggtatgtagaatttgaaaagtatataggagaaccaac |
32321051 |
T |
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| Q |
214 |
ttgtataattagaactcctggaattgttgaagcattagaatattgctcaacatctctatata |
275 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32321052 |
ttgtataattagaactcctggaattgttgaagcattagaatattgctcaacatctctatata |
32321113 |
T |
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