View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19233_low_7 (Length: 397)
Name: NF19233_low_7
Description: NF19233
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19233_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 343; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 11 - 380
Target Start/End: Complemental strand, 46112919 - 46112547
Alignment:
| Q |
11 |
cacagaacaaagcatacagttcacgtaaaaggaaacttaactgttttatcttagaatatggatttagggcctaacacatccccacaaaactgagatttaa |
110 |
Q |
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| T |
46112919 |
cacaggacaaagcatacagttcacgtaaaaggaaacttaactgttttatcttagaatatggatttagggcctaacacatccccacaaaactgagatttaa |
46112820 |
T |
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| Q |
111 |
aggtccaagctctaagcacta---agctcatggctctagttgatgtggaacttgcaaaattttccatgattaattaaacctaccaatgaaacatctatgc |
207 |
Q |
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| T |
46112819 |
aggtccaagctctaagcactacttagctcatagctctagttgatgtggaacttgcaaaattttccatgattaattaaacctaccaatgaaacatctatgc |
46112720 |
T |
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| Q |
208 |
tgtcacatagatcacaacaatgaaaatcagactactgattgaagctgtcctgtacctcaaagcatggttttcggtgtctgcaacataaaggatatttgtc |
307 |
Q |
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| T |
46112719 |
tgtcacatagatcacaacaatgaaaatcagactactgattgaagctgtcctgtacctcaaagcatggttttcggtgtctgcaacataaaggatatttttc |
46112620 |
T |
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| Q |
308 |
tttgcattataagcaaggccctggagaaccaagaaccacaaataagtatagagtgtgttaaagtgattgcaat |
380 |
Q |
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| T |
46112619 |
tttgcattataagcaaggccctggagaaccaagaaccacaaataagtatagcgtgtgttaaagtgattgcaat |
46112547 |
T |
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