View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19232_low_2 (Length: 580)
Name: NF19232_low_2
Description: NF19232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19232_low_2 |
 | |
|
| [»] scaffold0176 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 505; Significance: 0; HSPs: 29)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 505; E-Value: 0
Query Start/End: Original strand, 13 - 564
Target Start/End: Original strand, 36744783 - 36745337
Alignment:
| Q |
13 |
atcatcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaag |
112 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
36744783 |
atcatcaagggtgaagtctaaaagatgactgcaattagaagacagactctgaagaagtttctgcttcacatcaactagatggaacacaagagttctcaag |
36744882 |
T |
|
| Q |
113 |
ttttttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgagagaatcattgtcagataagagagtaagggaaaatt |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36744883 |
ttttttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgagagaatcattgtcagataagagagtaagggaaaatt |
36744982 |
T |
|
| Q |
213 |
tgtatggcaaaatagaatgagtagtatcatttgtttcagatgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaatctatc |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
36744983 |
tgtatggcaaaatagaatgagtagtatcatttgtttcagatgagaagagaagttcaatacgtttggcacccttagcaattcctttggagatcaatctatc |
36745082 |
T |
|
| Q |
313 |
aacgacatccctgtgttcattgcctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggca |
412 |
Q |
| |
|
|| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36745083 |
aatggcatccctgtgttcattgcctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggca |
36745182 |
T |
|
| Q |
413 |
aattcagattgaaagtgaaacctttgaaagaggggaaggctttttggtaagccttgaattgtgttatagtcaaacattgtatggagatcaaagttgagtt |
512 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36745183 |
aattcagattgaaagtgaaacctttgaaagagtggaaggctttttggtaagtcttgaattgtgttatagtcaaacattgtatggagatcaaagttgagtt |
36745282 |
T |
|
| Q |
513 |
ccgtctttaatcccc---attcgtgaatccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |||||||||||||| |
|
|
| T |
36745283 |
ccgtctttaatccccaatattcgtgaatccatcttttggataatgcacttgtttt |
36745337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 13 - 564
Target Start/End: Complemental strand, 42796923 - 42796372
Alignment:
| Q |
13 |
atcatcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaag |
112 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
42796923 |
atcatcaagggtgaagtctgcaagatggctgcaattggaacacagactctgaagcagtttctgattcacatcaactagatgcaacacaagagttctcaaa |
42796824 |
T |
|
| Q |
113 |
ttttttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgagagaatcattgtcagataagagagtaagggaaaatt |
212 |
Q |
| |
|
||||| |||||||| |||| || |||||||| || | |||||||| ||||||| |||||| ||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
42796823 |
tttttgaatccagagaagtccaaaggttctagtaggaagcagttttgcaggtgcatatacgtcagagaatcaaagtcagataagagagtaaggggaaatt |
42796724 |
T |
|
| Q |
213 |
tgtatggcaaaatagaatgagtagtatcatttgtttcagatgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaatctatc |
312 |
Q |
| |
|
|||||||| |||||||| | |||||||||||||||||||||| ||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
42796723 |
tgtatggcggaatagaatcaatagtatcatttgtttcagatgacaagagaagttcaatatgtttgacacccttagcaattcctttggagatcaatctatc |
42796624 |
T |
|
| Q |
313 |
aacgacatccctgtgttcattgcctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggca |
412 |
Q |
| |
|
|| | ||||||| |||||||||||||||||||| |||||||||||||||| ||| || |||||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
42796623 |
aatggcatccctatgttcattgcctaatggaaaatttactcggattgaacggatgatagcacctttataatggagcataaattgatccaatcttgtggca |
42796524 |
T |
|
| Q |
413 |
aattcagattgaaagtgaaacctttgaaagaggggaaggctttttggtaagccttgaattgtgttatagtcaaacattgtatggagatcaaagttgagtt |
512 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||| ||||| | ||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||| | |
|
|
| T |
42796523 |
aattgagattgaaagtgaaatctttgaaagagtggaagtgtgtttggtaagtcttgaattgtgttatagtcaaacatggtatgaagatcaaagttgaggt |
42796424 |
T |
|
| Q |
513 |
ccgtctttaatccccattcgtgaatccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
||||| |||||||||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
42796423 |
ccgtccttaatccccattcgtgaatccatcgtttggacaatgcgcttgtttt |
42796372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 13 - 564
Target Start/End: Complemental strand, 34146502 - 34145951
Alignment:
| Q |
13 |
atcatcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaag |
112 |
Q |
| |
|
|||||||||||||||||| ||||| || ||||||| ||||||| | |||||| |||| | | ||||||| |||| | || ||||||||||||||||| |
|
|
| T |
34146502 |
atcatcaagggtgaagtcaacaaggtgtttgcaatttgaacacaaagtctgaacaagtgtattcttcacaataacttgttgtaacacaagagttctcaaa |
34146403 |
T |
|
| Q |
113 |
ttttttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgagagaatcattgtcagataagagagtaagggaaaatt |
212 |
Q |
| |
|
|||||||||| ||| |||| | |||| | || || |||||||||||||||| ||| || | ||||||||| | || ||||||| |||||||||||| |
|
|
| T |
34146402 |
ttttttaatcgagagaagtatctgggtttgactaagaggcagttttgtaggtgcaaataggtcacagaatcattcttaggtaagagaataagggaaaatt |
34146303 |
T |
|
| Q |
213 |
tgtatggcaaaatagaatgagtagtatcatttgtttcagatgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaatctatc |
312 |
Q |
| |
|
||||||||||||||||| |||||||||| |||||||| | ||||||||||||| |||| ||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
34146302 |
tgtatggcaaaatagaaatagtagtatcagttgtttcaaaagagaagagaagttgaatatgttcggcacccttagcaattcctttggagatcaatctatc |
34146203 |
T |
|
| Q |
313 |
aacgacatccctgtgttcattgcctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggca |
412 |
Q |
| |
|
|| ||||||||| |||||||| | |||||||||||||||||| || |||| ||||||| |||||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
34146202 |
aatgacatccctatgttcattacataatggaaattttactcgaatggaacggatcatggcacctttataatggagcataaattgatccaatcttgtggca |
34146103 |
T |
|
| Q |
413 |
aattcagattgaaagtgaaacctttgaaagaggggaaggctttttggtaagccttgaattgtgttatagtcaaacattgtatggagatcaaagttgagtt |
512 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||||| ||| || ||| ||||| ||||||||||||| |||| |||| |||||| ||||| || | |
|
|
| T |
34146102 |
aattcagattgaaagtgaaacctttgacagagaggaaggatttgtgacaagtcttgatctgtgttatagtcagacatggtatagagatcgaagttaaggt |
34146003 |
T |
|
| Q |
513 |
ccgtctttaatccccattcgtgaatccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
|| || ||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
34146002 |
ccatccttaatccccattcgtgaatccattgtttggacaatgcactggtttt |
34145951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 15 - 564
Target Start/End: Complemental strand, 33860570 - 33860021
Alignment:
| Q |
15 |
catcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaagtt |
114 |
Q |
| |
|
|||||||||| ||||| ||||| || |||| || ||||||| | |||||| ||| ||| ||||||| || | | || ||||||||||||||||| || |
|
|
| T |
33860570 |
catcaagggttaagtcaacaaggtgtttgcactttgaacacaaagtctgaacgagtgtcttcttcacaataatttgttgtaacacaagagttctcaaatt |
33860471 |
T |
|
| Q |
115 |
ttttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgagagaatcattgtcagataagagagtaagggaaaatttg |
214 |
Q |
| |
|
|||||||| ||| |||| | |||| | || || |||||||||||||||| ||| || | ||||||||| | || ||||||| |||||||||||||| |
|
|
| T |
33860470 |
ttttaatcgagagaagtatctgggtttgactaagaggcagttttgtaggtgcaaataggtcacagaatcattctgaggtaagagaataagggaaaatttg |
33860371 |
T |
|
| Q |
215 |
tatggcaaaatagaatgagtagtatcatttgtttcagatgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaatctatcaa |
314 |
Q |
| |
|
||||||||||||||| |||||||||| |||||||||| ||||||||||||| |||| ||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
33860370 |
tatggcaaaatagaaatagtagtatcagttgtttcagaagagaagagaagttgaatatgttcggcacccttagcaattcctttggagatcaatctatcaa |
33860271 |
T |
|
| Q |
315 |
cgacatccctgtgttcattgcctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggcaaa |
414 |
Q |
| |
|
||||||||| |||||||| | |||||||||||||||||| || |||| ||||||| |||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
33860270 |
tgacatccctatgttcattacataatggaaattttactcgaatggaacggatcatggcacctttataatggagcataaattgatccaatcttgtggcaaa |
33860171 |
T |
|
| Q |
415 |
ttcagattgaaagtgaaacctttgaaagaggggaaggctttttggtaagccttgaattgtgttatagtcaaacattgtatggagatcaaagttgagttcc |
514 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||||| ||| || ||| ||||| ||||||||||||| |||| |||| |||||| ||||| || ||| |
|
|
| T |
33860170 |
ttcagattgaaagtgaaacctttgacagagaggaaggatttgtgacaagtcttgatctgtgttatagtcagacatggtatagagatcgaagttaaggtcc |
33860071 |
T |
|
| Q |
515 |
gtctttaatccccattcgtgaatccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
|| ||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
33860070 |
atccttaatccccattcgtgaatccattgtttggacaatgcactggtttt |
33860021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 95 - 564
Target Start/End: Original strand, 34181015 - 34181484
Alignment:
| Q |
95 |
aacacaagagttctcaagttttttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgagagaatcattgtcagata |
194 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| |||| | |||| | || || |||||||||||||||| ||| || | ||||||||| | || || |
|
|
| T |
34181015 |
aacacaagagttctcaaattttttaatcgagagaagtatctgggtttgactaagaggcagttttgtaggtgcaaataggtcacagaatcattcttaggta |
34181114 |
T |
|
| Q |
195 |
agagagtaagggaaaatttgtatggcaaaatagaatgagtagtatcatttgtttcagatgagaagagaagttcaatacgtttggcactcttagcaattcc |
294 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||||||| |||||||| | ||||||||||||| |||| ||| ||||| |||||||||||| |
|
|
| T |
34181115 |
agagaataagggaaaatttgtatggcaaaatagaaatagtagtatcagttgtttcaaaagagaagagaagttgaatatgttcggcacccttagcaattcc |
34181214 |
T |
|
| Q |
295 |
tttggagatcaatctatcaacgacatccctgtgttcattgcctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaat |
394 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |||||||| | |||||||||||||||||| || |||| ||||||| |||||||||||||||||| |||| |
|
|
| T |
34181215 |
tttggagatcaatctatcaatgacatccctatgttcattacataatggaaattttactcgaatggaacggatcatggcacctttataatggagcataaat |
34181314 |
T |
|
| Q |
395 |
tgatccaatctggtggcaaattcagattgaaagtgaaacctttgaaagaggggaaggctttttggtaagccttgaattgtgttatagtcaaacattgtat |
494 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| ||| || ||| ||||| ||||||||||||| |||| |||| |
|
|
| T |
34181315 |
tgatccaatcttgtggcaaattcagattgaaagtgaaacctttgacagagaggaaggatttgtgacaagtcttgatctgtgttatagtcagacatggtat |
34181414 |
T |
|
| Q |
495 |
ggagatcaaagttgagttccgtctttaatccccattcgtgaatccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
|||||| ||||| || ||| || ||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
34181415 |
agagatcgaagttaaggtccatccttaatccccattcgtgaatccattgtttggacaatgcactggtttt |
34181484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 15 - 564
Target Start/End: Original strand, 35073225 - 35073771
Alignment:
| Q |
15 |
catcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaagtt |
114 |
Q |
| |
|
|||||||| | |||||||||||||| ||||||| || ||||||||||||| |||||| || |||||| || |||||||||||||||||||||||| || |
|
|
| T |
35073225 |
catcaaggatcaagtctacaagatgggtgcaattggagcacagactctgaaccagtttcggcgtcacattaattagatgcaacacaagagttctcaaatt |
35073324 |
T |
|
| Q |
115 |
ttttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgagagaatcattgtcagataagagagtaagggaaaatttg |
214 |
Q |
| |
|
|| |||||||| ||| || | ||||| || ||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| |||| || |
|
|
| T |
35073325 |
attgaatccagagtagtccagatgttctgcactgaggtagttttgtaggtgcagataagtgagagaatcattgccagataagagagtagggggaaatatg |
35073424 |
T |
|
| Q |
215 |
tatggcaaaatagaatgagtagtatcatttgtttcagatgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaatctat--- |
311 |
Q |
| |
|
|||||||||| | ||| ||||||| |||||||||||||| |||||| ||| ||||||||||| ||||||||||||||||| |
|
|
| T |
35073425 |
tatggcaaaacaaaat------------------cagatgacaagagaagttcaattcgtttgacacccttagcaattcgtttggagatcaatctattaa |
35073506 |
T |
|
| Q |
312 |
---caac------gacatccctgtgttca---ttgcctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatc |
399 |
Q |
| |
|
|||| | |||||| ||||||| || |||||||||| || ||||||||||||||||| ||| ||||||||||||||||| ||||||||| |
|
|
| T |
35073507 |
tggcaacattaatggcatccccgtgttcagaatttactaatggaaaattgactcggattgaactgatgatgggacctttataatggagcataaattgatc |
35073606 |
T |
|
| Q |
400 |
caatctggtggcaaattcagattgaaagtgaaacctttgaaagaggggaaggctttttggtaagccttgaattgtgttatagtcaaacattgtatggaga |
499 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||| |||||||||| |||||| | ||||||||| ||||| ||||||||||||||||||| ||||| ||| |
|
|
| T |
35073607 |
caatcttgtggtaaattcagattgaaagtgaaatatttgaaagagtggaaggatgtttggtaagtcttgagttgtgttatagtcaaacatggtatgaaga |
35073706 |
T |
|
| Q |
500 |
tcaaagttgagttccgtctttaatccccattcgtgaatccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
||||||||||| |||||| |||||||||||||||||| ||||| ||| ||||||||||| ||||| |
|
|
| T |
35073707 |
tcaaagttgaggtccgtccttaatccccattcgtgaacccatcgtttagacaatgcactagtttt |
35073771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 15 - 564
Target Start/End: Original strand, 35099562 - 35100123
Alignment:
| Q |
15 |
catcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaagtt |
114 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||| || || ||||||||||| |||||| || |||||| || |||||||||||||||||||||||| || |
|
|
| T |
35099562 |
catcaagggtcaagtctacaagatgggtgcaattggagcagagactctgaagcagtttcggcgtcacattaattagatgcaacacaagagttctcaaatt |
35099661 |
T |
|
| Q |
115 |
ttttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgagagaatcattgtcagataagagagtaagggaaaatttg |
214 |
Q |
| |
|
|| |||||||| || || | ||||| || |||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| |||| || |
|
|
| T |
35099662 |
attgaatccagagtggtccagatgttctgcactgaggcagttttgtaggtgcagataagtgagagaatcattgccagataagagagtagggggaaatatg |
35099761 |
T |
|
| Q |
215 |
tatg-gcaaaata-gaatgagtagtatcatttgtttcagatgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaatctatc |
312 |
Q |
| |
|
|||| | ||||| | ||| | | || |||||||| |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
35099762 |
tatgggggaaatatgtatggcaa--aacaaaa---tcagatgacaagagaagttcaattcgtttgacacccttagcaattcctttggagatcaatctatt |
35099856 |
T |
|
| Q |
313 |
aacgaca------------tccctgtgttca---ttgcctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattga |
397 |
Q |
| |
|
|| | || |||| ||||||| || ||||||||||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||| |
|
|
| T |
35099857 |
aatggcaccattaatggcatccccgtgttcagaatttactaatggaaatttgactcggattgaactgatgatgggacctttataatggagcataaattga |
35099956 |
T |
|
| Q |
398 |
tccaatctggtggcaaattcagattgaaagtgaaacctttgaaagaggggaaggctttttggtaagccttgaattgtgttatagtcaaacattgtatgga |
497 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||| |||||||||| |||||| | ||||||||| |||||| |||||||||||||||||| ||||| | |
|
|
| T |
35099957 |
tccaatcttgtggtaaattcagattgaaagtgaaatatttgaaagagtggaaggatgtttggtaagtcttgaagtgtgttatagtcaaacatggtatgaa |
35100056 |
T |
|
| Q |
498 |
gatcaaagttgagttccgtctttaatccccattcgtgaatccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||||| ||||| || ||||||||||| ||||| |
|
|
| T |
35100057 |
gatcaaagttgaggtccgtccttaatccccattcgtgaacccatcgttcagacaatgcactagtttt |
35100123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 15 - 564
Target Start/End: Original strand, 35084261 - 35084822
Alignment:
| Q |
15 |
catcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaagtt |
114 |
Q |
| |
|
|||||||||| |||||||||||| | ||||||| || |||||||||||||| |||||| || |||||| || ||||||||||||| |||||||||| || |
|
|
| T |
35084261 |
catcaagggtcaagtctacaagacgggtgcaattggagcacagactctgaagcagtttcggcgtcacattaattagatgcaacacaggagttctcaaatt |
35084360 |
T |
|
| Q |
115 |
ttttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgagagaatcattgtcagataagagagtaagggaaaatttg |
214 |
Q |
| |
|
|| |||||||| ||| || | ||||| || |||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||| || |
|
|
| T |
35084361 |
attgaatccagagtagtccagatgttctgcactgaggcagttttgtaggtgcagataagtgagagaatcattgccagataagagagtaggggggaatatg |
35084460 |
T |
|
| Q |
215 |
tatg-gcaaaata-gaatgagtagtatcatttgtttcagatgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaatctat- |
311 |
Q |
| |
|
|||| | ||||| | ||| | | || |||||||| |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
35084461 |
tatgggggaaatatgtatggcaa--aacaaaa---tcagatgacaagagaagttcaattcgtttgacacccttagcaattcctttggagatcaatctatt |
35084555 |
T |
|
| Q |
312 |
-----caac------gacatccctgtgttca---ttgcctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattga |
397 |
Q |
| |
|
|||| | |||||| ||||||| || |||||||||| || ||||||||||||||||| ||| ||||||||||||||||| ||||||| |
|
|
| T |
35084556 |
aatggcaacattaatggcatccccgtgttcagaatttactaatggaaaattgactcggattgaactgatgatgggacctttataatggagcataaattga |
35084655 |
T |
|
| Q |
398 |
tccaatctggtggcaaattcagattgaaagtgaaacctttgaaagaggggaaggctttttggtaagccttgaattgtgttatagtcaaacattgtatgga |
497 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||| |||||||||| |||||| | ||||||||| ||||||||||||||||||||||||| ||||| | |
|
|
| T |
35084656 |
tccaatcttgtggtaaattcagattgaaagtgaaatatttgaaagagtggaaggatgtttggtaagtcttgaattgtgttatagtcaaacatggtatgaa |
35084755 |
T |
|
| Q |
498 |
gatcaaagttgagttccgtctttaatccccattcgtgaatccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
||||||||||||| |||| | |||||||||||||||||| ||||| ||| ||||||||||| ||||| |
|
|
| T |
35084756 |
gatcaaagttgaggtccgcccttaatccccattcgtgaacccatcgtttagacaatgcactagtttt |
35084822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 336 - 564
Target Start/End: Original strand, 35083622 - 35083847
Alignment:
| Q |
336 |
ctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggcaaattcagattgaaagtgaaacct |
435 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| || || |
|
|
| T |
35083622 |
ctaatggaaattttactcggattgaatggatgatggcacctttataatggagcataaattgatccaatcttgtggcaaattcagattgaaagtgtaatct |
35083721 |
T |
|
| Q |
436 |
ttgaaagaggggaaggctttttggtaagccttgaattgtgttatagtcaaacattgtatggagatcaaagttgagttccgtctttaatccccattcgtga |
535 |
Q |
| |
|
|||| | || |||| | ||||||| |||| ||||||||| |||||||||| ||||| |||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
35083722 |
ttgatatagtggaaatgtgtttggta---cttggattgtgttagagtcaaacatggtatgaagatcaaagttgaggtccgtccttaatccccattcgtga |
35083818 |
T |
|
| Q |
536 |
atccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
| ||||| ||||||||||||||| ||||| |
|
|
| T |
35083819 |
acccatcgtttggacaatgcactagtttt |
35083847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 236 - 425
Target Start/End: Complemental strand, 43027400 - 43027207
Alignment:
| Q |
236 |
gtatcatttgtttcagatgagaagagaagttcaatacgtttggcactctt----agcaattcctttggagatcaatctatcaacgacatccctgtgttca |
331 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |||||| | | ||| ||||||||||||||||||||||||||||| | ||||||| |||||| |
|
|
| T |
43027400 |
gtatcatttgtttcagatgacaagagaagttcaattcgtttgacccccttagcaagcaattcctttggagatcaatctatcaatggcatccctatgttca |
43027301 |
T |
|
| Q |
332 |
ttgcctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggcaaattcagattgaa |
425 |
Q |
| |
|
|| |||||||||||||||||||||||||||| ||| ||| |||||||||||||||||| ||||||||| |||| |||||||||| |||||||| |
|
|
| T |
43027300 |
ttacctaatggaaattttactcggattgaacggatgatggcacctttataatggagcataaattgatcgaatcctgtggcaaattgagattgaa |
43027207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 16 - 507
Target Start/End: Original strand, 38157606 - 38158100
Alignment:
| Q |
16 |
atcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaagttt |
115 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| ||| ||| || |||||| || || || | ||||| |||||| |||||||||||||||||||| || |
|
|
| T |
38157606 |
atcaagggtgaagtctacaagatggttgcaatttgaaaacaaaccctgaagcagattttgatgcacatgaactagttgcaacacaagagttctcaaattc |
38157705 |
T |
|
| Q |
116 |
tttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgagagaatcattgtcagataagagagtaagggaaaatttgt |
215 |
Q |
| |
|
|| |||||||| |||| | |||| ||| || || || ||||||||||| ||||| |||||||| | | |||| |||||||||||| |||||| |||| |
|
|
| T |
38157706 |
ttcaatccagagaagtcaagaggtgctactaggaggcaattttgtaggtgaagataagtgagagagttagtgtccaataagagagtaaaggaaaacttgt |
38157805 |
T |
|
| Q |
216 |
atggcaaaat---------agaatgagtagtatcatttgtttcagatgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaa |
306 |
Q |
| |
|
|| || || | ||||| | | |||||| ||||||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
38157806 |
atagctctattcgacgcaaaaaatgacttggatcattagtttcagatgagaagagcaattcaatacgtttggcacccttagcaattcctttggtaatcat |
38157905 |
T |
|
| Q |
307 |
tctatcaacgacatccctgtgttcattgcctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctg |
406 |
Q |
| |
|
||| |||| | ||| ||| || | ||||||||||| ||| |||||||||||| |||||||| |||| | |||| |||| |||||||||||||| |
|
|
| T |
38157906 |
tctgtcaatggaatcattgtatttaggacctaatggaaaacttagtcggattgaactaatcatgtcgccttgaaaatgcagcatgaattgatccaatctt |
38158005 |
T |
|
| Q |
407 |
gtggcaaattcagattgaaagtgaaacctttgaaagaggggaaggctttttggtaagccttgaattgtgttatagtcaaacattgtatggagatcaaagt |
506 |
Q |
| |
|
|||||||||||||| ||||||| ||||| ||| ||||| |||| |||||| |||||| ||| ||| |||||||||| ||||||||||||||| |
|
|
| T |
38158006 |
ttggcaaattcagat------tgaaacccttgaaggagcggaagactttgtggtaactcttgaactgtattagagtcaaacatgttatggagatcaaagt |
38158099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 326 - 564
Target Start/End: Original strand, 45585156 - 45585378
Alignment:
| Q |
326 |
tgttcattgcctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggcaaattcagattgaa |
425 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| |||| ||||||| |||||||| | ||||||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
45585156 |
tgttcattacctaatggaaattttactcggatggaac-gatcatggcacctttacagtggagcataaattgatccaatcttgtggcaaattcagattgaa |
45585254 |
T |
|
| Q |
426 |
agtgaaacctttgaaagaggggaaggctttttggtaagccttgaattgtgttatagtcaaacattgtatggagatcaaagttgagttccgtctttaatcc |
525 |
Q |
| |
|
|| || |||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||| || ||| || ||||||| |
|
|
| T |
45585255 |
ag---------------agtggaaggctttttggtaagtcttgaattgtgttatagtcaaacatggtatggtgatcaaagttaaggtccatccttaatcc |
45585339 |
T |
|
| Q |
526 |
ccattcgtgaatccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
||| || ||||||||| |||||| |||||||||||||| |
|
|
| T |
45585340 |
ccaatcatgaatccattgtttggataatgcacttgtttt |
45585378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 16 - 510
Target Start/End: Original strand, 38149862 - 38150364
Alignment:
| Q |
16 |
atcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaaga---gttctcaag |
112 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||| ||| ||| || |||||| || || || ||||||| || ||| |||||||||||| |||||||| |
|
|
| T |
38149862 |
atcaagggtgaagtttacaagatgaatgcaatttgaaaacaaaccctgaagtagattttgattcacattaagtagttgcaacacaagaagagttctcaaa |
38149961 |
T |
|
| Q |
113 |
ttttttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgagagaatcattgtcagataagagagtaagggaaaatt |
212 |
Q |
| |
|
|| || ||||| || || | | |||| ||| || || |||||||||| ||||| |||||||||||| |||| ||||||||||||| |||||||| |
|
|
| T |
38149962 |
ttcttgaatcctgagaaatcaaaaggtgctagtaggtagcaactttgtaggtgaagataagtgagagaatcagtgtccgataagagagtaaaggaaaatt |
38150061 |
T |
|
| Q |
213 |
tgtatggcaaaataga------------atgagtagtatcatttgtttcagatgagaagagaagttcaatacgtttggcactcttagcaattcctttgga |
300 |
Q |
| |
|
||||| ||||| || | || | | | |||||| ||||||||||||||||| | ||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
38150062 |
tgtatagcaaactatatggatacaaaaaattaattggatcattagtttcagatgagaagagcaattcaatacgtttggcacccttagtaattcctttgga |
38150161 |
T |
|
| Q |
301 |
gatcaatctatcaacgacatccctgtgttcattgcctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatcc |
400 |
Q |
| |
|
|||| ||| |||| |||| |||||| | ||||||||||| ||||||||||||||||| ||||| ||| ||| |||||| |||| ||||||||| |
|
|
| T |
38150162 |
aatcattctgtcaattgcatct-tgtgtttagaacctaatggaaaatttactcggattgaactaatcatatcatcttgataatgcagcatgaattgatcc |
38150260 |
T |
|
| Q |
401 |
aatctggtggcaaattcagattgaaagtgaaacctttgaaagaggggaaggctttttggtaagccttgaattgtgttatagtcaaacattgtatggagat |
500 |
Q |
| |
|
||||| |||||||||||||| ||||||| ||||| ||| ||||||||||| ||||| |||||| ||| ||| |||||||||| ||||||||| |
|
|
| T |
38150261 |
aatcttttggcaaattcagat------tgaaacccttgaaggagtggaaggcttttcggtaactcttgaactgtattagagtcaaacatgttatggagat |
38150354 |
T |
|
| Q |
501 |
caaagttgag |
510 |
Q |
| |
|
|||| ||||| |
|
|
| T |
38150355 |
caaaattgag |
38150364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 237 - 564
Target Start/End: Original strand, 38166734 - 38167061
Alignment:
| Q |
237 |
tatcatttgtttcagatgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaatctatcaacgacatccctgtgttcattgcc |
336 |
Q |
| |
|
|||| ||||||||| |||| || ||||||||||||| |||||| | |||||| ||||||| ||| ||||||||| ||| ||| || | ||||| || |
|
|
| T |
38166734 |
tatcgtttgtttcatatgacaatagaagttcaatacttttggctcccttagcgattccttgggaaatcaatctaccaatgaccgatctatattcatcacc |
38166833 |
T |
|
| Q |
337 |
taatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggcaaattcagattgaaagtgaaacctt |
436 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||| ||| ||| |||||| |||| |||||||||||||| |||||||||||||| ||||||| | |
|
|
| T |
38166834 |
taatggaaaatttactcggattgaactaatcatatcatcttgataatgcagcatgaattgatccaatcttttggcaaattcagat------tgaaaccct |
38166927 |
T |
|
| Q |
437 |
tgaaagaggggaaggctttttggtaagccttgaattgtgttatag------tcaaacattgtatggagatcaaagttgagttccgtctttaatccccatt |
530 |
Q |
| |
|
|||| ||| ||||||||||| ||||| |||||| ||| |||||| |||||||| | |||||||||||||| || ||| || |||||| ||||| |
|
|
| T |
38166928 |
tgaaggagtggaaggcttttcggtaactcttgaactgtattatagcgaagttcaaacatgttttggagatcaaagtttaggtccatccttaatctccatt |
38167027 |
T |
|
| Q |
531 |
cgtgaatccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
| |||| ||| | |||||||||||||| ||||| |
|
|
| T |
38167028 |
cctgaagccaccgcttggacaatgcactggtttt |
38167061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 85 - 427
Target Start/End: Complemental strand, 37883682 - 37883330
Alignment:
| Q |
85 |
aactagatgcaacacaagagttctcaagttttttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgagagaatca |
184 |
Q |
| |
|
|||||| | |||||||||||||||||| || || |||||||| || | ||||||| ||| || ||||||||||||||| ||||||||| |||||||| |
|
|
| T |
37883682 |
aactagtttcaacacaagagttctcaaattcttcaatccagaaaattccataggtgctactaggcgacagttttgtaggtacagatacgttagagaatcg |
37883583 |
T |
|
| Q |
185 |
ttgtcagataagagagtaagggaaaatttgtatgg---------caaaatagaatgagtagtatcatttgtttcagatgagaagagaagttcaatacgtt |
275 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||| ||||||| ||| ||||||| | || | |||||||||| |||||||||||| |
|
|
| T |
37883582 |
gtgtcagataagagagtaaaggaaaatttgtatggctctagattcaaaataaaat---aagtatcactaattatatatgagaagagtggttcaatacgtt |
37883486 |
T |
|
| Q |
276 |
tggcactcttagcaattcctttgg----agatcaatctatcaacgacatccctgtgttcattgcctaatggaaattttactcggattgaactgatcatgt |
371 |
Q |
| |
|
|| ||| |||||||| |||||||| ||||||| ||||| |||||| ||||||||| ||||||||||| || | ||||||||||||||||||| |
|
|
| T |
37883485 |
tgacacccttagcaactcctttggtaatcaatcaatcaatcaatgacatctttgtgttcatcacctaatggaaaattgagtcggattgaactgatcatgg |
37883386 |
T |
|
| Q |
372 |
cacctttataatggagcacaaattgatccaatctggtggcaaattcagattgaaag |
427 |
Q |
| |
|
||||| || ||| |||| |||||||||||||| ||| ||| ||||||| |||| |
|
|
| T |
37883385 |
taccttgatgatgcagcatgaattgatccaatcttgtgtaaaaatcagattcaaag |
37883330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 21 - 230
Target Start/End: Complemental strand, 43027788 - 43027589
Alignment:
| Q |
21 |
gggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaagttttttaa |
120 |
Q |
| |
|
|||| |||||||||||||| ||||||| || |||||||||||||| | |||| || |||||| ||||||||||||||||||| ||||||| ||||| || |
|
|
| T |
43027788 |
gggtcaagtctacaagatgtgtgcaattggagcacagactctgaagcaatttccgcgtcacataaactagatgcaacacaagaattctcaaatttttgaa |
43027689 |
T |
|
| Q |
121 |
tccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgagagaatcattgtcagataagagagtaagggaaaatttgtatggc |
220 |
Q |
| |
|
||||| |||||||| || || || ||||||||||||||||| || ||||||||| ||||||||| |||||||||| ||||||||||||| |
|
|
| T |
43027688 |
tccag----------aggttctactaggaggcacttttgtaggtgcagatatgtcggagaatcatagtcagataaaagagtaaggggaaatttgtatggc |
43027599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 253 - 426
Target Start/End: Original strand, 38187985 - 38188158
Alignment:
| Q |
253 |
tgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaatctatcaacgacatccctgtgttcattgcctaatggaaattttact |
352 |
Q |
| |
|
||||||||| | ||||||||||| || || |||||||||||||||||| |||| ||| |||| |||| | ||||||| | | |||||||||| |||||| |
|
|
| T |
38187985 |
tgagaagagcaattcaatacgttcggaacccttagcaattcctttggaaatcactctgtcaatgacaacactgtgtttagtatctaatggaaaatttact |
38188084 |
T |
|
| Q |
353 |
cggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggcaaattcagattgaaa |
426 |
Q |
| |
|
|| | ||||| ||| || |||||| |||||| |||| |||||||||||||| ||| |||||||||||||||| |
|
|
| T |
38188085 |
cgaactgaacggatgatagcaccttgataatgtagcatgaattgatccaatcttgtgacaaattcagattgaaa |
38188158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 38187745 - 38187862
Alignment:
| Q |
14 |
tcatcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaagt |
113 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||| ||| | |||| ||||| | || || | |||||||||||| |||||||||||||||||||| | |
|
|
| T |
38187745 |
tcatcaagggtgaagtctacaagatgaatgcaatttgaaaatagaccatgaagcaaattttgatgcacatcaactagttgcaacacaagagttctcaaat |
38187844 |
T |
|
| Q |
114 |
tttttaatccagataagt |
131 |
Q |
| |
|
| || |||||||| |||| |
|
|
| T |
38187845 |
tcttgaatccagacaagt |
38187862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 33862498 - 33862380
Alignment:
| Q |
13 |
atcatcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaag |
112 |
Q |
| |
|
|||||||||||||||||| ||||| || |||| || ||||||| | ||| ||| ||| ||| ||||||||||||| | || ||||||||||||||||| |
|
|
| T |
33862498 |
atcatcaagggtgaagtcaacaaggtgtttgcactttgaacacaaagtcttaaggagtgtcttcttcacatcaacttgttgtaacacaagagttctcaaa |
33862399 |
T |
|
| Q |
113 |
ttttttaatccagataagt |
131 |
Q |
| |
|
|||||||||| ||| |||| |
|
|
| T |
33862398 |
ttttttaatcgagagaagt |
33862380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 34178881 - 34178999
Alignment:
| Q |
13 |
atcatcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaag |
112 |
Q |
| |
|
|||||||||||||||||| ||||| || |||| || ||||||| | ||| ||| ||| ||| ||||||||||||| | || ||||||||||||||||| |
|
|
| T |
34178881 |
atcatcaagggtgaagtcaacaaggtgtttgcactttgaacacaaagtcttaaggagtgtcttcttcacatcaacttgttgtaacacaagagttctcaaa |
34178980 |
T |
|
| Q |
113 |
ttttttaatccagataagt |
131 |
Q |
| |
|
|||||||||| ||| |||| |
|
|
| T |
34178981 |
ttttttaatcgagagaagt |
34178999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 250 - 311
Target Start/End: Original strand, 35083521 - 35083582
Alignment:
| Q |
250 |
agatgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaatctat |
311 |
Q |
| |
|
|||||| |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
35083521 |
agatgacaagagaagttcaattcgtttgacacccttagcaattcctttggagatcaatctat |
35083582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 34180836 - 34180954
Alignment:
| Q |
13 |
atcatcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaag |
112 |
Q |
| |
|
|||||||||||||||||| ||||| || ||||||| ||||||| | |||||| |||| | | ||||||| |||| | || ||||||||||||||||| |
|
|
| T |
34180836 |
atcatcaagggtgaagtcaacaaggtgtttgcaatttgaacacaaagtctgaacaagtgtattcttcacaataacttgttgtaacacaagagttctcaaa |
34180935 |
T |
|
| Q |
113 |
ttttttaatccagataagt |
131 |
Q |
| |
|
|||||||||| ||| |||| |
|
|
| T |
34180936 |
ttttttaatcgagagaagt |
34180954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 15 - 206
Target Start/End: Original strand, 35083301 - 35083495
Alignment:
| Q |
15 |
catcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaagtt |
114 |
Q |
| |
|
|||||||||| |||||||||||||| | ||| | || |||| |||||||| |||||| || ||||| || ||||| ||||||||||||| |||| || |
|
|
| T |
35083301 |
catcaagggtcaagtctacaagatgggtccaaatggagcacatactctgaaccagtttcggcgtcacagaaattagatccaacacaagagttgtcaaatt |
35083400 |
T |
|
| Q |
115 |
ttttaatccag---ataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgagagaatcattgtcagataagagagtaaggg |
206 |
Q |
| |
|
|| ||||||| | ||| | ||||||| || || |||| ||| ||||||||||| |||||||||| |||| |||||||||||||||||| |
|
|
| T |
35083401 |
attgaatccagtgcagtagtcaagaggttctgcaacgaggcagtcttgcaggtgcagatatgtgagagaatgattgccagataagagagtaaggg |
35083495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 252 - 564
Target Start/End: Original strand, 38173315 - 38173627
Alignment:
| Q |
252 |
atgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaatctatcaacgacatccctgtgttcattgcctaatggaaattttac |
351 |
Q |
| |
|
|||||||||| ||||||||||||| ||| |||||||||||||||| | |||| | | |||| |||||| || |||| ||| ||||||||||| | || |
|
|
| T |
38173315 |
atgagaagagcagttcaatacgttccacacccttagcaattcctttgaaaatcattttgtcaatgacatcactatgttgattacctaatggaaaatccac |
38173414 |
T |
|
| Q |
352 |
tcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggcaaattcagattgaaa-gtgaaacctttgaaagagg----g |
446 |
Q |
| |
|
||| | ||||| ||||||||||||| || | |||| ||| |||||| ||| ||||| ||||| |||||||| || ||| |||| || | |
|
|
| T |
38173415 |
tcgaagtgaacggatcatgtcacctcgatgtttcagcatgaatcgatccattcttgtggcgaattccgattgaaacgtt-----tttaaaagtggaactg |
38173509 |
T |
|
| Q |
447 |
gaaggctttttggtaagccttgaattgtgttatagtcaaacattgtatggagatcaaagttgagttccgtctttaatccccattcgtgaatccatctttt |
546 |
Q |
| |
|
| ||| ||| |||||| |||||| ||| |||||||||||||| ||||||||||||| ||||| || | || ||| |||||| |||| ||||| ||| |
|
|
| T |
38173510 |
gcaggttttgtggtaattcttgaagtgtattatagtcaaacatgttatggagatcaaaattgaggtcaattcttgatctccattcatgaagccatcgttt |
38173609 |
T |
|
| Q |
547 |
ggacaatgcacttgtttt |
564 |
Q |
| |
|
||||||| |||||||||| |
|
|
| T |
38173610 |
ggacaatacacttgtttt |
38173627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 13 - 139
Target Start/End: Original strand, 38173079 - 38173205
Alignment:
| Q |
13 |
atcatcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaag |
112 |
Q |
| |
|
||||| |||||||||||||||||||||| |||| | || ||| || |||||| | | |||||| ||| |||| ||||||||||||||||||||||| |
|
|
| T |
38173079 |
atcattaagggtgaagtctacaagatgaatgcagctggacaacataccctgaagcaaatcctgctttacaacaacaagatgcaacacaagagttctcaaa |
38173178 |
T |
|
| Q |
113 |
ttttttaatccagataagttcataggt |
139 |
Q |
| |
|
|| || || |||||||| || |||||| |
|
|
| T |
38173179 |
ttattgaaaccagataaatttataggt |
38173205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 455 - 506
Target Start/End: Complemental strand, 43027195 - 43027144
Alignment:
| Q |
455 |
tttggtaagccttgaattgtgttatagtcaaacattgtatggagatcaaagt |
506 |
Q |
| |
|
||||||| | ||||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
43027195 |
tttggtaggtcttgaattgtgttatagtcaaacatggtatgaagatcaaagt |
43027144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 478 - 564
Target Start/End: Original strand, 38286589 - 38286675
Alignment:
| Q |
478 |
atagtcaaacattgtatggagatcaaagttgagttccgtctttaatccccattcgtgaatccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
||||||| ||| ||||| | |||||||||||| ||| || | |||||||||||||||| |||| |||||||||| |||||||||| |
|
|
| T |
38286589 |
atagtcacacaaggtatgaatatcaaagttgaggtccatcctgaatccccattcgtgaagccatagtttggacaatacacttgtttt |
38286675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 265 - 422
Target Start/End: Original strand, 38286391 - 38286548
Alignment:
| Q |
265 |
ttcaatacgtttggcactcttagcaattcctttggagatcaatctatcaacgacatccctgtgttcattgcctaatggaaattttactcggattgaactg |
364 |
Q |
| |
|
||||| ||||||| | | |||||||||| ||||||| |||| || || | |||| | |||||| | | ||||||||||| || ||||||||| | | |
|
|
| T |
38286391 |
ttcaagacgtttgactcccttagcaattactttggaaatcatcctttcgatgacaccagtgtgtttagtacctaatggaaacactagtcggattgaccgg |
38286490 |
T |
|
| Q |
365 |
atcatgtcacctttataatggagcacaaattgatccaatctggtggcaaattcagatt |
422 |
Q |
| |
|
||||||||||||| |||||| |||| |||||||||| ||| | || ||||||||||| |
|
|
| T |
38286491 |
atcatgtcaccttgataatgcagcatgaattgatccactcttgcggtaaattcagatt |
38286548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 38166667 - 38166711
Alignment:
| Q |
176 |
agagaatcattgtcagataagagagtaagggaaaatttgtatggc |
220 |
Q |
| |
|
||||||||| ||| |||||||||||| | |||||||||||||||| |
|
|
| T |
38166667 |
agagaatcagtgtgagataagagagtcatggaaaatttgtatggc |
38166711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0176 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: scaffold0176
Description:
Target: scaffold0176; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 15 - 564
Target Start/End: Original strand, 23480 - 24029
Alignment:
| Q |
15 |
catcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaagtt |
114 |
Q |
| |
|
|||||||||||| ||| ||||| || ||||||| ||||||| | ||| ||| ||| ||| ||||||| |||| | |||||||||||||||||||| || |
|
|
| T |
23480 |
catcaagggtgaggtcaacaaggtggttgcaatttgaacacaaagtcttaaggagtgtcttcttcacaaaaacttgttgcaacacaagagttctcaaatt |
23579 |
T |
|
| Q |
115 |
ttttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgagagaatcattgtcagataagagagtaagggaaaatttg |
214 |
Q |
| |
|
|||||||||||| |||| | |||| || || |||||||||||||||| ||| || | ||||||||| ||| ||||||| ||||||||||| || |
|
|
| T |
23580 |
ttttaatccagagaagtatctgggtttgtctatgaggcagttttgtaggtgcaaataggtcacagaatcattctcaagtaagagaataagggaaaatctg |
23679 |
T |
|
| Q |
215 |
tatggcaaaatagaatgagtagtatcatttgtttcagatgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaatctatcaa |
314 |
Q |
| |
|
||||||| ||||||| |||||||||| |||||| ||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
23680 |
tatggcataatagaaatagtagtatcagttgtttaagaagagaagagaagttcaatatgtttggcacccttagcaattcctttggagatcaatctatcaa |
23779 |
T |
|
| Q |
315 |
cgacatccctgtgttcattgcctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggcaaa |
414 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||||||| || |||| ||| ||| |||||||||||||||||| |||||||||||| || |||||||| |
|
|
| T |
23780 |
tgacatccctatgttcattacctaatggaaattttactcgaatggaacggataatgacacctttataatggagcataaattgatccaaacttgtggcaaa |
23879 |
T |
|
| Q |
415 |
ttcagattgaaagtgaaacctttgaaagaggggaaggctttttggtaagccttgaattgtgttatagtcaaacattgtatggagatcaaagttgagttcc |
514 |
Q |
| |
|
|| ||||||| |||||||||||||| |||| |||| | ||| ||||||| ||||| |||||||||||||||||| |||| |||||| ||||| || ||| |
|
|
| T |
23880 |
tttagattgatagtgaaacctttgagagagaggaacgatttgtggtaagtcttgatctgtgttatagtcaaacatggtatagagatcgaagtttaggtcc |
23979 |
T |
|
| Q |
515 |
gtctttaatccccattcgtgaatccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
|| |||||||||||| ||||||||| ||||||||||||||| ||||| |
|
|
| T |
23980 |
atccgtaatccccattcatgaatccattgtttggacaatgcactggtttt |
24029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 218; Significance: 1e-119; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 15 - 564
Target Start/End: Complemental strand, 26003014 - 26002465
Alignment:
| Q |
15 |
catcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaagtt |
114 |
Q |
| |
|
|||||||||||| ||| ||||| || ||||||| ||||||| | ||| ||| ||| ||| ||||||| |||| | |||||||||||||||||||| || |
|
|
| T |
26003014 |
catcaagggtgaggtcaacaaggtggttgcaatttgaacacaaagtcttaaggagtgtcttcttcacaaaaacttgttgcaacacaagagttctcaaatt |
26002915 |
T |
|
| Q |
115 |
ttttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgagagaatcattgtcagataagagagtaagggaaaatttg |
214 |
Q |
| |
|
|||||||||||| |||| | ||| || || |||||||||||||||| ||| || | ||||||||| ||| ||||||| ||||||||||| || |
|
|
| T |
26002914 |
ttttaatccagagaagtatctgcgtttgtctatgaggcagttttgtaggtgcaaataggtcacagaatcattctcaagtaagagaataagggaaaatctg |
26002815 |
T |
|
| Q |
215 |
tatggcaaaatagaatgagtagtatcatttgtttcagatgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaatctatcaa |
314 |
Q |
| |
|
||||||| ||||||| |||||||| | |||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
26002814 |
tatggcataatagaaatagtagtattagttgtttcagaagagaagagaagttcaatatgtttggcaccattagcaattcctttggagatcaatctatcaa |
26002715 |
T |
|
| Q |
315 |
cgacatccctgtgttcattgcctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggcaaa |
414 |
Q |
| |
|
||||||||| |||||||| | |||||||||||||||||| || |||| ||| ||| |||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
26002714 |
tgacatccctatgttcattacataatggaaattttactcgaatggaacggatgatggcacctttataatggagcataaattgatccaatcttgtggcaaa |
26002615 |
T |
|
| Q |
415 |
ttcagattgaaagtgaaacctttgaaagaggggaaggctttttggtaagccttgaattgtgttatagtcaaacattgtatggagatcaaagttgagttcc |
514 |
Q |
| |
|
||||||||||||||||||| ||||| |||| ||| || ||| || ||| ||||| |||||||||||| |||| |||| |||||| ||||| || ||| |
|
|
| T |
26002614 |
ttcagattgaaagtgaaacatttgagagagaggacggatttgtgacaagtcttgatctgtgttatagtcggacatggtatagagatcgaagttaaggtcc |
26002515 |
T |
|
| Q |
515 |
gtctttaatccccattcgtgaatccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
| ||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
26002514 |
acccttaatccccattcgtgaatccattgtttggacaatgcactggtttt |
26002465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 15 - 564
Target Start/End: Complemental strand, 25563531 - 25562980
Alignment:
| Q |
15 |
catcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaagtt |
114 |
Q |
| |
|
|||||||||||| ||| ||||| || ||||||| ||||||| | ||| ||| ||| ||| ||||||| |||| | |||||||||||||||||||| || |
|
|
| T |
25563531 |
catcaagggtgaggtcaacaaggtggttgcaatttgaacacaaagtcttaaggagtgtcttcttcacaaaaacttgttgcaacacaagagttctcaaatt |
25563432 |
T |
|
| Q |
115 |
ttttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgagagaatcattgtcagataagagagtaagggaaaatttg |
214 |
Q |
| |
|
|||||||||||| |||| | |||| || || |||||||||||||||| ||| || | ||||||||| ||| ||||||| ||||||||||| || |
|
|
| T |
25563431 |
ttttaatccagagaagtatctgggtttgtctatgaggcagttttgtaggtgcaaataggtcacagaatcattctcaagtaagagaataagggaaaatctg |
25563332 |
T |
|
| Q |
215 |
tatggcaaaatagaatgagtagtatcatttgtttcagatgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaatctatcaa |
314 |
Q |
| |
|
||||||| ||||||| |||||||||| |||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
25563331 |
tatggcataatagaaatagtagtatcagttgtttcagaagagaagagaagttcaatatgtttggcacccttagcaattcctttggagatcaatctatgaa |
25563232 |
T |
|
| Q |
315 |
cgacatccctgtgttcattgcctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggcaaa |
414 |
Q |
| |
|
||||||||| |||| ||| | |||||||||||||||||| || |||| ||| ||| ||||||||||||| |||| ||||||||||||||| |||| ||| |
|
|
| T |
25563231 |
tgacatccctatgttgattacataatggaaattttactcgaatggaacggatgatggcacctttataatgcagcataaattgatccaatcttgtggaaaa |
25563132 |
T |
|
| Q |
415 |
ttcagattgaaagtgaaaccttt--gaaagaggggaaggctttttggtaagccttgaattgtgttatagtcaaacattgtatggagatcaaagttgagtt |
512 |
Q |
| |
|
||||||||||||||||||||||| || |||| |||||| ||| || ||| ||||| |||||||||||| |||| |||| |||||| ||||| || | |
|
|
| T |
25563131 |
ttcagattgaaagtgaaacctttgagagagagaggaaggatttgtgacaagtcttgatctgtgttatagtcggacatggtatagagatcgaagttaaggt |
25563032 |
T |
|
| Q |
513 |
ccgtctttaatccccattcgtgaatccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
|| || ||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
25563031 |
ccatccttaatccccattcgtgaatccattgtttggacaatgcactggtttt |
25562980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 152 - 564
Target Start/End: Complemental strand, 25569009 - 25568597
Alignment:
| Q |
152 |
cagttttgtaggtgcagatacgtgagagaatcattgtcagataagagagtaagggaaaatttgtatggcaaaatagaatgagtagtatcatttgtttcag |
251 |
Q |
| |
|
|||||||||||||||| ||| || | ||||||||| ||| ||||||| ||||||||||| ||||||||| ||||||| |||||||||| ||||||||| |
|
|
| T |
25569009 |
cagttttgtaggtgcaaataggtcacagaatcattctcaagtaagagaataagggaaaatctgtatggcataatagaaatagtagtatcagttgtttcag |
25568910 |
T |
|
| Q |
252 |
atgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaatctatcaacgacatccctgtgttcattgcctaatggaaattttac |
351 |
Q |
| |
|
| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || ||||||||| |||||||| | ||||||||||||||| |
|
|
| T |
25568909 |
aagagaagagaagttcaatatgtttggcacccttagcaattcctttggagatcaatctatgaatgacatccctatgttcattacataatggaaattttac |
25568810 |
T |
|
| Q |
352 |
tcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggcaaattcagattgaaagtgaaacctttgaaagaggggaagg |
451 |
Q |
| |
|
||| || |||| ||| ||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
25568809 |
tcgaatggaacggatgatggcacctttataatggagcataaattgatccaatcttgtggcaaattcagattgaaagtgaaacctttgagagagaggaagg |
25568710 |
T |
|
| Q |
452 |
ctttttggtaagccttgaattgtgttatagtcaaacattgtatggagatcaaagttgagttccgtctttaatccccattcgtgaatccatcttttggaca |
551 |
Q |
| |
|
||| || ||| ||||| |||||||||||| |||| |||| |||||| ||||| || ||| || ||||||||||||||||||||||| |||||||| |
|
|
| T |
25568709 |
atttgtgacaagtcttgatctgtgttatagtcggacatggtatagagatcgaagttaaggtccatccttaatccccattcgtgaatccattgtttggaca |
25568610 |
T |
|
| Q |
552 |
atgcacttgtttt |
564 |
Q |
| |
|
||||||| ||||| |
|
|
| T |
25568609 |
atgcactggtttt |
25568597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 15 - 564
Target Start/End: Complemental strand, 26103043 - 26102492
Alignment:
| Q |
15 |
catcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaagtt |
114 |
Q |
| |
|
|||||||||||| ||| ||||| || ||||||| ||||||| | ||| ||| ||| ||| ||||||| |||| | |||||||||||||||||||| || |
|
|
| T |
26103043 |
catcaagggtgaggtcaacaaggtggttgcaatttgaacacaaagtcttaaggagtgtcttcttcacaaaaacttgttgcaacacaagagttctcaaatt |
26102944 |
T |
|
| Q |
115 |
ttttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgagagaatcattgtcagataagagagtaagggaaaatttg |
214 |
Q |
| |
|
|||||||||||| |||| | |||| || || |||||||||||||||| ||| || | ||||||||| ||| ||||||| ||||||||||| || |
|
|
| T |
26102943 |
ttttaatccagagaagtatctgggtttgtctatgaggcagttttgtaggtgcaaataggtcacagaatcattctcaagtaagagaataagggaaaatctg |
26102844 |
T |
|
| Q |
215 |
tatggcaaaatagaatgagtagtatcatttgtttcagatgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaatctatcaa |
314 |
Q |
| |
|
||||||| ||||||| |||||||||| |||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
26102843 |
tatggcataatagaaatagtagtatcagttgtttcagaagagaagagaagttcaatatgtttggcacccttagcaattcctttggagatcaatctatgaa |
26102744 |
T |
|
| Q |
315 |
cgacatccctgtgttcattgcctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggcaaa |
414 |
Q |
| |
|
||||||||| |||| ||| | |||||||||||||||||| || |||| ||| ||| ||||||||||||| |||| ||||||||||||||| |||| ||| |
|
|
| T |
26102743 |
tgacatccctatgttgattacataatggaaattttactcgaatggaacggatgatggcacctttataatgcagcataaattgatccaatcttgtggaaaa |
26102644 |
T |
|
| Q |
415 |
ttcagattgaaagtgaaaccttt--gaaagaggggaaggctttttggtaagccttgaattgtgttatagtcaaacattgtatggagatcaaagttgagtt |
512 |
Q |
| |
|
||||||||||||||||||||||| || |||| |||||| ||| || ||| ||||| |||||||||||| |||| |||| |||||| ||||| || | |
|
|
| T |
26102643 |
ttcagattgaaagtgaaacctttgagagagagaggaaggatttgtgacaagtcttgatctgtgttatagtcggacatggtatagagatcgaagttaaggt |
26102544 |
T |
|
| Q |
513 |
ccgtctttaatccccattcgtgaatccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
|| || ||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
26102543 |
ccatccttaatccccattcgtgaatccattgtttggacaatgcactggtttt |
26102492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 78 - 423
Target Start/End: Original strand, 4164161 - 4164515
Alignment:
| Q |
78 |
tcacatcaactagatgcaacacaagagttctcaagttttttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgag |
177 |
Q |
| |
|
||||||||| || ||||||||||||||||||||| || || |||||||| |||| ||| ||| ||| || || || || | ||||||||||| ||||| |
|
|
| T |
4164161 |
tcacatcaattatatgcaacacaagagttctcaaattcttgaatccagagaagtccattggtgctactaggaggcatttctctaggtgcagatgtgtgag |
4164260 |
T |
|
| Q |
178 |
agaatcattgtcagataagagagtaagggaaaatttgtatggc---------aaaatagaatgagtagtatcatttgtttcagatgagaagagaagttca |
268 |
Q |
| |
|
||| | |||||||||||||||||| || ||||||||||||| |||||| ||| |||||||| ||| ||||| ||||| || |||||| |
|
|
| T |
4164261 |
agagtatgtgtcagataagagagtaaagggaaatttgtatggctccccttcaaaaataaaatcagtagtataattagtttcgttcgagaatagcagttca |
4164360 |
T |
|
| Q |
269 |
atacgtttggcactcttagcaattcctttggagatcaatctatcaacgacatccctgtgttcattgcctaatggaaattttactcggattgaactgatca |
368 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||||| | |||| ||||||||| |||| | ||||||||||| ||||||||||||||| ||||| |
|
|
| T |
4164361 |
atacgtttggcacccttagcaattcctttggaaatcaatttgtcaatgacatccctatgttggtcacctaatggaaaatttactcggattgaatggatca |
4164460 |
T |
|
| Q |
369 |
tgtcacctttataatggagcacaaattgatccaatctggtggcaaattcagattg |
423 |
Q |
| |
|
|| |||||| ||||| | || |||||||||||| | |||||||||| |||||| |
|
|
| T |
4164461 |
tggcaccttggtaatgcatcatgaattgatccaatattgtggcaaattgagattg |
4164515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 78 - 423
Target Start/End: Original strand, 4225782 - 4226136
Alignment:
| Q |
78 |
tcacatcaactagatgcaacacaagagttctcaagttttttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagatacgtgag |
177 |
Q |
| |
|
||||||||| || ||||||||||||||||||||| || || |||||||| |||| ||| ||| ||| || || || || | ||||||||||| ||||| |
|
|
| T |
4225782 |
tcacatcaattatatgcaacacaagagttctcaaattcttgaatccagagaagtccattggtgctactaggaggcatttctctaggtgcagatgtgtgag |
4225881 |
T |
|
| Q |
178 |
agaatcattgtcagataagagagtaagggaaaatttgtatggc---------aaaatagaatgagtagtatcatttgtttcagatgagaagagaagttca |
268 |
Q |
| |
|
||| | |||||||||||||||||| || ||||||||||||| |||||| ||| |||||||| ||| ||||| ||||| || |||||| |
|
|
| T |
4225882 |
agagtatgtgtcagataagagagtaaagggaaatttgtatggctccccttcaaaaataaaatcagtagtataattagtttcgttcgagaatagcagttca |
4225981 |
T |
|
| Q |
269 |
atacgtttggcactcttagcaattcctttggagatcaatctatcaacgacatccctgtgttcattgcctaatggaaattttactcggattgaactgatca |
368 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||||| | |||| ||||||||| |||| | ||||||||||| ||||||||||||||| ||||| |
|
|
| T |
4225982 |
atacgtttggcacccttagcaattcctttggaaatcaatttgtcaatgacatccctatgttggtcacctaatggaaaatttactcggattgaatggatca |
4226081 |
T |
|
| Q |
369 |
tgtcacctttataatggagcacaaattgatccaatctggtggcaaattcagattg |
423 |
Q |
| |
|
|| |||||| ||||| | || |||||||||||| | |||||||||| |||||| |
|
|
| T |
4226082 |
tggcaccttggtaatgcatcatgaattgatccaatattgtggcaaattgagattg |
4226136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 123; Significance: 7e-63; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 336 - 564
Target Start/End: Complemental strand, 9663628 - 9663403
Alignment:
| Q |
336 |
ctaatggaaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggcaaattcagattgaaagtgaaacct |
435 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||| |||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||| || || |
|
|
| T |
9663628 |
ctaatggaaattttactcggattgaatggatgatggcacctttataatggagcataaattgatccaatcttgtgacaaattcagattgaaagtgtaatct |
9663529 |
T |
|
| Q |
436 |
ttgaaagaggggaaggctttttggtaagccttgaattgtgttatagtcaaacattgtatggagatcaaagttgagttccgtctttaatccccattcgtga |
535 |
Q |
| |
|
||||||||| |||| | ||||||| |||| || ||||||||||||||||| ||||| |||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
9663528 |
ttgaaagagtggaaatgtgtttggta---cttggatagtgttatagtcaaacatggtatgaagatcaaagttgaggtccgtccttaatccccattcgtga |
9663432 |
T |
|
| Q |
536 |
atccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
| ||||| ||||||||||||||| ||||| |
|
|
| T |
9663431 |
acccatcgtttggacaatgcactagtttt |
9663403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 13 - 202
Target Start/End: Complemental strand, 9663914 - 9663722
Alignment:
| Q |
13 |
atcatcaagggtgaagtctacaagatgactgcaattagaacacagactctgaagaagtttctgcttcacatcaactagatgcaacacaagagttctcaag |
112 |
Q |
| |
|
||||||||||| |||||||||||||| ||||| | || ||||||||||||| |||||| || | ||| || ||||||||||||||||||| | || |
|
|
| T |
9663914 |
atcatcaagggccaagtctacaagatgggtgcaaatggagcacagactctgaaccagtttcggcgtgacaaaaattagatgcaacacaagagttgttaaa |
9663815 |
T |
|
| Q |
113 |
ttttttaatccagataagt--tcat-aggttctaatacaagacagttttgtaggtgcagatacgtgagagaatcattgtcagataagagagta |
202 |
Q |
| |
|
|| || |||||||| ||| ||| ||||||| | || ||| ||||||||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
9663814 |
ttattgaatccagagtagtagtcaagaggttctccaatgaggcagctttgtaggtgcagatacgtgagagaatgattggcagataagagagta |
9663722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 51; Significance: 6e-20; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 243 - 425
Target Start/End: Original strand, 12409841 - 12410023
Alignment:
| Q |
243 |
ttgtttcagatgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaatctatcaacgacatccctgtgttcattgcctaatgg |
342 |
Q |
| |
|
|||||| | |||||||||| ||||||||||||||| ||| ||| |||||||||||||| |||| ||| |||| ||| || |||||||||| ||||| |
|
|
| T |
12409841 |
ttgtttgatatgagaagagcagttcaatacgtttgacacccttggcaattcctttggaaatcattctgtcaatgacgtcactgtgttcatgacctaacaa |
12409940 |
T |
|
| Q |
343 |
aaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggcaaattcagattgaa |
425 |
Q |
| |
|
|| || | |||||||||| ||| ||| ||||| |||||| |||| | |||||||||||| |||||||||| |||||||| |
|
|
| T |
12409941 |
gaaattgagtcggattgaaaggatgatggaaccttgataatgcagcatgacttgatccaatctagtggcaaattgagattgaa |
12410023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 243 - 425
Target Start/End: Original strand, 12421901 - 12422083
Alignment:
| Q |
243 |
ttgtttcagatgagaagagaagttcaatacgtttggcactcttagcaattcctttggagatcaatctatcaacgacatccctgtgttcattgcctaatgg |
342 |
Q |
| |
|
|||||| | |||||||||| ||||||||||||||| ||| ||| |||||||||||||| |||| ||| |||| ||| || |||||||||| ||||| |
|
|
| T |
12421901 |
ttgtttgatatgagaagagcagttcaatacgtttgacacccttggcaattcctttggaaatcattctgtcaatgacgtcactgtgttcatgacctaacaa |
12422000 |
T |
|
| Q |
343 |
aaattttactcggattgaactgatcatgtcacctttataatggagcacaaattgatccaatctggtggcaaattcagattgaa |
425 |
Q |
| |
|
|| || | |||||||||| ||| ||| ||||| |||||| |||| | |||||||||||| |||||||||| |||||||| |
|
|
| T |
12422001 |
gaaattgagtcggattgaaaggatgatggaaccttgataatgcagcatgacttgatccaatctagtggcaaattgagattgaa |
12422083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 29196146 - 29196233
Alignment:
| Q |
84 |
caactagatgcaacacaagagttctcaagttttttaatccagataagttcataggttctaatacaagacagttttgtaggtgcagata |
171 |
Q |
| |
|
||||||||||||||||||||||| |||| ||| ||| || ||| |||| ||||||| | ||| |||||||||||| ||||| ||||| |
|
|
| T |
29196146 |
caactagatgcaacacaagagttgtcaattttcttagtctagaaaagtccataggtggtgatagaagacagttttgcaggtgtagata |
29196233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 496 - 564
Target Start/End: Original strand, 12410911 - 12410980
Alignment:
| Q |
496 |
gagatcaaagttgagttccgtctttaatcccc-attcgtgaatccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
||||||||||||||| ||| | ||||||||| ||||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
12410911 |
gagatcaaagttgaggtccattcttaatcccccattcgtgaagccatcgtttggacaatgtacttgtttt |
12410980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 496 - 564
Target Start/End: Original strand, 12422971 - 12423040
Alignment:
| Q |
496 |
gagatcaaagttgagttccgtctttaatcccc-attcgtgaatccatcttttggacaatgcacttgtttt |
564 |
Q |
| |
|
||||||||||||||| ||| | ||||||||| ||||||||| ||||| ||||||||||| ||||||||| |
|
|
| T |
12422971 |
gagatcaaagttgaggtccattcttaatcccccattcgtgaagccatcgtttggacaatgtacttgtttt |
12423040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 111
Target Start/End: Original strand, 12409650 - 12409688
Alignment:
| Q |
73 |
ctgcttcacatcaactagatgcaacacaagagttctcaa |
111 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
12409650 |
ctgcttcacatcgactagacgcaacacaagagttctcaa |
12409688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 111
Target Start/End: Original strand, 12421710 - 12421748
Alignment:
| Q |
73 |
ctgcttcacatcaactagatgcaacacaagagttctcaa |
111 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
12421710 |
ctgcttcacatcgactagacgcaacacaagagttctcaa |
12421748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 422
Target Start/End: Original strand, 2223791 - 2223948
Alignment:
| Q |
265 |
ttcaatacgtttggcactcttagcaattcctttggagatcaatctatcaacgacatccctgtgttcattgcctaatggaaattttactcggattgaactg |
364 |
Q |
| |
|
||||| ||||||| ||| |||||||||||||||||| |||| || |||| |||| | |||||| | ||||||||||| | |||||||||| | |
|
|
| T |
2223791 |
ttcaagacgtttgacacccttagcaattcctttggaaatcatcctttcaatgacacctgtgtgtttggtacctaatggaaacacgagtcggattgaatgg |
2223890 |
T |
|
| Q |
365 |
atcatgtcacctttataatggagcacaaattgatccaatctggtggcaaattcagatt |
422 |
Q |
| |
|
||||||||||||| |||||| |||| |||||||||| ||| | |||||||||||||| |
|
|
| T |
2223891 |
atcatgtcaccttgataatgcagcatgaattgatccactcttgcggcaaattcagatt |
2223948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 478 - 554
Target Start/End: Original strand, 2223989 - 2224065
Alignment:
| Q |
478 |
atagtcaaacattgtatggagatcaaagttgagttccgtctttaatccccattcgtgaatccatcttttggacaatg |
554 |
Q |
| |
|
||||||||||| |||| || |||||||||||| ||| | | |||||||||||||||| |||| ||||||||||| |
|
|
| T |
2223989 |
atagtcaaacaaagtattgatatcaaagttgaggtccaccctgaatccccattcgtgaagccatagtttggacaatg |
2224065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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