View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19228_high_9 (Length: 275)
Name: NF19228_high_9
Description: NF19228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19228_high_9 |
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Alignment Details
Target: chr6 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 18 - 264
Target Start/End: Complemental strand, 6012049 - 6011803
Alignment:
| Q |
18 |
tatcgttcattaacaaggcatgaccgttatgcacaggatttcttaactgaaaggcgaaaactgcatcagctttacgcctatcaaattcttcccgaagttg |
117 |
Q |
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| T |
6012049 |
tatcgttcattaacaaggcatgaccgttatgcacaggatttcttaactgaaaggcgaaaactgcatcagctttacgcctatcaaattcttcccgaagttg |
6011950 |
T |
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| Q |
118 |
cttgggagatagcctgtagttatcaagaccatcattgtatttgataggttttagcacttccaaatctcctccaataagccaatttccagctggagcaatg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6011949 |
cttgggagatagcctgtagttatcaagaccatcattgtatttgataggttttagcacttccaaatctcctccaataagccaatttccagctggagcaatg |
6011850 |
T |
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| Q |
218 |
acctcctcaacataaggcaatcctggagcagttgttccacaggttct |
264 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
6011849 |
acctcctcaacataaggcaatcctggagcagttgttccccaggttct |
6011803 |
T |
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