View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19233_high_19 (Length: 202)
Name: NF19233_high_19
Description: NF19233
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19233_high_19 |
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Alignment Details
Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 43375855 - 43376036
Alignment:
| Q |
1 |
ctgactgaactgtagcctatgtttgttctaacttctaacggcctatattaattcaaattccagttgtaatatactttttcttcgtnnnnnnntaacagac |
100 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
43375855 |
ctgactgaactgtagcctatgtttgttctaacttccaacggcctatattaattcaaattccagttgtaatatactttttcttcgtaaaaaaataacagac |
43375954 |
T |
|
| Q |
101 |
caaatatagggtatatttttagttaaaacatcgaaaccagaaggtgtagtgcagtaacagaaaacaaaagatatctgatctg |
182 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43375955 |
caaatatagggtatatttttagttaaaacatcgaaaccagaaggtgtagtgcagtaacagaaaacaaaagatatctgatctg |
43376036 |
T |
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