View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19233_low_8 (Length: 355)
Name: NF19233_low_8
Description: NF19233
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19233_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 22 - 141
Target Start/End: Original strand, 8433197 - 8433313
Alignment:
| Q |
22 |
attcctctcacatttaatatctgtaatctacgactcctaggagccctaaggtagttttgtttaatgtatctattttttcgtaagtcaataaccatttcat |
121 |
Q |
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| T |
8433197 |
attcctctcacatttaatatc---aatctacgactcctaggagcactaaggtagttttgtttaatgtatctattttttcgtaagtcaataaccatttcat |
8433293 |
T |
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| Q |
122 |
cataaagtttgcatccatat |
141 |
Q |
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|||||||||||||||||||| |
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| T |
8433294 |
cataaagtttgcatccatat |
8433313 |
T |
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