View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19228_low_9 (Length: 285)

Name: NF19228_low_9
Description: NF19228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19228_low_9
NF19228_low_9
[»] chr3 (32 HSPs)
chr3 (27-212)||(1706030-1706216)
chr3 (210-248)||(23700785-23700823)
chr3 (210-248)||(23719240-23719278)
chr3 (210-248)||(23737696-23737734)
chr3 (210-248)||(43701177-43701215)
chr3 (208-248)||(12050392-12050432)
chr3 (208-248)||(25149122-25149162)
chr3 (208-244)||(36099228-36099264)
chr3 (209-248)||(7181348-7181387)
chr3 (209-248)||(22103929-22103968)
chr3 (209-248)||(37728711-37728750)
chr3 (209-248)||(44543780-44543819)
chr3 (209-248)||(51284062-51284101)
chr3 (209-248)||(53271591-53271630)
chr3 (209-248)||(53361855-53361894)
chr3 (210-248)||(35868083-35868121)
chr3 (210-248)||(43868102-43868140)
chr3 (211-245)||(45049025-45049059)
chr3 (211-245)||(46049727-46049761)
chr3 (211-248)||(9499497-9499534)
chr3 (211-248)||(10220933-10220970)
chr3 (211-248)||(12683182-12683219)
chr3 (211-248)||(14428610-14428647)
chr3 (211-248)||(21756486-21756523)
chr3 (211-248)||(26593765-26593802)
chr3 (211-248)||(45252773-45252810)
chr3 (211-248)||(46049986-46050023)
chr3 (215-248)||(49127198-49127231)
chr3 (211-244)||(51283802-51283835)
chr3 (211-247)||(4024052-4024088)
chr3 (208-244)||(14428873-14428909)
chr3 (208-248)||(24087335-24087375)
[»] scaffold0025 (1 HSPs)
scaffold0025 (208-248)||(65637-65677)
[»] chr4 (29 HSPs)
chr4 (208-248)||(6807426-6807466)
chr4 (211-248)||(1859144-1859181)
chr4 (211-248)||(25708678-25708715)
chr4 (211-247)||(29427493-29427529)
chr4 (208-248)||(45742806-45742846)
chr4 (213-248)||(54676549-54676584)
chr4 (210-248)||(4035824-4035862)
chr4 (211-248)||(5375557-5375594)
chr4 (211-248)||(5743659-5743696)
chr4 (211-248)||(9328240-9328277)
chr4 (211-248)||(30771528-30771565)
chr4 (211-248)||(32032993-32033030)
chr4 (211-248)||(33413518-33413555)
chr4 (211-248)||(34273219-34273256)
chr4 (211-248)||(44294789-44294826)
chr4 (211-248)||(45921431-45921468)
chr4 (211-248)||(47806860-47806897)
chr4 (211-248)||(52977982-52978019)
chr4 (35-80)||(53359838-53359883)
chr4 (208-248)||(8343905-8343945)
chr4 (208-248)||(18882348-18882388)
chr4 (208-244)||(20747434-20747470)
chr4 (211-247)||(26626003-26626039)
chr4 (208-248)||(36391851-36391891)
chr4 (208-248)||(45097165-45097205)
chr4 (208-248)||(48030310-48030350)
chr4 (208-248)||(49793088-49793128)
chr4 (81-149)||(51267075-51267143)
chr4 (208-248)||(56432515-56432555)
[»] chr2 (20 HSPs)
chr2 (208-248)||(25624730-25624770)
chr2 (209-248)||(5664636-5664675)
chr2 (211-248)||(39833999-39834036)
chr2 (208-248)||(11201680-11201720)
chr2 (208-248)||(34883848-34883888)
chr2 (210-248)||(8990203-8990241)
chr2 (210-248)||(20252209-20252247)
chr2 (210-248)||(34062665-34062703)
chr2 (210-248)||(40607701-40607739)
chr2 (210-248)||(41450515-41450553)
chr2 (211-248)||(2438225-2438262)
chr2 (211-248)||(7491844-7491881)
chr2 (211-248)||(8716892-8716929)
chr2 (211-244)||(11201947-11201980)
chr2 (86-139)||(15577639-15577692)
chr2 (211-248)||(17408294-17408331)
chr2 (211-248)||(18970729-18970766)
chr2 (211-248)||(27560206-27560243)
chr2 (211-248)||(36131028-36131065)
chr2 (208-248)||(22897388-22897428)
[»] chr7 (20 HSPs)
chr7 (210-248)||(44547425-44547463)
chr7 (209-248)||(32814431-32814470)
chr7 (209-248)||(33858866-33858905)
chr7 (209-248)||(39871613-39871652)
chr7 (206-248)||(7449265-7449307)
chr7 (210-248)||(29286037-29286075)
chr7 (210-248)||(36698131-36698169)
chr7 (210-248)||(38858297-38858335)
chr7 (211-248)||(19920563-19920600)
chr7 (211-248)||(21295151-21295188)
chr7 (211-248)||(26255096-26255133)
chr7 (211-248)||(32872375-32872412)
chr7 (211-248)||(39197718-39197755)
chr7 (211-248)||(41026096-41026133)
chr7 (211-248)||(41252361-41252398)
chr7 (211-248)||(48521029-48521066)
chr7 (217-245)||(10475965-10475993)
chr7 (208-248)||(25950828-25950868)
chr7 (208-248)||(36646637-36646677)
chr7 (211-247)||(40300230-40300266)
[»] chr6 (14 HSPs)
chr6 (210-248)||(5457411-5457449)
chr6 (210-248)||(9388791-9388829)
chr6 (211-248)||(287414-287451)
chr6 (211-248)||(33487833-33487870)
chr6 (210-248)||(4844399-4844437)
chr6 (210-248)||(30248646-30248684)
chr6 (211-248)||(231105-231142)
chr6 (211-244)||(6418135-6418168)
chr6 (211-248)||(8743188-8743225)
chr6 (211-248)||(12106064-12106101)
chr6 (195-248)||(25197136-25197189)
chr6 (211-248)||(34301832-34301869)
chr6 (208-244)||(23397876-23397912)
chr6 (208-248)||(34915543-34915583)
[»] chr5 (17 HSPs)
chr5 (210-248)||(32147293-32147331)
chr5 (208-248)||(16127256-16127296)
chr5 (210-248)||(6673228-6673266)
chr5 (210-248)||(14913647-14913685)
chr5 (210-248)||(22527691-22527729)
chr5 (210-248)||(26894873-26894911)
chr5 (210-248)||(40004409-40004447)
chr5 (211-248)||(1265949-1265986)
chr5 (211-248)||(5527974-5528011)
chr5 (207-248)||(8949808-8949849)
chr5 (208-245)||(9020691-9020728)
chr5 (211-248)||(9828393-9828430)
chr5 (210-243)||(13661124-13661157)
chr5 (210-247)||(34662203-34662240)
chr5 (211-247)||(7951562-7951598)
chr5 (81-149)||(34255238-34255306)
chr5 (208-248)||(41641092-41641132)
[»] chr8 (26 HSPs)
chr8 (211-248)||(11798605-11798642)
chr8 (208-248)||(34490514-34490554)
chr8 (209-248)||(13153926-13153965)
chr8 (209-248)||(28572044-28572083)
chr8 (209-248)||(28579637-28579676)
chr8 (209-248)||(34568488-34568527)
chr8 (201-248)||(36177103-36177150)
chr8 (209-248)||(40784889-40784928)
chr8 (210-248)||(8251933-8251971)
chr8 (210-248)||(18754143-18754181)
chr8 (209-243)||(26990565-26990599)
chr8 (210-244)||(32475231-32475265)
chr8 (210-248)||(32675757-32675795)
chr8 (211-248)||(51095-51132)
chr8 (211-248)||(1774342-1774379)
chr8 (211-248)||(2944272-2944309)
chr8 (211-248)||(8951428-8951465)
chr8 (211-248)||(9035539-9035576)
chr8 (211-248)||(28192175-28192212)
chr8 (208-245)||(36408412-36408449)
chr8 (211-248)||(36786467-36786504)
chr8 (211-248)||(39029178-39029215)
chr8 (211-248)||(44251121-44251158)
chr8 (211-247)||(41014504-41014540)
chr8 (208-244)||(44250856-44250892)
chr8 (216-248)||(44580879-44580911)
[»] chr1 (23 HSPs)
chr1 (211-248)||(39750381-39750418)
chr1 (209-248)||(11741395-11741434)
chr1 (209-248)||(37951949-37951988)
chr1 (209-248)||(39497431-39497470)
chr1 (209-248)||(50007973-50008012)
chr1 (210-248)||(4102714-4102752)
chr1 (211-245)||(36695118-36695152)
chr1 (211-245)||(36711219-36711253)
chr1 (210-248)||(45039411-45039449)
chr1 (210-248)||(52431174-52431212)
chr1 (211-248)||(943637-943674)
chr1 (211-248)||(1039381-1039418)
chr1 (211-248)||(1046287-1046324)
chr1 (211-248)||(15811232-15811269)
chr1 (211-248)||(23541979-23542016)
chr1 (211-248)||(30290265-30290302)
chr1 (211-248)||(36694854-36694891)
chr1 (211-248)||(36710955-36710992)
chr1 (211-248)||(39363194-39363231)
chr1 (211-248)||(44649629-44649666)
chr1 (211-248)||(46075867-46075904)
chr1 (211-248)||(49907021-49907058)
chr1 (212-248)||(30289862-30289898)
[»] scaffold0008 (1 HSPs)
scaffold0008 (208-248)||(259122-259162)
[»] scaffold0122 (1 HSPs)
scaffold0122 (210-248)||(12064-12102)
[»] scaffold0029 (1 HSPs)
scaffold0029 (210-248)||(51682-51720)
[»] scaffold0012 (1 HSPs)
scaffold0012 (210-248)||(47639-47677)
[»] scaffold0604 (1 HSPs)
scaffold0604 (211-248)||(3782-3819)


Alignment Details
Target: chr3 (Bit Score: 123; Significance: 3e-63; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 27 - 212
Target Start/End: Original strand, 1706030 - 1706216
Alignment:
Q  27 ttttccttttttcagtttaattaaataattgatgtgtgtgaaatataatatagttatagtttatatacatcacttatttaatgagtttataaaatttaaa 126  Q
    ||||| |||||| ||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||   |||    
T  1706030 ttttcgtttttttagttttattaaataattgatgtatgtgaaatataatattgttatagtttatatacatcacttatttactgaatttataaaaaacaaa 1706129  T
Q  127 -gttgtttataaatattaccggagagtatggtggaagaaaatttatggtcactttagtattttagaatgttttataaaagagaaata 212  Q
     |||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||    
T  1706130 agttgtttataaatattactggagagtatggtggaagaaaagttatgatcactttagtattttagaatgttttataaaggagaaata 1706216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 23700823 - 23700785
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  23700823 atactccctccgtccctaattataagacctttttgagaa 23700785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 23719278 - 23719240
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  23719278 atactccctccgtccctaattataagacctttttgagaa 23719240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 23737734 - 23737696
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  23737734 atactccctccgtccctaattataagacctttttgagaa 23737696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 43701177 - 43701215
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  43701177 atactccctctgtccctaattataagacccttttgagaa 43701215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 12050432 - 12050392
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  12050432 aaatactccctccgtccctaattataagacccttttgagaa 12050392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 25149162 - 25149122
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  25149162 aaatactccctccgtccctaattataagacccttttgagaa 25149122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 36099264 - 36099228
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttg 244  Q
    ||||||||||||||||||||||||||||||| |||||    
T  36099264 aaatactccctctgtccctaattataagacccttttg 36099228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 7181348 - 7181387
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  7181348 aatactccctccgtccctaattataagacccttttgagaa 7181387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Complemental strand, 22103968 - 22103929
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  22103968 aatactccctccgtccctaattataagacccttttgagaa 22103929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 37728711 - 37728750
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  37728711 aatactccctccgtccctaattataagacccttttgagaa 37728750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 44543780 - 44543819
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  44543780 aatactccctccgtccctaattataagacccttttgagaa 44543819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Complemental strand, 51284101 - 51284062
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  51284101 aatactccctccgtccctaattataagacccttttgagaa 51284062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 53271591 - 53271630
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  53271591 aatactctctctgtccttaattataagacctttttgagaa 53271630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Complemental strand, 53361894 - 53361855
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  53361894 aatactccctccgtccctaattataagaccattttgagaa 53361855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 35868121 - 35868083
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  35868121 atactccctccgtccctaattataagacccttttgagaa 35868083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 43868102 - 43868140
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  43868102 atactccctccgtccctaattataagacccttttgagaa 43868140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 245
Target Start/End: Complemental strand, 45049059 - 45049025
Alignment:
Q  211 tactccctctgtccctaattataagacctttttga 245  Q
    |||||||||||||| ||||||||||||||||||||    
T  45049059 tactccctctgtccttaattataagacctttttga 45049025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 245
Target Start/End: Original strand, 46049727 - 46049761
Alignment:
Q  211 tactccctctgtccctaattataagacctttttga 245  Q
    ||||||||||||||||||||||| |||||||||||    
T  46049727 tactccctctgtccctaattataggacctttttga 46049761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 9499534 - 9499497
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  9499534 tactccctccgtccctaattataagacccttttgagaa 9499497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 10220933 - 10220970
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  10220933 tactccctccgtccctaattataagacccttttgagaa 10220970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 12683219 - 12683182
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  12683219 tactccctccgtccctaattataagaccattttgagaa 12683182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 14428610 - 14428647
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  14428610 tactccctccgtccctaattataagacccttttgagaa 14428647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 21756486 - 21756523
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  21756486 tactccctccgtccctaattataagacccttttgagaa 21756523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 26593802 - 26593765
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  26593802 tactccctccgtccctaattataagacccttttgagaa 26593765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 45252773 - 45252810
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  45252773 tactccctccgtccctaattataagacccttttgagaa 45252810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 46050023 - 46049986
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  46050023 tactccctccgtccctaattataagacccttttgagaa 46049986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 248
Target Start/End: Complemental strand, 49127231 - 49127198
Alignment:
Q  215 ccctctgtccctaattataagacctttttgagaa 248  Q
    ||||| ||||||||||||||||||||||||||||    
T  49127231 ccctccgtccctaattataagacctttttgagaa 49127198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 244
Target Start/End: Original strand, 51283802 - 51283835
Alignment:
Q  211 tactccctctgtccctaattataagacctttttg 244  Q
    |||||||||||||||||||||||||||| |||||    
T  51283802 tactccctctgtccctaattataagacccttttg 51283835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 4024052 - 4024088
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgaga 247  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  4024052 tactccctccgtccctaattataagacccttttgaga 4024088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 14428909 - 14428873
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttg 244  Q
    |||||||||||| |||||||||||||||||| |||||    
T  14428909 aaatactccctccgtccctaattataagacccttttg 14428873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 24087375 - 24087335
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||| |||| |||||||||||||||||| |||||||||    
T  24087375 aaatactacctccgtccctaattataagacccttttgagaa 24087335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 65677 - 65637
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  65677 aaatactccctccgtccctaattataagacctttttgagaa 65637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000006; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 6807426 - 6807466
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  6807426 aaatactccctctgtccctaattataagacccttttgagaa 6807466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 1859144 - 1859181
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  1859144 tactccctccgtccctaattataagacctttttgagaa 1859181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 25708715 - 25708678
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  25708715 tactccctccgtccctaattataagacctttttgagaa 25708678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 29427493 - 29427529
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgaga 247  Q
    |||||||||||||||||||||||||| ||||||||||    
T  29427493 tactccctctgtccctaattataagatctttttgaga 29427529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 45742846 - 45742806
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  45742846 aaatactccctccgtccctaattataagacccttttgagaa 45742806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 248
Target Start/End: Original strand, 54676549 - 54676584
Alignment:
Q  213 ctccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||| ||||||||||||||||||||||||||||    
T  54676549 ctccctccgtccctaattataagacctttttgagaa 54676584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 4035824 - 4035862
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  4035824 atactccctccgtccctaattataagacccttttgagaa 4035862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 5375594 - 5375557
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  5375594 tactccctccgtccctaattataagacccttttgagaa 5375557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 5743696 - 5743659
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  5743696 tactccctccgtccctaattataagacccttttgagaa 5743659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 9328277 - 9328240
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  9328277 tactccctccgtccctaattataagacccttttgagaa 9328240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 30771528 - 30771565
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  30771528 tactccctccgtccctaattataagacccttttgagaa 30771565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 32033030 - 32032993
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  32033030 tactccctccgtccctaattataagacccttttgagaa 32032993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 33413518 - 33413555
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  33413518 tactccctccgtccctaattataagacccttttgagaa 33413555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 34273256 - 34273219
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  34273256 tactccctccgtccctaattataagacccttttgagaa 34273219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 44294789 - 44294826
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  44294789 tactccctccgtccctaattataagacccttttgagaa 44294826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 45921431 - 45921468
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  45921431 tactacctttgtccctaattataagacctttttgagaa 45921468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 47806860 - 47806897
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  47806860 tactccctccgtccctaattataagacccttttgagaa 47806897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 52977982 - 52978019
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  52977982 tactccctccgtccctaattataagacccttttgagaa 52978019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 53359838 - 53359883
Alignment:
Q  35 ttttcagtttaattaaataattgatgtgtgtgaaatataatatagt 80  Q
    ||||||| || ||||||||||||||||  |||||||||||||||||    
T  53359838 ttttcagattcattaaataattgatgtaagtgaaatataatatagt 53359883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 8343905 - 8343945
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| || || |||||||||||||||||||||||||    
T  8343905 aaatactccttccgttcctaattataagacctttttgagaa 8343945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 18882348 - 18882388
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||  ||| ||||||||||||||||||||||||||||    
T  18882348 aaatactatctccgtccctaattataagacctttttgagaa 18882388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 20747470 - 20747434
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttg 244  Q
    |||||||||||| |||||||||||||||||| |||||    
T  20747470 aaatactccctccgtccctaattataagacccttttg 20747434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 247
Target Start/End: Complemental strand, 26626039 - 26626003
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgaga 247  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  26626039 tactccctccgtccctaattataagacccttttgaga 26626003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 36391851 - 36391891
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||||| |||| ||||||||||||| |||||||||    
T  36391851 aaatactccctccgtccttaattataagacccttttgagaa 36391891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 45097205 - 45097165
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| || |||||||||||||||||| |||||||||    
T  45097205 aaatactccatccgtccctaattataagacccttttgagaa 45097165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 48030310 - 48030350
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||||  ||||||||||||||||| |||||||||    
T  48030310 aaatactccctccatccctaattataagacccttttgagaa 48030350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 49793088 - 49793128
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||| |||| |||||||||||||||||| |||||||||    
T  49793088 aaatactacctccgtccctaattataagacccttttgagaa 49793128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 51267143 - 51267075
Alignment:
Q  81 tatagtttatatacatcacttatttaatgagtttataaaatttaaagttgtttataaatattaccggag 149  Q
    ||||||||| |||||||| ||||||||||| | || ||| || ||||||| |||||||| | |||||||    
T  51267143 tatagtttagatacatcagttatttaatgaatctaaaaagttgaaagttgcttataaatgtgaccggag 51267075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 56432515 - 56432555
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||| |||| |||||||||||||||||| |||||||||    
T  56432515 aaatactacctccgtccctaattataagacccttttgagaa 56432555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000006; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 25624730 - 25624770
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  25624730 aaatactccctccgtccctaattataagacctttttgagaa 25624770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 5664636 - 5664675
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  5664636 aatactccctccgtccctaattataagacctttttgagaa 5664675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 39834036 - 39833999
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  39834036 tactccctcagtccctaattataagacctttttgagaa 39833999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 11201680 - 11201720
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  11201680 aaatactccctccgtccctaattataagacccttttgagaa 11201720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 34883888 - 34883848
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  34883888 aaatactccctccgtccctaattataagacccttttgagaa 34883848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 8990203 - 8990241
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  8990203 atactccctccgtccctaattataagatctttttgagaa 8990241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 20252209 - 20252247
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  20252209 atactccctccgtccctaattataagacccttttgagaa 20252247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 34062703 - 34062665
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  34062703 atactccctccgtccctaattataagacccttttgagaa 34062665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 40607701 - 40607739
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  40607701 atactccctccgtccctaattataagacccttttgagaa 40607739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 41450515 - 41450553
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  41450515 atactccctccgtccctaattataagacccttttgagaa 41450553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 2438225 - 2438262
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  2438225 tactccctccgtccctaattataagacccttttgagaa 2438262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 7491844 - 7491881
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  7491844 tactccctccgtccctaattataagacccttttgagaa 7491881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 8716929 - 8716892
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  8716929 tactccctccgtccctaattataagacccttttgagaa 8716892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 244
Target Start/End: Complemental strand, 11201980 - 11201947
Alignment:
Q  211 tactccctctgtccctaattataagacctttttg 244  Q
    |||||||||||||||||||||||||||| |||||    
T  11201980 tactccctctgtccctaattataagacccttttg 11201947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 15577639 - 15577692
Alignment:
Q  86 tttatatacatcacttatttaatgagtttataaaatttaaagttgtttataaat 139  Q
    |||| |||||||| ||||||||||| |||| |||| | ||||||||||||||||    
T  15577639 tttagatacatcagttatttaatgaatttaaaaaagtaaaagttgtttataaat 15577692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 17408331 - 17408294
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  17408331 tactccctccgtccctaattataagacccttttgagaa 17408294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 18970766 - 18970729
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  18970766 tactacctctgtccctaattataagacccttttgagaa 18970729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 27560206 - 27560243
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  27560206 tactccctccgtccctaattataagacccttttgagaa 27560243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 36131065 - 36131028
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  36131065 tactccctccgtccctaattataagacccttttgagaa 36131028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 22897388 - 22897428
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||||| |||||||||||||||| | |||||||||    
T  22897388 aaatactccctccgtccctaattataagatccttttgagaa 22897428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 44547425 - 44547463
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  44547425 atactccctccgtccctaattataagacctttttgagaa 44547463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 32814431 - 32814470
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  32814431 aatactccctccgtccctaattataagacccttttgagaa 32814470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Complemental strand, 33858905 - 33858866
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  33858905 aatactccctccgtccctaattataagacccttttgagaa 33858866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Complemental strand, 39871652 - 39871613
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  39871652 aatactccctccgtccctaattataagacccttttgagaa 39871613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 7449265 - 7449307
Alignment:
Q  206 agaaatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||| ||||||||| |||||||||||||||||| |||||||||    
T  7449265 agaagtactccctccgtccctaattataagaccattttgagaa 7449307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 29286075 - 29286037
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  29286075 atactccctccgtccctaattataagacccttttgagaa 29286037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 36698169 - 36698131
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  36698169 atactccctccgtccctaattataagacccttttgagaa 36698131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 38858297 - 38858335
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  38858297 atactccctccgtccctaattataagacccttttgagaa 38858335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 19920563 - 19920600
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  19920563 tactccctccgtccctaattataagacccttttgagaa 19920600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 21295151 - 21295188
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  21295151 tactccctccgtccctaattataagacccttttgagaa 21295188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 26255096 - 26255133
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  26255096 tactccctccgtccctaattataagacccttttgagaa 26255133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 32872412 - 32872375
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  32872412 tactccctccgtccctaattataagacccttttgagaa 32872375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 39197718 - 39197755
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  39197718 tactccctccgtccctaattataagacccttttgagaa 39197755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 41026133 - 41026096
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  41026133 tactccctccgtccctaattataagacccttttgagaa 41026096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 41252398 - 41252361
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  41252398 tactccctccgtccctaattataagacccttttgagaa 41252361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 48521029 - 48521066
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  48521029 tactccctccgtccctaattataagacccttttgagaa 48521066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 245
Target Start/End: Complemental strand, 10475993 - 10475965
Alignment:
Q  217 ctctgtccctaattataagacctttttga 245  Q
    |||||||||||||||||||||||||||||    
T  10475993 ctctgtccctaattataagacctttttga 10475965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 25950828 - 25950868
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||| |||| |||| |||||||||||||||||||||||    
T  25950828 aaatactacctccgtccttaattataagacctttttgagaa 25950868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 36646677 - 36646637
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||||| ||||||||||| |||||| |||||||||    
T  36646677 aaatactccctccgtccctaattagaagacccttttgagaa 36646637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 40300230 - 40300266
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgaga 247  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  40300230 tactccctccgtccctaattataagacccttttgaga 40300266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 5457411 - 5457449
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  5457411 atactccctccgtccctaattataagacctttttgagaa 5457449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 9388829 - 9388791
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  9388829 atactccctccgtccctaattataagacctttttgagaa 9388791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 287451 - 287414
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  287451 tactccctccgtccctaattataagacctttttgagaa 287414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 33487833 - 33487870
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  33487833 tactccctccgtccctaattataagacctttttgagaa 33487870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 4844399 - 4844437
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  4844399 atactccctccgtccctaattataagacccttttgagaa 4844437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 30248646 - 30248684
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  30248646 atactccctccgtccctaattataagacccttttgagaa 30248684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 231142 - 231105
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  231142 tactccctccgtccctaattataagacccttttgagaa 231105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 244
Target Start/End: Complemental strand, 6418168 - 6418135
Alignment:
Q  211 tactccctctgtccctaattataagacctttttg 244  Q
    ||||||||| ||||||||||||||||||||||||    
T  6418168 tactccctccgtccctaattataagacctttttg 6418135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 8743188 - 8743225
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  8743188 tactccctccgtccctaattataagacccttttgagaa 8743225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 12106101 - 12106064
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  12106101 tactctctccgtccctaattataagacctttttgagaa 12106064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 25197136 - 25197189
Alignment:
Q  195 ttttataaaagagaaatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||| || | |||||||||||| |||||||||||||||| | |||||||||    
T  25197136 ttttatagaaaacaaatactccctccgtccctaattataagatccttttgagaa 25197189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 34301869 - 34301832
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  34301869 tactccctccgtccctaattataagacccttttgagaa 34301832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 244
Target Start/End: Original strand, 23397876 - 23397912
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttg 244  Q
    |||||||||||| |||||||||||||||||| |||||    
T  23397876 aaatactccctccgtccctaattataagaccattttg 23397912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 34915583 - 34915543
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||| |||| |||||||||||||||||| |||||||||    
T  34915583 aaatactacctccgtccctaattataagacccttttgagaa 34915543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 32147293 - 32147331
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  32147293 atactccctccgtccctaattataagacctttttgagaa 32147331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 16127256 - 16127296
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  16127256 aaatactccctccgtccctaattataagacccttttgagaa 16127296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 6673266 - 6673228
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  6673266 atactccctccgtccctaattataagacccttttgagaa 6673228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 14913647 - 14913685
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  14913647 atactccctccgtccctaattataagacccttttgagaa 14913685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 22527691 - 22527729
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  22527691 atactccctccgtccctaattataagacccttttgagaa 22527729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 26894911 - 26894873
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  26894911 atactccctccgtccctaattataagacccttttgagaa 26894873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 40004447 - 40004409
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  40004447 atactccctccgtccctaattataagacccttttgagaa 40004409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 1265949 - 1265986
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  1265949 tactccctccgtccctaattataagacccttttgagaa 1265986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 5527974 - 5528011
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  5527974 tactccctccgtccttaattataagacctttttgagaa 5528011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 8949808 - 8949849
Alignment:
Q  207 gaaatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||| |||| |||||||||||||||||| |||||||||    
T  8949808 gaaatactacctccgtccctaattataagacccttttgagaa 8949849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 245
Target Start/End: Original strand, 9020691 - 9020728
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttga 245  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  9020691 aaatactccctccgtccctaattataagacccttttga 9020728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 9828393 - 9828430
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  9828393 tactccctccgtccctaattataagacccttttgagaa 9828430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 13661157 - 13661124
Alignment:
Q  210 atactccctctgtccctaattataagaccttttt 243  Q
    |||||||||| |||||||||||||||||||||||    
T  13661157 atactccctccgtccctaattataagaccttttt 13661124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 247
Target Start/End: Original strand, 34662203 - 34662240
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgaga 247  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  34662203 atactccctccgtccctaattataagacccttttgaga 34662240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 7951562 - 7951598
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgaga 247  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  7951562 tactccctccgtccctaattataagacccttttgaga 7951598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 34255238 - 34255306
Alignment:
Q  81 tatagtttatatacatcacttatttaatgagtttataaaatttaaagttgtttataaatattaccggag 149  Q
    |||||| || |||||||||||||||||||| | || |||| | ||||||| |||||||| | |||||||    
T  34255238 tatagtctagatacatcacttatttaatgaatctaaaaaagtaaaagttgcttataaatgtgaccggag 34255306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 41641092 - 41641132
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||||| |||||||||||||||| | |||||||||    
T  41641092 aaatactccctccgtccctaattataagatcattttgagaa 41641132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 11798605 - 11798642
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||||||||||||||||||||| |||||||||    
T  11798605 tactccctctgtccctaattataagacccttttgagaa 11798642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 248
Target Start/End: Original strand, 34490514 - 34490554
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  34490514 aaatactccctccgtccctaattataagatctttttgagaa 34490554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 13153926 - 13153965
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  13153926 aatactccctccgtccctaattataagacccttttgagaa 13153965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 28572044 - 28572083
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  28572044 aatactccctccgtccctaattataagacccttttgagaa 28572083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 28579637 - 28579676
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  28579637 aatactccctccgtccctaattataagacccttttgagaa 28579676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 34568488 - 34568527
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  34568488 aatactccctccgtccctaattataagacccttttgagaa 34568527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 36177150 - 36177103
Alignment:
Q  201 aaaagagaaatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| ||||||||| |||||||||||||||||  |||||||||    
T  36177150 aaaagagaattactccctccgtccctaattataagactcttttgagaa 36177103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 40784889 - 40784928
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  40784889 aatactacctccgtccctaattataagacctttttgagaa 40784928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 8251971 - 8251933
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  8251971 atactccctccgtccctaattataagacccttttgagaa 8251933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 18754143 - 18754181
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  18754143 atactccctccgtccctaattataagacccttttgagaa 18754181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 26990565 - 26990599
Alignment:
Q  209 aatactccctctgtccctaattataagaccttttt 243  Q
    ||||||||||| |||||||||||||||||||||||    
T  26990565 aatactccctccgtccctaattataagaccttttt 26990599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 244
Target Start/End: Complemental strand, 32475265 - 32475231
Alignment:
Q  210 atactccctctgtccctaattataagacctttttg 244  Q
    ||||||||||||||||||||||||||||| |||||    
T  32475265 atactccctctgtccctaattataagacccttttg 32475231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 32675795 - 32675757
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  32675795 atactccctccgtccctaattataagacccttttgagaa 32675757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 51132 - 51095
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  51132 tactccctccgtccctaattataagacccttttgagaa 51095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 1774342 - 1774379
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  1774342 tactccctccgtccctaattataagacccttttgagaa 1774379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 2944309 - 2944272
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  2944309 tactccctccgtccctaattataagacccttttgagaa 2944272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 8951465 - 8951428
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  8951465 tactccctccgtccctaattataagacccttttgagaa 8951428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 9035576 - 9035539
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  9035576 tactccctccgtccctaattataagaccattttgagaa 9035539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 28192212 - 28192175
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  28192212 tactccctccgtccctaattataagacccttttgagaa 28192175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 245
Target Start/End: Original strand, 36408412 - 36408449
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttga 245  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  36408412 aaatactacctccgtccctaattataagacctttttga 36408449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 36786467 - 36786504
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  36786467 tacttcctccgtccctaattataagacctttttgagaa 36786504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 39029178 - 39029215
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  39029178 tactccctccgtccctaattataagacccttttgagaa 39029215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 44251158 - 44251121
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  44251158 tactccctccgtccctaattataagaccattttgagaa 44251121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 41014504 - 41014540
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgaga 247  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  41014504 tactccctccgtccctaattataagatctttttgaga 41014540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 244
Target Start/End: Original strand, 44250856 - 44250892
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttg 244  Q
    |||||||||||| |||||||||||||||||| |||||    
T  44250856 aaatactccctccgtccctaattataagacccttttg 44250892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 44580911 - 44580879
Alignment:
Q  216 cctctgtccctaattataagacctttttgagaa 248  Q
    |||| ||||||||||||||||||||||||||||    
T  44580911 cctccgtccctaattataagacctttttgagaa 44580879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 39750418 - 39750381
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||||||||||||||||||||| |||||||||    
T  39750418 tactccctctgtccctaattataagacccttttgagaa 39750381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 11741395 - 11741434
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  11741395 aatactccctccgtccctaattataagacccttttgagaa 11741434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Complemental strand, 37951988 - 37951949
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  37951988 aatactccctccgtccctaattataagacccttttgagaa 37951949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 39497431 - 39497470
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||||| |||||||||||||||||| |||||||||    
T  39497431 aatactccctccgtccctaattataagacccttttgagaa 39497470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 50007973 - 50008012
Alignment:
Q  209 aatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  50007973 aatactccctctgtccctaattataagactcttttgagaa 50008012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 4102752 - 4102714
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  4102752 atactccctccgtccctaattataagacccttttgagaa 4102714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 245
Target Start/End: Complemental strand, 36695152 - 36695118
Alignment:
Q  211 tactccctctgtccctaattataagacctttttga 245  Q
    |||||||||||||||||||||||||||| ||||||    
T  36695152 tactccctctgtccctaattataagacccttttga 36695118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 245
Target Start/End: Complemental strand, 36711253 - 36711219
Alignment:
Q  211 tactccctctgtccctaattataagacctttttga 245  Q
    |||||||||||||||||||||||||||| ||||||    
T  36711253 tactccctctgtccctaattataagacccttttga 36711219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 45039411 - 45039449
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  45039411 atactccctccgtccctaattataagacccttttgagaa 45039449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 52431212 - 52431174
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  52431212 atactccctccgtccctaattataagacccttttgagaa 52431174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 943674 - 943637
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  943674 tactccctccgtccctaattataagacccttttgagaa 943637  T

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Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 1039418 - 1039381
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  1039418 tactccctccgtccctaattataagacccttttgagaa 1039381  T

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Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 1046324 - 1046287
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  1046324 tactccctccgtccctaattataagacccttttgagaa 1046287  T

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Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 15811269 - 15811232
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  15811269 tactccctccgtccctaattataagacccttttgagaa 15811232  T

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Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 23541979 - 23542016
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  23541979 tactccctccgtccctaattataagacccttttgagaa 23542016  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 30290265 - 30290302
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  30290265 tactccctccgtccctaattataagacccttttgagaa 30290302  T

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Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 36694854 - 36694891
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  36694854 tactccctccgtccctaattataagacccttttgagaa 36694891  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 36710955 - 36710992
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  36710955 tactccctccgtccctaattataagacccttttgagaa 36710992  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 39363231 - 39363194
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  39363231 tactccctccgtccctaattataagacccttttgagaa 39363194  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 44649629 - 44649666
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  44649629 tactccctccgtccctaattataagacccttttgagaa 44649666  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 46075904 - 46075867
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  46075904 tactccctccgtccctaattataagacccttttgagaa 46075867  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 49907021 - 49907058
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  49907021 tactccctccgtccctaattataagacccttttgagaa 49907058  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 30289898 - 30289862
Alignment:
Q  212 actccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||| |||||||||||||||||| |||||||||    
T  30289898 actccctccgtccctaattataagacccttttgagaa 30289862  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 248
Target Start/End: Complemental strand, 259162 - 259122
Alignment:
Q  208 aaatactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  259162 aaatactccctccgtccctaattataagacccttttgagaa 259122  T

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Target: scaffold0122 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 12064 - 12102
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  12064 atactccctccgtccctaattataagacccttttgagaa 12102  T

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Target: scaffold0029 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 51720 - 51682
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  51720 atactccctccgtccctaattataagacccttttgagaa 51682  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 248
Target Start/End: Original strand, 47639 - 47677
Alignment:
Q  210 atactccctctgtccctaattataagacctttttgagaa 248  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  47639 atactccctccgtccctaattataagacccttttgagaa 47677  T

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Target: scaffold0604 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 3819 - 3782
Alignment:
Q  211 tactccctctgtccctaattataagacctttttgagaa 248  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  3819 tactccctccgtccctaattataagacccttttgagaa 3782  T

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