View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19230_low_11 (Length: 371)

Name: NF19230_low_11
Description: NF19230
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19230_low_11
NF19230_low_11
[»] chr6 (42 HSPs)
chr6 (61-227)||(10074371-10074528)
chr6 (53-232)||(2579872-2580042)
chr6 (63-220)||(3409259-3409407)
chr6 (61-227)||(10073624-10073779)
chr6 (61-220)||(29518503-29518653)
chr6 (61-220)||(29518920-29519070)
chr6 (61-220)||(32741179-32741329)
chr6 (61-230)||(2578451-2578610)
chr6 (159-228)||(6071124-6071193)
chr6 (93-220)||(26544049-26544167)
chr6 (62-231)||(16107667-16107827)
chr6 (157-230)||(16108053-16108126)
chr6 (32-220)||(35210204-35210384)
chr6 (78-230)||(1950210-1950353)
chr6 (157-220)||(2378126-2378189)
chr6 (92-227)||(10074030-10074156)
chr6 (157-231)||(593804-593878)
chr6 (97-231)||(2377743-2377868)
chr6 (61-230)||(16454897-16455057)
chr6 (79-227)||(12092508-12092647)
chr6 (161-220)||(14748437-14748496)
chr6 (161-224)||(33605971-33606034)
chr6 (160-230)||(2579203-2579273)
chr6 (158-220)||(3058226-3058288)
chr6 (78-216)||(3415462-3415591)
chr6 (161-231)||(5958702-5958772)
chr6 (157-215)||(32460675-32460733)
chr6 (157-230)||(5832121-5832194)
chr6 (88-156)||(10911621-10911689)
chr6 (61-156)||(1846803-1846898)
chr6 (61-156)||(2579500-2579595)
chr6 (157-232)||(2843542-2843617)
chr6 (161-228)||(8481919-8481985)
chr6 (157-232)||(9062444-9062519)
chr6 (161-228)||(33605646-33605713)
chr6 (61-230)||(16454565-16454725)
chr6 (157-220)||(1127360-1127423)
chr6 (157-220)||(3409660-3409723)
chr6 (61-156)||(3409715-3409810)
chr6 (193-228)||(7588355-7588390)
chr6 (95-156)||(2975607-2975668)
chr6 (157-230)||(6999891-6999964)
[»] chr4 (71 HSPs)
chr4 (62-230)||(50002416-50002575)
chr4 (61-230)||(36608667-36608827)
chr4 (157-227)||(2740693-2740763)
chr4 (61-227)||(36629230-36629387)
chr4 (97-230)||(3341118-3341242)
chr4 (87-228)||(41707497-41707628)
chr4 (157-230)||(49076541-49076614)
chr4 (157-230)||(52884877-52884950)
chr4 (61-233)||(25483323-25483486)
chr4 (78-230)||(36572009-36572152)
chr4 (93-232)||(34646687-34646817)
chr4 (89-227)||(3244485-3244614)
chr4 (93-230)||(16888854-16888983)
chr4 (157-227)||(52884688-52884758)
chr4 (157-230)||(10245910-10245983)
chr4 (61-230)||(22183270-22183430)
chr4 (61-156)||(43827495-43827589)
chr4 (61-222)||(49302902-49303056)
chr4 (61-227)||(32941129-32941286)
chr4 (157-227)||(54741271-54741341)
chr4 (157-226)||(44620654-44620723)
chr4 (32-154)||(54936253-54936376)
chr4 (103-227)||(2741064-2741179)
chr4 (79-231)||(4955341-4955484)
chr4 (157-225)||(39404013-39404081)
chr4 (157-228)||(3700357-3700428)
chr4 (157-220)||(49880160-49880223)
chr4 (169-231)||(1731752-1731814)
chr4 (157-231)||(4390194-4390268)
chr4 (161-227)||(20825829-20825895)
chr4 (61-227)||(39792866-39793023)
chr4 (78-220)||(50630778-50630911)
chr4 (157-232)||(54017795-54017872)
chr4 (157-233)||(16889629-16889706)
chr4 (157-230)||(22028054-22028127)
chr4 (157-230)||(39404388-39404461)
chr4 (157-226)||(44621420-44621489)
chr4 (27-220)||(55933096-55933280)
chr4 (159-231)||(11348423-11348495)
chr4 (160-228)||(12197370-12197438)
chr4 (159-227)||(28034222-28034290)
chr4 (61-211)||(44620362-44620503)
chr4 (61-229)||(51768066-51768225)
chr4 (61-156)||(23817687-23817782)
chr4 (93-156)||(45496860-45496923)
chr4 (50-231)||(49076826-49076997)
chr4 (61-223)||(54017601-54017754)
chr4 (157-230)||(44620286-44620359)
chr4 (157-230)||(45489424-45489497)
chr4 (32-225)||(3340802-3340988)
chr4 (172-228)||(45050593-45050649)
chr4 (157-217)||(50459724-50459784)
chr4 (93-152)||(22028407-22028466)
chr4 (61-156)||(44621057-44621152)
chr4 (157-227)||(54108908-54108976)
chr4 (157-230)||(44620934-44621008)
chr4 (79-132)||(15841392-15841445)
chr4 (157-214)||(20826223-20826280)
chr4 (103-156)||(31691207-31691260)
chr4 (167-220)||(50788086-50788139)
chr4 (157-210)||(54343094-54343147)
chr4 (159-215)||(760194-760250)
chr4 (168-231)||(19504694-19504757)
chr4 (157-220)||(41370357-41370420)
chr4 (200-230)||(23817782-23817812)
chr4 (78-156)||(54108968-54109045)
chr4 (161-222)||(23556963-23557024)
chr4 (63-156)||(34004593-34004685)
chr4 (159-227)||(10246340-10246408)
chr4 (179-231)||(11706636-11706688)
chr4 (157-231)||(54108526-54108599)
[»] chr5 (53 HSPs)
chr5 (33-225)||(35150002-35150185)
chr5 (62-230)||(26074602-26074761)
chr5 (61-220)||(26590918-26591068)
chr5 (61-215)||(38427553-38427697)
chr5 (157-233)||(12662747-12662823)
chr5 (61-231)||(15370088-15370249)
chr5 (157-230)||(299479-299552)
chr5 (62-227)||(26074155-26074311)
chr5 (61-230)||(40296323-40296483)
chr5 (157-227)||(1028612-1028682)
chr5 (157-231)||(36492312-36492386)
chr5 (159-227)||(36568664-36568732)
chr5 (157-230)||(11417072-11417143)
chr5 (157-227)||(13415855-13415925)
chr5 (61-227)||(41632775-41632932)
chr5 (157-230)||(6224186-6224259)
chr5 (158-230)||(26074878-26074950)
chr5 (61-220)||(624196-624346)
chr5 (157-228)||(3295439-3295509)
chr5 (61-220)||(6500451-6500600)
chr5 (61-220)||(6500823-6500972)
chr5 (157-231)||(26075257-26075331)
chr5 (157-230)||(25327925-25327998)
chr5 (159-228)||(31509615-31509684)
chr5 (157-230)||(42405691-42405764)
chr5 (61-220)||(32487394-32487543)
chr5 (178-230)||(35150737-35150789)
chr5 (178-230)||(35151028-35151080)
chr5 (157-220)||(623818-623881)
chr5 (157-224)||(3295110-3295176)
chr5 (157-231)||(300948-301022)
chr5 (157-218)||(18603215-18603276)
chr5 (157-230)||(34753120-34753193)
chr5 (157-230)||(35914839-35914912)
chr5 (157-220)||(9498749-9498812)
chr5 (157-220)||(27502131-27502194)
chr5 (157-227)||(24489299-24489369)
chr5 (82-156)||(36522266-36522340)
chr5 (157-218)||(26074320-26074381)
chr5 (157-214)||(41170640-41170697)
chr5 (78-126)||(623903-623951)
chr5 (172-228)||(9510630-9510686)
chr5 (88-156)||(13786036-13786104)
chr5 (53-113)||(35167838-35167898)
chr5 (167-227)||(36522001-36522061)
chr5 (157-220)||(5723886-5723949)
chr5 (93-156)||(9498694-9498757)
chr5 (157-220)||(29549350-29549413)
chr5 (161-227)||(39309677-39309743)
chr5 (61-126)||(1028525-1028590)
chr5 (157-218)||(7768852-7768913)
chr5 (103-156)||(41170689-41170742)
chr5 (188-220)||(5660298-5660330)
[»] chr3 (59 HSPs)
chr3 (78-232)||(12114587-12114732)
chr3 (61-230)||(42342396-42342556)
chr3 (61-230)||(15773182-15773344)
chr3 (61-230)||(25739433-25739593)
chr3 (93-230)||(37990679-37990807)
chr3 (61-230)||(43346799-43346959)
chr3 (61-220)||(22304569-22304719)
chr3 (61-228)||(45395661-45395819)
chr3 (32-231)||(52634665-52634856)
chr3 (61-231)||(15772843-15773004)
chr3 (93-231)||(29644942-29645071)
chr3 (157-227)||(35946515-35946585)
chr3 (63-230)||(32462910-32463069)
chr3 (159-230)||(31190007-31190078)
chr3 (159-230)||(53118071-53118142)
chr3 (157-228)||(54017911-54017982)
chr3 (61-227)||(9240142-9240299)
chr3 (157-227)||(21832438-21832508)
chr3 (61-227)||(33803260-33803417)
chr3 (169-231)||(53577353-53577415)
chr3 (157-230)||(29644676-29644749)
chr3 (61-232)||(32589692-32589853)
chr3 (161-232)||(39914240-39914311)
chr3 (157-230)||(32462653-32462727)
chr3 (157-227)||(33175759-33175829)
chr3 (168-230)||(43346640-43346702)
chr3 (157-231)||(49336782-49336856)
chr3 (157-230)||(37991072-37991145)
chr3 (61-230)||(42342098-42342258)
chr3 (88-231)||(1634349-1634484)
chr3 (161-224)||(7767413-7767476)
chr3 (61-156)||(39934963-39935058)
chr3 (157-220)||(50612547-50612610)
chr3 (157-227)||(8327897-8327967)
chr3 (159-225)||(39336326-39336392)
chr3 (157-230)||(25755384-25755457)
chr3 (95-220)||(39389070-39389186)
chr3 (157-230)||(54018293-54018366)
chr3 (168-220)||(22304246-22304298)
chr3 (159-215)||(36986045-36986101)
chr3 (159-215)||(37011484-37011540)
chr3 (61-230)||(3135462-3135629)
chr3 (185-228)||(12747875-12747918)
chr3 (62-230)||(41359774-41359929)
chr3 (169-220)||(51886561-51886612)
chr3 (157-230)||(45901703-45901777)
chr3 (157-230)||(11661525-11661598)
chr3 (64-153)||(22303670-22303759)
chr3 (157-213)||(3135168-3135224)
chr3 (79-227)||(47964544-47964683)
chr3 (159-227)||(47965012-47965080)
chr3 (160-223)||(3384364-3384427)
chr3 (53-156)||(22303955-22304058)
chr3 (175-230)||(22304061-22304116)
chr3 (157-220)||(37726504-37726567)
chr3 (61-156)||(37990985-37991080)
chr3 (161-228)||(44160643-44160710)
chr3 (159-227)||(46546422-46546490)
chr3 (163-227)||(54451277-54451341)
[»] chr7 (50 HSPs)
chr7 (61-230)||(1085624-1085784)
chr7 (62-230)||(7517570-7517729)
chr7 (93-230)||(30245067-30245195)
chr7 (157-231)||(43241484-43241558)
chr7 (157-230)||(23472-23545)
chr7 (157-230)||(7554015-7554088)
chr7 (61-230)||(30244260-30244420)
chr7 (62-231)||(40094783-40094943)
chr7 (61-217)||(37533372-37533519)
chr7 (63-230)||(45434626-45434784)
chr7 (157-230)||(16569186-16569259)
chr7 (157-230)||(16596403-16596476)
chr7 (157-230)||(30245484-30245557)
chr7 (157-230)||(30255329-30255402)
chr7 (157-230)||(45433231-45433304)
chr7 (55-230)||(9901635-9901799)
chr7 (32-213)||(11845198-11845372)
chr7 (61-220)||(37533019-37533168)
chr7 (157-230)||(118396-118469)
chr7 (157-230)||(22566757-22566830)
chr7 (93-230)||(22567079-22567206)
chr7 (157-230)||(24177425-24177498)
chr7 (161-230)||(30244691-30244760)
chr7 (157-229)||(36109012-36109084)
chr7 (158-230)||(36622950-36623022)
chr7 (61-229)||(36939741-36939900)
chr7 (93-220)||(29157565-29157683)
chr7 (157-227)||(8128536-8128606)
chr7 (157-231)||(24838797-24838871)
chr7 (157-227)||(28301638-28301708)
chr7 (157-231)||(36534879-36534953)
chr7 (157-231)||(45754705-45754778)
chr7 (161-230)||(41910693-41910762)
chr7 (157-225)||(40230386-40230454)
chr7 (92-231)||(34218073-34218203)
chr7 (63-156)||(19122786-19122879)
chr7 (157-230)||(30032557-30032630)
chr7 (93-156)||(30253547-30253610)
chr7 (61-152)||(37167840-37167931)
chr7 (78-230)||(47129085-47129228)
chr7 (94-156)||(6054615-6054677)
chr7 (94-220)||(14681510-14681627)
chr7 (160-230)||(41854625-41854694)
chr7 (170-227)||(40094502-40094559)
chr7 (166-230)||(36967333-36967397)
chr7 (93-155)||(1085288-1085350)
chr7 (161-231)||(20599303-20599373)
chr7 (159-223)||(10341829-10341893)
chr7 (187-223)||(37345558-37345594)
chr7 (61-113)||(41910594-41910646)
[»] scaffold0078 (2 HSPs)
scaffold0078 (157-228)||(5349-5420)
scaffold0078 (61-231)||(4971-5132)
[»] chr1 (59 HSPs)
chr1 (61-227)||(24600322-24600479)
chr1 (157-234)||(31767256-31767333)
chr1 (93-230)||(39066240-39066368)
chr1 (92-228)||(17294569-17294696)
chr1 (157-228)||(66567-66638)
chr1 (157-231)||(41184520-41184594)
chr1 (78-227)||(22077520-22077660)
chr1 (32-230)||(34364497-34364688)
chr1 (157-230)||(37850695-37850768)
chr1 (157-230)||(41142362-41142435)
chr1 (78-230)||(26661547-26661690)
chr1 (159-228)||(5320062-5320131)
chr1 (61-230)||(34364915-34365075)
chr1 (84-220)||(32594747-32594874)
chr1 (157-232)||(21378136-21378211)
chr1 (157-224)||(45084378-45084445)
chr1 (61-220)||(48588496-48588646)
chr1 (62-228)||(41157367-41157524)
chr1 (159-228)||(22793270-22793339)
chr1 (62-231)||(41156980-41157140)
chr1 (157-233)||(29798186-29798262)
chr1 (61-229)||(40082398-40082556)
chr1 (31-220)||(44290434-44290616)
chr1 (61-220)||(44290832-44290983)
chr1 (157-220)||(3537242-3537305)
chr1 (159-230)||(34649428-34649499)
chr1 (157-228)||(38804450-38804521)
chr1 (61-230)||(11977270-11977430)
chr1 (159-227)||(1188685-1188753)
chr1 (159-227)||(4878796-4878864)
chr1 (61-228)||(3875339-3875497)
chr1 (61-212)||(14318875-14319017)
chr1 (157-227)||(44685449-44685520)
chr1 (145-227)||(50469166-50469246)
chr1 (157-219)||(3550721-3550783)
chr1 (161-227)||(24132084-24132150)
chr1 (173-235)||(35154150-35154212)
chr1 (157-230)||(37556101-37556175)
chr1 (51-215)||(3537597-3537752)
chr1 (157-228)||(5575098-5575167)
chr1 (157-225)||(22077923-22077991)
chr1 (157-217)||(50052118-50052178)
chr1 (61-156)||(22077118-22077213)
chr1 (159-230)||(26661995-26662066)
chr1 (93-220)||(41759483-41759601)
chr1 (165-227)||(19283558-19283620)
chr1 (185-227)||(22077245-22077287)
chr1 (171-232)||(45839615-45839675)
chr1 (157-227)||(66182-66254)
chr1 (157-228)||(9955899-9955971)
chr1 (157-229)||(37555721-37555793)
chr1 (93-220)||(45494014-45494137)
chr1 (93-156)||(44043812-44043875)
chr1 (159-225)||(1187461-1187527)
chr1 (157-227)||(30630733-30630803)
chr1 (52-150)||(32168697-32168795)
chr1 (166-220)||(47379889-47379943)
chr1 (79-131)||(9955989-9956041)
chr1 (52-112)||(37850599-37850659)
[»] chr8 (66 HSPs)
chr8 (32-230)||(9309345-9309535)
chr8 (157-232)||(3038385-3038460)
chr8 (61-220)||(30441081-30441235)
chr8 (63-225)||(45122067-45122220)
chr8 (32-153)||(6731953-6732074)
chr8 (159-227)||(41972151-41972219)
chr8 (61-220)||(3669687-3669837)
chr8 (157-227)||(9608738-9608808)
chr8 (157-230)||(8918859-8918932)
chr8 (157-222)||(45122005-45122070)
chr8 (52-231)||(25561814-25561985)
chr8 (61-230)||(34834866-34835026)
chr8 (159-227)||(4154763-4154831)
chr8 (31-150)||(5915928-5916048)
chr8 (78-230)||(33113392-33113535)
chr8 (61-220)||(1013879-1014029)
chr8 (32-150)||(6651555-6651674)
chr8 (35-230)||(6876842-6877031)
chr8 (61-156)||(9483195-9483290)
chr8 (98-232)||(43274824-43274949)
chr8 (161-230)||(147441-147510)
chr8 (61-230)||(37544498-37544658)
chr8 (160-232)||(30359259-30359331)
chr8 (161-225)||(40518577-40518641)
chr8 (61-220)||(3670060-3670210)
chr8 (61-228)||(5420643-5420801)
chr8 (157-216)||(18380112-18380171)
chr8 (53-156)||(45122679-45122782)
chr8 (157-230)||(9482699-9482770)
chr8 (157-227)||(33831971-33832041)
chr8 (157-228)||(40518061-40518134)
chr8 (61-230)||(45122996-45123156)
chr8 (169-230)||(147819-147880)
chr8 (159-228)||(4154377-4154446)
chr8 (157-222)||(18372351-18372416)
chr8 (157-222)||(18372794-18372859)
chr8 (157-230)||(30359599-30359672)
chr8 (93-230)||(34835199-34835327)
chr8 (157-225)||(1514010-1514078)
chr8 (161-225)||(5274770-5274834)
chr8 (157-213)||(41416266-41416322)
chr8 (79-210)||(18372020-18372142)
chr8 (171-220)||(6731904-6731953)
chr8 (157-230)||(8794101-8794174)
chr8 (159-228)||(9620385-9620454)
chr8 (157-210)||(25561739-25561792)
chr8 (157-230)||(45121751-45121823)
chr8 (159-227)||(9620773-9620841)
chr8 (163-227)||(20995502-20995566)
chr8 (157-220)||(1014340-1014403)
chr8 (159-218)||(30486319-30486378)
chr8 (93-156)||(34835530-34835593)
chr8 (93-156)||(34835796-34835859)
chr8 (61-132)||(41129067-41129138)
chr8 (157-231)||(70369-70442)
chr8 (157-220)||(20870668-20870733)
chr8 (95-144)||(5274842-5274891)
chr8 (157-227)||(9308970-9309042)
chr8 (157-218)||(18372698-18372758)
chr8 (161-230)||(18373030-18373098)
chr8 (157-218)||(40579601-40579662)
chr8 (61-126)||(45121664-45121729)
chr8 (201-229)||(5915863-5915891)
chr8 (187-227)||(18645712-18645752)
chr8 (169-229)||(32640634-32640694)
chr8 (53-113)||(40579269-40579329)
[»] chr2 (61 HSPs)
chr2 (89-227)||(33561487-33561616)
chr2 (61-230)||(6421375-6421535)
chr2 (61-230)||(15880253-15880413)
chr2 (61-227)||(962591-962748)
chr2 (92-230)||(28254276-28254405)
chr2 (61-231)||(36005888-36006048)
chr2 (157-230)||(38796313-38796386)
chr2 (48-223)||(7598225-7598391)
chr2 (61-220)||(37105924-37106074)
chr2 (157-232)||(38796715-38796790)
chr2 (157-227)||(28531409-28531479)
chr2 (157-230)||(31899521-31899594)
chr2 (61-220)||(5542633-5542783)
chr2 (93-220)||(36178645-36178763)
chr2 (163-230)||(36785664-36785731)
chr2 (61-230)||(15511503-15511661)
chr2 (161-230)||(16542439-16542508)
chr2 (61-220)||(14745675-14745825)
chr2 (171-230)||(31468855-31468914)
chr2 (61-220)||(37106188-37106338)
chr2 (157-223)||(7598606-7598672)
chr2 (159-225)||(35580820-35580886)
chr2 (157-227)||(40679724-40679794)
chr2 (61-227)||(42514642-42514799)
chr2 (157-230)||(6712966-6713039)
chr2 (157-230)||(40733873-40733946)
chr2 (31-156)||(3673123-3673250)
chr2 (157-229)||(12529123-12529195)
chr2 (162-230)||(29676893-29676961)
chr2 (157-220)||(5543093-5543156)
chr2 (157-220)||(41283570-41283633)
chr2 (157-223)||(1769889-1769955)
chr2 (157-227)||(37632692-37632762)
chr2 (79-228)||(29873563-29873703)
chr2 (157-230)||(40733507-40733580)
chr2 (30-156)||(6422165-6422293)
chr2 (159-227)||(12910221-12910289)
chr2 (157-225)||(37894787-37894855)
chr2 (157-209)||(40163468-40163520)
chr2 (188-231)||(3672708-3672751)
chr2 (169-227)||(16590881-16590940)
chr2 (157-220)||(36178364-36178427)
chr2 (159-225)||(3594275-3594341)
chr2 (172-230)||(6421294-6421352)
chr2 (79-228)||(30313170-30313309)
chr2 (157-198)||(28254207-28254248)
chr2 (194-230)||(3673075-3673111)
chr2 (159-227)||(33953868-33953936)
chr2 (158-227)||(42515005-42515078)
chr2 (169-220)||(14745401-14745452)
chr2 (161-224)||(29874122-29874185)
chr2 (157-228)||(37895156-37895227)
chr2 (93-156)||(41283515-41283578)
chr2 (157-227)||(5367448-5367518)
chr2 (61-227)||(23346228-23346386)
chr2 (157-236)||(33731630-33731711)
chr2 (193-227)||(33954392-33954426)
chr2 (159-228)||(30323456-30323525)
chr2 (61-149)||(6421793-6421881)
chr2 (61-153)||(16590941-16591033)
chr2 (203-231)||(43779810-43779838)
[»] scaffold0734 (2 HSPs)
scaffold0734 (157-231)||(5385-5459)
scaffold0734 (157-230)||(5767-5840)
[»] scaffold0702 (3 HSPs)
scaffold0702 (157-220)||(237-300)
scaffold0702 (157-231)||(609-683)
scaffold0702 (97-156)||(558-617)
[»] scaffold0391 (3 HSPs)
scaffold0391 (160-230)||(1204-1274)
scaffold0391 (169-230)||(3092-3153)
scaffold0391 (92-156)||(1730-1794)
[»] scaffold0171 (1 HSPs)
scaffold0171 (157-230)||(17551-17624)
[»] scaffold0504 (1 HSPs)
scaffold0504 (157-230)||(10206-10279)
[»] scaffold0113 (1 HSPs)
scaffold0113 (159-228)||(39830-39899)
[»] scaffold0027 (1 HSPs)
scaffold0027 (157-232)||(47348-47423)


Alignment Details
Target: chr6 (Bit Score: 71; Significance: 4e-32; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 61 - 227
Target Start/End: Original strand, 10074371 - 10074528
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||| ||||||||||||||||| ||||||||||| ||| |||||||| ||||||  ||||||||||||         ||||    
T  10074371 tccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctc---------ttac 10074461  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||| |||||||||||||||| |||||| |||||||| || | ||||||||||||||||||||||    
T  10074462 ttataaggtgttcaacctttacttttctatccgatgtgggacctctaactcacacttgcacacaaca 10074528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 53 - 232
Target Start/End: Original strand, 2579872 - 2580042
Alignment:
Q  53 ggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttact 152  Q
    |||||| ||||||||||||  ||| |||||||||| ||  ||||||||| |||| |||||| ||| |||||||| |  ||   |||||||||||||||||    
T  2579872 ggggaccttccacatcgaggctagaacaaccgcacaagcaagagagacaccacattcttacccaaaaccttaaggctgtgggtttatgggtcctcttact 2579971  T
Q  153 tatattacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaaa 232  Q
    |||| |         |||||||||||||||| || ||| |||||||| ||||||||||||||||||||||||||||||||    
T  2579972 tataat---------gtgttcaacctttactcttttatccgatgtgggacatataactcacacttgcacacaacaacaaa 2580042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 63 - 220
Target Start/End: Complemental strand, 3409407 - 3409259
Alignment:
Q  63 cacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattactt 162  Q
    |||||||||  ||| |||||||||| ||  ||||||||| ||||||||||| ||| |||||||| ||||||  |||||||||||||||||         |    
T  3409407 cacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttact---------t 3409317  T
Q  163 ataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||| |||||||||||||||| || |||  ||||||| ||||||||||||||||||||    
T  3409316 ataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttgca 3409259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 227
Target Start/End: Original strand, 10073624 - 10073779
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    ||||||||||   ||| |||||| ||||||||||||||||| ||||||||||| ||| | |||||| ||||||  |||||| |||||         ||||    
T  10073624 tccacatcgatgctagaacaaccacactagtgagagagacaccacactcttacccaaaatcttaagccaatgagtttatggatcctc---------ttac 10073714  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||| |||||||||||||||| |||  | |||||||| |||||||||| ||||||||||||||||    
T  10073715 ttataaggtgttcaacctttacttttc--tccgatgtgggacatataactaacacttgcacacaaca 10073779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 220
Target Start/End: Complemental strand, 29518653 - 29518503
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||||||| ||  ||||||||| ||||||||||| ||| ||||||||  ||||   |||||||||||||||||||||        
T  29518653 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttata---- 29518558  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
         | |||||||||||||||| || ||| |||||||| ||||||||||||||||||||    
T  29518557 -----aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 29518503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 220
Target Start/End: Complemental strand, 29519070 - 29518920
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||||||| ||  ||||||||| ||||||||||| ||| ||||||||  ||||   |||||||||||||||||||||        
T  29519070 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttata---- 29518975  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
         | |||||||||||||||| || ||| |||||||| ||||||||||||||||||||    
T  29518974 -----aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 29518920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 220
Target Start/End: Complemental strand, 32741329 - 32741179
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||||||| ||  ||||||||| ||||||||||| ||| ||||||||  ||||   |||||||||||||||||||||        
T  32741329 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttata---- 32741234  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
         | |||||||||||||||| || ||| |||||||| ||||||||||||||||||||    
T  32741233 -----aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 32741179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 2578451 - 2578610
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||||||| ||  | ||||||| ||||||||||| ||| |||||||| | |||   |||||||||||||||||||||        
T  2578451 tccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttata---- 2578546  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
         |||||||||||||||||| || ||| || ||||| |||||||||||||||||| |||||||||||    
T  2578547 -----aagtgttcaacctttactcttttatccg-tgtgggacatataactcacacttgtacacaacaaca 2578610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 6071193 - 6071124
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    ||||||||||||||||||||  ||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  6071193 acttataaagtgttcaacctccacttttctattcaatgtgggacatataactcacacttgcacacaacaa 6071124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 220
Target Start/End: Complemental strand, 26544167 - 26544049
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattc 192  Q
    ||||||||||||||||||||||||| |||||||| |  ||   |||||||||||||||||||||         | |||||||||||||||| || ||| |    
T  26544167 agagagacatcacactcttactcaaaaccttaaggcggtgggtttatgggtcctcttacttata---------acgtgttcaacctttactattttatcc 26544077  T
Q  193 gatgtggaacatataactcacacttgca 220  Q
    ||||||| ||||||||||||||||||||    
T  26544076 gatgtgggacatataactcacacttgca 26544049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 231
Target Start/End: Complemental strand, 16107827 - 16107667
Alignment:
Q  62 ccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattact 161  Q
    ||||||||||  |||  ||||||||| ||  ||||||||| ||||||||||| ||| |||||||| |||||   ||||| |||||||||||||||         
T  16107827 ccacatcgaggctagagcaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttata----- 16107733  T
Q  162 tataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
        | ||||| |||||||||| || ||| |||||||  |||||||||||||||||| ||||||||||||    
T  16107732 ----aggtgtttaacctttacttttttatccgatgtgacacatataactcacacttgtacacaacaacaa 16107667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 16108126 - 16108053
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| ||||||||| |||||| || |||  |||||||||||||||||||||||||| |||||||||||    
T  16108126 ttacttataaggtgttcaacatttactcttttatctgatgtggaacatataactcacacttgtacacaacaaca 16108053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 220
Target Start/End: Complemental strand, 35210384 - 35210204
Alignment:
Q  32 tgttgggtcattgggggatc-aggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaa 130  Q
    |||||||||| ||||||| | |||||||  |||||||||||  |||  ||||||||| ||  | ||| ||| ||||||||||| ||| |||||||| |||    
T  35210384 tgttgggtcactgggggagccaggggaccgtccacatcgaggctagagcaaccgcacaagcaaaagaaacaccacactcttacccaaaaccttaaggcaa 35210285  T
Q  131 tgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    ||   |||||||||||||||||||||         | |||||||||||||||| || ||| |||||||  ||||||||||||||||||||    
T  35210284 tggttttatgggtcctcttacttata---------aggtgttcaacctttactattttatccgatgtgagacatataactcacacttgca 35210204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 230
Target Start/End: Original strand, 1950210 - 1950353
Alignment:
Q  78 acaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacc 177  Q
    |||||||||| ||| |||||||| |||||||||||||||| |||||||| || |  | |||||| ||||||||||| ||         | ||||||||||    
T  1950210 acaaccgcacaagtaagagagacgtcacactcttactcaaaaccttaaggcattagatttatggctcctcttacttgta---------aggtgttcaacc 1950300  T
Q  178 tttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| || ||| |||||||| |||||||||||||||||  || ||||||||    
T  1950301 tttactcttttatccgatgtgggacatataactcacacttatacgcaacaaca 1950353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 2378189 - 2378126
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||||||| |||||||||||||||| || ||| |||||||| ||||||||||||||||||||    
T  2378189 ttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 2378126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 92 - 227
Target Start/End: Original strand, 10074030 - 10074156
Alignment:
Q  92 gagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctatt 191  Q
    |||||||||| |||||| |||| ||| |||||||| |||||   |||||||||||||||||||||         | ||||||||| |||||| ||||||     
T  10074030 gagagagacaccacacttttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata---------aggtgttcaacgtttacttttctatc 10074120  T
Q  192 cgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||| | ||||||||||| |||||||||||||    
T  10074121 cgatgtgggatatataactcacccttgcacacaaca 10074156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 593804 - 593878
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||||||||| |||||||||||||||| || ||| |||||||| ||||| ||||||||||||||| || ||||||    
T  593804 ttacttataaggtgttcaacctttactcttttatccgatgtgggacatacaactcacacttgcactcagcaacaa 593878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 97 - 231
Target Start/End: Complemental strand, 2377868 - 2377743
Alignment:
Q  97 agacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattcgatg 196  Q
    ||||| ||||||||||| ||| |||||||| |||||   |||||||||||||||||         ||||| |||||||||||||||| || ||  |||||    
T  2377868 agacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttact---------tataaggtgttcaacctttactcttttaaccgatg 2377778  T
Q  197 tggaacatataactcacacttgcacacaacaacaa 231  Q
    ||| ||||||||||||||||||  |||||||||||    
T  2377777 tgggacatataactcacacttgtgcacaacaacaa 2377743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 61 - 230
Target Start/End: Complemental strand, 16455057 - 16454897
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||||||| ||  ||||||||  ||||||||||| ||| |||||||| ||||    |||||||||||         |||||    
T  16455057 tccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcct---------attac 16454967  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| |||||||||||||||| || |||  ||||||| ||| |||||||||| ||| |||||||||||    
T  16454966 ttataaggtgttcaacctttactcttttatctgatgtgggacacataactcacatttgtacacaacaaca 16454897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 79 - 227
Target Start/End: Original strand, 12092508 - 12092647
Alignment:
Q  79 caaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacct 178  Q
    ||||| ||| ||||||||||||| |||| |||||||||| |||||||| ||||||  |||||| |||||         | |||||||||||| |||||||    
T  12092508 caacctcacaagtgagagagacaccacagtcttactcaaaaccttaaggcaatgagtttatggatcctc---------tcacttataaagtgctcaacct 12092598  T
Q  179 ttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
      ||| |||||| |||||||| |||| |||| ||| |||||||||||||    
T  12092599 ccacttttctatccgatgtgggacatctaacacacccttgcacacaaca 12092647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 14748437 - 14748496
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||| |||||||||||||||| || ||| |||||||| ||||||||||||||||||||    
T  14748437 ttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 14748496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 224
Target Start/End: Complemental strand, 33606034 - 33605971
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacaca 224  Q
    ||||||||||||||||||  ||| ||||||||||||||| |||||||||| ||| |||||||||    
T  33606034 ttataaagtgttcaacctccacttttctattcgatgtgggacatataacttacatttgcacaca 33605971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 2579203 - 2579273
Alignment:
Q  160 cttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||| ||||||||| |||||| || ||| |||||||| |||||||||| ||||||| |||||||||||    
T  2579203 cttataaggtgttcaacttttactcttttatccgatgtgggacatataactaacacttgtacacaacaaca 2579273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 158 - 220
Target Start/End: Complemental strand, 3058288 - 3058226
Alignment:
Q  158 tacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    ||||||||| |||||||||||||||| || ||| |||||||| |||||||||| |||||||||    
T  3058288 tacttataaggtgttcaacctttactattttatccgatgtgggacatataactaacacttgca 3058226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 78 - 216
Target Start/End: Complemental strand, 3415591 - 3415462
Alignment:
Q  78 acaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacc 177  Q
    |||||||||| ||  ||||||||| |||||||||||  || |||||||| |||||   ||||||||||||||||||||||          ||||||||||    
T  3415591 acaaccgcacaagcaagagagacaccacactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttatat---------ggtgttcaacc 3415501  T
Q  178 tttactgttctattcgatgtggaacatataactcacact 216  Q
    |||||| || |||  ||||||| ||||||||||||||||    
T  3415500 tttactattttatgtgatgtgggacatataactcacact 3415462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 5958702 - 5958772
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||||| ||||||||||||||||||| ||| ||||||   |||||||||||||| |||||||| |||||||    
T  5958702 ttataaggtgttcaacctttactgttttatccgatgtaacacatataactcacaattgcacaccacaacaa 5958772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 32460675 - 32460733
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacac 215  Q
    |||||||||| |||||||||||||||| || ||| |||||||| |||||||||||||||    
T  32460675 ttacttataaggtgttcaacctttactattttatacgatgtgggacatataactcacac 32460733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 5832121 - 5832194
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||||||||| || ||| | |||||| |||||||||| |||||||  ||||||||||    
T  5832121 ttacttataaggtgttcaacctttactcttttatccaatgtgggacatataacttacacttgtgcacaacaaca 5832194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 10911689 - 10911621
Alignment:
Q  88 tagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||| |||||||||||||||||||| |||| || ||||| ||||||  ||||| |||||||||||||||    
T  10911689 tagtaagagagacatcacactcttattcaaaactttaaggcaatgagtttatgagtcctcttacttata 10911621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 1846898 - 1846803
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||||||||||  ||| |||||||||| ||  | ||||||| ||||||||||  ||| |||||||| ||||| | |||||||| ||||||||||||    
T  1846898 tccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttatccaaaaccttaaggcaatggatttatgggtgctcttacttata 1846803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 2579500 - 2579595
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    ||||||||||| |||| |||||| ||| ||  ||||||||| || ||| |||| ||| |||||||| ||||||  ||||||| |||||||||||||    
T  2579500 tccacatcgaggttagaacaaccacacaagcaagagagacaccatacttttacccaaaaccttaaggcaatgagtttatgggccctcttacttata 2579595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 2843617 - 2843542
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaaa 232  Q
    |||||||||| ||||||||| |||| | || ||| ||||||| ||||||||||||||| |||  ||||||||||||    
T  2843617 ttacttataaggtgttcaacttttattattttatccgatgtgaaacatataactcacaattgtgcacaacaacaaa 2843542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 8481985 - 8481919
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    ||||||||||||||||||  ||| || |||  |||||||| |||||||||||||||||||||||||||    
T  8481985 ttataaagtgttcaacctccacttttatatctgatgtgga-catataactcacacttgcacacaacaa 8481919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 9062444 - 9062519
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaaa 232  Q
    ||||||||||  ||||||||||||||| || ||| |||||||| |||||||||||||| ||  |||||| ||||||    
T  9062444 ttacttataagatgttcaacctttactattttatccgatgtgggacatataactcacatttatacacaataacaaa 9062519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 33605713 - 33605646
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    ||||||||||||||||||  ||| ||||||  ||||||  ||||||| ||||||||||||||||||||    
T  33605713 ttataaagtgttcaacctccacttttctatctgatgtgagacatatagctcacacttgcacacaacaa 33605646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 230
Target Start/End: Complemental strand, 16454725 - 16454565
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||||||| ||  ||||||||  ||||||||||  ||| | |||||| |||||   |||||||||||||||||            
T  16454725 tccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttact-------- 16454634  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
     ||||| ||||||||| |||| | || |||  ||||||| ||| |||||||||||||| |||||||||||    
T  16454633 -tataaggtgttcaacttttattcttttatctgatgtgggacacataactcacacttgtacacaacaaca 16454565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 1127423 - 1127360
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||||||| |||||||||||||||| || ||  |||||||| | |||||||||||| |||||    
T  1127423 ttacttataaggtgttcaacctttactattttacccgatgtgggatatataactcacagttgca 1127360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 3409723 - 3409660
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    ||||||||||  |||||||| |||||| || |||  ||||||| ||||||||||||||||||||    
T  3409723 ttacttataagatgttcaacttttactattttatctgatgtggtacatataactcacacttgca 3409660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 3409810 - 3409715
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||||||||||  ||| |||||||||| ||  ||||||||| ||||||||||| ||| |  | ||| |||||   |||||||||||||||||||||    
T  3409810 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaaataaaggcaatgggtttatgggtcctcttacttata 3409715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 228
Target Start/End: Original strand, 7588355 - 7588390
Alignment:
Q  193 gatgtggaacatataactcacacttgcacacaacaa 228  Q
    ||||||| ||||||||||||||||||||||||||||    
T  7588355 gatgtgggacatataactcacacttgcacacaacaa 7588390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 2975668 - 2975607
Alignment:
Q  95 agagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||||||||||||||||| |||| || ||||||||| | | ||||||||| |||| ||||||    
T  2975668 agagacatcacactcttattcaaaactttaagacaaaggatttatgggtcatcttgcttata 2975607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 6999891 - 6999964
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||| ||||| ||||||||| |||||| || ||| |||||| | |||||||||||||||||  |||||| ||||    
T  6999891 ttacatataaggtgttcaacttttacttttttatccgatgtaggacatataactcacacttatacacaataaca 6999964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 7e-31; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 62 - 230
Target Start/End: Complemental strand, 50002575 - 50002416
Alignment:
Q  62 ccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattact 161  Q
    ||||||||||  ||| |||||||||| ||| ||||||||| ||||||||||| ||| |||||||||||||| | |||||||||||||||         ||    
T  50002575 ccacatcgaggctagaacaaccgcacaagtaagagagacaccacactcttacccaaaaccttaagacaatggatttatgggtcctctta---------ct 50002485  T
Q  162 tataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    || ||||||||||||||||||| || ||| |||||||  |||||||||||||||||||| |||||||||    
T  50002484 taaaaagtgttcaacctttactcttttatccgatgtgagacatataactcacacttgcaaacaacaaca 50002416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 36608667 - 36608827
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||| ||||||||||||||||| ||||||||||| ||| |||||||||||||| | |||||| |||||         ||||    
T  36608667 tccacatcgaggctagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaagacaatggatttatggatcctc---------ttac 36608757  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||| | ||||||||| |||||| || ||| |||||| | ||||||||||||||||||||||||||||||    
T  36608758 ttatgaggtgttcaacttttactcttttatccgatgttggacatataactcacacttgcacacaacaaca 36608827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 2740763 - 2740693
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  2740763 ttacttataaggtgttcaacctttactgttctatccgatgtgggacatataactcacacttgcacacaaca 2740693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 61 - 227
Target Start/End: Complemental strand, 36629387 - 36629230
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||| ||| ||  ||||||||| ||||||||||| ||| |||||||| ||||||  |||||||||||||||||            
T  36629387 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttact-------- 36629296  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
     ||||| ||||| ||| |||||| |||||| |||||||| |||||||||||||||||| ||||||||    
T  36629295 -tataaggtgtttaacttttacttttctatccgatgtgggacatataactcacacttgaacacaaca 36629230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 97 - 230
Target Start/End: Complemental strand, 3341242 - 3341118
Alignment:
Q  97 agacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattcgatg 196  Q
    ||||||||||||||||| ||| | ||||| |||||||  |||||||||||||||||||||         ||||||| |||||||||| || ||| | |||    
T  3341242 agacatcacactcttacccaaaatcttaaaacaatgatgttatgggtcctcttacttata---------aagtgtttaacctttactcttttatccaatg 3341152  T
Q  197 tggaacatataactcacacttgcacacaacaaca 230  Q
    ||| ||||||||||||||||||||||||||||||    
T  3341151 tgggacatataactcacacttgcacacaacaaca 3341118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 87 - 228
Target Start/End: Original strand, 41707497 - 41707628
Alignment:
Q  87 ctagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgtt 186  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||||||  |||||||| || ||||||||||          |||||||||||||||| ||    
T  41707497 ctagtgagagagacaccacactcttac-caaaaccttaagacaatgagtttatgggttcttttacttatatg---------gtgttcaacctttactctt 41707586  T
Q  187 ctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
     ||| |||||||| |||||||||||||||||| |||||||||    
T  41707587 ttatccgatgtgggacatataactcacacttgtacacaacaa 41707628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 49076541 - 49076614
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| ||||||||||||||||||| ||| |||| ||| ||||||||||||||||||||||||||||||    
T  49076541 ttacttataaggtgttcaacctttactgttttatccgatatggtacatataactcacacttgcacacaacaaca 49076614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 52884950 - 52884877
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||||||||| || ||| |||||||| ||||||||||||||||||||||||||||||    
T  52884950 ttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 52884877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 233
Target Start/End: Complemental strand, 25483486 - 25483323
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||| ||| ||  ||||||||| ||||||||||| ||| |||||||| |||||   |||||| ||||||||||||||  |     
T  25483486 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcttacttataaga- 25483388  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaaaa 233  Q
            ||||||||||||||| || ||| |||||||  |||||||||||||||||||||||||||||||||    
T  25483387 --------tgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaacaacaaaa 25483323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 230
Target Start/End: Complemental strand, 36572152 - 36572009
Alignment:
Q  78 acaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacc 177  Q
    |||||||||| || |||||||||| || ||||| || ||| |||||||| ||||| | ||||||||| |||||||||||         | |||||||||     
T  36572152 acaaccgcacaagcgagagagacaccatactctaacccaaaaccttaaggcaatggatttatgggtcttcttacttata---------aggtgttcaaca 36572062  T
Q  178 tttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| || |||||||||||| |||||||||||||||||| |||||||||||    
T  36572061 tttactcttttattcgatgtgggacatataactcacacttgtacacaacaaca 36572009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 93 - 232
Target Start/End: Original strand, 34646687 - 34646817
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattc 192  Q
    ||||||||| ||||||||||| ||| |||||||| ||||||  ||||| ||||||||| |||||         | ||||||||| ||||||||| ||| |    
T  34646687 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttagttata---------aggtgttcaacatttactgttttatcc 34646777  T
Q  193 gatgtggaacatataactcacacttgcacacaacaacaaa 232  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  34646778 gatgtgggacatataactcacacttgtacacaacaacaaa 34646817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 89 - 227
Target Start/End: Original strand, 3244485 - 3244614
Alignment:
Q  89 agtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttct 188  Q
    ||||||||||||  |||| |||||| ||| || ||||||||||||  |||||||||||||||||||||  |         ||||||||||||||| ||||    
T  3244485 agtgagagagacgacacattcttacccaaaactttaagacaatgagtttatgggtcctcttacttataaga---------tgttcaacctttacttttct 3244575  T
Q  189 attcgatgtggaacatataactcacacttgcacacaaca 227  Q
    || |||||||  |||||||||||||||||||||||||||    
T  3244576 atccgatgtgagacatataactcacacttgcacacaaca 3244614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 93 - 230
Target Start/End: Original strand, 16888854 - 16888983
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattc 192  Q
    ||||||||||||||||||||| ||| ||| |||||||||||  |||| ||| ||||||||||||         | || ||||||||||||| |||||| |    
T  16888854 agagagacatcacactcttacccaaaaccgtaagacaatgagtttataggttctcttacttata---------aggtattcaacctttacttttctatcc 16888944  T
Q  193 gatgtggaacatataactcacacttg-cacacaacaaca 230  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  16888945 gatgtgggacatataactcacacttgccacacaacaaca 16888983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 52884758 - 52884688
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||| |||||||||||||||| || ||| |||||||| |||||||||||||||||||||||||||    
T  52884758 ttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaaca 52884688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 10245983 - 10245910
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||||||||| || ||| ||||||||  |||||||||||||||||||||||||||||    
T  10245983 ttacttataaggtgttcaacctttactcttttatccgatgtggggcatataactcacacttgcacacaacaaca 10245910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 22183270 - 22183430
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| ||||||| || ||||||||||||  ||||||||||  ||| |||||||| |||||   ||||||||||| ||||             
T  22183270 tccacatcgaggctagaacaaccgtacaagtgagagagacgccacactcttatccaaaaccttaaggcaatgggtttatgggtccttttac--------- 22183360  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||| |||||||| |||||| || ||| |||||||| | ||||||||||||||||||||||||||||    
T  22183361 ttataaattgttcaacatttactcttttatccgatgtgggatatataactcacacttgcacacaacaaca 22183430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 43827589 - 43827495
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    ||||||||||| |||| |||||||||| ||| ||||||||| |||||||||| || | |||||||| ||||||| ||||||||||||||| |||||    
T  43827589 tccacatcgaggttagaacaaccgcacaagtaagagagacaccacactctta-tccaaaccttaaggcaatgaatttatgggtcctcttatttata 43827495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 222
Target Start/End: Complemental strand, 49303056 - 49302902
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||| ||||  ||| ||||| ||| ||||||||||| ||| |||||||| |||||   ||||||||||||||||||           
T  49303056 tccacatcgaggatagaacaatcgcataagtaagagatacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactt------- 49302964  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcaca 222  Q
    ||||||  ||||||||||||||| || |||| ||||||| ||||||||||||||||| ||||    
T  49302963 ttataagatgttcaacctttacttttttatttgatgtgggacatataactcacacttacaca 49302902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 61 - 227
Target Start/End: Original strand, 32941129 - 32941286
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||||||| ||  |||||||| |||||||||||| ||| |||||||| ||||||  ||||| | ||||||| |||||        
T  32941129 tccacatcgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaaggcaatgagtttatgagccctcttatttata---- 32941224  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
         | ||||||||||||||||||||| | ||||||   |||||||||||||||||||| ||||||    
T  32941225 -----aggtgttcaacctttactgttctttccgatgtaagacatataactcacacttgcagacaaca 32941286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 54741271 - 54741341
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||| |||||||||||||||| |||||| |||||||  |||||||| ||||||||||||||||||    
T  54741271 ttacttataaggtgttcaacctttacttttctatccgatgtgagacatataattcacacttgcacacaaca 54741341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 44620723 - 44620654
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaac 226  Q
    |||||||||||||||||||||| |||| ||  || |||||||| ||||||||||||||||||||||||||    
T  44620723 ttacttataaagtgttcaacctctactatttcatccgatgtgggacatataactcacacttgcacacaac 44620654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 154
Target Start/End: Complemental strand, 54936376 - 54936253
Alignment:
Q  32 tgttgggtcattggggga--tcaggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagaca 129  Q
    |||||||||| |||||||  || ||||||  |||||||||||  ||| |||||| || |||||||||||||| ||||||||||| ||| |||||||| ||    
T  54936376 tgttgggtcactgggggagctcgggggactgtccacatcgaggctagaacaaccaca-tagtgagagagacaccacactcttacccaaaaccttaaggca 54936278  T
Q  130 atgaacttatgggtcctcttactta 154  Q
    |||   |||||||||||||||||||    
T  54936277 atgggtttatgggtcctcttactta 54936253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 227
Target Start/End: Complemental strand, 2741179 - 2741064
Alignment:
Q  103 cacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattcgatgtggaac 202  Q
    ||||||||||| ||| |||||||| ||||| | |||||||||||||||||||||         | || ||||||||||||| ||||||  ||||||| ||    
T  2741179 cacactcttacccaaaaccttaaggcaatggagttatgggtcctcttacttata---------aggtattcaacctttactattctatctgatgtgggac 2741089  T
Q  203 atataactcacacttgcacacaaca 227  Q
    |||||||||||||||||||| ||||    
T  2741088 atataactcacacttgcacataaca 2741064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 231
Target Start/End: Original strand, 4955341 - 4955484
Alignment:
Q  79 caaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacct 178  Q
    ||||||||| ||| ||||||||  ||||||||||| ||| |||||||| |||||   ||||| |||||||||||||||         | |||||||||||    
T  4955341 caaccgcacaagtaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttata---------aggtgttcaacct 4955431  T
Q  179 ttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    | ||| || ||| |||| ||  |||||||||||||||||||||||||||||||    
T  4955432 taactattttatccgatatgagacatataactcacacttgcacacaacaacaa 4955484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 39404081 - 39404013
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaa 225  Q
    ||||||||||||||||||||||||||| || ||||| |||| | |||||||||||||||||| ||||||    
T  39404081 ttacttataaagtgttcaacctttactcttttattcaatgtaggacatataactcacacttgtacacaa 39404013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 3700428 - 3700357
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||||||| ||||||||| |||||| || ||| |||||| | ||||||||||||||||||||||||||||    
T  3700428 ttacttataaggtgttcaacatttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 3700357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 49880223 - 49880160
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||||||| |||||||||||||||| || ||||| |||||| ||||||||||||||||||||    
T  49880223 ttacttataaggtgttcaacctttactattttattcaatgtgggacatataactcacacttgca 49880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 1731752 - 1731814
Alignment:
Q  169 tgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||||||||||||||||| |||  ||||||| |||||||||||||| ||||||||||||||||    
T  1731752 tgttcaacctttactgttttatctgatgtgggacatataactcacatttgcacacaacaacaa 1731814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 4390194 - 4390268
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||||||||| |||||||||||||||| || |||  ||||||| | || ||||||||||||||||||||||||||    
T  4390194 ttacttataaggtgttcaacctttactcttttatctgatgtgggatatgtaactcacacttgcacacaacaacaa 4390268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 20825895 - 20825829
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||| |||||||||||||||| || ||| ||||||||||||||||||||||| ||| ||||||||    
T  20825895 ttataaggtgttcaacctttactcttttatccgatgtggaacatataactcacatttgtacacaaca 20825829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 227
Target Start/End: Original strand, 39792866 - 39793023
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||| ||| ||  ||||||||| ||||||||||| ||| |||||||| ||||||  ||| || ||||||| ||||||        
T  39792866 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttacggttcctctttcttata---- 39792961  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
         | ||||||||| |||||| ||||||  ||||||| |||||||||||||||||| ||||||||    
T  39792962 -----aggtgttcaacatttacttttctatctgatgtgggacatataactcacacttgtacacaaca 39793023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 220
Target Start/End: Original strand, 50630778 - 50630911
Alignment:
Q  78 acaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacc 177  Q
    |||||||||| ||  ||||||||| ||||||||||| ||| |||||||| |||||   ||||||||||||         |||||||||| ||||||||||    
T  50630778 acaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctc---------ttacttataatgtgttcaacc 50630868  T
Q  178 tttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||| || ||| |||||| | ||||||||||||| ||||||    
T  50630869 tttactattttatccgatgtaggacatataactcacgcttgca 50630911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 54017795 - 54017872
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtgg--aacatataactcacacttgcacacaacaacaaa 232  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||   | |||||||||||| |||||||||||||||||    
T  54017795 ttacttataaggtgttcaacctttactgttttatccgatgtgggatatatataactcacatttgcacacaacaacaaa 54017872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 16889629 - 16889706
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttg-cacacaacaacaaaa 233  Q
    |||||||||| || ||||||||||||| |||||| |||| ||  |||||||||||||||||| |||||||||||||||    
T  16889629 ttacttataaggtattcaacctttacttttctatccgatttgagacatataactcacacttgccacacaacaacaaaa 16889706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 22028054 - 22028127
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||||||  | || ||| |||||||| |||||||| |||||||||||||||||||||    
T  22028054 ttacttataaggtgttcaacctttcgtattttatccgatgtgggacatataagtcacacttgcacacaacaaca 22028127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 39404461 - 39404388
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||| ||||||||| || |||  ||||||| |||||||||||||||||| |||||||||||    
T  39404461 ttacttataaggtgttccacctttactcttttatctgatgtgggacatataactcacacttgtacacaacaaca 39404388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 44621489 - 44621420
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaac 226  Q
    |||||||||| ||||| ||||||||||||| ||| | |||| | ||||||||||||||||||||||||||    
T  44621489 ttacttataaggtgtttaacctttactgttttatcccatgttggacatataactcacacttgcacacaac 44621420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 27 - 220
Target Start/End: Original strand, 55933096 - 55933280
Alignment:
Q  27 aaatttgttgggtcattgggggatcaggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaag 126  Q
    |||| |||||||||| |||| | |  ||||||  |||||||||||  ||| ||||| | || ||| ||||||||| ||||||||||| ||| || |||||    
T  55933096 aaatgtgttgggtcactgggagcttgggggaccgtccacatcgaggctagaacaactgtacaagtaagagagacaccacactcttacccaaaactttaag 55933195  T
Q  127 acaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
     |||||   ||||||||||||         |||||||||| |||||||||| ||||| || ||| |||||| | ||||||||||||||||||||    
T  55933196 gcaatgggtttatgggtcctc---------ttacttataaggtgttcaacccttactattttatccgatgtaggacatataactcacacttgca 55933280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 11348423 - 11348495
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    ||||||||||||||||||||  ||| || |||  ||||| |||||||||||||||| ||||||||||||||||    
T  11348423 acttataaagtgttcaacctccactattttatctgatgtagaacatataactcacaattgcacacaacaacaa 11348495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 12197438 - 12197370
Alignment:
Q  160 cttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||||||| || |||||| ||| ||||||| ||||||| || |||||||||||||||||||||||||    
T  12197438 cttataaagtattgaaccttcacttttctatttgatgtgggacctataactcacacttgcacacaacaa 12197370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 28034290 - 28034222
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    ||||||||||||||||||||  ||| |||||| ||||| || |||||||| ||||||||||||||||||    
T  28034290 acttataaagtgttcaacctccacttttctatccgatgcgggacatataattcacacttgcacacaaca 28034222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 61 - 211
Target Start/End: Complemental strand, 44620503 - 44620362
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||| || |||| |||||| ||| ||  ||||| ||||||||||||||| ||| |||||||| |||||   |||||||  ||||  |||||         
T  44620503 tccacatcaaggttagaacaaccacacaagcaagagaaacatcacactcttacccaaaaccttaaggcaatgggtttatggg--ctct--cttat----- 44620413  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactc 211  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  44620412 ttataaggtgttcaacctttactgttttatccgatgtggaacatataactc 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 51768066 - 51768225
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    ||||||||||| |||| |||| | ||  ||| |||||||||||  ||| |||| ||| |||||||||||||||  ||||| ||||||||| |||||        
T  51768066 tccacatcgaggttagaacaatcccataagtaagagagacatcgtacttttacccaaaaccttaagacaatgagtttatgagtcctcttatttata---- 51768161  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaac 229  Q
         | ||||||||| |||||| || |||||||| | | |||||||||||||| ||||||||||||||    
T  51768162 -----aggtgttcaacatttactcttatattcgatataggacatataactcacatttgcacacaacaac 51768225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 23817687 - 23817782
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||||||||||  ||| |||||| ||||||  ||||||||| ||||||||||| ||| |||||||| ||||||  |||||  ||||||||||||||    
T  23817687 tccacatcgaggctagaacaaccacactagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgaatcctcttacttata 23817782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 45496923 - 45496860
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    ||||||||| ||||||||||| ||| |||||||||||||||  |||| ||||||||||||||||    
T  45496923 agagagacaccacactcttacccaaaaccttaagacaatgagtttataggtcctcttacttata 45496860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 231
Target Start/End: Original strand, 49076826 - 49076997
Alignment:
Q  50 tcaggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctctt 149  Q
    |||||||||| |||||||||||  ||| |||||||||| ||  ||| ||||| |||||||| || ||| ||||||||   |||   |||||||| |||||    
T  49076826 tcaggggacagtccacatcgaggctagaacaaccgcacaagcaagaaagacaccacactctaacccaaaaccttaaggttatgggtttatgggttctctt 49076925  T
Q  150 acttatattacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||          |||| |||||||||||||||| || ||  | || |||||||||||||||||||||||||||||| ||||    
T  49076926 act----------ataaggtgttcaacctttactattttagccaatatggaacatataactcacacttgcacacaacgacaa 49076997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 223
Target Start/End: Original strand, 54017601 - 54017754
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||| ||  ||  |||||||||||||||||||||  || |||||||| |||||   ||||||||||||         ||||    
T  54017601 tccacatcgaggctagaacaaccacataagcaagagagacatcacactcttacctaaaaccttaaggcaatgggtttatgggtcctc---------ttac 54017691  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacac 223  Q
    ||||||  ||||||||||||||| || |||  || |||| |||||||||||||||||||||||    
T  54017692 ttataagatgttcaacctttactattttatctgacgtgggacatataactcacacttgcacac 54017754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 44620359 - 44620286
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||||||||| || ||| | |||||| |||||||||||| | ||| |||||||||||    
T  44620359 ttacttataaggtgttcaacctttactattttatcccatgtgggacatataactcatatttgtacacaacaaca 44620286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 45489424 - 45489497
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||  |||||||||||||||| || ||| |||||||  |||||||| ||||||||| |||||||||||    
T  45489424 ttacttatatggtgttcaacctttactcttttatccgatgtgagacatataattcacacttgtacacaacaaca 45489497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 225
Target Start/End: Complemental strand, 3340988 - 3340802
Alignment:
Q  32 tgttgggtcattggggga--tcaggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagaca 129  Q
    |||||||||| |||||||  ||||| |||  |||||||||||  ||| |||||| ||| ||  ||| ||||| ||||||||||| ||| |||||||| ||    
T  3340988 tgttgggtcactgggggagctcaggagaccgtccacatcgaggctagaacaaccccacaagcaagaaagacaccacactcttacccaaaaccttaaggca 3340889  T
Q  130 atgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaa 225  Q
     ||   |||||||||||||||||         ||||| ||| |||||||||||| ||  ||  |||| || |||||||||||||||||||||||||    
T  3340888 gtgggtttatgggtcctcttact---------tataaggtgctcaacctttactctttcatctgatgcgggacatataactcacacttgcacacaa 3340802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 45050649 - 45050593
Alignment:
Q  172 tcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||||||||| || |||| ||||||  ||||||||||||||||||||||||||||    
T  45050649 tcaacctttactcttttatttgatgtgagacatataactcacacttgcacacaacaa 45050593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 50459784 - 50459724
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacactt 217  Q
    ||||||||||  ||||||||||||||| || ||  ||||||||||||||||||||||||||    
T  50459784 ttacttataagatgttcaacctttactcttttaaccgatgtggaacatataactcacactt 50459724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 22028407 - 22028466
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttact 152  Q
    ||||||||| ||||||||||| ||| || ||||||||||||  |||||||||||||||||    
T  22028407 agagagacaccacactcttacccaaaacattaagacaatgagtttatgggtcctcttact 22028466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 44621152 - 44621057
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||||||||||  ||| | |||||||| ||  ||||| ||| ||||||||||| ||| |||||||||||||||  ||||| | |||||||||||||    
T  44621152 tccacatcgaggctagaataaccgcacaagcaagagaaacaccacactcttacccaaaaccttaagacaatgagtttatgtgccctcttacttata 44621057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 54108976 - 54108908
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||| |||||||||||||||| || ||| |||||||| ||  |||||| ||||||||||||||||    
T  54108976 ttacttataaggtgttcaacctttactattttatccgatgtgggac--ataactgacacttgcacacaaca 54108908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 44621008 - 44620934
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatg-tggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| ||||||||||||||| ||| ||| ||||| ||| |||| |||||||||||||  ||||||||||    
T  44621008 ttacttataaggtgttcaacctttacagttttatccgatgttgggacatctaactcacacttgtccacaacaaca 44620934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 15841392 - 15841445
Alignment:
Q  79 caaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatg 132  Q
    ||||| ||| ||||||||||||||||||||||||| ||| |||||||| |||||    
T  15841392 caaccacacaagtgagagagacatcacactcttacccaaaaccttaaggcaatg 15841445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 20826280 - 20826223
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcaca 214  Q
    |||||||||| ||||||||| |||||| || ||| |||||||| ||||||||||||||    
T  20826280 ttacttataacgtgttcaacttttactattttatccgatgtgggacatataactcaca 20826223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 31691260 - 31691207
Alignment:
Q  103 cacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    ||||||||||| ||| |||||||| ||||||  |||||||||||||||||||||    
T  31691260 cacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttata 31691207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 50788086 - 50788139
Alignment:
Q  167 agtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    ||||||||||||||||| || ||| |||||||| |||||||||| |||||||||    
T  50788086 agtgttcaacctttactattttatccgatgtgggacatataacttacacttgca 50788139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 54343094 - 54343147
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataact 210  Q
    |||||||||| |||||||||||||||| || ||| |||||||| ||||||||||    
T  54343094 ttacttataaggtgttcaacctttactattttatccgatgtgggacatataact 54343147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 760250 - 760194
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacac 215  Q
    |||||||||||  |||||||| | | ||||||||||||||| |||||||||||||||    
T  760250 acttataaagttctcaaccttcatttttctattcgatgtgggacatataactcacac 760194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 19504757 - 19504694
Alignment:
Q  168 gtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    ||||||||| |||||| || ||| |||| ||| |||||||||||| ||||| ||||||||||||    
T  19504757 gtgttcaacttttactattttatccgatatgggacatataactcatacttgtacacaacaacaa 19504694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 41370420 - 41370357
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||||||| || |||||| |||||| || ||| |||| ||| ||||||||||||||||||||    
T  41370420 ttacttataaggttttcaacatttactattttatccgatttgggacatataactcacacttgca 41370357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 230
Target Start/End: Original strand, 23817782 - 23817812
Alignment:
Q  200 aacatataactcacacttgcacacaacaaca 230  Q
    |||||||||||||||||||||||||||||||    
T  23817782 aacatataactcacacttgcacacaacaaca 23817812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 54109045 - 54108968
Alignment:
Q  78 acaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||||||||| ||  ||||||||| ||||||||||| ||| || ||||| |||||   |||||||||||||||||||||    
T  54109045 acaaccgcacaagcaagagagacaccacactcttacccaaaac-ttaaggcaatgggtttatgggtcctcttacttata 54108968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 23556963 - 23557024
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcaca 222  Q
    ||||||| ||||||||||  ||| |||||| ||||||  ||||| |||||||||||||||||    
T  23556963 ttataaaatgttcaacctccacttttctatccgatgtaaaacatttaactcacacttgcaca 23557024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 156
Target Start/End: Original strand, 34004593 - 34004685
Alignment:
Q  63 cacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||||||||  ||| |||||||||| || |||||||||  ||||||||||   || ||||||||  |||||  |||||||||||||||||||||    
T  34004593 cacatcgaggctagaacaaccgcacaagggagagagacggcacactcttatcgaaaaccttaagg-aatgagtttatgggtcctcttacttata 34004685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 10246408 - 10246340
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    ||||||||  ||||||||||||||| || ||| |||| ||  |||||||||  ||||||||||||||||    
T  10246408 acttataagatgttcaacctttactcttttatccgatttgagacatataacagacacttgcacacaaca 10246340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 11706636 - 11706688
Alignment:
Q  179 ttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    ||||| || ||| |||||||| ||||| ||||||| |||||||||||||||||    
T  11706636 ttacttttttatccgatgtgggacatacaactcacccttgcacacaacaacaa 11706688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 54108599 - 54108526
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgc-acacaacaacaa 231  Q
    |||||||||| |||||||||||||||| || ||| | || ||| ||  ||||||||||||||| ||||||||||||    
T  54108599 ttacttataaggtgttcaacctttactattttatcctatatgggac--ataactcacacttgcaacacaacaacaa 54108526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 1e-29; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 225
Target Start/End: Complemental strand, 35150185 - 35150002
Alignment:
Q  33 gttgggtcattgggggatca-ggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaat 131  Q
    |||||||||| |||||| || ||||||  ||||||| ||| |||| |||||| ||||||||||||||||| |||||| |||| ||| |||||||||||||    
T  35150185 gttgggtcatggggggagcaaggggacggtccacattgaggttagaacaaccacactagtgagagagacaccacacttttacccaaaaccttaagacaat 35150086  T
Q  132 gaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaa 225  Q
    | | |||||||||          | |||||||||| |||||||||||| ||| || ||| |||||||| |||||||||||||||||||||||||    
T  35150085 ggatttatgggtc----------tcttacttataaggtgttcaaccttgactcttttatccgatgtgggacatataactcacacttgcacacaa 35150002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 62 - 230
Target Start/End: Complemental strand, 26074761 - 26074602
Alignment:
Q  62 ccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattact 161  Q
    |||||||||| ||||  ||||| ||||||||||||||||| ||||||||||| ||| |||||||| |||||   |||||||||||||||||             
T  26074761 ccacatcgaggttagagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttact--------- 26074671  T
Q  162 tataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||| |||||||||||||||| || ||| |||| |||||||||||||||||||||| |||||| ||||    
T  26074670 tataaggtgttcaacctttactcttttatccgatatggaacatataactcacacttgtacacaaaaaca 26074602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 61 - 220
Target Start/End: Original strand, 26590918 - 26591068
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    ||||||||||| |||| |||||| ||||||||||||||||  ||||||||||||||| |||||||| || |||| |||||| |||||         ||||    
T  26590918 tccacatcgaggttagaacaaccacactagtgagagagacgccacactcttactcaaaaccttaaggcattgaatttatggatcctc---------ttac 26591008  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||| |||||||||||||||| ||| ||||||| |||||||| ||| |||||||||||    
T  26591009 ttataaggtgttcaacctttacttttcgattcgatatggaacatttaaatcacacttgca 26591068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 61 - 215
Target Start/End: Complemental strand, 38427697 - 38427553
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    ||||||||||| |||| |||||||||| |||||||||||| |||||||||||| ||| |||||||||||||| | | ||||||||||          |||    
T  38427697 tccacatcgaggttagaacaaccgcacaagtgagagagacgtcacactcttacacaaaaccttaagacaatggattaatgggtcctc----------tac 38427608  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacac 215  Q
    ||||||  ||||||||||||||| |||||| | |||||| |||||||||||||||    
T  38427607 ttataagatgttcaacctttacttttctatccaatgtgggacatataactcacac 38427553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 12662747 - 12662823
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaaaa 233  Q
    ||||||||||| ||||||||||||||| || ||| |||||||| |||||||||||||||||||||||||||||||||    
T  12662747 ttacttataaaatgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaacaaaa 12662823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 61 - 231
Target Start/End: Complemental strand, 15370249 - 15370088
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||| | ||| ||  ||||||||| ||||||||||| ||| |||||||| |  || | ||||||||||||         ||||    
T  15370249 tccacatcgaggctagaacaatcccacaagcaagagagacaccacactcttacccaaaaccttaaggctgtggatttatgggtcctc---------ttac 15370159  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    ||||||  ||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||    
T  15370158 ttataagatgttcaacctttactattttattcgatgtgggacatataactcacacttgcacacaacaacaa 15370088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 299552 - 299479
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| ||||||||||||||||||| ||| |||||||| ||||||||||||||||||| ||||||||||    
T  299552 ttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgcgcacaacaaca 299479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 62 - 227
Target Start/End: Original strand, 26074155 - 26074311
Alignment:
Q  62 ccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattact 161  Q
    |||||||||| ||||  ||||| ||||||||||||||||| ||||||||||| ||| |||||||| |||||   | ||||||||||         ||||     
T  26074155 ccacatcgaggttagagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggttcatgggtcctc---------ttaca 26074245  T
Q  162 tataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    ||| | |||||||||||||||| || ||| |||||||  |||||||||||||||||||||||||||    
T  26074246 tatgaggtgttcaacctttacttttttatccgatgtgtgacatataactcacacttgcacacaaca 26074311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 40296323 - 40296483
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||||||| ||  ||||||||| ||||||||||| ||| |||| ||| |||||   |||||||||||||||||||||        
T  40296323 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgggtttatgggtcctcttacttata---- 40296418  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
         | ||||||||||||| || || ||| |||||||| |||||||||||||||||||||||| |||||    
T  40296419 -----aggtgttcaaccttttctattttatccgatgtgggacatataactcacacttgcacacaccaaca 40296483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 1028612 - 1028682
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||||||||||| |||||||| |||||| |||||||| |||||||||||||||||| ||||||||    
T  1028612 ttacttataaagtgttcatcctttacttttctatccgatgtgggacatataactcacacttgtacacaaca 1028682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 36492312 - 36492386
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||||||||| |||||||||||||||| || ||| |||||||| |||||||||||||||||||| ||||||||||    
T  36492312 ttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgcaaacaacaacaa 36492386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 36568664 - 36568732
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||| ||||||||| |||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  36568664 acttataaggtgttcaacttttacttttctatccgatgtgggacatataactcacacttgcacacaaca 36568732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 11417072 - 11417143
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||||||||| || ||| |||||||||||||||||||  ||||||||||||||||||    
T  11417072 ttacttataaggtgttcaacctttactattttatccgatgtggaacatataact--cacttgcacacaacaaca 11417143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 13415855 - 13415925
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||| ||||||||||||||||  | ||| |||||||| |||||||||||||||||||||||||||    
T  13415855 ttacttataaggtgttcaacctttactaatttatccgatgtgggacatataactcacacttgcacacaaca 13415925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 61 - 227
Target Start/End: Complemental strand, 41632932 - 41632775
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||| ||  |||||||||| ||  ||||||||| ||||||||||| ||| | |||||  || ||   ||||||||||||         ||||    
T  41632932 tccacatcgagactaaaacaaccgcacaagcaagagagacaccacactcttacccaaaatcttaaagcattgggtttatgggtcctc---------ttac 41632842  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||| |||||||||||||||| |||||| |||||||  |||||||||| ||||||||||||||||    
T  41632841 ttataaggtgttcaacctttacttttctatccgatgtgagacatataacttacacttgcacacaaca 41632775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 6224259 - 6224186
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||||||||| || ||| ||| |||| |||||||||||||||||| |||||||||||    
T  6224259 ttacttataaggtgttcaacctttactcttttatccgaagtgggacatataactcacacttgtacacaacaaca 6224186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 26074878 - 26074950
Alignment:
Q  158 tacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||||  |||||||||||||||| || ||| |||||||| |||||||||||||||||| |||||||||||    
T  26074878 tacttatattgtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaacaaca 26074950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 61 - 220
Target Start/End: Complemental strand, 624346 - 624196
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||| ||| ||||||||||||| ||||||||||| ||| |||| ||| | |||   ||||||||| |||||||||||        
T  624346 tccacatcgaggctagaacaaccccacaagtgagagagacaccacactcttacccaaaacctcaaggctatgggtttatgggtcatcttacttata---- 624251  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
         | |||||||||||||||| || ||| | |||||| ||||||||||||||||||||    
T  624250 -----acgtgttcaacctttactattttatacaatgtgggacatataactcacacttgca 624196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 3295439 - 3295509
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||| |||||||||| ||||||||||    
T  3295439 ttacttataaggtgttcaacctttactattttatccgatgtggaacatat-actcacacttccacacaacaa 3295509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 61 - 220
Target Start/End: Complemental strand, 6500600 - 6500451
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||||||| ||  ||||||||| ||||||||||| ||| |||||||| |||||   |||  ||||||||||||||||        
T  6500600 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttaaaggtcctcttacttata---- 6500505  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
         | |||||||||||||||| || ||| |||||||| ||||||||||||||||||||    
T  6500504 -----aggtgttcaacctttactattttatccgatgtgg-acatataactcacacttgca 6500451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 61 - 220
Target Start/End: Complemental strand, 6500972 - 6500823
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| | |||||||| ||| ||||||||| ||||||||||  ||| |||||||| ||||||  ||||||||||| ||| |||||        
T  6500972 tccacatcgaggctagaataaccgcacaagtaagagagacaccacactcttatccaaaaccttaaggcaatgagtttatgggtccttttatttata---- 6500877  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
         | |||||||||||||||| || ||| |||||||| ||||||||||||||||||||    
T  6500876 -----aggtgttcaacctttactattttatccgatgtgg-acatataactcacacttgca 6500823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 26075257 - 26075331
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||||||||| |||||||||||||||| || ||| |||||||  |||||||| ||||||||| ||||||||||||    
T  26075257 ttacttataaggtgttcaacctttactcttttatccgatgtgagacatataaatcacacttgtacacaacaacaa 26075331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 25327998 - 25327925
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| ||||||||| ||||||||| ||| |||||| | |||||||||||||||||  |||||||||||    
T  25327998 ttacttataaggtgttcaacttttactgttttatccgatgtaggacatataactcacacttagacacaacaaca 25327925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 31509684 - 31509615
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||||||||| |||||||  ||| |||||| |||||||  ||||||||||||||||||||||||||||    
T  31509684 acttataaagtgctcaacctccacttttctatccgatgtgagacatataactcacacttgcacacaacaa 31509615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 42405691 - 42405764
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| ||| |||||||||||||||| || ||| |||||| | |||||||||||||||||| |||||||||||    
T  42405691 ttacttgtaaggtgttcaacctttactattttatccgatgttggacatataactcacacttgtacacaacaaca 42405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 61 - 220
Target Start/End: Complemental strand, 32487543 - 32487394
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||| ||  ||  ||||| || |||||||||||| ||| |||||||| |||||   ||||||||||||||||||||         
T  32487543 tccacatcgaggctagaacaaccacataagcaagagatacgtcacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttat----- 32487449  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
         | |||||||||||||||| || ||| |||||||| ||||||||||||||||||||    
T  32487448 -----aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 32487394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 35150789 - 35150737
Alignment:
Q  178 tttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| || |||||||||||| ||||||||||||||||||||||||||||||    
T  35150789 tttactcttttattcgatgtgggacatataactcacacttgcacacaacaaca 35150737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 35151080 - 35151028
Alignment:
Q  178 tttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| || |||||||||||| ||||||||||||||||||||||||||||||    
T  35151080 tttactcttttattcgatgtgggacatataactcacacttgcacacaacaaca 35151028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 623881 - 623818
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||| |||||||||||||||||||| || ||| |||||||  ||||||||||||||||||||    
T  623881 ttacttgtaaagtgttcaacctttactattatatccgatgtgagacatataactcacacttgca 623818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 3295110 - 3295176
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacaca 224  Q
    |||||||||| |||||||||||||||| || ||| |||||||| |||||| |||||||||||||||||    
T  3295110 ttacttataaggtgttcaacctttactattttatccgatgtgggacatat-actcacacttgcacaca 3295176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 301022 - 300948
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||||||||| || |||||||||||||||| |||  ||||||| ||||||||| |||||||| |||||| |||||    
T  301022 ttacttataaggtattcaacctttactgttttatctgatgtgggacatataacccacacttgtacacaaaaacaa 300948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 18603215 - 18603276
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttg 218  Q
    |||||||||| |||||||||||||||| || |||  ||||||| ||||||||||||||||||    
T  18603215 ttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttg 18603276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 34753120 - 34753193
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| ||||||||| |||||| |||||| | |||||| |||||||||| ||| ||| |||||||||||    
T  34753120 ttacttataaggtgttcaacttttacttttctatccaatgtgggacatataacttacatttgtacacaacaaca 34753193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 35914912 - 35914839
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||||||| ||||||||||||||| || ||| |||||||  |||||||||||| ||||  |||||||||||    
T  35914912 ttacttataaaatgttcaacctttactcttttatccgatgtgtgacatataactcatacttatacacaacaaca 35914839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 9498749 - 9498812
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||||||| |||||||||||||||| ||||||  ||||||  |||||||||||||| |||||    
T  9498749 ttacttataaggtgttcaacctttactattctatctgatgtgagacatataactcacatttgca 9498812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 27502131 - 27502194
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||||||| ||||| |||||||||| || ||| | |||||| ||||||||||||||||||||    
T  27502131 ttacttataaggtgtttaacctttactattttatccaatgtgggacatataactcacacttgca 27502194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 24489299 - 24489369
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    ||||| |||| ||||| ||||||| || ||||||  ||||||| |||||||||||||||||| ||||||||    
T  24489299 ttactaataaggtgtttaaccttttcttttctatctgatgtgggacatataactcacacttgaacacaaca 24489369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 36522266 - 36522340
Alignment:
Q  82 ccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||||| ||||||||||||| ||||||||||| ||| ||||||||| ||||   |||| |||||||| |||||||    
T  36522266 ccgcacaagtgagagagacaccacactcttacccaaaaccttaagataatgggtttattggtcctctcacttata 36522340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 26074381 - 26074320
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttg 218  Q
    |||||||||| |||||||| ||||| | ||||||  ||||||| ||||||||||||||||||    
T  26074381 ttacttataaggtgttcaatctttagttttctatctgatgtgggacatataactcacacttg 26074320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 41170697 - 41170640
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcaca 214  Q
    ||||||||||  ||||||||||||||| || ||| |||||||| ||||||||||||||    
T  41170697 ttacttataagatgttcaacctttactattttatccgatgtgggacatataactcaca 41170640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 623951 - 623903
Alignment:
Q  78 acaaccgcactagtgagagagacatcacactcttactcaacaccttaag 126  Q
    |||||| ||| ||||||||||||| ||||||||||||||| ||||||||    
T  623951 acaaccccacaagtgagagagacaccacactcttactcaaaaccttaag 623903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 9510630 - 9510686
Alignment:
Q  172 tcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||||  ||| |||||||| ||||| |||||||||||||||||| ||||||||||    
T  9510630 tcaacctccacttttctattcaatgtgaaacatataactcacactttcacacaacaa 9510686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 13786036 - 13786104
Alignment:
Q  88 tagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||||||||||||||||||||||||  ||| | |||||||||||  | ||| ||||| |||||||||||    
T  13786036 tagtgagagagacatcacactcttatccaaaatcttaagacaatagatttacgggtcatcttacttata 13786104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 35167838 - 35167898
Alignment:
Q  53 ggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttac 113  Q
    ||||||| ||||||||||   ||| |||||| |||||||| ||||||||||||||||||||    
T  35167838 ggggacagtccacatcgatgctagaacaaccacactagtgtgagagacatcacactcttac 35167898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 36522001 - 36522061
Alignment:
Q  167 agtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    ||||||||||||  ||| ||||||  ||||||| ||||||||||||||||||| |||||||    
T  36522001 agtgttcaacctcaacttttctatctgatgtgggacatataactcacacttgcgcacaaca 36522061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 5723886 - 5723949
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||| ||||| ||||||||| |||| | || ||| |||||||| ||||||||||||||||||||    
T  5723886 ttacatataatgtgttcaacttttattattttatccgatgtgggacatataactcacacttgca 5723949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 9498694 - 9498757
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    ||||||||| ||||||||||| ||| | |||||| |||||   |||||||||||||||||||||    
T  9498694 agagagacaccacactcttacccaaaatcttaaggcaatgggtttatgggtcctcttacttata 9498757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 29549350 - 29549413
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||||||  ||||||| |||||||| || |||  ||| ||||||||||||||||||||||||    
T  29549350 ttacttatatggtgttcatcctttactattttatctgatatggaacatataactcacacttgca 29549413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 39309743 - 39309677
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||| ||||||||| |||||  || ||| |||||||| |||||||||||| ||||| ||||||||    
T  39309743 ttataatgtgttcaacatttacccttttatccgatgtgggacatataactcatacttgtacacaaca 39309677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 1028525 - 1028590
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaag 126  Q
    |||||||||||  ||| |||||||||| ||||||||||||  |||||||||||  || ||||||||    
T  1028525 tccacatcgaggctagaacaaccgcacaagtgagagagacgccacactcttaccaaaaaccttaag 1028590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 7768913 - 7768852
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttg 218  Q
    |||||||||| |||||||||||||| | || ||| |||||| | | ||||||||||||||||    
T  7768913 ttacttataaggtgttcaacctttattattttatccgatgtaggatatataactcacacttg 7768852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 41170742 - 41170689
Alignment:
Q  103 cacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    ||||||||||| ||| |||||||| |||||   |||||||||||||||||||||    
T  41170742 cacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata 41170689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 220
Target Start/End: Complemental strand, 5660330 - 5660298
Alignment:
Q  188 tattcgatgtggaacatataactcacacttgca 220  Q
    ||||||||||||||||||||||||||| |||||    
T  5660330 tattcgatgtggaacatataactcacatttgca 5660298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 78 - 232
Target Start/End: Original strand, 12114587 - 12114732
Alignment:
Q  78 acaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacc 177  Q
    |||||||||| ||| ||||||||| ||||||||||| ||| ||||||||||||||   |||||||||||||||||||||         | ||||||||||    
T  12114587 acaaccgcacaagtaagagagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttata---------aggtgttcaacc 12114677  T
Q  178 tttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaaa 232  Q
    |||||| |||||| |||||||| | |||||||| |||||||||||||||||||||    
T  12114678 tttacttttctatccgatgtgggatatataacttacacttgcacacaacaacaaa 12114732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 42342396 - 42342556
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    ||||||| |||  ||| |||||||||| ||  |||||||| |||||||||||| ||| |||||||||||||| | ||||||||||||         ||||    
T  42342396 tccacattgaggctagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaagacaatggatttatgggtcctc---------ttac 42342486  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| ||||| |||||||||| || |||  ||||||| ||||||||||||||||||||||||||||||    
T  42342487 ttataaggtgttgaacctttactcttttatcggatgtgggacatataactcacacttgcacacaacaaca 42342556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 61 - 230
Target Start/End: Complemental strand, 15773344 - 15773182
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgag--agagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatatt 158  Q
    ||||||||||| |||| |||||| ||| ||  ||  ||||||||||||||||||| ||| || ||||| |||||| |||||| |||||||||||||||      
T  15773344 tccacatcgaggttagaacaaccacacaagcaagcaagagacatcacactcttacccaaaactttaaggcaatgagcttatgagtcctcttacttataag 15773245  T
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |         |||||||| |||||| || |||||||||||| ||||||||||||||||||||||||||||||    
T  15773244 a---------tgttcaacttttactcttttattcgatgtgggacatataactcacacttgcacacaacaaca 15773182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 25739433 - 25739593
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| || ||||||| ||  |||||||| |||||||||||| ||| |||| ||  ||||||  |||||||||||||||||||||| |     
T  25739433 tccacatcgaggctagaactaccgcacaagctagagagacgtcacactcttacccaaaacctaaaagcaatgagtttatgggtcctcttacttatatga- 25739531  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
            |||||||| |||||| || ||| |||||||| ||||||||||||||||||||||||||||||    
T  25739532 --------tgttcaacttttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 25739593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 93 - 230
Target Start/End: Original strand, 37990679 - 37990807
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattc 192  Q
    ||||||||| ||||||||||| ||| |||||||| ||||||  ||||| |||||||||||||||         | ||||||||| |||||| || ||| |    
T  37990679 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttata---------aggtgttcaacatttactattttatcc 37990769  T
Q  193 gatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||||||||||||||||||| |||||||||||    
T  37990770 gatgtggaacatataactcacacttgtacacaacaaca 37990807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 43346799 - 43346959
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    ||||||| |||  ||| |||||||||| ||  ||||||||| ||||||||||| ||| |||||||| ||||||  |||||||| ||||||||||||        
T  43346799 tccacatagaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttata---- 43346894  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
         | |||||||||||||||| || |||  ||||||| |||||||||||||||||| |||||||||||    
T  43346895 -----aggtgttcaacctttactattttatctgatgtgggacatataactcacacttgtacacaacaaca 43346959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 220
Target Start/End: Complemental strand, 22304719 - 22304569
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||| ||| |||||||||| ||  ||||||||| ||||||||||| ||| |||||||| |||||   |||||||||||||||||            
T  22304719 tccacatcgagactagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttact-------- 22304628  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
     ||||| || ||||||||||||| || ||| |||||||| ||||||| ||||||||||||    
T  22304627 -tataaggtattcaacctttactattttatccgatgtgggacatatagctcacacttgca 22304569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 228
Target Start/End: Original strand, 45395661 - 45395819
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  |||  ||||| ||| ||||||||||||| ||||||||||| ||| || |||||||||||   |||||| ||||||||||||||        
T  45395661 tccacatcgaggctagagcaaccccacaagtgagagagacaccacactcttacccaaaacattaagacaatgggtttatggatcctcttacttata---- 45395756  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
         | ||||| |||||||||| || |||||||||||| | |||||||| |||||||||||||||||    
T  45395757 -----acgtgtttaacctttactcttttattcgatgtgggatatataacttacacttgcacacaacaa 45395819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 32 - 231
Target Start/End: Complemental strand, 52634856 - 52634665
Alignment:
Q  32 tgttgggtcattggggga--tcaggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagaca 129  Q
    |||||||||| |||||||  || ||||||| || ||||| ||  ||| ||||| |||| ||  |||||||| |||||||||||| ||| |||||||| ||    
T  52634856 tgttgggtcactgggggagctcgggggacagtctacatcaaggctagaacaactgcacaagcaagagagacgtcacactcttacccaaaaccttaaggca 52634757  T
Q  130 atgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaac 229  Q
    |||   |||||||||          | |||||||||| | ||||||||||||||||| ||| |||||||| |||||||||||||||||| ||||||||||    
T  52634756 atgggtttatgggtc----------tcttacttataaggcgttcaacctttactgttttatccgatgtgggacatataactcacacttgtacacaacaac 52634667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 61 - 231
Target Start/End: Complemental strand, 15773004 - 15772843
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    ||||||||||| |||| |||||| ||| ||  ||||||||| ||||||||||  ||| |||||||  ||||||  |||||||||||||||||||||        
T  15773004 tccacatcgaggttagaacaaccacacaagcaagagagacaccacactcttatccaaaaccttaaagcaatgagtttatgggtcctcttacttata---- 15772909  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
         | ||||||||| |||||| || ||| |||| ||| ||||||||||||||||||||||| |||||||    
T  15772908 -----aggtgttcaacatttactcttttatccgatatgggacatataactcacacttgcacacgacaacaa 15772843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 93 - 231
Target Start/End: Original strand, 29644942 - 29645071
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattc 192  Q
    ||||||||  ||||||||||| ||| ||||||||||||||   |||||||||||||||||||||         | ||||| |||||||||| || ||| |    
T  29644942 agagagacgccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttata---------aggtgtttaacctttactcttttatcc 29645032  T
Q  193 gatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    ||||||| |||||||||| ||||||||||||||||||||    
T  29645033 gatgtgggacatataacttacacttgcacacaacaacaa 29645071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 35946585 - 35946515
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||| ||||||||||||||||||| ||| |||||||| |||||||||||||||||| ||||||||    
T  35946585 ttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgtacacaaca 35946515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 63 - 230
Target Start/End: Original strand, 32462910 - 32463069
Alignment:
Q  63 cacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattactt 162  Q
    |||||||||  ||| |||||||||| ||  ||||||||| ||||||||||||||| |||||||| |||||   ||||| ||| |||||||||||          
T  32462910 cacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttactcaaaaccttaaggcaatgggtttatgagtcttcttacttata------ 32463003  T
Q  163 ataaagtgttcaaccttt-actgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
       | || |||||||||| ||| |||||| |||||||| |||||||||||||||||| |||||||||||    
T  32463004 ---aggtattcaaccttttactcttctatccgatgtgggacatataactcacacttgtacacaacaaca 32463069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 31190078 - 31190007
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||| |||||||||||||||| || ||| |||||||| |||||| |||||||||||||||||||||||    
T  31190078 acttataaggtgttcaacctttactcttttatccgatgtgggacatatcactcacacttgcacacaacaaca 31190007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 53118071 - 53118142
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||| |||||||||||||||| || ||| |||| ||||||||||||||||||||||| ||||||||||    
T  53118071 acttataaggtgttcaacctttactcttttatccgatatggaacatataactcacacttgcccacaacaaca 53118142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 54017911 - 54017982
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||||||| |||||||||||||||| || ||| |||||| | ||||||||||||||||||||||||||||    
T  54017911 ttacttataaggtgttcaacctttactcttttatccgatgtaggacatataactcacacttgcacacaacaa 54017982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 61 - 227
Target Start/End: Complemental strand, 9240299 - 9240142
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| | |||||||||| ||||||||||| |||| |||||  | | | ||||||  |||| | ||||||||||||         ||||    
T  9240299 tccacatcgaggctagaataaccgcactattgagagagacaccacattcttatccgaaatcttaaggtaatggatttatgggtcctc---------ttac 9240209  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||| ||||||| | ||||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  9240208 ttataaggtgttcagcttttacttctctatccgatgtggaacatataactcacacttgcacacaaca 9240142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 21832438 - 21832508
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||| |||||||||||||||| |||||| | |||||| |||||||||||||||||||||| ||||    
T  21832438 ttacttataaggtgttcaacctttacttttctatccaatgtgggacatataactcacacttgcacataaca 21832508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 61 - 227
Target Start/End: Original strand, 33803260 - 33803417
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||| ||| || ||| |||||  ||||||||||| ||| |||||||  |||||   ||||||||||||||||||||||       
T  33803260 tccacatcgaggctagaacaaccacacaagagagggagacgccacactcttacccaataccttaatgcaatgggtttatgggtcctcttacttatatg-- 33803357  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
           |||||||||||||||| || ||| |||||||| |||||||||||||| ||||||||||||    
T  33803358 -------gtgttcaacctttactattttatccgatgtgggacatataactcacaattgcacacaaca 33803417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 53577415 - 53577353
Alignment:
Q  169 tgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||||||||||||||||| ||| |||||||  |||||||||||||||||||||||||||||||    
T  53577415 tgttcaacctttactgttttatccgatgtgtgacatataactcacacttgcacacaacaacaa 53577353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 29644676 - 29644749
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||||||||| ||  || |||||||| ||||||||||||||||||||||||| ||||    
T  29644676 ttacttataaggtgttcaacctttactctttaatccgatgtgggacatataactcacacttgcacacaaaaaca 29644749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 61 - 232
Target Start/End: Complemental strand, 32589853 - 32589692
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||| ||| ||  ||||||||||| ||||||||| ||| |||||||| |||||   |||||||||||||||||            
T  32589853 tccacatcgagcctagaacaaccacacaagcaagagagacatcgcactcttacccaaaaccttaaggcaatgggtttatgggtcctcttact-------- 32589762  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaaa 232  Q
     ||||| |||||||||||||| | || |||   |||||| |||||| |||||||||||||||||||||||||    
T  32589761 -tataaggtgttcaacctttattattttatcttatgtgggacatat-actcacacttgcacacaacaacaaa 32589692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 39914311 - 39914240
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaaa 232  Q
    |||||| ||||||||||| ||||||| |||  ||||||  ||||||||||||||||||||||||||||||||    
T  39914311 ttataaggtgttcaacctctactgttttatctgatgtgagacatataactcacacttgcacacaacaacaaa 39914240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 32462653 - 32462727
Alignment:
Q  157 ttacttataaagtgttcaaccttt-actgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| ||||||||||||| ||| ||  ||||||||||| |||||||||||||||||| |||||||||||    
T  32462653 ttacttataaggtgttcaaccttttactctttcattcgatgtgggacatataactcacacttgtacacaacaaca 32462727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 33175759 - 33175829
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||| |||||||||||||||| ||||||  ||||||  |||||||||||||||||| ||||||||    
T  33175759 ttacttataaggtgttcaacctttacttttctatctgatgtgagacatataactcacacttgtacacaaca 33175829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 43346702 - 43346640
Alignment:
Q  168 gtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||||||||| || ||| |||||||| ||||| ||||||||||||||||||||||||    
T  43346702 gtgttcaacctttactattttatccgatgtgggacatacaactcacacttgcacacaacaaca 43346640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 49336782 - 49336856
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||||||||| ||| |||||||||||| |||||| |||||||  |||| ||||||||||||| ||||||||||||    
T  49336782 ttacttataaggtggtcaacctttacttttctatccgatgtgagacatgtaactcacacttgtacacaacaacaa 49336856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 37991072 - 37991145
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||||||||| || ||| | |||||  |||||||||||||||||| |||||||||||    
T  37991072 ttacttataaggtgttcaacctttactattttatccaatgtgagacatataactcacacttgtacacaacaaca 37991145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 42342098 - 42342258
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||||||| ||  ||||||||  ||||||||||| ||| |||||||| ||||||  ||||| ||||||         ||||    
T  42342098 tccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgagtttatgagtcctc---------ttac 42342188  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| |  || ||| |||||| || ||| ||||||||||||||| | |||||||||||||||||||||    
T  42342189 ttataaggcattgaacatttactcttttatccgatgtggaacatatgaatcacacttgcacacaacaaca 42342258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 1634349 - 1634484
Alignment:
Q  88 tagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaaccttt-actgtt 186  Q
    |||||||||||| | | ||||||||| ||| |||||||| |||||   ||||||||||||||||||||| |         ||||| ||||||| | | ||    
T  1634349 tagtgagagagataccgcactcttacccaaaaccttaagccaatgggtttatgggtcctcttacttataat---------gtgtttaaccttttattttt 1634439  T
Q  187 ctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||| |||||||| |||||||||||||||||||||||| ||||||    
T  1634440 ctatccgatgtgggacatataactcacacttgcacacagcaacaa 1634484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 7767413 - 7767476
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacaca 224  Q
    ||||||||||| ||||||||||| |||||| |||||||| |||||||||||| |||| ||||||    
T  7767413 ttataaagtgtccaacctttacttttctatccgatgtgggacatataactcagacttacacaca 7767476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 39934963 - 39935058
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||||||||||  ||| |||||| ||| ||  ||||||||||||||||||||||||| || ||||| |||||   |||||| ||||||||||||||    
T  39934963 tccacatcgaggctagaacaaccacacaagcaagagagacatcacactcttactcaaaactttaaggcaatgggtttatggatcctcttacttata 39935058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 50612547 - 50612610
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||||||| |||||||| ||||||| || ||| |||||||| ||||||||||||||||||||    
T  50612547 ttacttataaggtgttcaatctttactattttatccgatgtgggacatataactcacacttgca 50612610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 8327967 - 8327897
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    ||||||||||  | |||| |||||||| || ||| |||||||| |||||||||||||||||||||||||||    
T  8327967 ttacttataagatattcatcctttactcttttatccgatgtgggacatataactcacacttgcacacaaca 8327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 39336326 - 39336392
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaa 225  Q
    ||||||||||||||||||||  |   |||||| |||||||| |||||||||||||||||||||||||    
T  39336326 acttataaagtgttcaacctccaactttctatccgatgtgggacatataactcacacttgcacacaa 39336392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 25755457 - 25755384
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| || ||||||||||||| || |||  ||||||  |||||||||||||||||| |||||||||||    
T  25755457 ttacttataaggtattcaacctttactcttttatctgatgtgagacatataactcacacttgtacacaacaaca 25755384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 220
Target Start/End: Complemental strand, 39389186 - 39389070
Alignment:
Q  95 agagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattcga 194  Q
    ||||||| ||||||||||| ||| ||||||||||||||   ||||||||||||||| || ||         | |||||||||||||||| || ||| |||    
T  39389186 agagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttagtttta---------aggtgttcaacctttactattttatccga 39389096  T
Q  195 tgtggaacatataactcacacttgca 220  Q
    ||| | ||||||||||||||||||||    
T  39389095 tgtaggacatataactcacacttgca 39389070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 54018293 - 54018366
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||| ||||||| || ||| |||||  | |||||||||||||||||||||| |||||||    
T  54018293 ttacttataaggtgttcaatctttactcttttatccgatgcaggacatataactcacacttgcacataacaaca 54018366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 22304298 - 22304246
Alignment:
Q  168 gtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||||||||||||| || ||| |||||||| ||||||||||||||||||||    
T  22304298 gtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 22304246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 36986045 - 36986101
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacac 215  Q
    |||||||||||  |||||||| ||| ||||||||||||||| |||||||||||||||    
T  36986045 acttataaagttctcaaccttcacttttctattcgatgtgggacatataactcacac 36986101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 37011484 - 37011540
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacac 215  Q
    |||||||||||  |||||||| ||| ||||||||||||||| |||||||||||||||    
T  37011484 acttataaagttctcaaccttcacttttctattcgatgtgggacatataactcacac 37011540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 3135462 - 3135629
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttat--gggtcctcttacttatatt 158  Q
    |||||||||||  ||| |||||||||| ||  | ||||||| ||||||||||   || |||||||| |||||   ||||  ||||||||||||| |||      
T  3135462 tccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttatctaaaaccttaaggcaatgggtttatgggggtcctcttactaata-- 3135559  T
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
      | |||| ||||||||| |||||| || |||  || |||| |||||||||||||||||| |||||||||||    
T  3135560 --taataaggtgttcaacttttactcttttatctgaggtgggacatataactcacacttgtacacaacaaca 3135629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 12747875 - 12747918
Alignment:
Q  185 ttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||| |||||||| ||||||||||||||||||||||||||||    
T  12747875 ttctatccgatgtgggacatataactcacacttgcacacaacaa 12747918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 230
Target Start/End: Original strand, 41359774 - 41359929
Alignment:
Q  62 ccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattact 161  Q
    ||||||||||  ||| |||||| ||| || |||||||||  |||| |||||| ||| |||||||| |||||   ||||||||||||         |||||    
T  41359774 ccacatcgaggctagaacaaccacacaagcgagagagacgccacattcttacccaaaaccttaaggcaatgggtttatgggtcctc---------ttact 41359864  T
Q  162 tataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||| || ||||||||||||| || ||| ||||||||     ||||||||||||||||||||||||||    
T  41359865 tataaggtattcaacctttactattgtatccgatgtgg----gataactcacacttgcacacaacaaca 41359929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 51886612 - 51886561
Alignment:
Q  169 tgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    ||||||||||||||| || |||||||||||  ||||||||||||||||||||    
T  51886612 tgttcaacctttactattttattcgatgtgagacatataactcacacttgca 51886561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 45901777 - 45901703
Alignment:
Q  157 ttacttataaagtgttcaacctttactg-ttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||||||  |  || ||| |||||||| |||||||||||||||||| |||||||||||    
T  45901777 ttacttataaggtgttcaacctttttttcttttatccgatgtgggacatataactcacacttgtacacaacaaca 45901703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 11661598 - 11661525
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||||||  |||| |||| ||||| || ||| |||||||| |||||||||||||||||| ||||| |||||    
T  11661598 ttacttataagatgtttaaccgttactattttatccgatgtgggacatataactcacacttgtacacaccaaca 11661525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 22303670 - 22303759
Alignment:
Q  64 acatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttactt 153  Q
    ||||||||  ||| |||| ||||| ||| ||||| ||| ||||||||||| ||| |||||||| |||||   ||||||||||||||||||    
T  22303670 acatcgaggctagaacaatcgcacaagtaagagaaacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactt 22303759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 3135168 - 3135224
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcac 213  Q
    |||||||||| ||||||||| |||||| || ||| |||||||| |||||||||||||    
T  3135168 ttacttataaggtgttcaacatttactattttatccgatgtgggacatataactcac 3135224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 227
Target Start/End: Original strand, 47964544 - 47964683
Alignment:
Q  79 caaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacct 178  Q
    ||||| ||| ||||||||||||  ||||||||||| ||| |||||||| ||||    ||||||||||||| ||||||||         || |||||||||    
T  47964544 caaccacacaagtgagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctctcacttatat---------agcgttcaacct 47964634  T
Q  179 ttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
      ||  |||||| ||||| || ||||| |||||||||||||||||||||    
T  47964635 ccacatttctatccgatgcgggacatacaactcacacttgcacacaaca 47964683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 47965012 - 47965080
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    ||||||| | |||| |||||  ||| |||||| ||||||  ||||||||||||||||||||||||||||    
T  47965012 acttatataatgtttaacctccacttttctatccgatgtaaaacatataactcacacttgcacacaaca 47965080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 3384364 - 3384427
Alignment:
Q  160 cttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacac 223  Q
    ||||||||||||| ||||| ||||||| |||   |||||| ||||||||||||| |||||||||    
T  3384364 cttataaagtgtttaacctatactgttttatcatatgtgggacatataactcacgcttgcacac 3384427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 156
Target Start/End: Original strand, 22303955 - 22304058
Alignment:
Q  53 ggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttact 152  Q
    ||||||| |||||||||||  ||| |||||| | | ||  ||||||||| ||||||||||  ||| |||||||| |||||   |||||||||| ||||||    
T  22303955 ggggacaatccacatcgaggctagaacaaccactcaagcaagagagacaccacactcttatccaaaaccttaaggcaatgggtttatgggtccgcttact 22304054  T
Q  153 tata 156  Q
    ||||    
T  22304055 tata 22304058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 22304061 - 22304116
Alignment:
Q  175 acctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||||| || |||  ||||||| |||||||||||||||||| |||||||||||    
T  22304061 acctttactattttatctgatgtgggacatataactcacacttgtacacaacaaca 22304116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 220
Target Start/End: Complemental strand, 37726567 - 37726504
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||||||| || |||||| |||||| || ||| |||||||  ||||||||||||||||||||    
T  37726567 ttacttataaggtattcaacatttactattttatccgatgtgagacatataactcacacttgca 37726504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 37990985 - 37991080
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||||||||||  ||| |||||| ||  ||  ||||||||| ||||||||||| ||| |||||||| | ||||  |||| ||||||||||||||||    
T  37990985 tccacatcgaggctagaacaaccacataagcaagagagacaccacactcttacccaaaaccttaaggcgatgagtttataggtcctcttacttata 37991080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 44160643 - 44160710
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||| |||||||||||||| |||| ||| | || || ||||||||||| ||||||||| |||||||    
T  44160643 ttataaggtgttcaacctttattgttttatccaatatgaaacatataactgacacttgcatacaacaa 44160710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 46546422 - 46546490
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    ||||||||||||||||||||  ||  ||| || | |||| | ||||||||||||||||| |||||||||    
T  46546422 acttataaagtgttcaacctccacatttcaatccaatgtaggacatataactcacacttacacacaaca 46546490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 54451277 - 54451341
Alignment:
Q  163 ataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    ||||||||||||||||  | | |||| || ||||||| ||||||||||||||  |||||||||||    
T  54451277 ataaagtgttcaacctccatttttctttttgatgtgggacatataactcacatatgcacacaaca 54451341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 4e-29; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 1085624 - 1085784
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||| ||| ||| ||||||||  ||||||||||| ||| |||||||| |||||   ||||||||||||||||             
T  1085624 tccacatcgaggctagaacaaccacacaagtaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttac--------- 1085714  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||||||||||||||||||| || ||| |||||||| ||||||||||||||||||||||||||||||    
T  1085715 ttataaagtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 1085784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 62 - 230
Target Start/End: Complemental strand, 7517729 - 7517570
Alignment:
Q  62 ccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattact 161  Q
    ||||||||||  ||| |||||| ||| ||||||| ||||| ||||||||||| ||| |||||||| |||||   |||||||||||||||||||||         
T  7517729 ccacatcgaggctagaacaaccacacaagtgagacagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata----- 7517635  T
Q  162 tataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
        | |||||||||||||||| || ||| |||||||| ||||||||||||||||||||||||||||||    
T  7517634 ----aggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgcacacaacaaca 7517570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 93 - 230
Target Start/End: Complemental strand, 30245195 - 30245067
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattc 192  Q
    ||||||||| ||||||||||| ||| |||||||| ||||||  ||||||||| |||||||||||         | |||||||||||||||| || ||| |    
T  30245195 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcgtcttacttata---------aggtgttcaacctttactcttttatcc 30245105  T
Q  193 gatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||||||||||||||||||| |||||||||||    
T  30245104 gatgtggaacatataactcacacttgtacacaacaaca 30245067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 43241558 - 43241484
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||||||||| |||||||||||||| | || ||| ||||||||||||||||||||||||||||||||||||||||    
T  43241558 ttacttataaggtgttcaacctttatttttttatccgatgtggaacatataactcacacttgcacacaacaacaa 43241484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 23472 - 23545
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||||||||    
T  23472 ttacttataaggtgttcaacctttactattgtatccgatgtggaacatataactcacaattgcacacaacaaca 23545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 7554088 - 7554015
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||||||||| || ||| |||||||| ||||||||||||||||||||||||||||||    
T  7554088 ttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 7554015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 61 - 230
Target Start/End: Complemental strand, 30244420 - 30244260
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  | | |||||| ||| ||||||||||||| ||||||||||| ||| |||||||| |||||   ||||| |||||||||||||||        
T  30244420 tccacatcgaggcttgaacaaccacacaagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttata---- 30244325  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
         | || ||||||||||||| || ||| |||||||| |||||||||||||||||| |||||||||||    
T  30244324 -----aggtcttcaacctttactcttttatccgatgtgggacatataactcacacttgtacacaacaaca 30244260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 62 - 231
Target Start/End: Original strand, 40094783 - 40094943
Alignment:
Q  62 ccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattact 161  Q
    ||||||||||  ||| |||||| ||| ||  ||||||||  ||||||||||| ||| |||||||||| |||   |||||||||||||||||||||         
T  40094783 ccacatcgaggctagaacaacctcacaagcaagagagacgccacactcttacccaaaaccttaagacgatgggtttatgggtcctcttacttata----- 40094877  T
Q  162 tataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
        | ||||| |||||||||| || |||||||||||  |||||||||||||||||||||||||||||||    
T  40094878 ----aggtgttgaacctttactcttttattcgatgtgagacatataactcacacttgcacacaacaacaa 40094943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 217
Target Start/End: Original strand, 37533372 - 37533519
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||||||| ||  | ||||||| ||||||||||| ||| |||||||| ||||| | ||||||||||||         ||||    
T  37533372 tccacatcgaggctagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtcctc---------ttac 37533462  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacactt 217  Q
    |||||| |||||||||||||||| || ||||| |||| |||||||||||||||||||    
T  37533463 ttataaggtgttcaacctttactattttattcaatgtagaacatataactcacactt 37533519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 63 - 230
Target Start/End: Complemental strand, 45434784 - 45434626
Alignment:
Q  63 cacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattactt 162  Q
    |||||||||  ||| |||||  ||| ||| ||||||||||||||||||||| ||| |||||||| || | |  |||||||||||||||||||||          
T  45434784 cacatcgaggctagaacaactccacaagtaagagagacatcacactcttacccaaaaccttaaggcagtaagtttatgggtcctcttacttata------ 45434691  T
Q  163 ataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
       | |||||||||||||||| || ||| |||||||| |||||||||| ||||||| |||||||||||    
T  45434690 ---aggtgttcaacctttacttttttatccgatgtgggacatataacttacacttgtacacaacaaca 45434626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 16569259 - 16569186
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| || |||||||||||||||||||| |||||||  |||||||||||||||||||| |||||||||    
T  16569259 ttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcacacttgcatacaacaaca 16569186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 16596403 - 16596476
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| || |||||||||||||||||||| |||||||  |||||||||||||||||||| |||||||||    
T  16596403 ttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcacacttgcatacaacaaca 16596476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 30245557 - 30245484
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||||||||| || |||  ||||||| ||||||||||||||||||||||||||||||    
T  30245557 ttacttataaggtgttcaacctttactcttttatctgatgtgggacatataactcacacttgcacacaacaaca 30245484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 30255402 - 30255329
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||||||||| || ||| |||||||| ||||||||| ||||||||||||||||||||    
T  30255402 ttacttataaggtgttcaacctttactcttttatccgatgtgggacatataacgcacacttgcacacaacaaca 30255329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 45433304 - 45433231
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||||||||| || ||| ||||||||| ||||||||||||||||| |||||||||||    
T  45433304 ttacttataaggtgttcaacctttactcttttatccgatgtggatcatataactcacacttgtacacaacaaca 45433231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 55 - 230
Target Start/End: Complemental strand, 9901799 - 9901635
Alignment:
Q  55 ggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttactta 154  Q
    ||||| |||||| ||||  ||| |||||||||||||  ||||||||| ||||||||||| ||| |||||||||||||||  |||||| |||||           
T  9901799 ggacagtccacaccgaggctagaacaaccgcactagcaagagagacaccacactcttacccaaaaccttaagacaatgagtttatggatcctc------- 9901707  T
Q  155 tattacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
       ||| |||||  |||||||||||||||||| ||| |||||||| |||||||||||||||||  |||||| ||||    
T  9901706 ---tacgtataagatgttcaacctttactgttttatccgatgtgg-acatataactcacacttatacacaataaca 9901635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 32 - 213
Target Start/End: Complemental strand, 11845372 - 11845198
Alignment:
Q  32 tgttgggtcattgggggatca--ggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagaca 129  Q
    |||||||||| ||||||| ||  ||||||  || ||||||||  ||| ||||| |||| ||  ||||||||| ||||||||||  ||| |||||||| ||    
T  11845372 tgttgggtcactgggggagcacgggggaccgtctacatcgaggctagaacaactgcacaagcaagagagacaccacactcttatccaaaaccttaaggca 11845273  T
Q  130 atgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcac 213  Q
    ||| | |||||||||||||||||||||         | |||||||||||||||| || ||| ||||||||||||||||||||||    
T  11845272 atggatttatgggtcctcttacttata---------aggtgttcaacctttactattttatccgatgtggaacatataactcac 11845198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 220
Target Start/End: Original strand, 37533019 - 37533168
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    ||||||||||| |||| |||| ||||| ||  ||||||||| |||||| |||| ||| |||||||| ||||||  ||||||||||||         ||||    
T  37533019 tccacatcgaggttagaacaagcgcacaagcaagagagacaccacact-ttacccaaaaccttaaggcaatgagtttatgggtcctc---------ttac 37533108  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||| |||||||||||||||| || ||| | |||||| ||||||||||||||||||||    
T  37533109 ttataaggtgttcaacctttactattttatccaatgtgggacatataactcacacttgca 37533168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 118396 - 118469
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||| | |||||||||||||||| ||||||  ||||||| |||||||||| |||||||||||||||||||    
T  118396 ttacttattaggtgttcaacctttacttttctatctgatgtgggacatataacttacacttgcacacaacaaca 118469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 22566757 - 22566830
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||||||||| || ||| |||||||| |||||| ||||||||||||| |||||||||    
T  22566757 ttacttataaggtgttcaacctttactcttttatccgatgtgggacatattactcacacttgcatacaacaaca 22566830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 93 - 230
Target Start/End: Original strand, 22567079 - 22567206
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattc 192  Q
    ||||||||| |||||||||||  || |||||||| ||||||  |||||||||||||||||||||         | |||||||||||||||| || ||| |    
T  22567079 agagagacaccacactcttaccaaaaaccttaaggcaatgagtttatgggtcctcttacttata---------aggtgttcaacctttactcttttatcc 22567169  T
Q  193 gatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||| |||||| ||||||||||||| |||||||||    
T  22567170 gatgtgg-acatattactcacacttgcatacaacaaca 22567206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 24177498 - 24177425
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| ||||||| |||||||| || ||| |||||||| |||||||||||| |||||||||||||||||    
T  24177498 ttacttataaggtgttcagcctttactcttttatccgatgtgggacatataactcatacttgcacacaacaaca 24177425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 30244760 - 30244691
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| |||||||||||||||| || ||| | |||||| ||||||||||||||||||||||||||||||    
T  30244760 ttataaggtgttcaacctttactcttttatccaatgtgggacatataactcacacttgcacacaacaaca 30244691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 36109012 - 36109084
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaac 229  Q
    |||||||||| |||||||||||||||| || ||| |||||||  | |||||||||||||||||||||||||||    
T  36109012 ttacttataaggtgttcaacctttactcttttatccgatgtgagaaatataactcacacttgcacacaacaac 36109084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 36623022 - 36622950
Alignment:
Q  158 tacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||| |||||||||| || ||| |||||||| ||||||||||||||||||||||||| ||||    
T  36623022 tacttataaaatgtttaacctttactattttatccgatgtgggacatataactcacacttgcacacaataaca 36622950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 36939741 - 36939900
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||||||  ||  ||||| ||| |||||| |||| ||| |||||||| ||||| | |||||||||||||||||||||        
T  36939741 tccacatcgaggctagaacaaccgcataagcaagagaaacaccacacttttacccaaaaccttaaggcaatggatttatgggtcctcttacttata---- 36939836  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaac 229  Q
         | ||||||||| |||||| || ||| |||| ||| |||||||||||||||||||||| ||||||    
T  36939837 -----aggtgttcaacttttactattttatacgatttgggacatataactcacacttgcacagaacaac 36939900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 93 - 220
Target Start/End: Complemental strand, 29157683 - 29157565
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattc 192  Q
    ||||||||| ||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||         | |||||||||||||||| || ||| |    
T  29157683 agagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtcgtcttacttata---------aggtgttcaacctttactattttatcc 29157593  T
Q  193 gatgtggaacatataactcacacttgca 220  Q
    | ||||| ||||||||||||||||||||    
T  29157592 ggtgtgggacatataactcacacttgca 29157565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 8128536 - 8128606
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||| ||||| |||||||||||||| | |||||| |||| ||| |||||||||||||||||||||||||||    
T  8128536 ttacatataaggtgttcaacctttatttttctatccgatatgggacatataactcacacttgcacacaaca 8128606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 24838797 - 24838871
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||||||||| |||||||||||||||| || |||||||||||  |||||||||| ||||||  ||||||||||||    
T  24838797 ttacttataaggtgttcaacctttactcttttattcgatgtgagacatataacttacacttatacacaacaacaa 24838871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 28301638 - 28301708
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||| ||||||| | |||||| |||||| |||||||  |||||||||||||||||||||||||||    
T  28301638 ttacttataaggtgttcagcttttacttttctatccgatgtgagacatataactcacacttgcacacaaca 28301708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 36534879 - 36534953
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||||||||| ||||||||||| ||||||| ||| ||| |||| |||||||| | ||||||||||||||||||||    
T  36534879 ttacttataaggtgttcaacctctactgttttatccgaggtgggacatataagttacacttgcacacaacaacaa 36534953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 45754778 - 45754705
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||||||||| ||||||||| |||||| || ||| ||||||||| ||||||||||||||||| ||||||||||||    
T  45754778 ttacttataaggtgttcaacatttactattttatccgatgtgga-catataactcacacttgtacacaacaacaa 45754705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 41910693 - 41910762
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| || ||||||||||||| || ||| |||||||| ||||||||||||||||| ||||||||||||    
T  41910693 ttataaggtattcaacctttactcttttatccgatgtgggacatataactcacacttacacacaacaaca 41910762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 40230386 - 40230454
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaa 225  Q
    ||||||||||  |||||||| |||||| || |||||||||||| |||||||||| ||||||||||||||    
T  40230386 ttacttataagatgttcaacttttacttttttattcgatgtgggacatataacttacacttgcacacaa 40230454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 231
Target Start/End: Original strand, 34218073 - 34218203
Alignment:
Q  92 gagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctatt 191  Q
    |||||||||| ||||||||||| ||| ||||||||||||||   ||||| ||||||| |||||||         | ||||||||| |||||| || |||     
T  34218073 gagagagacaccacactcttacccaaaaccttaagacaatgggtttatgagtcctctcacttata---------aggtgttcaacatttacttttttatc 34218163  T
Q  192 cgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||||||  |||||||||||||| ||| ||||||||||||    
T  34218164 cgatgtgagacatataactcacatttgtacacaacaacaa 34218203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 156
Target Start/End: Complemental strand, 19122879 - 19122786
Alignment:
Q  63 cacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||||||||| ||| |||||| ||| ||  ||| ||||| ||||||||||| ||| |||||||| ||||| | ||||| |||||||||||||||    
T  19122879 cacatcgagactagaacaaccacacaagcaagatagacaccacactcttacccaaaaccttaaggcaatggatttatgagtcctcttacttata 19122786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 30032630 - 30032557
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||  ||||| || |||||||||||| ||||||||||||||| || || ||||||||    
T  30032630 ttacttataaggtgttcaacacttactcttttattcgatgtgggacatataactcacacatgtacgcaacaaca 30032557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 30253610 - 30253547
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    ||||||||| ||||||||||| ||| |||||||| ||||||  |||||||| ||||||||||||    
T  30253610 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttata 30253547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 152
Target Start/End: Complemental strand, 37167931 - 37167840
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttact 152  Q
    |||||||||||  ||| |||||||||| ||  ||||||||| ||||||||||| ||| || ||||| ||||| | |||||| ||||||||||    
T  37167931 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaactttaagtcaatggatttatggatcctcttact 37167840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 230
Target Start/End: Complemental strand, 47129228 - 47129085
Alignment:
Q  78 acaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacc 177  Q
    |||||| |||| |||||||||||| ||||||| ||| ||| |||||||  | |||   |||||||||||||||||||||        | || ||||||||    
T  47129228 acaaccacacttgtgagagagacaccacactcctacccaaaaccttaaagcgatgggtttatgggtcctcttacttata--------agag-gttcaacc 47129138  T
Q  178 tttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| || ||| |||||||  ||||||||||||||||||  ||||||||||    
T  47129137 tttactattttatccgatgtgagacatataactcacacttgtgcacaacaaca 47129085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 6054677 - 6054615
Alignment:
Q  94 gagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||||||| ||||||||||| ||| |||||||| |||||   |||||||||||||||||||||    
T  6054677 gagagacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttata 6054615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 220
Target Start/End: Complemental strand, 14681627 - 14681510
Alignment:
Q  94 gagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattcg 193  Q
    |||||||| ||||||||||| ||| ||||||||||||||   ||||||| |||||||         |||| || |||||||||||||||| || |||  |    
T  14681627 gagagacaccacactcttacccaaaaccttaagacaatgggtttatgggccctctta---------cttacaaggtgttcaacctttactattttatctg 14681537  T
Q  194 atgtggaacatataactcacacttgca 220  Q
    |||||| |||||||||| |||||||||    
T  14681536 atgtgggacatataacttacacttgca 14681510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 41854694 - 41854625
Alignment:
Q  160 cttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||| |||||||||||||||| || || | ||||||| |||||||||||| |||||||||||| ||||    
T  41854694 cttataaggtgttcaacctttactcttttact-gatgtgggacatataactcatacttgcacacaaaaaca 41854625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 40094502 - 40094559
Alignment:
Q  170 gttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||||||| || |||  ||||| | |||||||||||||||||||||||||||    
T  40094502 gttcaacctttactcttttatctgatgttggacatataactcacacttgcacacaaca 40094559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 36967333 - 36967397
Alignment:
Q  166 aagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||| || ||||||| || ||| |||||||  |||||||||||||||||| |||||||||||    
T  36967333 aagtgtttaatctttacttttttatccgatgtgagacatataactcacacttgtacacaacaaca 36967397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 155
Target Start/End: Original strand, 1085288 - 1085350
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttat 155  Q
    ||||| ||| ||||||||||| ||| |||||||| ||||||  |||||||| |||||||||||    
T  1085288 agagaaacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttat 1085350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 20599373 - 20599303
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||||||||||| | |||||||| || ||| |||| ||| |||||||||||||||||  | ||||||||||    
T  20599373 ttataaagtgtttatcctttacttttttatccgatatgggacatataactcacacttatagacaacaacaa 20599303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 10341893 - 10341829
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacac 223  Q
    ||||||||||||||||||||  ||| |||||| |||||||  |||||||||| | | ||||||||    
T  10341893 acttataaagtgttcaacctccacttttctatccgatgtgagacatataacttatatttgcacac 10341829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 223
Target Start/End: Complemental strand, 37345594 - 37345558
Alignment:
Q  187 ctattcgatgtggaacatataactcacacttgcacac 223  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  37345594 ctattcgatgtgggacatataactcactcttgcacac 37345558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 41910594 - 41910646
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttac 113  Q
    ||||||||||| |||| |||||| |||| |||||||| ||| |||||||||||    
T  41910594 tccacatcgaggttagaacaaccacacttgtgagagaaacaccacactcttac 41910646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 5420 - 5349
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5420 ttacttataaggtgttcaacctttactgttctatccgatgtggaacatataactcacacttgcacacaacaa 5349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 231
Target Start/End: Complemental strand, 5132 - 4971
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  |||  ||||||||  || |||||||||| ||||||||||| ||| ||| |||| ||||||  |||||||||          | ||||    
T  5132 tccacatcgaggctagagcaaccgcataagcgagagagacaccacactcttacccaaaaccataaggcaatgagtttatgggtc---------tttttac 5042  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    ||||||  | || ||||||||||||||| | |||||||  |||||||| ||||||||||||||||||||||    
T  5041 ttataagatattaaacctttactgttctctccgatgtgagacatataattcacacttgcacacaacaacaa 4971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 61 - 227
Target Start/End: Original strand, 24600322 - 24600479
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| ||||||  ||||| |||||||||| ||||||||||| ||| |||||||||||||||  ||||| || |||||||||||| ||     
T  24600322 tccacatcgaggctagaacaaccatactagcgagagagacaccacactcttacacaaaaccttaagacaatgagtttatgagttctcttacttataata- 24600420  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
            ||||||||||||||| |||||| |||| ||| |||||||||||||||||||||||||||    
T  24600421 --------tgttcaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 24600479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 31767256 - 31767333
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaaaat 234  Q
    |||||||||| ||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||    
T  31767256 ttacttataaggtgttcaacctttactgttttatccgatgtggaacatataacccacacttgcacacaacaacaaaat 31767333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 93 - 230
Target Start/End: Original strand, 39066240 - 39066368
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattc 192  Q
    ||||||||| ||||||||||  ||| |||||||||||||||  ||||||||| ||||| |||||         | |||||||||||||||| |||||| |    
T  39066240 agagagacaccacactcttatccaaaaccttaagacaatgattttatgggtcatcttagttata---------aggtgttcaacctttacttttctatcc 39066330  T
Q  193 gatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  39066331 gatgtggaatatataactcacacttgcacacaacaaca 39066368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 92 - 228
Target Start/End: Complemental strand, 17294696 - 17294569
Alignment:
Q  92 gagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctatt 191  Q
    |||||||||| ||||||||||| ||| |||||||| |||||   |||||||||||||||||||||         |||||||||||||||||| || |||     
T  17294696 gagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata---------aagtgttcaacctttactcttttatc 17294606  T
Q  192 cgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||||| |||||||||||||||||| |||||||||    
T  17294605 cgatgtgggacatataactcacacttgtacacaacaa 17294569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 66567 - 66638
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||||||| |||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||    
T  66567 ttacttataaggtgttcaacctttacttttctatccgatatggaacatataactcacacttgcacacaacaa 66638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 41184520 - 41184594
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    ||||||||||||||||||||||||||| || ||| |||||||  |||||||||||||||||||||||||||||||    
T  41184520 ttacttataaagtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaacaacaa 41184594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 78 - 227
Target Start/End: Original strand, 22077520 - 22077660
Alignment:
Q  78 acaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacc 177  Q
    |||||||||  ||||||||||||  ||||||||||| ||| |||||||| | | ||  |||||||||||||||||||||         | ||||||||||    
T  22077520 acaaccgcataagtgagagagacgccacactcttacccaaaaccttaaggctacgagtttatgggtcctcttacttata---------aggtgttcaacc 22077610  T
Q  178 tttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||| |||||| |||||||  |||||||||||||||||||||||||||    
T  22077611 tttacttttctatccgatgtgagacatataactcacacttgcacacaaca 22077660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 32 - 230
Target Start/End: Complemental strand, 34364688 - 34364497
Alignment:
Q  32 tgttgggtcattggggga--tcaggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagaca 129  Q
    |||||||||| |||||||  |||||| ||  |||||||||||  |||  ||||||||  || |||||||||||||||||||||| ||| |||||||| |     
T  34364688 tgttgggtcactgggggagctcagggaaccatccacatcgaggctagagcaaccgcataagcgagagagacatcacactcttacccaaaaccttaaggct 34364589  T
Q  130 atgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaac 229  Q
    |||   ||| || ||||||||||||||         | |||||||||||||||| || ||| |||||||  |||||||||||||||||||||||||||||    
T  34364588 atgggtttacggatcctcttacttata---------aggtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaacaac 34364498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 37850695 - 37850768
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| ||||||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  37850695 ttacttataaggtgttcaacctctactgttttatgcgatgtgggacatataactcacacttgcacacaacaaca 37850768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 41142435 - 41142362
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| ||||||||||||||||||| ||| |||||||| |||||||||||||||||||||| |||||||    
T  41142435 ttacttataaggtgttcaacctttactgttttatccgatgtgggacatataactcacacttgcacagaacaaca 41142362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 230
Target Start/End: Original strand, 26661547 - 26661690
Alignment:
Q  78 acaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacc 177  Q
    |||||| ||| || |||||||||| ||||||||||| ||| |||||||| ||||||  ||||||||||||| |||||||         | ||||||||||    
T  26661547 acaaccacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctctcacttata---------aggtgttcaacc 26661637  T
Q  178 tttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| || ||  |||||||| |||||||||||||||||| |||||||||||    
T  26661638 tttactcttttacccgatgtgggacatataactcacacttgtacacaacaaca 26661690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 5320062 - 5320131
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||||| ||||||||| |||||| |||||| ||||||||||||||||||||||||||||| |||||||    
T  5320062 acttataaggtgttcaacttttacttttctatccgatgtggaacatataactcacacttgcatacaacaa 5320131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 230
Target Start/End: Complemental strand, 34365075 - 34364915
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    ||||||||||| ||||  |||| |||  || |||||||||| ||||||||||| ||| |||||||| | |||   |||||||||||||||||||||        
T  34365075 tccacatcgaggttagagcaactgcataagcgagagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttata---- 34364980  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
         | |||||||||||||| | || ||| |||||||  ||||||||||||||||||||||||||||||    
T  34364979 -----aggtgttcaacctttattattttatccgatgtgtgacatataactcacacttgcacacaacaaca 34364915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 32594747 - 32594874
Alignment:
Q  84 gcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttact 183  Q
    |||| ||| ||||||||| ||||||||||| ||| |||||||||||||||  ||||||||||||         |||||||||| ||||||||||||||||    
T  32594747 gcacaagtaagagagacaccacactcttacccaaaaccttaagacaatgagtttatgggtcctc---------ttacttataaggtgttcaacctttact 32594837  T
Q  184 gttctattcgatgtggaacatataactcacacttgca 220  Q
     || |||  ||||| | ||||||||||||||||||||    
T  32594838 attttatctgatgtaggacatataactcacacttgca 32594874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 21378136 - 21378211
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaaa 232  Q
    ||||||||||  | |||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||    
T  21378136 ttacttataagatattcaacctttactgttctatccgatctgggacatataactgacacttgcacacaacaacaaa 21378211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 45084445 - 45084378
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacaca 224  Q
    |||||||||| ||||||||||||||||||| ||| |||||||| | ||||||||||||||||||||||    
T  45084445 ttacttataaggtgttcaacctttactgttttatccgatgtgggagatataactcacacttgcacaca 45084378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 220
Target Start/End: Original strand, 48588496 - 48588646
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||||||| ||| ||||||||| | ||||||||| ||| |||||||| ||||||| ||| ||||| ||         ||||    
T  48588496 tccacatcgaggctagaacaaccgcacaagtaagagagacaccgcactcttacccaaaaccttaaggcaatgaatttacgggtcttc---------ttac 48588586  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||| |||||||||||||||| || ||| |||||| | ||||| ||||||||||||||    
T  48588587 ttataaggtgttcaacctttactattttatccgatgtcggacatagaactcacacttgca 48588646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 62 - 228
Target Start/End: Complemental strand, 41157524 - 41157367
Alignment:
Q  62 ccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattact 161  Q
    ||||||||||  ||| |||||| ||| ||  ||| ||||| ||||||||||||||| |||| ||| |||||   |||||||||||||||||||||         
T  41157524 ccacatcgaggctagaacaaccacacaagcaagacagacaccacactcttactcaaaacctaaaggcaatgggtttatgggtcctcttacttata----- 41157430  T
Q  162 tataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
        | ||||||||| |||||| || |||  ||||||| ||||||||||||||||||||||||||||    
T  41157429 ----aggtgttcaacttttactcttttatctgatgtgggacatataactcacacttgcacacaacaa 41157367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 22793339 - 22793270
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    ||||||||||| |||||||| |||| |||||| |||||||| ||||||||||||||||||| ||||||||    
T  22793339 acttataaagttttcaacctctacttttctatacgatgtgggacatataactcacacttgctcacaacaa 22793270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 231
Target Start/End: Complemental strand, 41157140 - 41156980
Alignment:
Q  62 ccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattact 161  Q
    ||||||||||  ||| |||||| ||| ||  | ||||||| ||||||||||| ||| |||||||  ||||||  |||||||||||||||||||||         
T  41157140 ccacatcgaggctagaacaaccacacaagcaatagagacaccacactcttacccaaaaccttaaagcaatgagtttatgggtcctcttacttata----- 41157046  T
Q  162 tataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
        | |||||||||||||||| || ||| || | ||| |||||||| ||||||||||||||||||||||    
T  41157045 ----aggtgttcaacctttactcttttatccgttatgggacatataattcacacttgcacacaacaacaa 41156980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 233
Target Start/End: Complemental strand, 29798262 - 29798186
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaaaa 233  Q
    |||||||||| |||||||||||||||| || ||| | |||| | |||||||||||||||||||| ||||||||||||    
T  29798262 ttacttataaggtgttcaacctttactattttatccaatgtaggacatataactcacacttgcatacaacaacaaaa 29798186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 229
Target Start/End: Complemental strand, 40082556 - 40082398
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||| ||||| ||  ||||||| | ||||||||||| ||| |||||||| ||||||| |||| | |||||         ||||    
T  40082556 tccacatcgaggctagaacaaacgcacaagcaagagagataccacactcttacccaaaaccttaaggcaatgaatttat-gatcctc---------ttac 40082467  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaac 229  Q
    |||||| |||||||||||||||| || ||| |||||| | ||||||||||||||||||| |||||||||    
T  40082466 ttataaggtgttcaacctttactattttatccgatgtaggacatataactcacacttgcgcacaacaac 40082398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 220
Target Start/End: Original strand, 44290434 - 44290616
Alignment:
Q  31 ttgttgggtcattggggga--tcaggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagac 128  Q
    ||||||||||| |||||||  || ||||||  |||||||||||  ||| ||||||| || ||  ||| ||||| || |||||||| ||| |||||||| |    
T  44290434 ttgttgggtcactgggggagctcgggggaccgtccacatcgaggctagaacaaccgtacaagcaagaaagacaccatactcttacccaaaaccttaaggc 44290533  T
Q  129 aatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    ||||   |||||||||||||||||||||  |         ||||||||||||||| || ||| |||||||| ||||||||||||||||||||    
T  44290534 aatgggtttatgggtcctcttacttataaga---------tgttcaacctttactattttatccgatgtgggacatataactcacacttgca 44290616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 220
Target Start/End: Original strand, 44290832 - 44290983
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactctt-actcaacaccttaagacaatgaacttatgggtcctcttacttatatta 159  Q
    |||||||||||  ||| |||||||||| ||  ||||| ||| ||||||||| || ||| |||||||| |||||   |||||||||||||||||||||       
T  44290832 tccacatcgaggctagaacaaccgcacaagcaagagatacaccacactctttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata--- 44290928  T
Q  160 cttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
          | |||||||||||||||| || ||| |||||||| ||||||||||||||||||||    
T  44290929 ------aggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 44290983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 3537242 - 3537305
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||||||| |||||||||||||||| || ||| |||||||| ||||||||||||||||||||    
T  3537242 ttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 3537305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 34649499 - 34649428
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||| |||||||||||||||| || ||| |||||||| |||||||||||||||||| | |||||||||    
T  34649499 acttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtatacaacaaca 34649428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 38804450 - 38804521
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||||||| |||||||||||||||| || |||||||||||| || ||||||||||||||| | |||||||    
T  38804450 ttacttataatgtgttcaacctttactcttttattcgatgtgggacgtataactcacacttgtaaacaacaa 38804521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 61 - 230
Target Start/End: Complemental strand, 11977430 - 11977270
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| ||||||||||| |  ||||||||||||||||||||| ||| |||||||| || |    ||||| || |||         ||||    
T  11977430 tccacatcgaggctagaacaaccgcacttgcaagagagacatcacactcttacccaaaaccttaaggcattaggtttatgagtgctc---------ttac 11977340  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| ||||||||| ||||||||| ||  |||||||| |||||||||||||||||| ||||| |||||    
T  11977339 ttataaggtgttcaacatttactgttttacccgatgtgggacatataactcacacttgtacacagcaaca 11977270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 1188685 - 1188753
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    ||||||||| | ||||||||  ||| |||||| |||| |||||||||||||||||||||||||||||||    
T  1188685 acttataaaatattcaacctccacttttctatccgatatggaacatataactcacacttgcacacaaca 1188753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 4878864 - 4878796
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    ||||||||| ||||||| ||| ||| || ||| ||||||||||||||||||||||| ||||||||||||    
T  4878864 acttataaaatgttcaagcttcactattttatccgatgtggaacatataactcacaattgcacacaaca 4878796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 228
Target Start/End: Original strand, 3875339 - 3875497
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||| ||||||||||||||||  |||| ||||||  || |||||||| |||||   ||||| ||||||         ||||    
T  3875339 tccacatcgaggctagaacaaccacactagtgagagagactccacattcttacctaaaaccttaaggcaatgggtttatgagtcctc---------ttac 3875429  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||| |||| ||||||||||| || ||| |||||||  |||||||||| || ||||||||||||||    
T  3875430 ttataaggtgtacaacctttacttttttatccgatgtgtgacatataactgactcttgcacacaacaa 3875497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 14319017 - 14318875
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    ||||||| |||  ||| |||||||||| | | ||||||||| ||||||||||| ||| |||||||| ||||  | ||||||||| |||||||||||        
T  14319017 tccacattgaggctagaacaaccgcacaaataagagagacaccacactcttacccaaaaccttaaggcaatagatttatgggtcttcttacttata---- 14318922  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactca 212  Q
         | |||||||||||||||| || ||| ||| |||||||||||||||||    
T  14318921 -----aggtgttcaacctttactattttatccgacgtggaacatataactca 14318875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 44685520 - 44685449
Alignment:
Q  157 ttacttataaagtgttcaa-cctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||| || ||||| |||||||| |||||| |||| ||| |||||||||||||||||||||||||||    
T  44685520 ttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 44685449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 50469166 - 50469246
Alignment:
Q  145 ctcttacttatattacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||||| |  ||||||||||||||||||||||| |  |||  ||||| | |||||||||||||||||||||||||||    
T  50469166 ctcttacttataat--ttataaagtgttcaacctttactttattatctgatgtaggacatataactcacacttgcacacaaca 50469246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 3550783 - 3550721
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgc 219  Q
    |||||||||| |||||||||||||||| || |||  ||||||| |||||||||||||||||||    
T  3550783 ttacttataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttgc 3550721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 24132084 - 24132150
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||| |||||||||||||||| |||||| ||||| || |||||||||||||| ||||| ||||||    
T  24132084 ttataaggtgttcaacctttacttttctatccgatgagggacatataactcacagttgcatacaaca 24132150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 235
Target Start/End: Original strand, 35154150 - 35154212
Alignment:
Q  173 caacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaaaatt 235  Q
    ||||||||||| || |||  ||||||| |||||||||||||||||||||||||||||| ||||    
T  35154150 caacctttactcttttatctgatgtgggacatataactcacacttgcacacaacaacataatt 35154212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 37556175 - 37556101
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttct-attcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||||||  ||||||||||||||| || | || |||||||| |||||||||||||||||| |||||||||||    
T  37556175 ttacttataagatgttcaacctttactatttttatccgatgtgggacatataactcacacttgtacacaacaaca 37556101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 215
Target Start/End: Original strand, 3537597 - 3537752
Alignment:
Q  51 caggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctctta 150  Q
    ||||||||  |||||||||||  ||| |||||||||| ||  ||||||||  ||||||||||| ||| |||||||| |||||   |||| |||||||       
T  3537597 caggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaagccaatgggtttataggtcctc--- 3537693  T
Q  151 cttatattacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacac 215  Q
          ||||| |||| |||||||||||||||| || ||| |||||||| |||||||||| ||||    
T  3537694 ------ttactcataaggtgttcaacctttactattttatccgatgtgggacatataactaacac 3537752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 5575167 - 5575098
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||||||| |||||||||||||||| |||||| ||| |||| |||||||| |||||  ||||||||||||    
T  5575167 ttacttataaggtgttcaacctttactcttctatccgacgtgggacatataattcaca--tgcacacaacaa 5575098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 22077923 - 22077991
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaa 225  Q
    ||||||||||  ||||||||||||| | |||||| |||| |  ||||||||||||||||||||||||||    
T  22077923 ttacttataagatgttcaacctttatttttctatccgatttaaaacatataactcacacttgcacacaa 22077991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 50052118 - 50052178
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacactt 217  Q
    ||||||||||  ||||||||||||||| || ||| |||||||| |||||||||||||||||    
T  50052118 ttacttataagatgttcaacctttactattttatccgatgtgggacatataactcacactt 50052178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 22077118 - 22077213
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||||||||||  | | |||||||||  |||||| ||||| |||||||||||  ||| |||||| | ||||||  |||||||||||||||||||||    
T  22077118 tccacatcgaggcttgaacaaccgcataagtgagggagacgtcacactcttatccaaaaccttagggcaatgagtttatgggtcctcttacttata 22077213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 26661995 - 26662066
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||| |||||||||||||||| || |||  ||| ||| | |||||||||||||||| |||||||||||    
T  26661995 acttataaggtgttcaacctttactcttttatctgatatgggatatataactcacacttgtacacaacaaca 26662066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 220
Target Start/End: Complemental strand, 41759601 - 41759483
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattc 192  Q
    ||||||||| ||||||||||| ||| |||||||| ||||| | |||||| || |||||||         ||||| ||||||||| |||||| || ||| |    
T  41759601 agagagacaccacactcttacccaaaaccttaaggcaatggatttatggatcatcttact---------tataaggtgttcaacttttactattttatcc 41759511  T
Q  193 gatgtggaacatataactcacacttgca 220  Q
    ||||||  ||||||||||||||||||||    
T  41759510 gatgtgtgacatataactcacacttgca 41759483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 19283558 - 19283620
Alignment:
Q  165 aaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||| |||||||  ||| |||||| || ||||| |||||||||||||||||||||||||||    
T  19283558 aaagtgctcaacctccacttttctatccggtgtgggacatataactcacacttgcacacaaca 19283620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 22077245 - 22077287
Alignment:
Q  185 ttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||| |||||||| |||||||||||||||||||||||||||    
T  22077245 ttctatccgatgtgggacatataactcacacttgcacacaaca 22077287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 45839675 - 45839615
Alignment:
Q  171 ttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaaa 232  Q
    ||||||||||| | |||||| |||||||| |||||||||||| ||||| |||||||||||||    
T  45839675 ttcaacctttatt-ttctatccgatgtgggacatataactcatacttgtacacaacaacaaa 45839615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 66182 - 66254
Alignment:
Q  157 ttacttataaagtgttcaa-cctttactgttctattcgatgtggaacat-ataactcacacttgcacacaaca 227  Q
    |||||||||| |||||||| |||||||| |||||| |||||||  |||| || ||||||||||||||||||||    
T  66182 ttacttataaggtgttcaaacctttacttttctatccgatgtgagacatgattactcacacttgcacacaaca 66254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 9955971 - 9955899
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattc-gatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||||||| |||||||||||||||| || |  || ||||||| ||||||||||||||||  ||||||||||    
T  9955971 ttacttataatgtgttcaacctttactttttttatctgatgtgggacatataactcacactaacacacaacaa 9955899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 37555793 - 37555721
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaac 229  Q
    |||||||||| || ||||||||| ||| || ||| |||||||| || ||||||||||||||  ||||||||||    
T  37555793 ttacttataatgtattcaaccttcactattttatccgatgtgggacttataactcacacttttacacaacaac 37555721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 220
Target Start/End: Original strand, 45494014 - 45494137
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattc 192  Q
    ||||||||| ||||||||||  ||| || ||||| |||||   |||||| || ||||||||||||     |||  |||||||||||||||| || ||| |    
T  45494014 agagagacaccacactcttatccaaaactttaaggcaatgggtttatggatcatcttacttatat-----atatggtgttcaacctttactattttatcc 45494108  T
Q  193 gatgtggaacatat-aactcacacttgca 220  Q
    ||||||| |||||| ||||||||||||||    
T  45494109 gatgtgggacatataaactcacacttgca 45494137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 44043812 - 44043875
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    ||||||||| ||||||||||| ||| | ||||||||||||   ||||||||| |||||||||||    
T  44043812 agagagacaccacactcttacccaaaatcttaagacaatgggtttatgggtcatcttacttata 44043875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 1187461 - 1187527
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaa 225  Q
    ||||||||| |||| |||||  ||| || |||||||||||  |||||||| ||||||||||||||||    
T  1187461 acttataaaatgtttaacctccacttttatattcgatgtgagacatataattcacacttgcacacaa 1187527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 30630733 - 30630803
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||||||||  |||||||| | || ||| |||||||  |||||||| ||||||||||||| ||||    
T  30630733 ttacttataaagtgtcaaacctttaattttttatccgatgtgagacatataaatcacacttgcacataaca 30630803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 150
Target Start/End: Original strand, 32168697 - 32168795
Alignment:
Q  52 aggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctctta 150  Q
    |||||||  |||||||||||  ||| |||||||||| ||  ||||||||  ||||||||||| ||| |||| ||| |||||   |||||||||||||||    
T  32168697 aggggactgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaacctcaaggcaatgggtttatgggtcctctta 32168795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 47379889 - 47379943
Alignment:
Q  166 aagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||||||||||  ||| |||||| |||||||| | ||||||||||||||||||    
T  47379889 aagtgttcaacctccacttttctatccgatgtgggatatataactcacacttgca 47379943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 9956041 - 9955989
Alignment:
Q  79 caaccgcactagtgagagagacatcacactcttactcaacaccttaagacaat 131  Q
    ||||||||| ||  ||||||||||||||||||||| ||| |||||||| ||||    
T  9956041 caaccgcacaagcaagagagacatcacactcttacccaaaaccttaaggcaat 9955989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 37850599 - 37850659
Alignment:
Q  52 aggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactctta 112  Q
    |||||||  |||||||||||  |||  ||||||||| ||||||||||||| ||||||||||    
T  37850599 aggggaccgtccacatcgaggctagagcaaccgcacaagtgagagagacaccacactctta 37850659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 1e-26; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 32 - 230
Target Start/End: Complemental strand, 9309535 - 9309345
Alignment:
Q  32 tgttgggtcattggggga--tcaggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagaca 129  Q
    |||||||||| |||||||  || ||||||  |||||||||||  ||| |||||| || || ||||||||||| ||||||||||| | |||||||||| ||    
T  9309535 tgttgggtcactgggggagctcgggggaccgtccacatcgaggctagaacaaccaca-tactgagagagacaccacactcttacccgacaccttaaggca 9309437  T
Q  130 atgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaac 229  Q
    ||||  ||| |||||||||||||||||         | ||||||||| |||||| || ||| |||||||| |||||||||||||||||||||||||||||    
T  9309436 atgagtttaagggtcctcttacttata---------aggtgttcaacatttactcttttatccgatgtgggacatataactcacacttgcacacaacaac 9309346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 3038385 - 3038460
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaaa 232  Q
    ||||||||||||||||||||||||||| || ||| |||||||| |||||||||||||||||| |||||||||||||    
T  3038385 ttacttataaagtgttcaacctttactattttatccgatgtgggacatataactcacacttgtacacaacaacaaa 3038460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 61 - 220
Target Start/End: Complemental strand, 30441235 - 30441081
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||||||| ||  ||||||||| ||||||||||| ||| |||||||| |||||   ||||||| ||||||||||||| |      
T  30441235 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggccctcttacttataat-- 30441138  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
       ||| |||||||||||||||| || ||  |||||||| ||||||||||||||||||||    
T  30441137 ---taaggtgttcaacctttactattttagccgatgtgggacatataactcacacttgca 30441081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 45122067 - 45122220
Alignment:
Q  63 cacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattactt 162  Q
    |||||||||  ||| |||||| ||| ||| ||||||||| ||||||||||| ||| ||||||||| |||||  |||||||| ||||||||||||          
T  45122067 cacatcgaggctagaacaaccccacaagtaagagagacaccacactcttacccaaaaccttaagaaaatgagtttatgggttctcttacttata------ 45122160  T
Q  163 ataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaa 225  Q
       | |||||||||||||||| || ||| |||||||  |||||||||||||||||||||||||    
T  45122161 ---aggtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaa 45122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 32 - 153
Target Start/End: Complemental strand, 6732074 - 6731953
Alignment:
Q  32 tgttgggtcattgggggatcaggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaat 131  Q
    ||||||||||||||||  | ||||||   ||||||||||| |||| |||||||||  ||  ||||||||| ||||||||||||||| |||||||| ||||    
T  6732074 tgttgggtcattggggagttaggggatcatccacatcgaggttagaacaaccgcataagcaagagagacaccacactcttactcaaaaccttaaggcaat 6731975  T
Q  132 gaacttatgggtcctcttactt 153  Q
    ||| |||||||| |||||||||    
T  6731974 gaatttatgggttctcttactt 6731953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 41972219 - 41972151
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||| |||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  41972219 acttataaggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcacacaaca 41972151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 220
Target Start/End: Complemental strand, 3669837 - 3669687
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||||||| ||  ||||||||| ||||||||||| ||| |||||||| ||||||  ||||| |||||||||||            
T  3669837 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttact-------- 3669746  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
     ||||| |||||||||||||||| || |||  ||||||| ||||||||||||||||||||    
T  3669745 -tataaggtgttcaacctttactattttatctgatgtgggacatataactcacacttgca 3669687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 9608808 - 9608738
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||| |||||||||||||||| |||||| |||| ||| |||||||||||||||||||||||||||    
T  9608808 ttacttataaggtgttcaacctttacttttctatccgatatgggacatataactcacacttgcacacaaca 9608738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 8918859 - 8918932
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||||||||||||||||||||||| | ||||  ||||||| |||| |||||||||||||||||||||||||    
T  8918859 ttacttataaagtgttcaacctttactctgctatctgatgtgggacatgtaactcacacttgcacacaacaaca 8918932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 45122005 - 45122070
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcaca 222  Q
    ||||||||||||||||||||||||||| || ||| |||||||| ||||||||||||||||||||||    
T  45122005 ttacttataaagtgttcaacctttactattttatgcgatgtgggacatataactcacacttgcaca 45122070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 52 - 231
Target Start/End: Original strand, 25561814 - 25561985
Alignment:
Q  52 aggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactc-aacaccttaagacaatgaacttatgggtcctctta 150  Q
    ||||||| ||||||||||||  |||  ||||| ||| ||  |||||||  |||||||||||| | || |||||||||||||||  |||||||||||||||    
T  25561814 aggggaccttccacatcgaggctagagcaaccacacaagcaagagagatgtcacactcttaccccaaaaccttaagacaatgagtttatgggtcctctta 25561913  T
Q  151 cttatattacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    ||||||         | ||||||||| |||||| || ||| |||||||| |||||||||||||||||| | ||||||||||    
T  25561914 cttata---------aggtgttcaacgtttactcttttatccgatgtgggacatataactcacacttgtagacaacaacaa 25561985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 61 - 230
Target Start/End: Complemental strand, 34835026 - 34834866
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||| ||| ||  ||||||||| ||||||||||| ||| |||||||| ||||||  ||||| ||| |||||||||||        
T  34835026 tccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcatcttacttata---- 34834931  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
         | ||||| |||||||||| || ||| | |||||| |||||||||||||||||| |||||||||||    
T  34834930 -----aggtgtttaacctttactattttatccaatgtgggacatataactcacacttgtacacaacaaca 34834866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 4154763 - 4154831
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    ||||||||||||||||||||  ||| ||||||  ||||||| |||||||||||||||||||||||||||    
T  4154763 acttataaagtgttcaacctccacttttctatcagatgtgggacatataactcacacttgcacacaaca 4154831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 5916048 - 5915928
Alignment:
Q  31 ttgttgggtcattggggga-tcaggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagaca 129  Q
    ||||||| ||||||||||| |  ||||||  |||||||||||  ||| |||||||||| ||  ||||||||| ||||||||||| ||| |||||||| ||    
T  5916048 ttgttggatcattgggggagttcggggaccgtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggca 5915949  T
Q  130 atgaacttatgggtcctctta 150  Q
    ||||  |||||||||||||||    
T  5915948 atgagtttatgggtcctctta 5915928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 230
Target Start/End: Original strand, 33113392 - 33113535
Alignment:
Q  78 acaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacc 177  Q
    |||||| ||||||  ||||||||| ||||||||||| ||| | |||||| ||||||  |||||||||||||||||||||  ||         ||||||||    
T  33113392 acaaccacactagcaagagagacaccacactcttacccaaaatcttaaggcaatgagtttatgggtcctcttacttataagac---------gttcaacc 33113482  T
Q  178 tttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| || ||| |||||| | |||||||||||| ||||| |||||||||||    
T  33113483 tttactattttatccgatgtaggacatataactcaaacttgtacacaacaaca 33113535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 61 - 220
Target Start/End: Original strand, 1013879 - 1014029
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||||||| ||| | ||||||| ||||||||||||||| ||  |||| |||||   |||| ||||||||||||||||        
T  1013879 tccacatcgaggctagaacaaccgcacaagtaaaagagacaacacactcttactcaaaactctaaggcaatgggtttattggtcctcttacttatagg-- 1013976  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
           ||||||||| |||||| || ||| |||||||||||||||||||||||||||||    
T  1013977 -------gtgttcaacttttactattttatccgatgtggaacatataactcacacttgca 1014029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 32 - 150
Target Start/End: Complemental strand, 6651674 - 6651555
Alignment:
Q  32 tgttgggtcattgggggatcagggg-acattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaa 130  Q
    ||||||||||||||||  | ||||| ||  ||||||||||| |||| |||| ||||| ||  ||||||||| ||||||||||| ||| |||||||| |||    
T  6651674 tgttgggtcattggggagttagggggaccatccacatcgaggttagaacaatcgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaa 6651575  T
Q  131 tgaacttatgggtcctctta 150  Q
    |||| |||||||| ||||||    
T  6651574 tgaatttatgggttctctta 6651555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 35 - 230
Target Start/End: Original strand, 6876842 - 6877031
Alignment:
Q  35 tgggtcattggggga--tcaggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatg 132  Q
    |||||||||||||||  || ||||||  |||||||||||  ||| |||||| ||| |   ||||| ||| ||||||||||| ||| ||| ||||||||||    
T  6876842 tgggtcattgggggagctcgggggaccgtccacatcgaggctagaacaaccacacaaacaagagaaacaccacactcttacccaaaaccctaagacaatg 6876941  T
Q  133 aacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattcgatgtggaac-atataactcacacttgcacacaacaaca 230  Q
    |   |||||||| ||||| |||||         | |||||||||||||||| || ||| |||||||| || ||||||||||||||||||||||||||||    
T  6876942 agtgtatgggtcatcttatttata---------aggtgttcaacctttacttttttatccgatgtgggactatataactcacacttgcacacaacaaca 6877031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 9483195 - 9483290
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||||||||||  ||| |||||||||| ||  | ||||||| ||||||||||| ||| ||||||||||||||   |||||||||||||||||||||    
T  9483195 tccacatcgaggctagaacaaccgcacgagcaaaagagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttata 9483290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 232
Target Start/End: Original strand, 43274824 - 43274949
Alignment:
Q  98 gacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattcgatgt 197  Q
    |||| ||||||||||||||| |||||||||||||    ||||||||||||||||||||| ||         | ||||||||||||| || |||  |||||    
T  43274824 gacaccacactcttactcaaaaccttaagacaataggtttatgggtcctcttacttataata---------tattcaacctttactcttttatctgatgt 43274914  T
Q  198 ggaacatataactcacacttgcacacaacaacaaa 232  Q
    | ||||||||||||||||||  |||||||||||||    
T  43274915 gaaacatataactcacacttatacacaacaacaaa 43274949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 147510 - 147441
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| |||||||||||||||| || ||| |||||||| ||||||||||||||||| ||| ||||||||    
T  147510 ttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacacttacacgcaacaaca 147441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 37544498 - 37544658
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||||||| ||| ||| ||||| ||||||||||| ||| |||||||   |||| | ||||||||||||         || |    
T  37544498 tccacatcgaggctagaacaaccgcacaagtaagaaagacaccacactcttacccaaaaccttaaagtaatggatttatgggtcctc---------tttc 37544588  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| |||||||||||||||| || ||| |||||||  || |||||||||||||||  ||||||||||    
T  37544589 ttataatgtgttcaacctttactattttatccgatgtgcgacttataactcacacttgtgcacaacaaca 37544658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 30359331 - 30359259
Alignment:
Q  160 cttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaaa 232  Q
    ||||||| ||||||||| |||||| || ||| |||||||  |||||||||||||||||| |||||||||||||    
T  30359331 cttataaggtgttcaacatttactcttttatccgatgtgagacatataactcacacttgtacacaacaacaaa 30359259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 40518641 - 40518577
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaa 225  Q
    |||||| |||||||||||||||| ||||||  ||||||| |||||||||||||||||| ||||||    
T  40518641 ttataaggtgttcaacctttacttttctatctgatgtgggacatataactcacacttgaacacaa 40518577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 220
Target Start/End: Complemental strand, 3670210 - 3670060
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||||||| ||  ||||||||| ||||||||||| ||| ||||||||  |||    |||||||||||| ||||||||        
T  3670210 tccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggaaataggtttatgggtcctcatacttata---- 3670115  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
         | ||||| |||||||||| || ||| |||||||| ||||||||||||||||||||    
T  3670114 -----aggtgttaaacctttactattttatccgatgtgggacatataactcacacttgca 3670060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 228
Target Start/End: Complemental strand, 5420801 - 5420643
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  | | |||||| ||| |||||| ||||| ||||||||||||  || |||||||| |||||   ||||| |||||||||||            
T  5420801 tccacatcgaggcttgaacaaccacacaagtgagggagacgtcacactcttacaaaaaaccttaaggcaatgggtttatgagtcctcttact-------- 5420710  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
     |||||  ||||||||||||||| |||||| |||||||| ||||||||  |||||||||| |||||||    
T  5420709 -tataagatgttcaacctttactattctatccgatgtgggacatataatacacacttgcatacaacaa 5420643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 18380112 - 18380171
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacact 216  Q
    |||||||||| |||||||||||||||| || |||||||||||| | ||||||||||||||    
T  18380112 ttacttataaggtgttcaacctttactattttattcgatgtgggatatataactcacact 18380171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 156
Target Start/End: Complemental strand, 45122782 - 45122679
Alignment:
Q  53 ggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttact 152  Q
    |||||| ||||||||||||  | | |||||| ||| ||  ||||||||  ||||||| ||| ||| |||||||||||||||  |||||||||||||||||    
T  45122782 ggggaccttccacatcgaggcttgaacaaccacacaagcaagagagacgccacactcatacccaaaaccttaagacaatgagtttatgggtcctcttact 45122683  T
Q  153 tata 156  Q
    ||||    
T  45122682 tata 45122679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 9482699 - 9482770
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||||||||| || ||| | |||||||||||||||||  |||||| |||||||||||    
T  9482699 ttacttataaggtgttcaacctttactcttttatcccatgtggaacatataact--cacttgtacacaacaaca 9482770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 33832041 - 33831971
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||||||||||||| | |||| |||| ||| | |||  |||||||||||||||||||||||||||    
T  33832041 ttacttataaagtgttcaacttctacttttctcttcaacgtgagacatataactcacacttgcacacaaca 33831971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 40518134 - 40518061
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttct--attcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||||||| |||||||||||||||| || |  || | ||||||||||||||||||||||||| |||||||||    
T  40518134 ttacttataaggtgttcaacctttacttttttttatccaatgtggaacatataactcacacttgaacacaacaa 40518061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 230
Target Start/End: Complemental strand, 45123156 - 45122996
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcaca--ctcttactcaacaccttaagacaatgaacttatgggtcctcttacttatatt 158  Q
    |||||||||||||||| |||||| ||| | | ||||||||| ||||  ||||||| ||| ||||||||| |||    ||||||||| |||||||          
T  45123156 tccacatcgagattagaacaaccccacaaataagagagacaccacactctcttacccaaaaccttaagaaaataggtttatgggtcatcttact------ 45123063  T
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
         ||| ||||| |||||||||| || ||| |||||||| |||||||||||||||||||||||| |||||    
T  45123062 -----taaggtgtttaacctttactattttatccgatgtgggacatataactcacacttgcacacagcaaca 45122996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 147880 - 147819
Alignment:
Q  169 tgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||| |||||| || |||  ||||||| ||||||||||||||||||||||||||||||    
T  147880 tgttcaacatttacttttttatcagatgtgggacatataactcacacttgcacacaacaaca 147819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 4154377 - 4154446
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    ||||||||||||||||||||  ||| ||||||  ||||| | |||||||||||||| |||||||||||||    
T  4154377 acttataaagtgttcaacctccacttttctatctgatgtaggacatataactcacatttgcacacaacaa 4154446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 18372351 - 18372416
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcaca 222  Q
    |||||||||| |||||||||||||||| || ||| |||||||  ||||||||||||||||| ||||    
T  18372351 ttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacactttcaca 18372416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 18372794 - 18372859
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcaca 222  Q
    |||||||||| |||||||||||||||| || ||| |||||||  ||||||||||||||||| ||||    
T  18372794 ttacttataaggtgttcaacctttactattttatccgatgtgtgacatataactcacactttcaca 18372859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 30359672 - 30359599
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| ||||||||| |||||| || |||  ||||||  |||||||||||||||||| |||||||||||    
T  30359672 ttacttataaggtgttcaacttttactcttttatctgatgtgagacatataactcacacttgtacacaacaaca 30359599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 230
Target Start/End: Complemental strand, 34835327 - 34835199
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattc 192  Q
    |||| |||| ||||||||||| ||| || ||||| ||||||  |||||||||||||||||         ||||| |||||||||||||||| || |||      
T  34835327 agagtgacaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttact---------tataaggtgttcaacctttactattttatcg 34835237  T
Q  193 gatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||| ||||||||||||| |||| ||||| |||||    
T  34835236 gatgtgggacatataactcacccttgtacacagcaaca 34835199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 1514010 - 1514078
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaa 225  Q
    |||||||||| |||||||||||||||| || ||| |||||||| | |||||||||| ||||| ||||||    
T  1514010 ttacttataaggtgttcaacctttactcttttatccgatgtgggatatataactcatacttgtacacaa 1514078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 161 - 225
Target Start/End: Complemental strand, 5274834 - 5274770
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaa 225  Q
    |||||||||||||||||| | || || ||||| |||| |||||||||||||| ||||||||||||    
T  5274834 ttataaagtgttcaacctctccttttttattcaatgtagaacatataactcatacttgcacacaa 5274770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 41416266 - 41416322
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcac 213  Q
    |||||||||| |||||||||||||||| || ||| |||||||| |||||||||||||    
T  41416266 ttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcac 41416322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 210
Target Start/End: Original strand, 18372020 - 18372142
Alignment:
Q  79 caaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacct 178  Q
    ||||||||| || |||||| ||| ||||||||||| ||| |||||||  ||||||  |||||| |||||         |||||||||| |||||||||||    
T  18372020 caaccgcacaagcgagagaaacaccacactcttacccaaaaccttaaagcaatgagtttatggatcctc---------ttacttataaggtgttcaacct 18372110  T
Q  179 ttactgttctattcgatgtggaacatataact 210  Q
    ||||| || |||| ||||||| ||||||||||    
T  18372111 ttactattttattggatgtggtacatataact 18372142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 220
Target Start/End: Complemental strand, 6731953 - 6731904
Alignment:
Q  171 ttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    ||||||||||||| || ||| |||||||| ||||||||||||||||||||    
T  6731953 ttcaacctttactattttatccgatgtgggacatataactcacacttgca 6731904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 8794174 - 8794101
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||||||  |||||||| |||| | || ||| |||||||  |||||||||||||||||| |||||||||||    
T  8794174 ttacttataagatgttcaacatttattcttttatccgatgtgagacatataactcacacttgtacacaacaaca 8794101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 9620385 - 9620454
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    ||||||||||||||||| ||  ||| |||||||| | |||| | |||||||| |||||||||||||||||    
T  9620385 acttataaagtgttcaaactccacttttctattcaacgtgggatatataactgacacttgcacacaacaa 9620454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 25561739 - 25561792
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataact 210  Q
    |||||||||| |||||||||||||||| || ||| |||||||| ||||||||||    
T  25561739 ttacttataaggtgttcaacctttactcttttatccgatgtgggacatataact 25561792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 45121751 - 45121823
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| ||| |||||||||||| || ||| |||||||| ||| | |||||||||||| |||||||||||    
T  45121751 ttacttataaggtgatcaacctttactcttttatccgatgtgggaca-acaactcacacttgtacacaacaaca 45121823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 9620773 - 9620841
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||||| ||||| | |||| ||||||  | ||||  |||||||||||||||||||||||||||    
T  9620773 acttataaagtgatcaacttctacttttctatctgttgtgagacatataactcacacttgcacacaaca 9620841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 227
Target Start/End: Original strand, 20995502 - 20995566
Alignment:
Q  163 ataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    ||||||||||||||||  ||| || |||  ||||||  |||||||||||||||||||||||||||    
T  20995502 ataaagtgttcaacctccacttttttatctgatgtgagacatataactcacacttgcacacaaca 20995566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 1014340 - 1014403
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||||||| |||||||||||||||| || |||  |||||   ||||||||||||||||||||    
T  1014340 ttacttataaggtgttcaacctttactattttatctgatgtatgacatataactcacacttgca 1014403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 159 - 218
Target Start/End: Original strand, 30486319 - 30486378
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttg 218  Q
    |||| |||||||||||||| || || ||||| || |||||| ||||||||||||||||||    
T  30486319 acttgtaaagtgttcaaccatttcttttctaatcaatgtggtacatataactcacacttg 30486378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 34835593 - 34835530
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||| |||| ||||||||||| ||| || ||||| ||||||  |||||||||||||||||||||    
T  34835593 agagtgacaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttata 34835530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 34835859 - 34835796
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||| |||| ||||||||||| ||| || ||||| ||||||  |||||||||||||||||||||    
T  34835859 agagtgacaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttata 34835796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 41129138 - 41129067
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatg 132  Q
    ||||||||||| || | |||||| ||| ||| ||||||||| ||||||| ||| ||| ||||||||||||||    
T  41129138 tccacatcgaggtttgaacaaccacacaagtaagagagacaccacactcatacccaaaaccttaagacaatg 41129067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 70369 - 70442
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    ||||||||||  |||||||| |||||| || ||| |||||||| |||||||||||||  ||| ||||||||||||    
T  70369 ttacttataagatgttcaacatttactcttttatccgatgtgggacatataactcac-tttgtacacaacaacaa 70442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 20870668 - 20870733
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaac--atataactcacacttgca 220  Q
    ||||||||||  ||||||||||||||| || |||  ||||||||||  ||||||||||||||||||    
T  20870668 ttacttataagatgttcaacctttactattttatctgatgtggaacatatataactcacacttgca 20870733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 5274891 - 5274842
Alignment:
Q  95 agagacatcacactcttactcaacaccttaagacaatgaacttatgggtc 144  Q
    ||||||||||||||||||||||| | |||||| ||||||  |||||||||    
T  5274891 agagacatcacactcttactcaaaatcttaaggcaatgattttatgggtc 5274842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 9309042 - 9308970
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtgga--acatataactcacacttgcacacaaca 227  Q
    ||||||||||  |||||||| |||||| || |||  |||||| |  |||||||||||||||||||||||||||    
T  9309042 ttacttataacatgttcaacttttactcttttatctgatgtgtaggacatataactcacacttgcacacaaca 9308970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 18372698 - 18372758
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttg 218  Q
    |||||||||| |||||||||||||||| || ||| |||  |||||||||||| |||||||||    
T  18372698 ttacttataa-gtgttcaacctttactattttatccgaaatggaacatataaatcacacttg 18372758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 18373030 - 18373098
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| |||||||||||||||| || ||| ||| |||| |||||||| |||||| || |||||||||||    
T  18373030 ttataaggtgttcaacctttactattttatccgaagtgggacatataaatcacac-tgtacacaacaaca 18373098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 40579601 - 40579662
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttg 218  Q
    |||||||||| |||||||||||||||| || ||| | || || ||||||||| |||||||||    
T  40579601 ttacttataaggtgttcaacctttactattttatccaatatgaaacatataattcacacttg 40579662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 45121664 - 45121729
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaag 126  Q
    |||||||||||  ||| |||||| ||  ||| ||||||| ||||||||||||||||| ||||||||    
T  45121664 tccacatcgaggctagaacaaccccataagtaagagagatatcacactcttactcaaaaccttaag 45121729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 229
Target Start/End: Complemental strand, 5915891 - 5915863
Alignment:
Q  201 acatataactcacacttgcacacaacaac 229  Q
    |||||||||||||||||||||||||||||    
T  5915891 acatataactcacacttgcacacaacaac 5915863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 18645712 - 18645752
Alignment:
Q  187 ctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||| |||||||  |||||||||||||||||||||||||||    
T  18645712 ctatccgatgtgagacatataactcacacttgcacacaaca 18645752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 32640634 - 32640694
Alignment:
Q  169 tgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaac 229  Q
    ||||||||||||||| || ||| |||||||  ||| ||||||||||||| ||| |||||||    
T  32640634 tgttcaacctttactcttttatccgatgtgagacagataactcacacttccacgcaacaac 32640694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 40579269 - 40579329
Alignment:
Q  53 ggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttac 113  Q
    ||||||| |||||||||||  ||| |||||||||| ||  ||||||||| |||||||||||    
T  40579269 ggggacagtccacatcgaggctagaacaaccgcacaagcaagagagacaccacactcttac 40579329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 6e-25; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 89 - 227
Target Start/End: Original strand, 33561487 - 33561616
Alignment:
Q  89 agtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttct 188  Q
    ||||||||||| ||||||||||||| ||| |||||||||||||||  ||||||||||||| ||||         |||||||||| |||||  ||| ||||    
T  33561487 agtgagagagatatcacactcttacccaaaaccttaagacaatgagtttatgggtcctctcactt---------ataaagtgtttaacctccacttttct 33561577  T
Q  189 attcgatgtggaacatataactcacacttgcacacaaca 227  Q
    ||  |||||||||||||||||||||||||||||||||||    
T  33561578 atctgatgtggaacatataactcacacttgcacacaaca 33561616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 61 - 230
Target Start/End: Complemental strand, 6421535 - 6421375
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||| ||| |||||||||| ||  ||||||||| ||||||||||| ||| |||| ||| ||||||  ||||| |||||||||||||||        
T  6421535 tccacatcgagactagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgagtttatgagtcctcttacttata---- 6421440  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
         | |||||||||||||||| || ||| |||||||| ||||||||||||||||||  ||||||||||    
T  6421439 -----aggtgttcaacctttactcttttatccgatgtgggacatataactcacacttgtgcacaacaaca 6421375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 61 - 230
Target Start/End: Complemental strand, 15880413 - 15880253
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||  |||||||||| ||  ||||||||  ||||||||||| ||| |||||||| |||||   |||||||||||||||||||||        
T  15880413 tccacatcgaggctaaaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata---- 15880318  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
         | |||||||||||||||| || ||| ||||||||||||||||||||||||||| |||||||||||    
T  15880317 -----aggtgttcaacctttactcttttatccgatgtggaacatataactcacacttgtacacaacaaca 15880253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 61 - 227
Target Start/End: Complemental strand, 962748 - 962591
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||| ||| ||  |||| |||| ||||||||||| ||| ||||||||||||||   ||||||||||||| |||||||        
T  962748 tccacatcgaggctagaacaaccacacaagcaagagtgacaacacactcttacccaaaaccttaagacaatgggtttatgggtcctctcacttata---- 962653  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
         | |||||||||||||||| |||||| |||||||| |||||||||||||||||||| ||||||    
T  962652 -----aggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcatacaaca 962591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 92 - 230
Target Start/End: Original strand, 28254276 - 28254405
Alignment:
Q  92 gagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctatt 191  Q
    |||||||||| ||||||||||| ||| |||||||| ||||||  |||||||||||||||||||||  |         ||||||||||||||| ||||||     
T  28254276 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaga---------tgttcaacctttacttttctatc 28254366  T
Q  192 cgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||| |||||||| ||||||| |||||||||||||    
T  28254367 cgatgtgggacatataagtcacactggcacacaacaaca 28254405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 61 - 231
Target Start/End: Original strand, 36005888 - 36006048
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||| ||| ||  ||||||||  |||||| |||| ||| |||||||| ||||||  |||||||||||||||||||||        
T  36005888 tccacatcgaggctagaacaaccccacaagcaagagagacgccacacttttacccaaaaccttaaggcaatgagtttatgggtcctcttacttata---- 36005983  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
         | ||||||||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  36005984 -----aggtgttcaacttttact-ttctattcgatgtgggacatataactcacacttgtacacaacaacaa 36006048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 38796313 - 38796386
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| ||||||||| ||||||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  38796313 ttacttataaggtgttcaacatttactgttttatccgatgtgggacatataactcacacttgcacacaacaaca 38796386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 223
Target Start/End: Complemental strand, 7598391 - 7598225
Alignment:
Q  48 gatcaggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctc 147  Q
    |||||||||||  | |||||||||  | | |||||||||| ||||||||||||| || | |||||| ||| |||||||| | ||||  ||||||||||||    
T  7598391 gatcaggggaccgttcacatcgaggcttgaacaaccgcacaagtgagagagacaccatattcttacccaaaaccttaaggctatgagtttatgggtcctc 7598292  T
Q  148 ttacttatattacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacac 223  Q
    ||| |||||         | ||||| |||||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  7598291 ttatttata---------aggtgttgaacctttacttttctattcgatgtagaacatataattcacacttgcacac 7598225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 220
Target Start/End: Complemental strand, 37106074 - 37105924
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| ||||||| || ||  ||||||||| ||||||||||| ||| | |||||| ||||||  |||||||||| ||||||||||        
T  37106074 tccacatcgaggctagaacaaccgtacaagcaagagagacaccacactcttacccaaaatcttaaggcaatgagtttatgggtccccttacttata---- 37105979  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
         | |||||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  37105978 -----aggtgttcaacctttactattttattcgatgtgggacatataactcacacttgca 37105924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 38796715 - 38796790
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaaa 232  Q
    |||||||||| |||||||||||||| |||| |||  ||||||| ||||||||||||||||||||||||||||||||    
T  38796715 ttacttataaggtgttcaacctttattgttttatcagatgtgggacatataactcacacttgcacacaacaacaaa 38796790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 28531409 - 28531479
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||| ||||||||||||| || |||||| |||||||| |||||||||||||||||||||||||||    
T  28531409 ttacttataaggtgttcaacctttgcttttctatccgatgtgggacatataactcacacttgcacacaaca 28531479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 31899521 - 31899594
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| ||||||||| |||||| || ||| |||||||||||||||||||||||||| ||||||||||||    
T  31899521 ttacttataaggtgttcaacatttactattttatccgatgtggaacatataactcacactttcacacaacaaca 31899594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 220
Target Start/End: Original strand, 5542633 - 5542783
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||| | | |||||||||| ||  ||||||||| |||||||||||  || |||||||| ||||    |||||||||||||||||||||        
T  5542633 tccacatcgagacttgaacaaccgcacaagcaagagagacaccacactcttaccaaaaaccttaaggcaataggtttatgggtcctcttacttata---- 5542728  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
         | |||||||||||||||| || |||||||| ||| ||||||||||||||||||||    
T  5542729 -----aggtgttcaacctttactattttattcgatatgggacatataactcacacttgca 5542783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 220
Target Start/End: Original strand, 36178645 - 36178763
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacctttactgttctattc 192  Q
    ||||||||| ||||||||||| ||| |||||||| |||||   |||||||||||||||||||||         | |||||||||||||||| || ||| |    
T  36178645 agagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata---------aggtgttcaacctttactattttatcc 36178735  T
Q  193 gatgtggaacatataactcacacttgca 220  Q
    ||||||| ||||||||||||||||||||    
T  36178736 gatgtgggacatataactcacacttgca 36178763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 36785664 - 36785731
Alignment:
Q  163 ataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||| |||||||||||||||| || ||| |||||||| ||||||||||||||||||||||||||||||    
T  36785664 ataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 36785731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 61 - 230
Target Start/End: Original strand, 15511503 - 15511661
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||| ||| |||||| ||| ||  ||||||||| ||||||||||| ||| | ||||||||||||   ||||||||||||         ||||    
T  15511503 tccacatcgagactagaacaaccacacaagcaagagagacaccacactcttacccaaaatcttaagacaatgggtttatgggtcctc---------ttac 15511593  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| |||||||||||||||| || ||| || ||||  ||||||||||  ||||||||||||||||||    
T  15511594 ttataacgtgttcaacctttactcttttatccgttgtgtgacatataact--cacttgcacacaacaaca 15511661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 16542508 - 16542439
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| |||||||||||||||| || ||| |||||||| || |||||||||||||||||||||||||||    
T  16542508 ttataaggtgttcaacctttactattttatccgatgtgggacttataactcacacttgcacacaacaaca 16542439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 61 - 220
Target Start/End: Original strand, 14745675 - 14745825
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||| |||| |  ||||||||  ||||||||||| ||| |||||||| |||||   |||||||||||||||||||||        
T  14745675 tccacatcgaggctagaacaaccacacttgcaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata---- 14745770  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
         | |||||||||||||||| || ||| | |||||| ||||||||||||||||||||    
T  14745771 -----aggtgttcaacctttactattttatccaatgtgggacatataactcacacttgca 14745825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 171 - 230
Target Start/End: Original strand, 31468855 - 31468914
Alignment:
Q  171 ttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||||||||| || ||| |||||||| ||||||||||||||||||||||||||||||    
T  31468855 ttcaacctttactattttatccgatgtgggacatataactcacacttgcacacaacaaca 31468914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 61 - 220
Target Start/End: Complemental strand, 37106338 - 37106188
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||| ||||| ||  ||||| ||| ||||||||||| ||| ||||||||  ||||   |||||||||||||||||            
T  37106338 tccacatcgaggctagaacaatcgcacaagcaagagaaacaccacactcttacccaaaaccttaaggaaatgggtttatgggtcctcttact-------- 37106247  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
     ||||| |||||||||||||||| || ||| |||||||| ||||||||||||||||||||    
T  37106246 -tataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 37106188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 7598672 - 7598606
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacac 223  Q
    |||||||||| |||||||||||||||| || |||  ||||||| |||||||||||||||||||||||    
T  7598672 ttacttataaggtgttcaacctttacttttttatctgatgtgggacatataactcacacttgcacac 7598606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 35580820 - 35580886
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaa 225  Q
    |||||||| ||||||||| |||| |||| ||| |||||||| |||||||||||||||||||||||||    
T  35580820 acttataaggtgttcaacatttattgttttatccgatgtgggacatataactcacacttgcacacaa 35580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 40679724 - 40679794
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||| |||||||||| ||||| |||||| |||| ||| |||||||||||||| ||||||||||||    
T  40679724 ttacttataaggtgttcaacccttacttttctatccgatatgggacatataactcacatttgcacacaaca 40679794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 227
Target Start/End: Complemental strand, 42514799 - 42514642
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||||||  ||| |||||| ||| ||| ||||||||  ||||||||||| ||| | |||||| | |||   |||||||||||||||||            
T  42514799 tccacatcgaggctagaacaaccccacaagtaagagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggtcctcttact-------- 42514708  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
     ||||| |||||||||||||||| ||||||  ||||| | |||||||||||||||||||| ||||||    
T  42514707 -tataaggtgttcaacctttacttttctatctgatgtaggacatataactcacacttgcatacaaca 42514642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 6713039 - 6712966
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| ||||||||| ||||||||| ||| |||||||  |||||||||||||||||| | |||||||||    
T  6713039 ttacttataaggtgttcaacatttactgttttatccgatgtgagacatataactcacacttgtatacaacaaca 6712966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 40733946 - 40733873
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| ||||| || ||||||| || |||||||||||| |||||||||||||||||| |||||| ||||    
T  40733946 ttacttataaggtgttaaatctttactcttttattcgatgtgggacatataactcacacttgtacacaataaca 40733873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 3673250 - 3673123
Alignment:
Q  31 ttgttgggtcattgggggatca--ggggacattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagac 128  Q
    ||||||||||| ||||||| |   ||||||  |||||||||||  ||| |||||| ||||||| ||||||||||||||||||||  ||| | |||||  |    
T  3673250 ttgttgggtcactgggggagccagggggaccgtccacatcgaggctagaacaaccacactagtaagagagacatcacactcttagccaaaatcttaaagc 3673151  T
Q  129 aatgaacttatgggtcctcttacttata 156  Q
    |||||  |||||| ||||||||||||||    
T  3673150 aatgagtttatggatcctcttacttata 3673123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 12529123 - 12529195
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaac 229  Q
    |||||||||  |||||||| |||||||||| |||| ||||| | |||||||||||||||||||| ||||||||    
T  12529123 ttacttatacggtgttcaatctttactgttttatttgatgtaggacatataactcacacttgcatacaacaac 12529195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 29676961 - 29676893
Alignment:
Q  162 tataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||| ||||| |||||||||| || ||| |||||||| ||||||||||||||| ||||||||||||||    
T  29676961 tataaggtgttaaacctttactcttttatccgatgtgggacatataactcacacctgcacacaacaaca 29676893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 5543093 - 5543156
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||||||| |||||||||||||||| || |||  ||||||| ||||||||||||||||||||    
T  5543093 ttacttataaggtgttcaacctttactattttatcggatgtgggacatataactcacacttgca 5543156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 41283570 - 41283633
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||||||| |||||||||||||||| || ||| |||| ||| ||||||||||||||||||||    
T  41283570 ttacttataaggtgttcaacctttactattttatccgatatgggacatataactcacacttgca 41283633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 1769955 - 1769889
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacac 223  Q
    |||||||||| ||||||||| |||||| || ||| |||||||  |||||||||||||||||||||||    
T  1769955 ttacttataaggtgttcaacttttactcttttatccgatgtgtgacatataactcacacttgcacac 1769889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 37632692 - 37632762
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    ||||||||||| |||  |||||||||| || ||| |||||| | |||||||||||||||||||||||||||    
T  37632692 ttacttataaaatgtcaaacctttactattttatccgatgtaggacatataactcacacttgcacacaaca 37632762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 228
Target Start/End: Original strand, 29873563 - 29873703
Alignment:
Q  79 caaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacct 178  Q
    ||||| ||| |||||||||||| |||||||||||||||| |||||||| ||||||  ||||| ||||||  |||||||         || ||||||||||    
T  29873563 caaccacacaagtgagagagacgtcacactcttactcaaaaccttaaggcaatgagtttatgagtcctcccacttata---------aaatgttcaacct 29873653  T
Q  179 ttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
      ||| ||||||  ||||||| |||| |||| ||| ||||||||||||||    
T  29873654 ccacttttctatctgatgtgggacatgtaacacacccttgcacacaacaa 29873703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 40733580 - 40733507
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| ||||||||| |||||| || |||  ||||||| |||||||||||||||||| |||||| ||||    
T  40733580 ttacttataaggtgttcaacatttacttttttatctgatgtgggacatataactcacacttgtacacaataaca 40733507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 6422293 - 6422165
Alignment:
Q  30 tttgttgggtcattggggga-tcagggg-acattccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaaga 127  Q
    ||||||||||||| |||||| ||||||| ||| |||||||||||  ||| |||||| ||| ||  ||||||||| |||||||||||  || ||||||||     
T  6422293 tttgttgggtcatggggggaatcagggggacagtccacatcgaggctagaacaaccacacaagcaagagagacaccacactcttacctaaaaccttaagg 6422194  T
Q  128 caatgaacttatgggtcctcttacttata 156  Q
    | |||   ||||||||||||||| |||||    
T  6422193 ctatgggtttatgggtcctcttaattata 6422165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 12910289 - 12910221
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||| | ||||||||| |||| ||| || ||||||||||||||||||||| |||| |||||||||    
T  12910289 acttataaggggttcaacctgtacttttccatccgatgtggaacatataactcaaacttacacacaaca 12910221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 37894787 - 37894855
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaa 225  Q
    |||||||||| || || | |||||||| |||||||| |||||| |||||||||||||| ||||||||||    
T  37894787 ttacttataaggtttttagcctttacttttctattcaatgtgggacatataactcacatttgcacacaa 37894855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 157 - 209
Target Start/End: Original strand, 40163468 - 40163520
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataac 209  Q
    |||||||||| |||||||||||||||| |||||| |||||||| |||||||||    
T  40163468 ttacttataaggtgttcaacctttacttttctatccgatgtgggacatataac 40163520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 3672751 - 3672708
Alignment:
Q  188 tattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||||||||||| |||||||||||| ||||||||||||||||||    
T  3672751 tattcgatgtgggacatataactcatacttgcacacaacaacaa 3672708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 16590940 - 16590881
Alignment:
Q  169 tgttcaacctttactgttct-attcgatgtggaacatataactcacacttgcacacaaca 227  Q
    ||||||||||||||| || | ||| ||||||| |||||||||||||||||||||||||||    
T  16590940 tgttcaacctttactttttttatttgatgtgggacatataactcacacttgcacacaaca 16590881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 36178364 - 36178427
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||||||| |||||| ||||||||| || ||| ||| |||| ||||||||||||||||||||    
T  36178364 ttacttataaggtgttccacctttactattttatccgaagtgggacatataactcacacttgca 36178427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 3594275 - 3594341
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaa 225  Q
    ||||||||||||||| ||||  ||| ||||||||| |||| |||||| ||||||||||| |||||||    
T  3594275 acttataaagtgttcgacctccacttttctattcgttgtgaaacatacaactcacactttcacacaa 3594341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 172 - 230
Target Start/End: Complemental strand, 6421352 - 6421294
Alignment:
Q  172 tcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||||| || ||| |||||||| |||||||||| ||||||| |||||||||||    
T  6421352 tcaacctttactcttttatccgatgtgggacatataacttacacttgtacacaacaaca 6421294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 30313309 - 30313170
Alignment:
Q  79 caaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattacttataaagtgttcaacct 178  Q
    ||||| ||| ||||||||||||  ||||||||||| ||| | |||||| ||||||  || |||||||||| |||||||          ||||||||||||    
T  30313309 caaccacacaagtgagagagacgccacactcttacccaaaatcttaaggcaatgagtttttgggtcctctcacttata----------agtgttcaacct 30313220  T
Q  179 ttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
      ||| |||||| |||||||  ||||||||| ||| ||||||||||||||    
T  30313219 ccacttttctatccgatgtgagacatataacacacgcttgcacacaacaa 30313170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 198
Target Start/End: Original strand, 28254207 - 28254248
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtg 198  Q
    ||||||||||||||||||||||||||| |||||| |||||||    
T  28254207 ttacttataaagtgttcaacctttacttttctatccgatgtg 28254248  T

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Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 230
Target Start/End: Complemental strand, 3673111 - 3673075
Alignment:
Q  194 atgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||| ||||||||||||||||||||||||||||||    
T  3673111 atgtgggacatataactcacacttgcacacaacaaca 3673075  T

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Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 33953868 - 33953936
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    ||||||| ||||||||||||  ||| ||||||  ||||||| || ||||||||||| ||||||||||||    
T  33953868 acttatatagtgttcaacctccacttttctatctgatgtgggacttataactcacatttgcacacaaca 33953936  T

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Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 42515078 - 42515005
Alignment:
Q  158 tacttataaagtgttcaacctttactgttctattcgatgtggaacata----taactcacacttgcacacaaca 227  Q
    ||||||||| ||||| |||||||||| |||||| |||||||| |||||    |||||||||| |||||||||||    
T  42515078 tacttataaggtgtttaacctttacttttctatccgatgtgggacatacatataactcacacctgcacacaaca 42515005  T

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Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 14745401 - 14745452
Alignment:
Q  169 tgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    ||||||||| ||||| || |||||||||||| |||||||||||||| |||||    
T  14745401 tgttcaaccattactattttattcgatgtgggacatataactcacagttgca 14745452  T

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Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 29874122 - 29874185
Alignment:
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacaca 224  Q
    ||||||||||||||||||  ||| ||||||  ||||||| ||||||||| |||||||| |||||    
T  29874122 ttataaagtgttcaacctccacttttctatctgatgtgggacatataacacacacttgtacaca 29874185  T

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Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 37895156 - 37895227
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||| ||| || |||||| |||| | |||||| |||||||| |||||||||||| ||| |||||||||||    
T  37895156 ttacttttaaggttttcaacttttatttttctatccgatgtgggacatataactcaaactcgcacacaacaa 37895227  T

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Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 41283515 - 41283578
Alignment:
Q  93 agagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    ||||||||  |||||||||||  || |||||||| ||||||  |||||||||||||||||||||    
T  41283515 agagagacgccacactcttacctaaaaccttaaggcaatgagtttatgggtcctcttacttata 41283578  T

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Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 227
Target Start/End: Complemental strand, 5367518 - 5367448
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaaca 227  Q
    |||||||||| ||||||||||||| || || ||| |||| ||| |||||||  ||||||||| ||||||||    
T  5367518 ttacttataaggtgttcaacctttgctcttttatccgatctgggacatatatatcacacttgtacacaaca 5367448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 227
Target Start/End: Complemental strand, 23346386 - 23346228
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttatattac 160  Q
    |||||||| ||  ||| |||||||||| ||  |||||||||||||||||||||  || |||||||| | |||   ||||||| |||||||              
T  23346386 tccacatctaggctagaacaaccgcacaagcaagagagacatcacactcttaccgaaaaccttaaggctatgggtttatgggccctctta---------- 23346297  T
Q  161 ttataaagtgttcaacctttactgttctattcgatgtggaacatata--actcacacttgcacacaaca 227  Q
    |||||| ||||| |||||||||| |||||| |||||||  |||||||  ||||||||| ||||||||||    
T  23346296 ttataaggtgtttaacctttacttttctatacgatgtgagacatatataactcacactcgcacacaaca 23346228  T

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Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 33731711 - 33731630
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactc--acacttgcacacaacaacaaaattc 236  Q
    |||||||||| ||| |||||||||||| || ||| |||||||  | |||||||||  ||||||| |||||||||||| ||||    
T  33731711 ttacttataaggtgctcaacctttactcttttatccgatgtgagatatataactcacacacttgaacacaacaacaatattc 33731630  T

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Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 33954392 - 33954426
Alignment:
Q  193 gatgtggaacatataactcacacttgcacacaaca 227  Q
    ||||||| |||||||||||||||||||||||||||    
T  33954392 gatgtgggacatataactcacacttgcacacaaca 33954426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 30323525 - 30323456
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||| |||||||||||||||  | | ||||||  ||| ||| ||||||||| ||||||||||||||||||    
T  30323525 acttctaaagtgttcaacctccaattttctatctgatttgggacatataacacacacttgcacacaacaa 30323456  T

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Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 6421881 - 6421793
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctctt 149  Q
    |||||||||||   || |||||| ||| ||| ||||||||| ||||||||||| ||| |||||||| ||||    ||||||||||||||    
T  6421881 tccacatcgaggccagaacaaccacacaagttagagagacaccacactcttacccaaaaccttaaggcaataggtttatgggtcctctt 6421793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 153
Target Start/End: Complemental strand, 16591033 - 16590941
Alignment:
Q  61 tccacatcgagattagcacaaccgcactagtgagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttactt 153  Q
    ||||||| |||  ||| |||||| ||| ||| |||||||||| | | ||||||| || |||||||| |||||   ||||||||||||||||||    
T  16591033 tccacattgaggctagaacaaccccacaagtaagagagacattagattcttacttaaaaccttaaggcaatgtgtttatgggtcctcttactt 16590941  T

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Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 231
Target Start/End: Complemental strand, 43779838 - 43779810
Alignment:
Q  203 atataactcacacttgcacacaacaacaa 231  Q
    |||||||||||||||||||||||||||||    
T  43779838 atataactcacacttgcacacaacaacaa 43779810  T

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Target: scaffold0734 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 5459 - 5385
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||||||||| |||||||||||||||| || ||| |||||| | |||||||||||||||||||||||||||||||    
T  5459 ttacttataaggtgttcaacctttactattttatccgatgtaggacatataactcacacttgcacacaacaacaa 5385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 5840 - 5767
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| |||||||||||||||| || ||| |||||||  ||||||||||||||||||||||||||||||    
T  5840 ttacttataaggtgttcaacctttactattttatccgatgtgcgacatataactcacacttgcacacaacaaca 5767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 44; Significance: 6e-16; HSPs: 3)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 237 - 300
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgca 220  Q
    |||||||||| |||||||||||||||| || ||| |||||||| ||||||||||||||||||||    
T  237 ttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgca 300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 609 - 683
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaa 231  Q
    |||||||||| |||||||||||||||| || ||  |||||||| ||||||||||||||||||  |||||||||||    
T  609 ttacttataaggtgttcaacctttactcttttaaccgatgtgggacatataactcacacttgtgcacaacaacaa 683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 558 - 617
Alignment:
Q  97 agacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    ||||| ||||||||||| ||| |||||||| |||||   |||||||||||||||||||||    
T  558 agacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttata 617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 1204 - 1274
Alignment:
Q  160 cttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||| |||||||||||||||| || ||| | |||||| |||||||||||||||||| |||||||||||    
T  1204 cttataaggtgttcaacctttactcttttatccaatgtgggacatataactcacacttgtacacaacaaca 1274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 3092 - 3153
Alignment:
Q  169 tgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||||||||||| || ||| |||||||| ||||||||||||||| ||||||||||||||    
T  3092 tgttcaacctttactcttttatccgatgtgggacatataactcacacctgcacacaacaaca 3153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 1730 - 1794
Alignment:
Q  92 gagagagacatcacactcttactcaacaccttaagacaatgaacttatgggtcctcttacttata 156  Q
    |||||||||| |||||||||||  || |||||||| |||||   ||||||||||||| |||||||    
T  1730 gagagagacaccacactcttaccaaaaaccttaaggcaatgggtttatgggtcctctcacttata 1794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 17551 - 17624
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    ||||||| || |||||||||||||||| || |||  ||||||  ||||||||||||||||||||||||||||||    
T  17551 ttacttacaaggtgttcaacctttactattttatctgatgtgtgacatataactcacacttgcacacaacaaca 17624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 10206 - 10279
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaaca 230  Q
    |||||||||| ||||||||| |||||  || ||| |||||||  ||||||||||||||||||  ||||||||||    
T  10206 ttacttataaggtgttcaacttttaccattttatccgatgtgagacatataactcacacttgtgcacaacaaca 10279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 159 - 228
Target Start/End: Complemental strand, 39899 - 39830
Alignment:
Q  159 acttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaa 228  Q
    |||||||||| || |||||   ||| |||||| |||||||| |||||||||||||||||| |||||||||    
T  39899 acttataaagagtccaaccaccacttttctatccgatgtgggacatataactcacacttgaacacaacaa 39830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 232
Target Start/End: Complemental strand, 47423 - 47348
Alignment:
Q  157 ttacttataaagtgttcaacctttactgttctattcgatgtggaacatataactcacacttgcacacaacaacaaa 232  Q
    |||||||||| |||||||| ||||||| || |||  ||||||  |||| ||| ||||||||||||||| |||||||    
T  47423 ttacttataaggtgttcaaactttactattttatcggatgtgagacatttaattcacacttgcacacatcaacaaa 47348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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