View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19234_low_10 (Length: 303)

Name: NF19234_low_10
Description: NF19234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19234_low_10
NF19234_low_10
[»] chr6 (39 HSPs)
chr6 (12-200)||(23267709-23267907)
chr6 (200-303)||(14393632-14393735)
chr6 (200-303)||(15546700-15546803)
chr6 (200-303)||(21379941-21380044)
chr6 (200-303)||(8091130-8091233)
chr6 (200-303)||(885453-885556)
chr6 (200-303)||(4890480-4890583)
chr6 (200-303)||(13439764-13439867)
chr6 (201-303)||(7808677-7808779)
chr6 (200-302)||(11687143-11687245)
chr6 (200-302)||(18998117-18998218)
chr6 (209-301)||(3369055-3369147)
chr6 (204-299)||(29609073-29609168)
chr6 (205-303)||(4238922-4239020)
chr6 (200-303)||(13172574-13172676)
chr6 (204-303)||(20501774-20501872)
chr6 (200-297)||(17279601-17279695)
chr6 (200-253)||(21380059-21380112)
chr6 (231-303)||(31764356-31764428)
chr6 (222-277)||(6433751-6433806)
chr6 (200-301)||(17367064-17367158)
chr6 (200-253)||(885385-885438)
chr6 (200-253)||(4890599-4890652)
chr6 (200-257)||(6433690-6433747)
chr6 (200-253)||(11687261-11687314)
chr6 (200-253)||(3368985-3369038)
chr6 (200-253)||(20501706-20501759)
chr6 (201-253)||(8091063-8091115)
chr6 (200-253)||(13439695-13439748)
chr6 (200-253)||(15546632-15546685)
chr6 (201-253)||(7808610-7808662)
chr6 (202-253)||(18998235-18998286)
chr6 (227-300)||(7187633-7187706)
chr6 (204-253)||(29609005-29609054)
chr6 (213-253)||(14393574-14393614)
chr6 (237-301)||(30905046-30905110)
chr6 (222-301)||(2599078-2599156)
chr6 (204-253)||(31764443-31764492)
chr6 (200-230)||(5416655-5416685)
[»] chr7 (65 HSPs)
chr7 (200-303)||(24836088-24836191)
chr7 (200-303)||(20184238-20184341)
chr7 (200-301)||(31231614-31231715)
chr7 (200-303)||(34052347-34052450)
chr7 (200-303)||(35339278-35339381)
chr7 (203-303)||(30594761-30594861)
chr7 (204-303)||(30259070-30259169)
chr7 (200-303)||(3953042-3953145)
chr7 (200-300)||(10936470-10936570)
chr7 (200-303)||(38883289-38883392)
chr7 (200-303)||(39617841-39617944)
chr7 (200-303)||(45997508-45997611)
chr7 (200-302)||(40358184-40358289)
chr7 (201-301)||(39143713-39143813)
chr7 (200-303)||(9285714-9285817)
chr7 (200-303)||(9289781-9289884)
chr7 (200-303)||(12142261-12142364)
chr7 (202-303)||(37093836-37093937)
chr7 (200-303)||(24123755-24123858)
chr7 (200-303)||(25742435-25742534)
chr7 (213-303)||(31521538-31521628)
chr7 (200-303)||(48103436-48103536)
chr7 (204-300)||(10398390-10398486)
chr7 (204-303)||(29277905-29278004)
chr7 (200-301)||(47237433-47237526)
chr7 (200-253)||(10936588-10936641)
chr7 (200-253)||(31231734-31231787)
chr7 (200-273)||(35665633-35665706)
chr7 (200-253)||(38528530-38528583)
chr7 (200-252)||(33721827-33721879)
chr7 (231-302)||(33749713-33749784)
chr7 (200-253)||(34052279-34052332)
chr7 (200-253)||(38883221-38883274)
chr7 (201-253)||(35665734-35665786)
chr7 (200-253)||(24836020-24836073)
chr7 (215-303)||(16876470-16876559)
chr7 (200-253)||(20184357-20184410)
chr7 (200-253)||(30259184-30259237)
chr7 (200-253)||(30594693-30594746)
chr7 (198-251)||(39143826-39143879)
chr7 (200-253)||(47237546-47237599)
chr7 (200-253)||(12142192-12142245)
chr7 (200-245)||(17101654-17101699)
chr7 (200-245)||(17101700-17101745)
chr7 (200-253)||(29277838-29277891)
chr7 (213-302)||(38989084-38989173)
chr7 (200-253)||(48103368-48103421)
chr7 (202-253)||(35339396-35339447)
chr7 (254-301)||(38528464-38528511)
chr7 (241-296)||(44148722-44148777)
chr7 (200-253)||(3953160-3953213)
chr7 (200-253)||(9285832-9285885)
chr7 (200-253)||(9289899-9289952)
chr7 (214-300)||(22723240-22723328)
chr7 (200-253)||(39617960-39618012)
chr7 (201-248)||(11486865-11486912)
chr7 (258-300)||(1402990-1403032)
chr7 (258-300)||(25572883-25572925)
chr7 (200-253)||(25742549-25742602)
chr7 (204-253)||(38528394-38528443)
chr7 (200-253)||(45997626-45997679)
chr7 (230-301)||(35007103-35007173)
chr7 (247-301)||(1072302-1072358)
chr7 (237-294)||(21581183-21581240)
chr7 (200-253)||(37093768-37093821)
[»] chr8 (46 HSPs)
chr8 (202-303)||(40891081-40891182)
chr8 (200-303)||(17426628-17426731)
chr8 (200-303)||(15882269-15882372)
chr8 (200-303)||(38629542-38629645)
chr8 (200-303)||(38520086-38520189)
chr8 (204-301)||(24741827-24741924)
chr8 (204-303)||(29780963-29781062)
chr8 (200-301)||(23940804-23940905)
chr8 (200-302)||(33100645-33100747)
chr8 (213-301)||(4261989-4262077)
chr8 (200-303)||(12234534-12234638)
chr8 (200-303)||(8210391-8210494)
chr8 (200-302)||(24211278-24211380)
chr8 (216-302)||(11828612-11828698)
chr8 (204-298)||(35467243-35467337)
chr8 (202-303)||(37114306-37114407)
chr8 (204-301)||(14834676-14834770)
chr8 (200-303)||(40393791-40393893)
chr8 (200-290)||(38515585-38515675)
chr8 (204-303)||(38405207-38405305)
chr8 (200-254)||(8210323-8210377)
chr8 (200-253)||(15882200-15882253)
chr8 (200-248)||(24211401-24211449)
chr8 (204-300)||(33390717-33390813)
chr8 (201-253)||(37114239-37114291)
chr8 (198-253)||(23940923-23940978)
chr8 (200-253)||(17426748-17426801)
chr8 (200-253)||(29781077-29781130)
chr8 (200-253)||(4035741-4035794)
chr8 (200-253)||(12234466-12234519)
chr8 (200-253)||(38520018-38520071)
chr8 (208-297)||(9775206-9775297)
chr8 (201-253)||(33100763-33100815)
chr8 (250-301)||(25264277-25264328)
chr8 (200-253)||(11828721-11828774)
chr8 (237-300)||(7959857-7959920)
chr8 (204-266)||(33940713-33940774)
chr8 (200-253)||(38629474-38629527)
chr8 (200-230)||(4036570-4036600)
chr8 (230-284)||(5356153-5356207)
chr8 (212-253)||(24741941-24741982)
chr8 (204-253)||(35467175-35467224)
chr8 (201-253)||(5356242-5356294)
chr8 (260-300)||(10778728-10778768)
chr8 (202-234)||(26261502-26261534)
chr8 (268-300)||(29869941-29869973)
[»] chr4 (60 HSPs)
chr4 (200-303)||(24915794-24915897)
chr4 (200-303)||(42274492-42274595)
chr4 (200-303)||(530669-530772)
chr4 (200-303)||(1298980-1299083)
chr4 (200-303)||(18417725-18417828)
chr4 (201-303)||(32318721-32318823)
chr4 (202-303)||(24969543-24969644)
chr4 (200-302)||(21048705-21048807)
chr4 (200-303)||(13204445-13204548)
chr4 (200-303)||(27434678-27434781)
chr4 (200-303)||(55107592-55107695)
chr4 (200-303)||(4552853-4552956)
chr4 (200-303)||(20435140-20435243)
chr4 (200-303)||(23928568-23928670)
chr4 (200-303)||(55049400-55049503)
chr4 (201-303)||(4688248-4688350)
chr4 (200-302)||(35360745-35360846)
chr4 (200-303)||(28809846-28809950)
chr4 (204-299)||(9355557-9355652)
chr4 (205-302)||(24294536-24294636)
chr4 (212-303)||(2272434-2272525)
chr4 (200-294)||(3422429-3422523)
chr4 (200-273)||(43486200-43486273)
chr4 (227-300)||(56552132-56552205)
chr4 (231-301)||(4895042-4895113)
chr4 (202-301)||(36030941-36031031)
chr4 (204-302)||(16995559-16995656)
chr4 (200-253)||(530787-530840)
chr4 (200-253)||(52824239-52824292)
chr4 (201-253)||(18417658-18417710)
chr4 (200-253)||(1298912-1298965)
chr4 (200-253)||(20435258-20435311)
chr4 (200-253)||(24969662-24969715)
chr4 (201-253)||(42274611-42274663)
chr4 (204-300)||(47452814-47452910)
chr4 (200-253)||(55107524-55107577)
chr4 (202-253)||(37525061-37525112)
chr4 (200-253)||(4552785-4552838)
chr4 (200-253)||(23928685-23928738)
chr4 (201-253)||(4688366-4688418)
chr4 (200-247)||(28573947-28573994)
chr4 (200-251)||(28809967-28810018)
chr4 (204-253)||(3422547-3422596)
chr4 (200-253)||(13204377-13204430)
chr4 (200-253)||(27434610-27434663)
chr4 (200-254)||(52587430-52587481)
chr4 (204-299)||(19600944-19601039)
chr4 (267-302)||(52587382-52587417)
chr4 (263-302)||(52824308-52824347)
chr4 (203-253)||(56552064-56552114)
chr4 (219-288)||(2990573-2990642)
chr4 (200-273)||(11330106-11330179)
chr4 (204-253)||(47465102-47465151)
chr4 (204-253)||(2272371-2272420)
chr4 (200-253)||(24915917-24915969)
chr4 (200-253)||(32318838-32318891)
chr4 (200-253)||(35360677-35360729)
chr4 (204-253)||(42020208-42020257)
chr4 (223-288)||(42906861-42906926)
chr4 (204-252)||(16995673-16995721)
[»] chr3 (94 HSPs)
chr3 (200-303)||(21969157-21969260)
chr3 (200-303)||(21991593-21991696)
chr3 (200-303)||(3970491-3970594)
chr3 (200-303)||(4072273-4072376)
chr3 (200-303)||(13078163-13078266)
chr3 (200-303)||(25446318-25446420)
chr3 (200-303)||(45487867-45487970)
chr3 (200-303)||(50099502-50099605)
chr3 (200-303)||(22101233-22101336)
chr3 (201-303)||(8831809-8831911)
chr3 (198-303)||(22176177-22176282)
chr3 (200-303)||(26906522-26906625)
chr3 (200-303)||(36278756-36278859)
chr3 (201-303)||(10254637-10254739)
chr3 (202-303)||(12838145-12838246)
chr3 (202-303)||(32237396-32237497)
chr3 (200-303)||(25488341-25488444)
chr3 (200-303)||(25561079-25561182)
chr3 (200-303)||(35368801-35368904)
chr3 (200-303)||(36822760-36822863)
chr3 (200-303)||(43639081-43639184)
chr3 (200-302)||(36657433-36657535)
chr3 (200-303)||(12789674-12789777)
chr3 (201-303)||(13723989-13724090)
chr3 (200-303)||(39850344-39850448)
chr3 (204-299)||(1476555-1476650)
chr3 (200-303)||(10117584-10117682)
chr3 (200-303)||(10441258-10441361)
chr3 (200-303)||(45712903-45713006)
chr3 (200-303)||(55340293-55340396)
chr3 (200-302)||(44611382-44611483)
chr3 (202-303)||(404113-404213)
chr3 (200-303)||(46679329-46679432)
chr3 (201-303)||(10017182-10017279)
chr3 (200-294)||(26976842-26976936)
chr3 (200-294)||(26977767-26977861)
chr3 (204-299)||(42105387-42105482)
chr3 (200-303)||(43150548-43150649)
chr3 (204-301)||(297541-297638)
chr3 (204-303)||(5529960-5530059)
chr3 (200-253)||(21969275-21969328)
chr3 (200-253)||(21991711-21991764)
chr3 (214-303)||(44920661-44920749)
chr3 (200-253)||(45487799-45487852)
chr3 (204-301)||(49984001-49984098)
chr3 (201-301)||(156978-157069)
chr3 (204-296)||(46222032-46222124)
chr3 (200-303)||(36329188-36329283)
chr3 (200-253)||(4072392-4072445)
chr3 (200-253)||(12789606-12789659)
chr3 (200-253)||(25488459-25488512)
chr3 (200-253)||(25561011-25561064)
chr3 (200-253)||(26906454-26906507)
chr3 (200-253)||(32237512-32237565)
chr3 (200-253)||(35368549-35368602)
chr3 (200-253)||(36278874-36278927)
chr3 (200-253)||(36657551-36657604)
chr3 (200-253)||(39850463-39850516)
chr3 (201-253)||(5529892-5529944)
chr3 (201-253)||(10017115-10017167)
chr3 (201-253)||(10254569-10254621)
chr3 (205-301)||(46664246-46664342)
chr3 (202-253)||(43639200-43639251)
chr3 (203-253)||(45713021-45713071)
chr3 (204-253)||(1476669-1476718)
chr3 (200-253)||(3970609-3970662)
chr3 (204-253)||(8831744-8831793)
chr3 (200-253)||(10441376-10441429)
chr3 (200-253)||(36822878-36822931)
chr3 (200-253)||(38125297-38125350)
chr3 (201-253)||(10117516-10117568)
chr3 (203-299)||(37506130-37506225)
chr3 (202-253)||(12838079-12838130)
chr3 (230-300)||(37536941-37537011)
chr3 (200-253)||(13078281-13078334)
chr3 (238-299)||(39677312-39677373)
chr3 (200-253)||(43150480-43150533)
chr3 (200-253)||(404044-404097)
chr3 (200-253)||(25446251-25446302)
chr3 (204-253)||(26976960-26977009)
chr3 (200-253)||(32362861-32362914)
chr3 (200-253)||(36329298-36329351)
chr3 (200-253)||(55340412-55340465)
chr3 (230-302)||(4567250-4567322)
chr3 (237-303)||(32363122-32363188)
chr3 (207-253)||(44611499-44611545)
chr3 (204-253)||(37506244-37506293)
chr3 (200-253)||(46664176-46664229)
chr3 (200-241)||(46679289-46679330)
chr3 (204-300)||(19953917-19954012)
chr3 (200-253)||(157087-157140)
chr3 (200-253)||(13724106-13724159)
chr3 (204-253)||(42105501-42105550)
chr3 (200-253)||(50099432-50099485)
[»] chr1 (79 HSPs)
chr1 (200-303)||(27240924-27241027)
chr1 (200-303)||(19954911-19955014)
chr1 (200-303)||(47940570-47940673)
chr1 (200-301)||(40647188-40647289)
chr1 (202-303)||(5189537-5189638)
chr1 (202-303)||(14387017-14387118)
chr1 (200-303)||(2854532-2854635)
chr1 (200-303)||(9978051-9978154)
chr1 (200-303)||(23698502-23698605)
chr1 (200-303)||(42561295-42561398)
chr1 (200-303)||(48954214-48954317)
chr1 (200-302)||(51789597-51789699)
chr1 (202-303)||(15324695-15324796)
chr1 (200-303)||(26208493-26208596)
chr1 (201-303)||(3607730-3607832)
chr1 (200-298)||(36880584-36880682)
chr1 (200-303)||(27926251-27926353)
chr1 (200-303)||(50627199-50627302)
chr1 (204-302)||(957658-957756)
chr1 (201-303)||(1387846-1387948)
chr1 (201-303)||(19796982-19797084)
chr1 (229-303)||(6079452-6079526)
chr1 (199-301)||(51276694-51276796)
chr1 (204-303)||(27928302-27928400)
chr1 (204-303)||(49284298-49284397)
chr1 (200-303)||(50162538-50162641)
chr1 (204-303)||(50856325-50856424)
chr1 (200-301)||(27670213-27670315)
chr1 (222-303)||(4299414-4299495)
chr1 (194-303)||(21930449-21930555)
chr1 (200-302)||(2125070-2125172)
chr1 (222-302)||(48645036-48645116)
chr1 (204-303)||(22338988-22339087)
chr1 (204-300)||(36007824-36007920)
chr1 (200-253)||(5189469-5189522)
chr1 (200-253)||(19797099-19797152)
chr1 (200-253)||(49285093-49285146)
chr1 (201-253)||(9978170-9978222)
chr1 (200-267)||(362461-362528)
chr1 (204-303)||(16518302-16518403)
chr1 (200-253)||(2854650-2854703)
chr1 (200-253)||(3607847-3607900)
chr1 (200-253)||(4299513-4299566)
chr1 (200-253)||(15324626-15324679)
chr1 (200-253)||(23698620-23698673)
chr1 (200-253)||(27926370-27926423)
chr1 (244-301)||(29598393-29598450)
chr1 (200-253)||(42561413-42561466)
chr1 (200-253)||(47940689-47940742)
chr1 (200-253)||(48954332-48954385)
chr1 (200-253)||(50627131-50627184)
chr1 (201-253)||(14387133-14387185)
chr1 (200-252)||(25297966-25298018)
chr1 (202-253)||(50162657-50162708)
chr1 (200-258)||(29598450-29598508)
chr1 (200-253)||(19955029-19955082)
chr1 (200-253)||(27241042-27241095)
chr1 (200-253)||(27928416-27928469)
chr1 (214-303)||(35547714-35547803)
chr1 (200-253)||(51789713-51789766)
chr1 (241-293)||(2302481-2302533)
chr1 (201-253)||(51276813-51276865)
chr1 (200-253)||(2125188-2125241)
chr1 (257-302)||(9895322-9895367)
chr1 (200-253)||(40647116-40647169)
chr1 (204-303)||(28244026-28244119)
chr1 (232-300)||(39015225-39015293)
chr1 (204-253)||(22339102-22339151)
chr1 (231-303)||(28431733-28431805)
chr1 (200-247)||(25297922-25297968)
chr1 (200-253)||(1387780-1387831)
chr1 (208-302)||(5059568-5059664)
chr1 (200-253)||(6079384-6079437)
chr1 (200-253)||(9895253-9895306)
chr1 (200-253)||(21930380-21930433)
chr1 (200-253)||(36880289-36880342)
chr1 (260-300)||(18651310-18651350)
chr1 (226-303)||(48958233-48958309)
chr1 (204-248)||(16518424-16518468)
[»] scaffold0122 (2 HSPs)
scaffold0122 (200-303)||(45902-46005)
scaffold0122 (200-253)||(45834-45887)
[»] chr2 (57 HSPs)
chr2 (200-303)||(1923980-1924083)
chr2 (200-303)||(24101832-24101935)
chr2 (200-303)||(45408693-45408796)
chr2 (200-303)||(2818734-2818837)
chr2 (200-303)||(7737133-7737236)
chr2 (200-303)||(27920640-27920743)
chr2 (200-303)||(34490524-34490627)
chr2 (200-303)||(3116944-3117047)
chr2 (200-303)||(9281347-9281450)
chr2 (200-303)||(43476014-43476117)
chr2 (200-303)||(6605803-6605905)
chr2 (204-303)||(12850546-12850645)
chr2 (200-303)||(16705801-16705904)
chr2 (200-303)||(22269790-22269893)
chr2 (200-303)||(42713777-42713880)
chr2 (200-302)||(9933570-9933671)
chr2 (202-303)||(34455953-34456054)
chr2 (223-302)||(9850781-9850860)
chr2 (200-303)||(20892953-20893055)
chr2 (200-303)||(29229361-29229467)
chr2 (200-303)||(29342661-29342767)
chr2 (230-303)||(23835945-23836018)
chr2 (207-303)||(7116438-7116534)
chr2 (201-266)||(10552986-10553051)
chr2 (206-301)||(40362553-40362647)
chr2 (200-253)||(16705733-16705786)
chr2 (200-253)||(1924099-1924152)
chr2 (200-253)||(9281465-9281518)
chr2 (200-253)||(20892884-20892937)
chr2 (200-253)||(23835876-23835929)
chr2 (200-253)||(24101950-24102003)
chr2 (200-253)||(34455885-34455938)
chr2 (200-257)||(43858548-43858605)
chr2 (200-253)||(3116876-3116929)
chr2 (200-253)||(9933687-9933740)
chr2 (200-253)||(34490456-34490509)
chr2 (200-253)||(45408625-45408678)
chr2 (205-253)||(2818671-2818719)
chr2 (214-301)||(17500020-17500107)
chr2 (200-253)||(12850660-12850713)
chr2 (200-253)||(22269722-22269775)
chr2 (214-303)||(39242997-39243086)
chr2 (201-253)||(7737065-7737117)
chr2 (200-253)||(27920573-27920625)
chr2 (200-253)||(42713896-42713949)
chr2 (200-252)||(8111692-8111744)
chr2 (200-239)||(6605738-6605777)
chr2 (231-273)||(17434728-17434770)
chr2 (204-301)||(25095801-25095898)
chr2 (204-253)||(7116374-7116423)
chr2 (200-253)||(29229482-29229534)
chr2 (200-253)||(29342782-29342834)
chr2 (201-253)||(9850875-9850923)
chr2 (202-253)||(43475946-43475997)
chr2 (212-254)||(17434798-17434840)
chr2 (204-297)||(1699853-1699946)
chr2 (275-303)||(17434755-17434783)
[»] chr5 (62 HSPs)
chr5 (200-302)||(20476500-20476602)
chr5 (200-303)||(33629345-33629448)
chr5 (200-303)||(1138627-1138730)
chr5 (200-302)||(15855912-15856014)
chr5 (200-302)||(16473024-16473126)
chr5 (200-302)||(35420612-35420714)
chr5 (203-303)||(12744894-12744994)
chr5 (200-303)||(4266050-4266153)
chr5 (200-302)||(13754291-13754393)
chr5 (204-302)||(32623219-32623317)
chr5 (203-302)||(12807980-12808079)
chr5 (200-303)||(21259730-21259833)
chr5 (200-287)||(21591213-21591300)
chr5 (200-287)||(21595330-21595417)
chr5 (200-303)||(43539175-43539278)
chr5 (200-300)||(37552308-37552408)
chr5 (214-303)||(21262011-21262100)
chr5 (204-303)||(19976330-19976429)
chr5 (200-301)||(780794-780895)
chr5 (200-303)||(1456023-1456125)
chr5 (236-303)||(24397282-24397348)
chr5 (212-286)||(2529066-2529140)
chr5 (230-300)||(37655182-37655252)
chr5 (202-253)||(24397364-24397415)
chr5 (200-273)||(2268703-2268776)
chr5 (200-253)||(15855843-15855896)
chr5 (200-253)||(35420730-35420783)
chr5 (200-253)||(1138559-1138612)
chr5 (200-253)||(4265982-4266035)
chr5 (204-253)||(8364748-8364797)
chr5 (204-253)||(16472959-16473008)
chr5 (204-301)||(35807005-35807102)
chr5 (231-303)||(18236536-18236608)
chr5 (202-253)||(2255580-2255631)
chr5 (204-302)||(35276295-35276394)
chr5 (204-266)||(10132359-10132421)
chr5 (200-253)||(1164914-1164967)
chr5 (238-299)||(8364668-8364729)
chr5 (200-253)||(20476431-20476484)
chr5 (200-253)||(21259848-21259901)
chr5 (204-248)||(780915-780959)
chr5 (202-293)||(1384331-1384421)
chr5 (200-243)||(17583367-17583410)
chr5 (204-262)||(4913258-4913316)
chr5 (222-303)||(5144495-5144576)
chr5 (200-253)||(13754409-13754462)
chr5 (203-252)||(25751570-25751619)
chr5 (200-253)||(33629465-33629518)
chr5 (200-248)||(29141805-29141853)
chr5 (215-253)||(20464014-20464052)
chr5 (218-284)||(28056179-28056245)
chr5 (200-253)||(2268172-2268225)
chr5 (204-253)||(35806939-35806988)
chr5 (204-248)||(29141863-29141907)
chr5 (262-301)||(735346-735385)
chr5 (259-297)||(34513477-34513515)
chr5 (200-253)||(12807912-12807964)
chr5 (204-253)||(18236470-18236519)
chr5 (260-300)||(2538467-2538507)
chr5 (220-252)||(10499947-10499979)
chr5 (231-287)||(10500161-10500217)
chr5 (268-300)||(12257582-12257614)
[»] scaffold0188 (2 HSPs)
scaffold0188 (200-303)||(7154-7257)
scaffold0188 (200-253)||(7086-7139)
[»] scaffold0086 (1 HSPs)
scaffold0086 (201-303)||(48194-48296)
[»] scaffold0107 (2 HSPs)
scaffold0107 (200-303)||(51131-51234)
scaffold0107 (200-253)||(51063-51116)
[»] scaffold0163 (2 HSPs)
scaffold0163 (200-302)||(1939-2041)
scaffold0163 (199-253)||(2058-2112)
[»] scaffold0653 (2 HSPs)
scaffold0653 (200-303)||(3393-3496)
scaffold0653 (200-253)||(3511-3564)
[»] scaffold0118 (2 HSPs)
scaffold0118 (201-303)||(14510-14612)
scaffold0118 (200-253)||(14442-14495)
[»] scaffold0137 (2 HSPs)
scaffold0137 (200-303)||(10183-10286)
scaffold0137 (202-253)||(10118-10169)
[»] scaffold0595 (2 HSPs)
scaffold0595 (200-279)||(5797-5878)
scaffold0595 (200-253)||(5701-5754)
[»] scaffold0018 (1 HSPs)
scaffold0018 (210-303)||(138287-138380)
[»] scaffold0013 (1 HSPs)
scaffold0013 (237-303)||(94240-94306)
[»] scaffold0069 (2 HSPs)
scaffold0069 (200-253)||(26405-26458)
scaffold0069 (200-229)||(26463-26492)
[»] scaffold0006 (2 HSPs)
scaffold0006 (200-271)||(72288-72359)
scaffold0006 (200-253)||(72389-72441)
[»] scaffold0004 (1 HSPs)
scaffold0004 (237-269)||(90738-90770)


Alignment Details
Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 12 - 200
Target Start/End: Original strand, 23267709 - 23267907
Alignment:
Q  12 agagacaatagtgacggaggaggacgacggtgatggaggaggtcgacgacagtagtggtggttggtgagagagaaactacacatgcacacnnnnnnnctt 111  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       |||    
T  23267709 agagacaacagtgacggaggaggaggacggtgatggaggaggtcgacgacagtagtggtggttggtgagagagaaactacacacgcacacttcttttctt 23267808  T
Q  112 cctt----------acaggaattgattcattccttcaataaccttcaaaccgattagcggcggcggcggtttcgcatgacggtgacatgatcttcgacg 200  Q
    ||||          |||||||||||||||||||||||||||||||||||||||||||| || || ||| ||||||||| |||||||||||||| |||||    
T  23267809 cctttcagcttggaacaggaattgattcattccttcaataaccttcaaaccgattagcagcagcagcgatttcgcatggcggtgacatgatctccgacg 23267907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 14393735 - 14393632
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14393735 ggagaaaacttaggtataattccttaggtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 14393636  T
Q  300 atcc 303  Q
    ||||    
T  14393635 atcc 14393632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 15546803 - 15546700
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15546803 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaatttaccatgatttcctcaaatccataattttctcaaagtttgttat 15546704  T
Q  300 atcc 303  Q
    ||||    
T  15546703 atcc 15546700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 21379941 - 21380044
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  21379941 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaatgtttgttat 21380040  T
Q  300 atcc 303  Q
    ||||    
T  21380041 atcc 21380044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 8091233 - 8091130
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  8091233 ggagaaaacttaggtacaattgcttaggtgcttttcgtatggttcttaactaaattcaccgtgatttccttaaatccataattttctcaaagtttgttat 8091134  T
Q  300 atcc 303  Q
    ||||    
T  8091133 atcc 8091130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 885556 - 885453
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  885556 ggagaaaacttaggtacaattccttaggtgcttttcctatgattcttaactaaattcatcatgattttctcaaatccataattttctcaaagtttgttat 885457  T
Q  300 atcc 303  Q
    ||||    
T  885456 atcc 885453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 4890480 - 4890583
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  4890480 ggagaaaacttaggtacaatttcttaggtgtttttcgtatggttcttaactaaatttaccatgatttcctcaaattcataattttctcaaagtttgttat 4890579  T
Q  300 atcc 303  Q
    ||||    
T  4890580 atcc 4890583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 13439867 - 13439764
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||| |  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13439867 ggagaaaacttaggtacaattacgcaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 13439768  T
Q  300 atcc 303  Q
    ||||    
T  13439767 atcc 13439764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 201 - 303
Target Start/End: Complemental strand, 7808779 - 7808677
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| ||||||||||||||||||||||||    
T  7808779 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaataccatgatttcctcaaatctataattttctcaaagtttgttata 7808680  T
Q  301 tcc 303  Q
    |||    
T  7808679 tcc 7808677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 11687143 - 11687245
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  11687143 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttat 11687242  T
Q  300 atc 302  Q
    |||    
T  11687243 atc 11687245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 18998117 - 18998218
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18998117 ggagaaaacttaggtacaattccttaggtgtttttcgtacg-ttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttat 18998215  T
Q  300 atc 302  Q
    |||    
T  18998216 atc 18998218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 209 - 301
Target Start/End: Complemental strand, 3369147 - 3369055
Alignment:
Q  209 ttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3369147 ttaggtacaattcgttaggtgcttttcgtatcgttcctaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatat 3369055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 204 - 299
Target Start/End: Complemental strand, 29609168 - 29609073
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  29609168 aaaacttacgtacaattccttagatgcttttcgtatggtttttaactaaattcaccgtgatttccttaaatccataattttctcaaagtttgttat 29609073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 205 - 303
Target Start/End: Complemental strand, 4239020 - 4238922
Alignment:
Q  205 aaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    ||||||||||||||||||||  |||||||| ||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  4239020 aaacttaggtacaattccttctgtgctttttgtatggttcttaattaaattcaccatgattttctcaaatccttaattttctcaaagtttgttatatcc 4238922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 13172574 - 13172676
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||  ||| || |||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||    
T  13172574 ggagaaaacttaggtacaattctctagatgtttttcgtatggttcttaactaaattca-tatcatttcctcaaatccataattttctcaaagtttgttat 13172672  T
Q  300 atcc 303  Q
    ||||    
T  13172673 atcc 13172676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 204 - 303
Target Start/End: Complemental strand, 20501872 - 20501774
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  20501872 aaaacttag-tacaatttcttaggtgcttttcgtatggttcttaactaaaaataccatgatttcttcaaatccataattttctcgaagtttgttatatcc 20501774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 200 - 297
Target Start/End: Complemental strand, 17279695 - 17279601
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 297  Q
    ||||||||||||||||||||| ||||||||   ||||||| ||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||    
T  17279695 ggagaaaacttaggtacaatttcttaggtg---ttcgtatagttcttaactaaattcatcatgatttcttcaaattcataattttatcaaagtttgtt 17279601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 21380112 - 21380059
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21380112 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 21380059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 31764356 - 31764428
Alignment:
Q  231 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    |||| |||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| |||||    
T  31764356 tttttgtatggttcttaactaaattcaccattattttctcaaattcataattttctcaaagtttgttgtatcc 31764428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 222 - 277
Target Start/End: Complemental strand, 6433806 - 6433751
Alignment:
Q  222 cttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatcca 277  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6433806 cttaggtgcttttcgtatggttcttaactaaattcactatgatttcctcaaatcca 6433751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 17367064 - 17367158
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||| || ||||||||||| ||||||||||        |||||||| |||||| ||||||||||||||||||||||||    
T  17367064 ggagaaaacttaggtacaattccttatgttcttttcgtatgattcttaacta-------gatgatttcatcaaattcataattttctcaaagtttgttat 17367156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 885385 - 885438
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  885385 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 885438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 4890652 - 4890599
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4890652 ggagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 4890599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 257
Target Start/End: Original strand, 6433690 - 6433747
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattca 257  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  6433690 ggagaaaacttaggtataatttcttaggtgcttttcgtatggttcttaactaaattca 6433747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 11687314 - 11687261
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11687314 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 11687261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 3368985 - 3369038
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  3368985 ggagaaaacttgagtacaattccttaggtgcttttcgtatggttcttaactaaa 3369038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 20501706 - 20501759
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  20501706 ggagaaaacttagttacaattccttaggtgtttttcgtatggttcttaactaaa 20501759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 8091063 - 8091115
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  8091063 gagaaaatttagatacaattccttaggtgcttttcgtatggttcttaactaaa 8091115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 13439695 - 13439748
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  13439695 ggagaaaacttaggtacaattccttaagtacttttcgtatggttcttagctaaa 13439748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 15546632 - 15546685
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||||||||    
T  15546632 ggagaaaacttaggtacaattccttagttgttttttgtatggttcttaactaaa 15546685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 7808610 - 7808662
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||    
T  7808610 gagaaaacttaggtacaattccttaggtgtttttcgtttggtttttaactaaa 7808662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 18998286 - 18998235
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  18998286 agaaaatttagctacaattccttaggtgcttttcgtatggttcttaattaaa 18998235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 7187706 - 7187633
Alignment:
Q  227 gtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    |||||||| |||| ||| ||||||||||  |||||||||| ||||||| |||| |||||||||||||| |||||    
T  7187706 gtgctttttgtatagttattaactaaataaaccatgatttactcaaattcatatttttctcaaagtttattata 7187633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 29609005 - 29609054
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||||||    
T  29609005 aaaacttaggtacaattctttaagtgcttttcgtgtggttcttaactaaa 29609054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 253
Target Start/End: Original strand, 14393574 - 14393614
Alignment:
Q  213 gtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  14393574 gtacaattccttaggtgcttttcgtatgattcttaactaaa 14393614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 237 - 301
Target Start/End: Complemental strand, 30905110 - 30905046
Alignment:
Q  237 tatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||| ||||||||||||| | |||| | |||||||| |||||||||||||||||| ||||||    
T  30905110 tatggtttttaactaaattcatcgtgatctactcaaatctataattttctcaaagttttttatat 30905046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 2599078 - 2599156
Alignment:
Q  222 cttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||| ||||| ||||  |||||||||||||| ||||||||||  |||||| ||||||||| |||||| |||||||||    
T  2599078 cttaggtactttttgtatcattcttaactaaattaaccatgatttgttcaaattcataatttt-tcaaagcttgttatat 2599156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 31764492 - 31764443
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||| ||||| | |||||||||| |||||||||||||    
T  31764492 aaaacttaggtacaatttcttagatacttttcgtatagttcttaactaaa 31764443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 230
Target Start/End: Complemental strand, 5416685 - 5416655
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgc 230  Q
    |||||||||||||||||||||||||||||||    
T  5416685 ggagaaaacttaggtacaattccttaggtgc 5416655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 7e-52; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 24836191 - 24836088
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24836191 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 24836092  T
Q  300 atcc 303  Q
    ||||    
T  24836091 atcc 24836088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 20184238 - 20184341
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20184238 ggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 20184337  T
Q  300 atcc 303  Q
    ||||    
T  20184338 atcc 20184341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 31231614 - 31231715
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31231614 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 31231713  T
Q  300 at 301  Q
    ||    
T  31231714 at 31231715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 34052450 - 34052347
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34052450 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttagctaaattcaccatgatttcctcaaattcataattttctcaaagtttgttat 34052351  T
Q  300 atcc 303  Q
    ||||    
T  34052350 atcc 34052347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 35339278 - 35339381
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  35339278 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatgatttcttcaaatccataattttctcaaagtttgttat 35339377  T
Q  300 atcc 303  Q
    ||||    
T  35339378 atcc 35339381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 203 - 303
Target Start/End: Complemental strand, 30594861 - 30594761
Alignment:
Q  203 gaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 302  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30594861 gaaagcttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 30594762  T
Q  303 c 303  Q
    |    
T  30594761 c 30594761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 204 - 303
Target Start/End: Original strand, 30259070 - 30259169
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30259070 aaaacttaggtacaattccttaggtgcttttcctatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatcc 30259169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 3953042 - 3953145
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3953042 ggagaaaacttaggtacaattccttatgtacttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgttat 3953141  T
Q  300 atcc 303  Q
    ||||    
T  3953142 atcc 3953145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 200 - 300
Target Start/End: Original strand, 10936470 - 10936570
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  10936470 ggagaaaacttatgtacaattccttaggtgcttttcgtacggttcttaactaaattcaccatgacttcctcaaatctataattttctcaaagtttgttat 10936569  T
Q  300 a 300  Q
    |    
T  10936570 a 10936570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 38883392 - 38883289
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  38883392 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttat 38883293  T
Q  300 atcc 303  Q
    ||||    
T  38883292 atcc 38883289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 39617841 - 39617944
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||| ||||| || | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39617841 ggagaaaacttaggtacaatttcttagatgttcttcgtatggttcttaactaaattcaccatgatttcctccaatccataattttctcaaagtttgttat 39617940  T
Q  300 atcc 303  Q
    ||||    
T  39617941 atcc 39617944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 45997508 - 45997611
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  45997508 ggagaaaacttaggtacaatttcatatgtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttattat 45997607  T
Q  300 atcc 303  Q
    ||||    
T  45997608 atcc 45997611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 200 - 302
Target Start/End: Complemental strand, 40358289 - 40358184
Alignment:
Q  200 ggagaaaacttaggtacaattcct---taggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgt 296  Q
    ||||||||||||||||||||||||   |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40358289 ggagaaaacttaggtacaattcctccttaggtgcttttcctatgattcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgt 40358190  T
Q  297 tatatc 302  Q
    ||||||    
T  40358189 tatatc 40358184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 39143713 - 39143813
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    ||||||||||||||||||||| || | ||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  39143713 gagaaaacttaggtacaattcattggatgcttttcgtatggttcttgactaaattcaccataatttcctcaaatccataatattctcaaagtttgttata 39143812  T
Q  301 t 301  Q
    |    
T  39143813 t 39143813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 9285714 - 9285817
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||| || ||||||||| ||||||||||||| |||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  9285714 ggagaaaacttaggtacaattcatttggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaatttataattttatcaaagtttgttat 9285813  T
Q  300 atcc 303  Q
    ||||    
T  9285814 atcc 9285817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 9289781 - 9289884
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||| || ||||||||| ||||||||||||| |||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  9289781 ggagaaaacttaggtacaattcatttggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaatttataattttatcaaagtttgttat 9289880  T
Q  300 atcc 303  Q
    ||||    
T  9289881 atcc 9289884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 12142364 - 12142261
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||| || |||||||||||||| ||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  12142364 ggagaaaatttgggtacaattccttatgtgtttttcgtatagttcttaactaaattcaccatgattttctcaaatccataattttctcaaagattgttat 12142265  T
Q  300 atcc 303  Q
    ||||    
T  12142264 atcc 12142261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 37093937 - 37093836
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    |||||| |||| ||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  37093937 agaaaatttagatacaatttcttaggtacttttcgtatggtttttaactaaattcaccatgatttcctcaaatttataattttctcaaagtttgttatat 37093838  T
Q  302 cc 303  Q
    ||    
T  37093837 cc 37093836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 24123755 - 24123858
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||| ||||||||||||||||| || ||||| ||||||||| ||||||||   || ||||||||||||||||||||||||||||||||||||||||    
T  24123755 ggagaaaatttaggtacaattccttatgtactttttgtatggttcctaactaaaaatactatgatttcctcaaatccataattttctcaaagtttgttat 24123854  T
Q  300 atcc 303  Q
    ||||    
T  24123855 atcc 24123858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 25742435 - 25742534
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||    
T  25742435 ggagaaaacttatgtacaatttcttaggtgtttttcctatggttcttaactaaattcat----atttcctcaaatccataattttctcaaagtttgttat 25742530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 31521538 - 31521628
Alignment:
Q  213 gtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    |||||||| ||||| |||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||| ||||||||| ||||||||    
T  31521538 gtacaatttcttagatgcttttcgtatggttcttaactaaatttaccatgattttctcaaattcataattttttcaaagtttattatatcc 31521628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 48103536 - 48103436
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||  |||||||| |||||||||||| ||||||||||||||||||||   | |||||||||||||||||||||  ||||||||||||||||    
T  48103536 ggagaaaacttatctacaattctttaggtgctttttgtatggttcttaactaaatt---cgtgatttcctcaaatccataataatctcaaagtttgttat 48103440  T
Q  300 atcc 303  Q
    ||||    
T  48103439 atcc 48103436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 204 - 300
Target Start/End: Complemental strand, 10398486 - 10398390
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    ||||||||||| || |||||||  ||||||| ||||||||||||||||||||  ||||||||||||||||| |||||| ||||||||||||||||||    
T  10398486 aaaacttaggtgcatttccttatatgctttttgtatggttcttaactaaattatccatgatttcctcaaatacataatcttctcaaagtttgttata 10398390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 204 - 303
Target Start/End: Complemental strand, 29278004 - 29277905
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    ||||||||||||||||||||||  |  ||| |||||| || ||||||||||||||||||||||||| ||||||| |||||||||||| |||||| |||||    
T  29278004 aaaacttaggtacaattccttatatattttccgtatgatttttaactaaattcaccatgatttccttaaatccaaaattttctcaaactttgttgtatcc 29277905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 47237433 - 47237526
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||    
T  47237433 ggagaaaacttaggtataattcct-aggtgcttttcctatggttcttaactaaatt-------atttcctcgaatccataattttctcaaagtttgttat 47237524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 10936641 - 10936588
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10936641 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 10936588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 31231787 - 31231734
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31231787 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 31231734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 273
Target Start/End: Original strand, 35665633 - 35665706
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaa 273  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||   |||||||||| ||||||    
T  35665633 ggagaaaacttaggtacaattgcttaggtgcttttcgtatggttcttaactaaaaataccatgattttctcaaa 35665706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 38528583 - 38528530
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38528583 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 38528530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 33721827 - 33721879
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33721827 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa 33721879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 231 - 302
Target Start/End: Complemental strand, 33749784 - 33749713
Alignment:
Q  231 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 302  Q
    |||| |||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||| |||||||    
T  33749784 tttttgtatggttcttaactaaattcatcatgatttccttaaattcataattttctcaaagtttattatatc 33749713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 34052279 - 34052332
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34052279 ggagaaaacttaggtacatttccttaggtgcttttcgtatggttcttaactaaa 34052332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 38883221 - 38883274
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38883221 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 38883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 35665786 - 35665734
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35665786 gagaaaacttaggtacaattccttaggtgcttttcgtatggtttttaactaaa 35665734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 24836020 - 24836073
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  24836020 ggagaaaacttaggtacaattgcttaggtgcttttcgtatggttctnaactaaa 24836073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 303
Target Start/End: Original strand, 16876470 - 16876559
Alignment:
Q  215 acaattccttaggtgctttt-cgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    ||||||| || ||||||||| |||||||||||||  |||||| |||||||||| ||||||||| ||||||||| | ||||||||||||||    
T  16876470 acaattctttgggtgctttttcgtatggttcttacttaaatttaccatgattttctcaaatccgtaattttcttagagtttgttatatcc 16876559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 20184410 - 20184357
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  20184410 ggagaaaacttaggtacaattccttagctgcttttcgtatgattcttaactaaa 20184357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 30259237 - 30259184
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  30259237 ggagaaaacttaggtacaattccttgggtgctttttgtatggttcttaactaaa 30259184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 30594693 - 30594746
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  30594693 ggagaaaacttaggtacaattccttaggtgcttttcgcatagttcttaactaaa 30594746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 39143879 - 39143826
Alignment:
Q  198 acggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaacta 251  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  39143879 acggagaaaacttaggtacaattcattaggtgtttttcgtatggttcttaacta 39143826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 47237599 - 47237546
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  47237599 ggagaaaacttaggtacaatttctaaggtgcttttcgtatggttcttaactaaa 47237546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 12142192 - 12142245
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  12142192 ggagaaaacttaggtacaattccttacgtgctttgggtatggttcttaactaaa 12142245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 245
Target Start/End: Original strand, 17101654 - 17101699
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttct 245  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  17101654 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttct 17101699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 245
Target Start/End: Complemental strand, 17101745 - 17101700
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttct 245  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  17101745 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttct 17101700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 29277838 - 29277891
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||||||||||||    
T  29277838 ggagaaaacttaggtacaattctttaggtactttttgtatggttcttaactaaa 29277891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 213 - 302
Target Start/End: Original strand, 38989084 - 38989173
Alignment:
Q  213 gtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 302  Q
    |||||||| |||| ||  ||||||||| ||| ||||||||||| | ||| |||| || ||||| ||||||||||||||||||||||||||    
T  38989084 gtacaatttcttatgtatttttcgtatagtttttaactaaatttatcataattttcttaaatctataattttctcaaagtttgttatatc 38989173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 48103368 - 48103421
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  48103368 ggagaaaacttaggtacaatttcttaggtgtttttcgtatgattcttaactaaa 48103421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 35339447 - 35339396
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  35339447 agaaaacttaggtacaattccttatgtacttttcgtatggttcttaaataaa 35339396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 301
Target Start/End: Original strand, 38528464 - 38528511
Alignment:
Q  254 ttcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||    
T  38528464 ttcaccatgaattcctcgaatccataattttctcaaagtttgttatat 38528511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 296
Target Start/End: Complemental strand, 44148777 - 44148722
Alignment:
Q  241 gttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgt 296  Q
    |||||||| |||||||||  ||||||||| ||||||||||||||||||||||||||    
T  44148777 gttcttaattaaattcactgtgatttccttaaatccataattttctcaaagtttgt 44148722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 3953213 - 3953160
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||| ||||||| ||||||| ||||| ||||||||||||||||||    
T  3953213 ggagaaaacttagatacaattacttaggtactttttgtatggttcttaactaaa 3953160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 9285885 - 9285832
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||||||| ||||    
T  9285885 ggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaa 9285832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 9289952 - 9289899
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||||||| ||||    
T  9289952 ggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaa 9289899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 300
Target Start/End: Original strand, 22723240 - 22723328
Alignment:
Q  214 tacaattccttaggtgcttttcgtatggttcttaactaa--attcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    |||||||  ||||||| |||||||||| |||||||||||  ||||| | ||||||||| ||||   |||||||||||||||||||||||    
T  22723240 tacaattttttaggtgtttttcgtatgattcttaactaaatattcatcgtgatttccttaaatttttaattttctcaaagtttgttata 22723328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 39618012 - 39617960
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  39618012 ggagaaaacttag-tacaattctttaggtgcttttcgtatagttcttaactaaa 39617960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 11486865 - 11486912
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 248  Q
    |||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  11486865 gagaaagcttaggtacaatttcttagatgcttttcgtatggttcttaa 11486912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 300
Target Start/End: Complemental strand, 1403032 - 1402990
Alignment:
Q  258 ccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    |||||||||||||||||| |||||||||||||| |||||||||    
T  1403032 ccatgatttcctcaaatctataattttctcaaaatttgttata 1402990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 300
Target Start/End: Complemental strand, 25572925 - 25572883
Alignment:
Q  258 ccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    |||||||||| ||||| ||||||||||||||||||||||||||    
T  25572925 ccatgatttcttcaaaaccataattttctcaaagtttgttata 25572883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 25742602 - 25742549
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||| || ||||| |||| ||||||||||||||||| |||||||||    
T  25742602 ggagaaaacttaagtgcaatttcttaagtgcttttcgtatggttgttaactaaa 25742549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 38528394 - 38528443
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||| |||||||||||||||||  ||||||| ||||||||||||||||||    
T  38528394 aaaagttaggtacaattccttaaatgctttttgtatggttcttaactaaa 38528443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 45997679 - 45997626
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||| ||||| |||||||||||||| |||  ||||||||||||||||||    
T  45997679 ggagaaaacctaggtgcaattccttaggtgttttaggtatggttcttaactaaa 45997626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 35007103 - 35007173
Alignment:
Q  230 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    |||||| ||||||| ||||||||||||| | |||||||||| ||||||||  ||| |||||||||| |||||    
T  35007103 cttttcatatggttattaactaaattcatcgtgatttcctc-aatccatatatttttcaaagtttggtatat 35007173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 301
Target Start/End: Complemental strand, 1072358 - 1072302
Alignment:
Q  247 aactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||||||||||||  ||||||||||||| ||||||| |||  ||||||||||||    
T  1072358 aactaaattcaccatgtgatttcctcaaatctataatttcctctgagtttgttatat 1072302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 21581183 - 21581240
Alignment:
Q  237 tatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagttt 294  Q
    ||||||||||||||||||||| ||||||||  | |||||||| |||||  ||||||||    
T  21581183 tatggttcttaactaaattcatcatgatttttttaaatccatgatttttgcaaagttt 21581240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 37093768 - 37093821
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| |||||||||||| |||||||  |||||||||| ||||||| ||||    
T  37093768 ggagaaaatttaggtacaatttcttaggtatttttcgtatgattcttaattaaa 37093821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 40891182 - 40891081
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40891182 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 40891083  T
Q  302 cc 303  Q
    ||    
T  40891082 cc 40891081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 17426628 - 17426731
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17426628 ggagaaaacttaggtacaattcattaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatctataattttctcaaagtttgttat 17426727  T
Q  300 atcc 303  Q
    ||||    
T  17426728 atcc 17426731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 15882372 - 15882269
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  15882372 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattttctcaaatccataatattctcaaagttagttat 15882273  T
Q  300 atcc 303  Q
    ||||    
T  15882272 atcc 15882269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 38629645 - 38629542
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  38629645 ggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttattat 38629546  T
Q  300 atcc 303  Q
    ||||    
T  38629545 atcc 38629542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 38520189 - 38520086
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38520189 ggagaaaacttaggtacaattccttaagtgcttttcgtatgttttttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttat 38520090  T
Q  300 atcc 303  Q
    ||||    
T  38520089 atcc 38520086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 204 - 301
Target Start/End: Original strand, 24741827 - 24741924
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  24741827 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccatgattttctcagagtttattatat 24741924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 204 - 303
Target Start/End: Original strand, 29780963 - 29781062
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  29780963 aaaatttaggtacaattccttaggtgcttttcgtatggtttttaactaaatttaccataatttcctcaaatccataattttctcaaagtttgttatatcc 29781062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 23940804 - 23940905
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23940804 ggagaaaacttcggtacaatttcttaagtgcttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttat 23940903  T
Q  300 at 301  Q
    ||    
T  23940904 at 23940905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 33100645 - 33100747
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||   ||| | |||||||||||||||||||||||||||||||||||||    
T  33100645 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaaaataccgttatttcctcaaatccataattttctcaaagtttgttat 33100744  T
Q  300 atc 302  Q
    |||    
T  33100745 atc 33100747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 4261989 - 4262077
Alignment:
Q  213 gtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  4261989 gtacaattctttaggtgcttttcgtatggttcttaactaaattcactatgatttcctcaagtccataattttctcaaagtttgttatat 4262077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 12234638 - 12234534
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaag-tttgtta 298  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  12234638 ggagaaaacttaggtacaatttcttagatgcttttcgtatggttattaactaaattcacgatgatttcctcaaattcataattttctcaaagttttgtta 12234539  T
Q  299 tatcc 303  Q
    |||||    
T  12234538 tatcc 12234534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 8210494 - 8210391
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||| |||||||||||||| || |||| ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8210494 ggagaaaacttaagtacaattccttagatgttttttgtatgattcttaaccaaattcatcatgatttcctcaaatccataattttctcaaagtttgttat 8210395  T
Q  300 atcc 303  Q
    ||||    
T  8210394 atcc 8210391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 24211278 - 24211380
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| | ||||||| || ||||||||||||||| ||||||||||    
T  24211278 ggagaaaacttaggtacaattctttaggtgcttttcgtatggttcttaattaaattcaccgtaatttccttaattccataattttctcatagtttgttat 24211377  T
Q  300 atc 302  Q
    |||    
T  24211378 atc 24211380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 216 - 302
Target Start/End: Original strand, 11828612 - 11828698
Alignment:
Q  216 caattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 302  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  11828612 caatttcttaggtgtttttcgtatggttcttaactaaattcaccataatttcctcaaatccattattttctcaaagtttgttatatc 11828698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 204 - 298
Target Start/End: Complemental strand, 35467337 - 35467243
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 298  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||| |||||||||||    
T  35467337 aaaacttacgtacaattccttatgtgcttttcgtatggttcttaactaaattcatcatgatttctttaaatccataattttcttaaagtttgtta 35467243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 37114407 - 37114306
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    |||||| ||||||||||||| |||| || |||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||    
T  37114407 agaaaatttaggtacaattctttagatgttttttgtatggttcttaactaaattcaccatgattttcttaaatccataattttctcaaagtttattatat 37114308  T
Q  302 cc 303  Q
    ||    
T  37114307 cc 37114306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 204 - 301
Target Start/End: Original strand, 14834676 - 14834770
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||| |||||||   ||||||||||||||||    
T  14834676 aaaacttacgtacaattccttacgtgcttttcgtatggttcttaactaaattcaccatgattttcttaaattcataatt---tcaaagtttgttatat 14834770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 40393893 - 40393791
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||| | |||||| |||||||||||||  ||||||||||| ||||||||||||| ||||||||||||   ||||||||||||| ||||||||    
T  40393893 ggagaaaacttaagcacaatttcttaggtgcttttattatggttcttagctaaattcaccataatttcctcaaat-tttaattttctcaaaatttgttat 40393795  T
Q  300 atcc 303  Q
    ||||    
T  40393794 atcc 40393791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 200 - 290
Target Start/End: Complemental strand, 38515675 - 38515585
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaa 290  Q
    ||||||||||||||||||||||||||| ||| |||||| ||||| |||| ||||   || |||||||||||||||||||||||||||||||    
T  38515675 ggagaaaacttaggtacaattccttagatgcatttcgtgtggtttttaattaaaaatacaatgatttcctcaaatccataattttctcaaa 38515585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 204 - 303
Target Start/End: Complemental strand, 38405305 - 38405207
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    ||||||||| ||||||| |||| ||| |||| ||||||||||||||||||||||  ||||||| || |||| | ||||||||||||||||||||||||||    
T  38405305 aaaacttag-tacaatttcttatgtgttttttgtatggttcttaactaaattcataatgattttcttaaattcgtaattttctcaaagtttgttatatcc 38405207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 8210323 - 8210377
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaat 254  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8210323 ggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaat 8210377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 15882200 - 15882253
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15882200 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 15882253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 24211449 - 24211401
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24211449 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 24211401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 204 - 300
Target Start/End: Complemental strand, 33390813 - 33390717
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    ||||||||||| || ||||||||||||||||| ||||||| ||| |||||||   || ||||||||||||| || ||||||||||||||| ||||||    
T  33390813 aaaacttaggtgcatttccttaggtgcttttcatatggtttttagctaaattactcacgatttcctcaaattcacaattttctcaaagttcgttata 33390717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 37114239 - 37114291
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37114239 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaa 37114291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 23940978 - 23940923
Alignment:
Q  198 acggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  23940978 acggagaaaacttagttacaattccttaggtgcttttcgtatggtttttaactaaa 23940923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 17426801 - 17426748
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  17426801 ggagaaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaa 17426748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 29781130 - 29781077
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  29781130 ggagaaaacttaggtccaattccttagatgcttttcgtatggttcttaactaaa 29781077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 4035741 - 4035794
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||||||||    
T  4035741 ggagaaaacttaggtacagttcctcaggtgcttttcgtatggtacttaactaaa 4035794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 12234466 - 12234519
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  12234466 ggagaaaacttaggtataattctttgggtgcttttcgtatggttcttaactaaa 12234519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 38520018 - 38520071
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    
T  38520018 ggagaaaatttaggtataattccttagttgcttttcgtatggttcttaactaaa 38520071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 297
Target Start/End: Original strand, 9775206 - 9775297
Alignment:
Q  208 cttaggtacaattccttaggtgcttttcgtatggttcttaacta--aattcaccatgatttcctcaaatccataattttctcaaagtttgtt 297  Q
    |||||||| |||||||||  ||||||||||||| || |||| ||  |||||||||  |||| ||||||| ||||||||||||||||||||||    
T  9775206 cttaggtataattccttatatgcttttcgtatgatttttaattataaattcaccaaaattttctcaaattcataattttctcaaagtttgtt 9775297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 33100815 - 33100763
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||| |||| |||||||||||| ||||||||||||||    
T  33100815 gagaaaacttaggtacaatttcttatgtgcttttcgtacggttcttaactaaa 33100763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 301
Target Start/End: Original strand, 25264277 - 25264328
Alignment:
Q  250 taaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||||||||||    
T  25264277 taaattcacaatgatttcctcaaattcataattttcttaaagtttgttatat 25264328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 11828774 - 11828721
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||  |||||||| ||| |||||||||||||    
T  11828774 ggagaaaacttaggtacaattccttacttgcttttcatatcgttcttaactaaa 11828721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 237 - 300
Target Start/End: Original strand, 7959857 - 7959920
Alignment:
Q  237 tatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    |||||||||||||||||||  | |||||||||| ||||| ||| || |||||||||||||||||    
T  7959857 tatggttcttaactaaatttgctatgatttcctaaaatctatagttgtctcaaagtttgttata 7959920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 33940774 - 33940713
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattt 266  Q
    ||||||||| |||||||||||||||| || ||  |||||||||||||||||| ||||||||||    
T  33940774 aaaacttag-tacaattccttaggtgtttgtcacatggttcttaactaaatttaccatgattt 33940713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 38629474 - 38629527
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| ||| ||||||||| |||  ||||||||||||||||||||||||||    
T  38629474 ggagaaaatttaagtacaattctttaaatgcttttcgtatggttcttaactaaa 38629527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 230
Target Start/End: Complemental strand, 4036600 - 4036570
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgc 230  Q
    |||||||||||||||||||||||||||||||    
T  4036600 ggagaaaacttaggtacaattccttaggtgc 4036570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 284
Target Start/End: Original strand, 5356153 - 5356207
Alignment:
Q  230 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataatttt 284  Q
    ||||||| ||||||||| |||||||||||||| |||| || |||||||| |||||    
T  5356153 cttttcgcatggttcttgactaaattcaccataattttcttaaatccatcatttt 5356207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 24741982 - 24741941
Alignment:
Q  212 ggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||| | ||||| |||||||||||||||||||||||    
T  24741982 ggtacaattcttgaggtgattttcgtatggttcttaactaaa 24741941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 35467175 - 35467224
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||| |||| | ||||| || |||||||||||||||    
T  35467175 aaaacttaggtacaattctttagatactttttgtgtggttcttaactaaa 35467224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 5356294 - 5356242
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||| ||||||| | |||||| |||||||||| ||||||| ||||    
T  5356294 gagaaaacttagatacaatttcgtaggtgtttttcgtatgattcttaattaaa 5356242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 300
Target Start/End: Complemental strand, 10778768 - 10778728
Alignment:
Q  260 atgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    ||||||||||||||| || ||| ||||||||||||||||||    
T  10778768 atgatttcctcaaattcacaatcttctcaaagtttgttata 10778728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 26261502 - 26261534
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgctttt 234  Q
    ||||||||||||||||||||||||| |||||||    
T  26261502 agaaaacttaggtacaattccttagatgctttt 26261534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 300
Target Start/End: Original strand, 29869941 - 29869973
Alignment:
Q  268 ctcaaatccataattttctcaaagtttgttata 300  Q
    |||||||||| ||||||||||||||||||||||    
T  29869941 ctcaaatccacaattttctcaaagtttgttata 29869973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 24915794 - 24915897
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24915794 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttat 24915893  T
Q  300 atcc 303  Q
    ||||    
T  24915894 atcc 24915897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 42274492 - 42274595
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42274492 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 42274591  T
Q  300 atcc 303  Q
    ||||    
T  42274592 atcc 42274595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 530669 - 530772
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  530669 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaattcaccatcatttcctcaaatccataattttctcaaagtttgttat 530768  T
Q  300 atcc 303  Q
    ||||    
T  530769 atcc 530772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 1299083 - 1298980
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1299083 ggagaaaacttaggtacaattccttaggtgcttttcttatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttat 1298984  T
Q  300 atcc 303  Q
    ||||    
T  1298983 atcc 1298980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 18417828 - 18417725
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18417828 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 18417729  T
Q  300 atcc 303  Q
    ||||    
T  18417728 atcc 18417725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 201 - 303
Target Start/End: Original strand, 32318721 - 32318823
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32318721 gagaaaacttaggtacaattccttatgtgcttttcgtatggttcttaactaaattcaccatgatttcctcagatccataattttctcaaagtttgttata 32318820  T
Q  301 tcc 303  Q
    |||    
T  32318821 tcc 32318823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 202 - 303
Target Start/End: Original strand, 24969543 - 24969644
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24969543 agaaaacttaggtacaattctttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatat 24969642  T
Q  302 cc 303  Q
    ||    
T  24969643 cc 24969644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 21048705 - 21048807
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21048705 ggagaaaacttaggtacaattcgttagatgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcgaagtttgttat 21048804  T
Q  300 atc 302  Q
    |||    
T  21048805 atc 21048807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 13204548 - 13204445
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13204548 ggagaaaacttaggtacaattccttatgtacttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgttat 13204449  T
Q  300 atcc 303  Q
    ||||    
T  13204448 atcc 13204445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 27434781 - 27434678
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  27434781 ggagaaaacttaagtacaattccttaggtgcttttcgtatggttcttaactaaatttaccataatttcctcaaattcataattttctcaaagtttgttat 27434682  T
Q  300 atcc 303  Q
    ||||    
T  27434681 atcc 27434678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 55107695 - 55107592
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  55107695 ggagaaaacttaggtacaattccttaggtgctttttgtatggttctttactaaatttaccatgatttcctcaaatgcataattttctcaaagtttgttat 55107596  T
Q  300 atcc 303  Q
    ||||    
T  55107595 atcc 55107592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 4552956 - 4552853
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4552956 ggagaaaacttaggtacaattccttatatgctttctgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgttat 4552857  T
Q  300 atcc 303  Q
    ||||    
T  4552856 atcc 4552853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 20435140 - 20435243
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  20435140 ggagaaaacttatatacaattccttagatgcttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcgaagtttgttat 20435239  T
Q  300 atcc 303  Q
    ||||    
T  20435240 atcc 20435243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 23928568 - 23928670
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23928568 ggagaaaacttaggtacaattccttag-tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccataattttctcaaaatttgttat 23928666  T
Q  300 atcc 303  Q
    ||||    
T  23928667 atcc 23928670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 55049400 - 55049503
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||    
T  55049400 ggagaaaacttatgtacaattccttaggtgcttttcgtatagttcttaactaaattcactatgatttcctcaaacccataattttttcaaagtttgttat 55049499  T
Q  300 atcc 303  Q
    ||||    
T  55049500 atcc 55049503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 201 - 303
Target Start/End: Original strand, 4688248 - 4688350
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||| || ||||||||||||||||||||||    
T  4688248 gagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcactgtgatttcctcaaattcacaattttctcaaagtttgttata 4688347  T
Q  301 tcc 303  Q
    |||    
T  4688348 tcc 4688350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 200 - 302
Target Start/End: Complemental strand, 35360846 - 35360745
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||| |||||||  |||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35360846 ggagaaaacttag-tacaattttttagttgtttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttat 35360748  T
Q  300 atc 302  Q
    |||    
T  35360747 atc 35360745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 28809846 - 28809950
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaatt-caccatgatttcctcaaatccataattttctcaaagtttgtta 298  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||| ||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||    
T  28809846 ggagaaaacttaggtacaatttcttaggtgcttttggtattgtttttaactaaatttcaccatgattttctcaaatccataattttctcaaaatttgtta 28809945  T
Q  299 tatcc 303  Q
    |||||    
T  28809946 tatcc 28809950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 204 - 299
Target Start/End: Original strand, 9355557 - 9355652
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||    
T  9355557 aaaacttccgtacaattccttaggtgcttttcatatggttcttaactaaattcaccatgatttccttaaatccataattttctcagaatttgttat 9355652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 205 - 302
Target Start/End: Complemental strand, 24294636 - 24294536
Alignment:
Q  205 aaacttaggtacaattccttaggtgct---tttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||||||||||||||||||||| |   |||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  24294636 aaacttaggtacaattccttaggtggtgtttttcgtatggttcttaactaaattcaccataatttcctcaaattcgtaattttctcaaagtttgttatat 24294537  T
Q  302 c 302  Q
    |    
T  24294536 c 24294536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 212 - 303
Target Start/End: Complemental strand, 2272525 - 2272434
Alignment:
Q  212 ggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  2272525 ggtacaattcattatgtgcttttcgtatggttcttagctaaattcaccatgatttccttaaatccataattttatcaaagtttgttctatcc 2272434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 200 - 294
Target Start/End: Original strand, 3422429 - 3422523
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagttt 294  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||| |||||| |  ||||||| |||||||||||||||||||||||||||    
T  3422429 ggagaaaacttaggtacaatttcttaggtgcttttcgtatagttcttaattaaatttagtatgattttctcaaatccataattttctcaaagttt 3422523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 200 - 273
Target Start/End: Original strand, 43486200 - 43486273
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaa 273  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||    
T  43486200 ggagaaaacttaggtacaattccttaggtacttttcctatggttcttaactaaattcaccatgattttctcaaa 43486273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 56552205 - 56552132
Alignment:
Q  227 gtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    |||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  56552205 gtgcttatcgtatggttcttaaataaattaaccatgatttcctcaaatccataattttctcaaagtttgttata 56552132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 231 - 301
Target Start/End: Complemental strand, 4895113 - 4895042
Alignment:
Q  231 ttttcgtatggtt-cttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  4895113 ttttcgtatggtttcttaactaaatttaccatgatttcctcaaattcataattttctcaaagtttgttatat 4895042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 36030941 - 36031031
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    |||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||         |||||||||||||||||||||||||||||||||||    
T  36030941 agaaaagttaggtacaattccttacgtgcttttcgtatgtttcttaactaaattca---------cctcaaatccataattttctcaaagtttgttatat 36031031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 16995559 - 16995656
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 302  Q
    ||||||||||||||||||||| |||| ||||||||||||| |||| |||||||| |||||||| |||||| |||| ||||| ||| |||||||||||||    
T  16995559 aaaacttaggtacaattcctt-ggtgtttttcgtatggtttttaattaaattcaacatgattttctcaaacccatcattttttcagagtttgttatatc 16995656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 530840 - 530787
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  530840 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 530787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 52824239 - 52824292
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52824239 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 52824292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 18417658 - 18417710
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18417658 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 18417710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 1298912 - 1298965
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1298912 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 1298965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 20435311 - 20435258
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20435311 ggagaaaacttaggtacaattctttaggtgcttttcgtatggttcttaactaaa 20435258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 24969715 - 24969662
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24969715 ggagaaaacttaggtacaattccttaggtgcttttcgtatagttcttaactaaa 24969662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 42274663 - 42274611
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42274663 gagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 42274611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 204 - 300
Target Start/End: Original strand, 47452814 - 47452910
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    ||||||||||| || ||||| ||||||||||| |||||||||||||| || |  ||||| |||||||||||||| ||||||| | ||||||||||||    
T  47452814 aaaacttaggttcatttcctaaggtgcttttcatatggttcttaacttaactacccatgttttcctcaaatccacaattttcccgaagtttgttata 47452910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 55107524 - 55107577
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  55107524 ggagaaaacttaggtacaattccttatgtgcttttcatatggttcttaactaaa 55107577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 37525112 - 37525061
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  37525112 agaaaacttaggtacaattctttaggtgcttttcgtgtggttcttaactaaa 37525061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 4552785 - 4552838
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||| ||||||||| ||||||| |||||||||    
T  4552785 ggagaaaacttaggtacaattccttaagtgcttttcatatggtttttaactaaa 4552838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 23928738 - 23928685
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||    
T  23928738 ggagaaaacttatgtacaattccttaggtgctttgcgtatgattcttaactaaa 23928685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 4688418 - 4688366
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| ||||    
T  4688418 gagaaaacttaggtacaattccttagatgattttcgtatggttcttaattaaa 4688366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 28573947 - 28573994
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttctta 247  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  28573947 ggagaaaacttaggtacaattacttaggtgcttttcgcatggttctta 28573994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 251
Target Start/End: Complemental strand, 28810018 - 28809967
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaacta 251  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  28810018 ggagaaaacttaggtacaatttcttagctgcttttggtatggttcttaacta 28809967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 3422596 - 3422547
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  3422596 aaaacttaggtacaattctttaggtgtttttcgtatggtttttaactaaa 3422547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 13204377 - 13204430
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||| ||||||| ||||||| ||||| ||||||||||||||||||    
T  13204377 ggagaaaacttagatacaattacttaggtactttttgtatggttcttaactaaa 13204430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 27434610 - 27434663
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||| |||| |||||||| |||| |||||||||||||    
T  27434610 ggagaaaacttaggtacaatttcttatgtgctttttgtatagttcttaactaaa 27434663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 52587481 - 52587430
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaat 254  Q
    ||||||||||||||||   || |||||||||||||||||||||||||||||||||    
T  52587481 ggagaaaacttaggta---ttacttaggtgcttttcgtatggttcttaactaaat 52587430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 299
Target Start/End: Original strand, 19600944 - 19601039
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||| |||| |||||||| ||||||  ||||  ||||||| |||| ||||||| |||||||||  | ||||||||||| || ||||||||||||||    
T  19600944 aaaatttagatacaattctttaggtaatttttatatggtttttaattaaattcgccatgattttgttaaatccataatattttcaaagtttgttat 19601039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 302
Target Start/End: Original strand, 52587382 - 52587417
Alignment:
Q  267 cctcaaatccataattttctcaaagtttgttatatc 302  Q
    ||||||||||||||||||||||||||||||||||||    
T  52587382 cctcaaatccataattttctcaaagtttgttatatc 52587417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 302
Target Start/End: Complemental strand, 52824347 - 52824308
Alignment:
Q  263 atttcctcaaatccataattttctcaaagtttgttatatc 302  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  52824347 atttcctcaaatccataattttctcaaagtttattatatc 52824308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 253
Target Start/End: Original strand, 56552064 - 56552114
Alignment:
Q  203 gaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||| ||||||| |||||||||||||||| |||||||||| |||||||    
T  56552064 gaaaactcaggtacatttccttaggtgctttttgtatggttctcaactaaa 56552114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 2990573 - 2990642
Alignment:
Q  219 ttccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctca 288  Q
    ||||||| ||||||||| | |||||||||||| ||||  || ||||||||| | ||||||||||||||||    
T  2990573 ttccttaagtgcttttcatgtggttcttaacttaattacccgtgatttccttacatccataattttctca 2990642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 273
Target Start/End: Original strand, 11330106 - 11330179
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaa 273  Q
    ||||||||||||| ||||||| ||||| |||||||| |||| ||||||||| ||   |||||||||| ||||||    
T  11330106 ggagaaaacttagatacaatttcttagatgcttttcatatgattcttaactgaaaataccatgattttctcaaa 11330179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 47465151 - 47465102
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||| ||||||||||||| |||| || |||||||||    
T  47465151 aaaacttaggtacaattctttaggtgcttttcatatgatttttaactaaa 47465102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 2272371 - 2272420
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||| |||||||  ||||||||||||  |||||||||||||||||    
T  2272371 aaaacttagttacaattttttaggtgctttttatatggttcttaactaaa 2272420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 24915969 - 24915917
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||| |||| || ||||| | ||||||||||||||||    
T  24915969 ggagaaaacttaggtacaatttcttatgtactttttg-atggttcttaactaaa 24915917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 32318891 - 32318838
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| ||| ||||||||| ||||||||||||| |||| ||||||| ||||    
T  32318891 ggagaaaatttaagtacaattctttaggtgcttttcatatgattcttaattaaa 32318838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 35360677 - 35360729
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||| |||||||  ||||||  |||||||||||||||||||||||    
T  35360677 ggagaaaacttag-tacaatttattaggtatttttcgtatggttcttaactaaa 35360729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 42020257 - 42020208
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  42020257 aaaacttaggtacaattctctagatactttttgtatggttcttaactaaa 42020208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 288
Target Start/End: Complemental strand, 42906926 - 42906861
Alignment:
Q  223 ttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctca 288  Q
    ||||||||||||| |||||||| ||||||||||    |||||||| ||||||||| | ||||||||    
T  42906926 ttaggtgcttttcctatggttcctaactaaattacttatgatttcttcaaatccacagttttctca 42906861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 16995721 - 16995673
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa 252  Q
    ||||||||| |||||||| ||| ||| ||||||||||||| ||||||||    
T  16995721 aaaacttagatacaattctttaagtgattttcgtatggtttttaactaa 16995673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 94)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 21969157 - 21969260
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21969157 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttat 21969256  T
Q  300 atcc 303  Q
    ||||    
T  21969257 atcc 21969260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 21991593 - 21991696
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21991593 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttat 21991692  T
Q  300 atcc 303  Q
    ||||    
T  21991693 atcc 21991696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 3970491 - 3970594
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3970491 ggagaaaacttaggtgcaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttat 3970590  T
Q  300 atcc 303  Q
    ||||    
T  3970591 atcc 3970594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 4072273 - 4072376
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4072273 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttat 4072372  T
Q  300 atcc 303  Q
    ||||    
T  4072373 atcc 4072376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 13078163 - 13078266
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13078163 ggagaaaacttaggtgcaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttat 13078262  T
Q  300 atcc 303  Q
    ||||    
T  13078263 atcc 13078266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 25446420 - 25446318
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25446420 ggagaaaacttag-tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 25446322  T
Q  300 atcc 303  Q
    ||||    
T  25446321 atcc 25446318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 45487970 - 45487867
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  45487970 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaatgtttgttat 45487871  T
Q  300 atcc 303  Q
    ||||    
T  45487870 atcc 45487867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 50099605 - 50099502
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  50099605 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccataatttcctcaaattcataattttctcaaagtttgttat 50099506  T
Q  300 atcc 303  Q
    ||||    
T  50099505 atcc 50099502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 22101336 - 22101233
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22101336 ggagaaaacttaggtacaattccttatgagcttttcgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgttat 22101237  T
Q  300 atcc 303  Q
    ||||    
T  22101236 atcc 22101233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 201 - 303
Target Start/End: Complemental strand, 8831911 - 8831809
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8831911 gagaaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaattcaccatgatttcttcaaatccataattttctcaaagtttgttata 8831812  T
Q  301 tcc 303  Q
    |||    
T  8831811 tcc 8831809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 198 - 303
Target Start/End: Complemental strand, 22176282 - 22176177
Alignment:
Q  198 acggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 297  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  22176282 acggagaaaacttaggtacaattccttatgtgctttttgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgta 22176183  T
Q  298 atatcc 303  Q
    ||||||    
T  22176182 atatcc 22176177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 26906625 - 26906522
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  26906625 ggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttat 26906526  T
Q  300 atcc 303  Q
    ||||    
T  26906525 atcc 26906522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 36278756 - 36278859
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  36278756 ggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttat 36278855  T
Q  300 atcc 303  Q
    ||||    
T  36278856 atcc 36278859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 201 - 303
Target Start/End: Complemental strand, 10254739 - 10254637
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||    
T  10254739 gagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatgattttctcaaatccataattttttcaaagtttgttata 10254640  T
Q  301 tcc 303  Q
    |||    
T  10254639 tcc 10254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 12838246 - 12838145
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    |||||||||| ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12838246 agaaaacttatgtacaattctttaggtgtttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 12838147  T
Q  302 cc 303  Q
    ||    
T  12838146 cc 12838145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 202 - 303
Target Start/End: Original strand, 32237396 - 32237497
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||    
T  32237396 agaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaatttaccatgattttctcagatccataattttctcaaagtttgttatat 32237495  T
Q  302 cc 303  Q
    ||    
T  32237496 cc 32237497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 25488341 - 25488444
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  25488341 ggagaaatcttaagtacaattccttaggtgcttttcgtatagttcttaactaaattcaccatgatttcttcatatccataattttctcaaagtttgttat 25488440  T
Q  300 atcc 303  Q
    ||||    
T  25488441 atcc 25488444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 25561182 - 25561079
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  25561182 ggagaaatcttaagtacaattccttaggtgcttttcgtatagttcttaactaaattcaccatgatttcttcatatccataattttctcaaagtttgttat 25561083  T
Q  300 atcc 303  Q
    ||||    
T  25561082 atcc 25561079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 35368904 - 35368801
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35368904 ggagaaaacttaggtacaatttcttatgtgtttttcgtatggtttttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttat 35368805  T
Q  300 atcc 303  Q
    ||||    
T  35368804 atcc 35368801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 36822760 - 36822863
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||| |||||||||||||||||||||||||||    
T  36822760 ggagaaaacttaggtacaattccttagctgcttttcgtatggttcttaactaaaaataccatgatttcctcagatccataattttctcaaagtttgttat 36822859  T
Q  300 atcc 303  Q
    ||||    
T  36822860 atcc 36822863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 43639081 - 43639184
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||| || |||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43639081 ggagaaaacttagttataattccttaggtgcttttcgtatgattcttaaccaaattcaccatgatttcttcaaatccataattttctcaaagtttgttat 43639180  T
Q  300 atcc 303  Q
    ||||    
T  43639181 atcc 43639184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 36657433 - 36657535
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  36657433 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttat 36657532  T
Q  300 atc 302  Q
    |||    
T  36657533 atc 36657535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 12789777 - 12789674
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||| |||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  12789777 ggagaaaactttggtagaattccttaggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaattcataattttttcaaagtttgttat 12789678  T
Q  300 atcc 303  Q
    ||||    
T  12789677 atcc 12789674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 201 - 303
Target Start/End: Original strand, 13723989 - 13724090
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  13723989 gagaaaacttaggtacaatttcttaggtgctttttgtatggttctta-ctaaattcaccatgatttcttcaaattcataattttctcaaagtttgttata 13724087  T
Q  301 tcc 303  Q
    |||    
T  13724088 tcc 13724090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 39850344 - 39850448
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctca-aagtttgtta 298  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||||||||    
T  39850344 ggagaaaacttaggtactattccttaggtgtttttcgtatggttcttaactaaaaataccatgatttcctcaaatccataattttctcacaagtttgtta 39850443  T
Q  299 tatcc 303  Q
    |||||    
T  39850444 tatcc 39850448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 204 - 299
Target Start/End: Original strand, 1476555 - 1476650
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  1476555 aaaacttaggtacaattccttaggtgcttttggtatggttctaacctaaattcaccatgatttccttaaatccataattctctcaaagtttgttat 1476650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 10117682 - 10117584
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     |||| ||||||||||||||||||||||||||||||||    
T  10117682 ggagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaattca-----attttctcaaatccataattttctcaaagtttgttat 10117588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 10441258 - 10441361
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||| |||||||||||||||||||||| ||||| ||||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  10441258 ggagaaaacttaagtacaattccttaggtgcttttggtatgattcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttat 10441357  T
Q  300 atcc 303  Q
    ||||    
T  10441358 atcc 10441361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 45712903 - 45713006
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||||||||||||  | |  |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  45712903 ggagaaaacttaggtacaattccttaggtgctttttttttttttcttaactaaattcaccatgatttcctcaaagccataattttatcaaagtttgttat 45713002  T
Q  300 atcc 303  Q
    ||||    
T  45713003 atcc 45713006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 55340293 - 55340396
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||| |||||||||||| |||| ||| |||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  55340293 ggagaaaatttaggtacaatttcttatgtgtttttcgtatgattcttaactatattcaccatgattttctcaaatccataattttctcaaagtttgttat 55340392  T
Q  300 atcc 303  Q
    ||||    
T  55340393 atcc 55340396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 44611382 - 44611483
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||| ||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  44611382 ggagaaaacttag-tacaattccttaggtactttttgtatagttcttaactaaattcaccatgatttcttcaaattcataattttctcaaagtttgttat 44611480  T
Q  300 atc 302  Q
    |||    
T  44611481 atc 44611483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 404213 - 404113
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||||||| |||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  404213 agaaaacttag-tacaattctttagatgctttccgtatggttcttaactaaattcaccatgatttcctcaagtctataattttctcaaagtttgttatat 404115  T
Q  302 cc 303  Q
    ||    
T  404114 cc 404113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 46679432 - 46679329
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||| |||||||||||| | |||||||  || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  46679432 ggagaaaacttaagtacaattccttggatgctttttatacggttcttaactaaattcaccataatttcctcaaatccataattttctcaaagtttgttaa 46679333  T
Q  300 atcc 303  Q
    ||||    
T  46679332 atcc 46679329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 201 - 303
Target Start/End: Complemental strand, 10017279 - 10017182
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||     |||||| |||||||| ||||||||||||||||| |||||||||||||||    
T  10017279 gagaaaatttaggtacaattccttaggtgcttttcgtatggttctt-----aattcatcatgattttctcaaatccataattttttcaaagtttgttata 10017185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 200 - 294
Target Start/End: Original strand, 26976842 - 26976936
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagttt 294  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||| |||||| |  ||||||| |||||||||||||||||||||||||||    
T  26976842 ggagaaaacttaggtacaatttcttaggtgcttttcgtatagttcttaattaaatttagtatgattttctcaaatccataattttctcaaagttt 26976936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 200 - 294
Target Start/End: Complemental strand, 26977861 - 26977767
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagttt 294  Q
    ||||||||||||||||||||| ||||| | |||||| ||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||    
T  26977861 ggagaaaacttaggtacaatttcttagatacttttcatatggttcttaactaaatttagtatgatttcctcaaatccataattttctcaaagttt 26977767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 204 - 299
Target Start/End: Original strand, 42105387 - 42105482
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||| | ||||| |||||| ||||||||||||||||||||||| |||||| || |||||||||||| ||||||||||||||||    
T  42105387 aaaacttaggtacaatttcataggtacttttcttatggttcttaactaaattcaccgtgattttcttaaatccataattctctcaaagtttgttat 42105482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 43150649 - 43150548
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||| || |||||| ||| |||||| |||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  43150649 ggagaaaacttag-tagaattccatagatgcttt-cgtatgattcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttat 43150552  T
Q  300 atcc 303  Q
    ||||    
T  43150551 atcc 43150548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 204 - 301
Target Start/End: Original strand, 297541 - 297638
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||| || |  |||| || |||||||||||||||||| ||||||||||||    
T  297541 aaaacttaggtacaattcctttggtgcttttcgtatggttcttagctaaatttactacaattttctgaaatccataattttctcatagtttgttatat 297638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 204 - 303
Target Start/End: Complemental strand, 5530059 - 5529960
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    |||| |||||||||||| |||| ||||||||||||||||| |||||||||   ||||||||||| | ||||| ||||||||||||||||||| |||||||    
T  5530059 aaaatttaggtacaatttcttaagtgcttttcgtatggttattaactaaaaataccatgatttctttaaatctataattttctcaaagtttgatatatcc 5529960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 21969328 - 21969275
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21969328 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 21969275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 21991764 - 21991711
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21991764 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 21991711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 214 - 303
Target Start/End: Original strand, 44920661 - 44920749
Alignment:
Q  214 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    ||||||||||||| |||||||| ||||||||||||||||||| || ||||||| |||||||  |||||||||||||||||| ||||||||    
T  44920661 tacaattccttag-tgcttttcttatggttcttaactaaatttacaatgattttctcaaatttataattttctcaaagtttattatatcc 44920749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 45487799 - 45487852
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45487799 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 45487852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 204 - 301
Target Start/End: Complemental strand, 49984098 - 49984001
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    |||||||||||| ||||  |||||| ||||||||| | ||||||||||||||||||||||||| || |||||||||||||| ||||| ||| ||||||    
T  49984098 aaaacttaggtataattttttaggtacttttcgtacgattcttaactaaattcaccatgattttcttaaatccataattttttcaaaatttattatat 49984001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 156978 - 157069
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    ||||||||||| ||||||||||||||||||         |||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||    
T  156978 gagaaaacttaagtacaattccttaggtgc---------ggttcttaactaaatttatcataatttcctcaaatccataattttctcaaagtttgttata 157068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 296
Target Start/End: Original strand, 46222032 - 46222124
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgt 296  Q
    ||||| ||| ||||||| |||||||| ||||||||||||| |||||||||||||||||||||| || |||| ||||||||||||  |||||||    
T  46222032 aaaacctagttacaatttcttaggtgtttttcgtatggtttttaactaaattcaccatgattttcttaaattcataattttctcttagtttgt 46222124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 36329188 - 36329283
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||| ||||| | ||||| |||| |||||||| |||||||        |||||||||||||||||||||||||||||||||||    
T  36329188 ggagaaaacttaggtacaatttcttagatactttttgtattgttcttaaataaattc--------ttcctcaaatccataattttctcaaagtttgttat 36329279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 4072445 - 4072392
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4072445 ggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 4072392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 12789606 - 12789659
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12789606 ggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 12789659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 25488512 - 25488459
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25488512 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 25488459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 25561011 - 25561064
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25561011 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 25561064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 26906454 - 26906507
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26906454 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 26906507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 32237565 - 32237512
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32237565 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaa 32237512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 35368549 - 35368602
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35368549 ggagaaaacttaggtacaattccttatgtgcttttcgtatggttcttaactaaa 35368602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 36278927 - 36278874
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36278927 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 36278874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 36657604 - 36657551
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36657604 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 36657551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 39850516 - 39850463
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39850516 ggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaa 39850463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 5529892 - 5529944
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5529892 gagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 5529944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 10017115 - 10017167
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10017115 gagaaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaa 10017167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 10254569 - 10254621
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10254569 gagaaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaa 10254621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 205 - 301
Target Start/End: Complemental strand, 46664342 - 46664246
Alignment:
Q  205 aaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||| ||||||||| |||||||||||||||||| || ||||  |||   | ||| |||||||||||| ||||||||||||||||||||||||||    
T  46664342 aaacttatgtacaattctttaggtgcttttcgtatgatttttaataaaaaatatcataatttcctcaaattcataattttctcaaagtttgttatat 46664246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 43639251 - 43639200
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43639251 agaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaa 43639200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 45713071 - 45713021
Alignment:
Q  203 gaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45713071 gaaaacttaggtacaattccttaggtgcttttcgtatggttctaaactaaa 45713021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 1476718 - 1476669
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1476718 aaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaa 1476669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 3970662 - 3970609
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  3970662 ggagaaaacttaggtacaatttcttaggtacttttcgtatggttcttaactaaa 3970609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 8831744 - 8831793
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8831744 aaaacttaggtacaattccttaggtgcttttcgtatggttctaaactaaa 8831793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 10441429 - 10441376
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  10441429 ggagaaaacttaggtacaattccttaggtgcttttggtacggttcttaactaaa 10441376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 36822931 - 36822878
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  36822931 ggagaaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaa 36822878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 38125350 - 38125297
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  38125350 ggagaaaacttaggtacaattcattaggtgtttttcgtatggttcttaactaaa 38125297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 10117516 - 10117568
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  10117516 gagaaaacttaggtacagttccttaggtgcttttcatatggttcttaactaaa 10117568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 299
Target Start/End: Original strand, 37506130 - 37506225
Alignment:
Q  203 gaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||| || ||| |||||| ||| ||||  ||||||||||||||||||| || ||||||| || |||| ||||||||||||||||||||||||    
T  37506130 gaaaacttaagtgcaactccttaagtgttttttctatggttcttaactaaatttac-atgattttcttaaattcataattttctcaaagtttgttat 37506225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 12838079 - 12838130
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  12838079 agaaaacttatgtacaattccttaggtgctttttgtatggttcttaactaaa 12838130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 37537011 - 37536941
Alignment:
Q  230 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    ||||| ||||||||||||||||||||    || |||||||| |||||||||||||||||||||||||||||    
T  37537011 ctttttgtatggttcttaactaaattatttataatttcctctaatccataattttctcaaagtttgttata 37536941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 13078334 - 13078281
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  13078334 ggagaaaacttaggtacaatttcttaggtacttttcgtatgattcttaactaaa 13078281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 299
Target Start/End: Original strand, 39677312 - 39677373
Alignment:
Q  238 atggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||| ||||||||| ||||||| ||||||| ||||||||| ||||||||||||||    
T  39677312 atggttcttaattaaattcactatgattttctcaaattcataattttttcaaagtttgttat 39677373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 43150480 - 43150533
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||    
T  43150480 ggagaaaacttaggtgcaattcctcaggtgcttttcgtatggtttttaactaaa 43150533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 404044 - 404097
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||| |||||||| ||||||||||||||||||| || |||||||||    
T  404044 ggagaaaacttacgtacaatttcttaggtgcttttcgtatgatttttaactaaa 404097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 25446251 - 25446302
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  25446251 ggagaaaacttag-tacaattccttag-tgcttttcgtatggttcttaactaaa 25446302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 26977009 - 26976960
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  26977009 aaaacttaggtacaattctttaggtgtttttcgtatggtttttaactaaa 26976960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 32362861 - 32362914
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||  |||||||| ||||||| |||||||||||||||||||||||    
T  32362861 ggagaaaacttaactacaattctttaggtgtttttcgtatggttcttaactaaa 32362914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 36329351 - 36329298
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||  ||| |||||||| |||||||||||||||||||||||||||||||    
T  36329351 ggagaaaaggtagctacaattctttaggtgcttttcgtatggttcttaactaaa 36329298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 55340465 - 55340412
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||| |||||||||||||||  ||||| |||||||||||||||||    
T  55340465 ggagaaaacttagatacaattccttaggtatttttcatatggttcttaactaaa 55340412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 302
Target Start/End: Complemental strand, 4567322 - 4567250
Alignment:
Q  230 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 302  Q
    |||||||||||||||||| ||||||| | || | ||||||||||| |||  ||||||||| ||||||||||||    
T  4567322 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 4567250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 32363188 - 32363122
Alignment:
Q  237 tatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    ||||||| ||||||||||| || || |||| ||||||||||||||||| | ||| ||||||||||||    
T  32363188 tatggttattaactaaatttacaataattttctcaaatccataattttttaaaaatttgttatatcc 32363122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 44611545 - 44611499
Alignment:
Q  207 acttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||| |||| |||||||| |||||||||    
T  44611545 acttaggtacaattccttaggtgttttttgtatggtttttaactaaa 44611499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 37506293 - 37506244
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| ||||||||| ||||||| ||||||| |||||||||||||||    
T  37506293 aaaacttatgtacaattctttaggtgtttttcgtgtggttcttaactaaa 37506244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 46664176 - 46664229
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| |||||||||||| |||||||  ||||||||| |||||||||||||    
T  46664176 ggagaaaatttaggtacaatttcttaggtatttttcgtatagttcttaactaaa 46664229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 241
Target Start/End: Original strand, 46679289 - 46679330
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatgg 241  Q
    |||||||||||||||||||||||||| ||||||| |||||||    
T  46679289 ggagaaaacttaggtacaattccttaagtgctttgcgtatgg 46679330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 300
Target Start/End: Complemental strand, 19954012 - 19953917
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    |||| ||||||||| | | |||||||||||| | | |||||||||||||| |  | ||||||||||||||| ||||||||  | |||||||||||||    
T  19954012 aaaatttaggtacattcctttaggtgctttt-gaacggttcttaactaaaatatctatgatttcctcaaattcataatttgtttaaagtttgttata 19953917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 157140 - 157087
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||  ||||||| ||||||||||||| |||| ||||||| |||||    
T  157140 ggagaaaacttatatacaatttcttaggtgcttttggtatagttcttagctaaa 157087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 13724159 - 13724106
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||| ||||||||||||||||||| || |||||||||  || |||||||||    
T  13724159 ggagaaatcttaggtacaattccttagatgtttttcgtataatttttaactaaa 13724106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 42105550 - 42105501
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| |||||||| | |||||| |||| ||||||||||||||||||    
T  42105550 aaaacttaagtacaatttcgtaggtgttttttgtatggttcttaactaaa 42105501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 50099432 - 50099485
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| | | ||||||||| ||||||||||||||||||||| |||| ||||    
T  50099432 ggagaaaattcatgtacaattcgttaggtgcttttcgtatggtttttaattaaa 50099485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 27240924 - 27241027
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27240924 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttat 27241023  T
Q  300 atcc 303  Q
    ||||    
T  27241024 atcc 27241027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 19954911 - 19955014
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19954911 ggagaaaacttaggtacaattccttatgtgcttttcgtatagttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 19955010  T
Q  300 atcc 303  Q
    ||||    
T  19955011 atcc 19955014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 47940570 - 47940673
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  47940570 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttat 47940669  T
Q  300 atcc 303  Q
    ||||    
T  47940670 atcc 47940673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 40647289 - 40647188
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40647289 ggagaaaacttaggtacaattccttaggtgcttttcgtatgatttttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 40647190  T
Q  300 at 301  Q
    ||    
T  40647189 at 40647188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 5189638 - 5189537
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5189638 agaaaatttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatat 5189539  T
Q  302 cc 303  Q
    ||    
T  5189538 cc 5189537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 202 - 303
Target Start/End: Original strand, 14387017 - 14387118
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14387017 agaaaacttaggtacaattccttagatgcatttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttattatat 14387116  T
Q  302 cc 303  Q
    ||    
T  14387117 cc 14387118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 2854532 - 2854635
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  2854532 ggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttat 2854631  T
Q  300 atcc 303  Q
    ||||    
T  2854632 atcc 2854635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 9978051 - 9978154
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9978051 ggagaaaatttaggtacaattccttatgtgcttttcgtatgattcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgttat 9978150  T
Q  300 atcc 303  Q
    ||||    
T  9978151 atcc 9978154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 23698502 - 23698605
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  23698502 ggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttat 23698601  T
Q  300 atcc 303  Q
    ||||    
T  23698602 atcc 23698605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 42561295 - 42561398
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  42561295 ggagaaatcttaagtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcttcatatccataattttctcaaagtttgttat 42561394  T
Q  300 atcc 303  Q
    ||||    
T  42561395 atcc 42561398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 48954214 - 48954317
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  48954214 ggagaaaacttaggtacaattccttaggtacttttcatatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttat 48954313  T
Q  300 atcc 303  Q
    ||||    
T  48954314 atcc 48954317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 51789597 - 51789699
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  51789597 ggagaaaacttaggtacaattccttaggtgattttcgtatggtttttaactaaattcaccatgatttcctcaattccataattttctcaaagtatgttat 51789696  T
Q  300 atc 302  Q
    |||    
T  51789697 atc 51789699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 15324796 - 15324695
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    |||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15324796 agaaaatttatgtacaattccttatgtgcttttcgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgttatat 15324697  T
Q  302 cc 303  Q
    ||    
T  15324696 cc 15324695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 26208596 - 26208493
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  26208596 ggagaaaacttatgtataattccttaggtgcttttcgtatggttctgaactaaattcaccataatttcttcaaatccataattttctcaaagtttgttat 26208497  T
Q  300 atcc 303  Q
    ||||    
T  26208496 atcc 26208493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 201 - 303
Target Start/End: Original strand, 3607730 - 3607832
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    ||||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3607730 gagaaaatttaggtagaatttcttaggtgctttttgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgttata 3607829  T
Q  301 tcc 303  Q
    |||    
T  3607830 tcc 3607832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 200 - 298
Target Start/End: Complemental strand, 36880682 - 36880584
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 298  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  36880682 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaataccatgatttcctcaaatccataattttctcaaagtttgtta 36880584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 27926251 - 27926353
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||    
T  27926251 ggagaaaacttaggtataattccttatgtgcttttcgtatggttcttaactaaattcactgtgatttcctc-aatccataattttctcaaagtttgttat 27926349  T
Q  300 atcc 303  Q
    ||||    
T  27926350 atcc 27926353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 50627302 - 50627199
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  50627302 ggagaaaacttaggtacaattccttatatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttat 50627203  T
Q  300 atcc 303  Q
    ||||    
T  50627202 atcc 50627199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 204 - 302
Target Start/End: Complemental strand, 957756 - 957658
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 302  Q
    ||||||||| ||||||| |||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  957756 aaaacttagatacaatttcttaggtgtttttcgtatgattcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatc 957658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 201 - 303
Target Start/End: Complemental strand, 1387948 - 1387846
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| ||||||||||||||||||| |||||    
T  1387948 gagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaagataccatgatttcctcaaattcataattttctcaaagtttattata 1387849  T
Q  301 tcc 303  Q
    |||    
T  1387848 tcc 1387846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 201 - 303
Target Start/End: Original strand, 19796982 - 19797084
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||   |||||||||||||||||||||||||||| |||||||||||||||    
T  19796982 gagaaaacttaggtacaatttcttaggtgcttttcgtatggtttttaactaaaaataccatgatttcctcaaatccataattttttcaaagtttgttata 19797081  T
Q  301 tcc 303  Q
    |||    
T  19797082 tcc 19797084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 229 - 303
Target Start/End: Complemental strand, 6079526 - 6079452
Alignment:
Q  229 gcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6079526 gcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 6079452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 199 - 301
Target Start/End: Original strand, 51276694 - 51276796
Alignment:
Q  199 cggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 298  Q
    ||||||||| ||||||| |||| | ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||    
T  51276694 cggagaaaatttaggtataatttcataggtgcttttcgtatggttcttaactaaattcattatgatttcctcaaatccataattttctcaaagtttatta 51276793  T
Q  299 tat 301  Q
    |||    
T  51276794 tat 51276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 204 - 303
Target Start/End: Original strand, 27928302 - 27928400
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    ||||||||| |||||||||||| |||||||| |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||    
T  27928302 aaaacttagatacaattccttatgtgctttttgtatggttcttaactaaattcactgtgatttcctc-aatccataattttctcaaagtttgttatatcc 27928400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 204 - 303
Target Start/End: Original strand, 49284298 - 49284397
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    ||||||||||||||||| ||||| || |||| ||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||    
T  49284298 aaaacttaggtacaatttcttagttgttttttgtatggttcttaactaaattcaccatgattttcttaaatccataattttttcaaagtttgttatatcc 49284397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 50162538 - 50162641
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||||||  |||| |||||||| |||| |||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  50162538 ggagaaaacttaggtacaattccttaggtattttttgtatggtttttaattaaattcaccgtgattttctcaaatctataattttctcaaagtttgttat 50162637  T
Q  300 atcc 303  Q
    ||||    
T  50162638 atcc 50162641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 204 - 303
Target Start/End: Original strand, 50856325 - 50856424
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    |||||||||||| ||||| |||||||||||||||||| |||||| ||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  50856325 aaaacttaggtaaaattctttaggtgcttttcgtatgattcttagctaaattcaccattatttcctcaagtccataattttctcaaaatttgttatatcc 50856424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 27670315 - 27670213
Alignment:
Q  200 ggagaaaacttaggt-acaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 298  Q
    ||||||||||||||  ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||| |||    
T  27670315 ggagaaaacttagggcacaattccttatgtgcttttcgtatggtttttaactaaattcatcatgatttccttaaatccataattttctcaaagtttttta 27670216  T
Q  299 tat 301  Q
    |||    
T  27670215 tat 27670213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 4299414 - 4299495
Alignment:
Q  222 cttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    ||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4299414 cttaggtacttttcgtatggctcttaactaaattcaccattatttcctcaaatccataattttctcaaagtttgttatatcc 4299495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 194 - 303
Target Start/End: Complemental strand, 21930555 - 21930449
Alignment:
Q  194 ttcgacggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtt 293  Q
    ||||| |||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||   ||||| | |||||||||||||||| ||||||    
T  21930555 ttcgaaggagaaaatttaggtacaattacttaggtgtttttcgtatggttcttaactaaattcacc---atttctttaaatccataattttcttaaagtt 21930459  T
Q  294 tgttatatcc 303  Q
    ||||||||||    
T  21930458 tgttatatcc 21930449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 2125070 - 2125172
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||| |||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||  | ||||  |||||||||||||||||||||||    
T  2125070 ggagaaaatttagttacaatttcttatgtgcttttcgtatggttcttaactaaattcaccatgatttttttaaatttataattttctcaaagtttgttat 2125169  T
Q  300 atc 302  Q
    |||    
T  2125170 atc 2125172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 222 - 302
Target Start/End: Original strand, 48645036 - 48645116
Alignment:
Q  222 cttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 302  Q
    ||||||||||||||||||| ||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||    
T  48645036 cttaggtgcttttcgtatgcttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatc 48645116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 204 - 303
Target Start/End: Original strand, 22338988 - 22339087
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    ||||||| |||||||||||| || |||||||||  ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||| |||| |||||    
T  22338988 aaaacttgggtacaattcctaagttgcttttcgattggttcttaactaaactcaccatgatttcatcaaatccatcattttctcaaagtctgttctatcc 22339087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 204 - 300
Target Start/End: Original strand, 36007824 - 36007920
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    ||||||| ||| || ||||||||||| |||| ||| |||||||||||||| |  ||||||||||||||||| |||||||||||||||||||||||||    
T  36007824 aaaacttgggtgcatttccttaggtgtttttggtacggttcttaactaaactatccatgatttcctcaaatacataattttctcaaagtttgttata 36007920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 5189469 - 5189522
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5189469 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 5189522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 19797152 - 19797099
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19797152 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 19797099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 49285146 - 49285093
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49285146 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 49285093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 9978222 - 9978170
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9978222 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 9978170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 362528 - 362461
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttc 267  Q
    |||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||    
T  362528 ggagaaaatttaggtacaattctttaggtgcttttcgtatgattcttaactaaatttaccatgatttc 362461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 303
Target Start/End: Original strand, 16518302 - 16518403
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa--attcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||||||| ||||| ||||||||||||| |||||||| ||||||||  ||||||||| |||| ||||| | ||||||||||||| |||||||| |||    
T  16518302 aaaacttaggtgcaatttcttaggtgcttttggtatggtttttaactaaatattcaccataattttctcaattacataattttctcatagtttgttgtat 16518401  T
Q  302 cc 303  Q
    ||    
T  16518402 cc 16518403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 2854703 - 2854650
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2854703 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 2854650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 3607900 - 3607847
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3607900 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 3607847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 4299566 - 4299513
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4299566 ggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 4299513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 15324626 - 15324679
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15324626 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 15324679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 23698673 - 23698620
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23698673 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 23698620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 27926423 - 27926370
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27926423 ggagaaaacttatgtacaattccttaggtgcttttcgtatggttcttaactaaa 27926370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 29598450 - 29598393
Alignment:
Q  244 cttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  29598450 cttaactaaattcactatgatttccttaaatccataattttctcaaagtttgttatat 29598393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 42561466 - 42561413
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42561466 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 42561413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 47940742 - 47940689
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47940742 ggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 47940689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 48954385 - 48954332
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  48954385 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 48954332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 50627131 - 50627184
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50627131 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 50627184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 14387185 - 14387133
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14387185 gagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 14387133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 25298018 - 25297966
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa 252  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25298018 ggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaa 25297966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 50162708 - 50162657
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  50162708 agaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 50162657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 29598508 - 29598450
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcac 258  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  29598508 ggagaaaacttaggtacaattcgttaggtactttttgtatggttcttaactaaattcac 29598450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 19955082 - 19955029
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  19955082 ggagaaaacttaggtacaattccttaggtactttttgtatggttcttaactaaa 19955029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 27241095 - 27241042
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  27241095 ggagaaaacttaggtacaattcgttaggtgctttgcgtatggttcttaactaaa 27241042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 27928469 - 27928416
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  27928469 ggagaaaacttatgtacaattccttaggtgtttttcgtatggttcttaactaaa 27928416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 303
Target Start/End: Original strand, 35547714 - 35547803
Alignment:
Q  214 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    ||||||| |||| ||||||||  ||||||||||||||||| ||||||| ||||| | ||||||||||||||||  ||||||| |||||||    
T  35547714 tacaatttcttatgtgctttttatatggttcttaactaaaatcaccataatttctttaaatccataattttctataagtttgatatatcc 35547803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 51789766 - 51789713
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  51789766 ggagaaaacttaggtacaattccttaaatgcttttcgtatggttcttaactaaa 51789713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 2302533 - 2302481
Alignment:
Q  241 gttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtt 293  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  2302533 gttcttaacaaaattcaccatgatttcctcaaattcataattttctcaaagtt 2302481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 51276865 - 51276813
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  51276865 gagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttagctaaa 51276813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 2125241 - 2125188
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  2125241 ggagaaaatttaggtacaatttcttaggtgcttttcgtatagttcttaactaaa 2125188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 9895367 - 9895322
Alignment:
Q  257 accatgatttcctcaaatccataattttctcaaagtttgttatatc 302  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  9895367 accatgatttcctcaaatacataattttctcaaagtttgttatatc 9895322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 40647116 - 40647169
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||||||||    
T  40647116 ggagaaaacttagttacaattccttagctgcttttcgtgtggttcttaactaaa 40647169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 303
Target Start/End: Complemental strand, 28244119 - 28244026
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    ||||||| ||||||||| ||||  || |||| ||||  ||||||||||||||||      |||||| |||||||||||||||||||||||||||||||||    
T  28244119 aaaacttcggtacaatttcttatatgttttttgtataattcttaactaaattca------tttccttaaatccataattttctcaaagtttgttatatcc 28244026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 39015225 - 39015293
Alignment:
Q  232 tttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    ||||||||||||||| | | || | ||||||||||| ||||||||||||||||||||||||| ||||||    
T  39015225 tttcgtatggttctttaattaactaaccatgatttcttcaaatccataattttctcaaagttcgttata 39015293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 22339151 - 22339102
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||||||||    
T  22339151 aaaacttaggtgcaattctttaggtgcttttcatatggttcttaactaaa 22339102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 303
Target Start/End: Original strand, 28431733 - 28431805
Alignment:
Q  231 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    |||||||||| || ||||||||||||| ||||||||| ||||||| |||||||| | ||| ||| ||||||||    
T  28431733 ttttcgtatgatttttaactaaattcatcatgatttcttcaaatctataatttttttaaaatttattatatcc 28431805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 247
Target Start/End: Original strand, 25297922 - 25297968
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttctta 247  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  25297922 ggagaaaacttag-tacaattccttaggtgcttttcgtatgattctta 25297968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 1387780 - 1387831
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  1387780 ggagaaaacttac-tacaattccttag-tgcttttcgtatggttcttaactaaa 1387831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 302
Target Start/End: Original strand, 5059568 - 5059664
Alignment:
Q  208 cttaggtacaattccttaggtgcttttcgtatgg--ttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 302  Q
    |||||||  ||||| ||| |||||||||||||    ||||||| |||||| ||||| ||||  | |||||||||||||| |||||||||||||||||    
T  5059568 cttaggtggaattctttatgtgcttttcgtatataattcttaattaaatttaccataatttttttaaatccataattttatcaaagtttgttatatc 5059664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 6079384 - 6079437
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||| |||||||||||||||| || |||||||| ||||||| ||||||    
T  6079384 ggagaaaactcaggtacaattccttagatgtttttcgtacggttcttcactaaa 6079437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 9895253 - 9895306
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| ||||||| ||||  |||||| ||||||||||||||||||||||||    
T  9895253 ggagaaaatttaggtataattttttaggtacttttcgtatggttcttaactaaa 9895306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 21930380 - 21930433
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||| || || ||||||||||||| || |||||||||||||||||||||||    
T  21930380 ggagaaacctcagttacaattccttagttgtttttcgtatggttcttaactaaa 21930433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 36880289 - 36880342
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||  ||| ||| |||||||||||||| ||||||||    
T  36880289 ggagaaaacttaggtacaattttttaagtgtttttcgtatggttcctaactaaa 36880342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 300
Target Start/End: Original strand, 18651310 - 18651350
Alignment:
Q  260 atgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  18651310 atgatttccccaaatccataattttctcaaaatttgttata 18651350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 303
Target Start/End: Original strand, 48958233 - 48958309
Alignment:
Q  226 ggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    |||| |||| ||||| ||||| | |||||||| ||| ||||| | |||| |||||||||||| |||||||||||||||    
T  48958233 ggtgtttttggtatgattcttgattaaattcatcataatttctttaaatacataattttctc-aagtttgttatatcc 48958309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 16518468 - 16518424
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 248  Q
    ||||||||||| |||||| |||| | |||||||||||||||||||    
T  16518468 aaaacttaggtgcaattctttagatacttttcgtatggttcttaa 16518424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 96; Significance: 4e-47; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 46005 - 45902
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  46005 ggagaaaacttaggtacaattccttaggtgcttttcttatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttat 45906  T
Q  300 atcc 303  Q
    ||||    
T  45905 atcc 45902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 45834 - 45887
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45834 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 45887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 4e-47; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 1923980 - 1924083
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1923980 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttat 1924079  T
Q  300 atcc 303  Q
    ||||    
T  1924080 atcc 1924083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 24101832 - 24101935
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  24101832 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaatataccatgatttcctcaaatccataattttctcaaagtttgttat 24101931  T
Q  300 atcc 303  Q
    ||||    
T  24101932 atcc 24101935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 45408796 - 45408693
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45408796 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaatttaccatgatttcctcaaatccataattttctcaaagtttgttat 45408697  T
Q  300 atcc 303  Q
    ||||    
T  45408696 atcc 45408693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 2818837 - 2818734
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  2818837 ggagaaaacttaggtacaattctttaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgatat 2818738  T
Q  300 atcc 303  Q
    ||||    
T  2818737 atcc 2818734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 7737236 - 7737133
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  7737236 ggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaatttaccatgatttcctcaaagccataattttctcaaagtttgttat 7737137  T
Q  300 atcc 303  Q
    ||||    
T  7737136 atcc 7737133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 27920743 - 27920640
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27920743 ggagaaaacttaggtacaattttttagctgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttttcaaagtttgttat 27920644  T
Q  300 atcc 303  Q
    ||||    
T  27920643 atcc 27920640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 34490627 - 34490524
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||||||||||||||||||    
T  34490627 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaataccatgatttcctcagatccataattttctcaaagtttgttat 34490528  T
Q  300 atcc 303  Q
    ||||    
T  34490527 atcc 34490524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 3117047 - 3116944
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||    
T  3117047 ggagaaaacttaggtacaattccatagctgcttttcgtatggttcttaactaaattcattatgattttctcaaatccataattttctcaaagtttgttat 3116948  T
Q  300 atcc 303  Q
    ||||    
T  3116947 atcc 3116944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 9281347 - 9281450
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  9281347 ggagaaaactttggtacaattccttaggtacttttcatatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttat 9281446  T
Q  300 atcc 303  Q
    ||||    
T  9281447 atcc 9281450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 43476117 - 43476014
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  43476117 ggagaaaatttaggtataattccttaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttattat 43476018  T
Q  300 atcc 303  Q
    ||||    
T  43476017 atcc 43476014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 6605905 - 6605803
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  6605905 ggagaaaacttaggtacaattctttaggtgctttttgtatggttctta-ctaaatttaccatgatttcctcaaatgcataattttctcaaagtttgttat 6605807  T
Q  300 atcc 303  Q
    ||||    
T  6605806 atcc 6605803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 204 - 303
Target Start/End: Original strand, 12850546 - 12850645
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    |||| |||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12850546 aaaatttaggtacaattccttaggtactttttgtatggtttttaactaaatttaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 12850645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 16705904 - 16705801
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||||||| ||||||||||||||    
T  16705904 ggagaaaatttaggtacaattccttaggtgcttttcgtatggtttttaactaaattcactatgattttctcaaagccataattttatcaaagtttgttat 16705805  T
Q  300 atcc 303  Q
    ||||    
T  16705804 atcc 16705801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 22269893 - 22269790
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  22269893 ggagaaaacttacgtacaattccttagatgcttttcgtatggttcttaactaaaaaaaacatgatttcctcaaatccataattttctcaaagtttgttat 22269794  T
Q  300 atcc 303  Q
    ||||    
T  22269793 atcc 22269790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 42713777 - 42713880
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||| |||| || ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  42713777 ggagaaaatttagatataattccttaggtgtttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttattat 42713876  T
Q  300 atcc 303  Q
    ||||    
T  42713877 atcc 42713880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 9933570 - 9933671
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  9933570 ggagaaaacttaggtacaattcattag-tgcttttcctatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttattat 9933668  T
Q  300 atc 302  Q
    |||    
T  9933669 atc 9933671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 202 - 303
Target Start/End: Complemental strand, 34456054 - 34455953
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    |||||| |||||||||||| |||| ||| |||||||||||||| ||| |||||||| ||| ||||||||||||| |||||||||||||||||||||||||    
T  34456054 agaaaatttaggtacaatttcttatgtgtttttcgtatggttcctaattaaattcatcataatttcctcaaatctataattttctcaaagtttgttatat 34455955  T
Q  302 cc 303  Q
    ||    
T  34455954 cc 34455953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 9850781 - 9850860
Alignment:
Q  223 ttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 302  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||| |||||||||||    
T  9850781 ttaggtgcttttcgtatggttcttaactaaatttaccatgattttcttaaatccataattttctcaaaatttgttatatc 9850860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 20893055 - 20892953
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||| || |||||||||||||||||||||||| ||||||||||||   || || ||||| |||||||||||||||||||||||||||||||    
T  20893055 ggagaaaacttag-tataattccttaggtgcttttcgtatgattcttaactaaaaatacaataatttcatcaaatccataattttctcaaagtttgttat 20892957  T
Q  300 atcc 303  Q
    ||||    
T  20892956 atcc 20892953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 29229361 - 29229467
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgctttt--cgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctc-aaagtttgt 296  Q
    ||||||||||||||||||||| |||| ||||||||  |||||| |||||||||| ||||| ||||||||||||||||||||||||||||| ||||||| |    
T  29229361 ggagaaaacttaggtacaattacttatgtgcttttttcgtatgattcttaactatattcatcatgatttcctcaaatccataattttctcaaaagtttat 29229460  T
Q  297 tatatcc 303  Q
    |||||||    
T  29229461 tatatcc 29229467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 29342661 - 29342767
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgctttt--cgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctc-aaagtttgt 296  Q
    ||||||||||||||||||||| |||| ||||||||  |||||| |||||||||| ||||| ||||||||||||||||||||||||||||| ||||||| |    
T  29342661 ggagaaaacttaggtacaattacttatgtgcttttttcgtatgattcttaactatattcatcatgatttcctcaaatccataattttctcaaaagtttat 29342760  T
Q  297 tatatcc 303  Q
    |||||||    
T  29342761 tatatcc 29342767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 23836018 - 23835945
Alignment:
Q  230 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23836018 cttttcgtatggtttttaacaaaatttaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 23835945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 207 - 303
Target Start/End: Complemental strand, 7116534 - 7116438
Alignment:
Q  207 acttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    |||||||||||||| ||||| || |||||||||||||||||| |||||| ||||| ||||| ||||||||||||||||||||||| ||||| |||||    
T  7116534 acttaggtacaatttcttagatgtttttcgtatggttcttaaataaatttaccataatttcatcaaatccataattttctcaaagattgttctatcc 7116438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 10553051 - 10552986
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattt 266  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  10553051 gagaaaacttaggtacaattccttaggtgtttttcgtatgattcttaactaaattcaccatgattt 10552986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 206 - 301
Target Start/End: Complemental strand, 40362647 - 40362553
Alignment:
Q  206 aacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||||||||| ||| |   || |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  40362647 aacttaggtacaactccgtgtatgtttttcgtatggttcttaactaaattcaccatgattttctcaaat-cataattttctcatagtttgttatat 40362553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 16705733 - 16705786
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16705733 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 16705786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 1924152 - 1924099
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1924152 ggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 1924099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 9281518 - 9281465
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9281518 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 9281465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 20892884 - 20892937
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20892884 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 20892937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 23835876 - 23835929
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23835876 ggagaaaacttatgtacaattccttaggtgcttttcgtatggttcttaactaaa 23835929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 24102003 - 24101950
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24102003 ggagaaaacttaagtacaattccttaggtgcttttcgtatggttcttaactaaa 24101950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 34455885 - 34455938
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34455885 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaa 34455938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 43858605 - 43858548
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattca 257  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43858605 ggagaaaatttaggtacaattccttaggtacttttcgtatggttcttaactaaattca 43858548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 3116876 - 3116929
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  3116876 ggagaaaacttaggtacaattcttttggtgcttttcgtatggttcttaactaaa 3116929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 9933740 - 9933687
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  9933740 ggagaaaatttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 9933687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 34490456 - 34490509
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  34490456 ggagaaaacttaggtacaattctttaggtgtttttcgtatggttcttaactaaa 34490509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 45408625 - 45408678
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  45408625 ggagaaaacttaggtacaattccttaggtgttttttgtatggttcttaactaaa 45408678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 205 - 253
Target Start/End: Original strand, 2818671 - 2818719
Alignment:
Q  205 aaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2818671 aaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaa 2818719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 214 - 301
Target Start/End: Original strand, 17500020 - 17500107
Alignment:
Q  214 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||| |||| ||| ||||||||||||||||||||||||||||  | || | ||||||||| | ||||| ||||||||||||||||    
T  17500020 tacaatttcttatgtgtttttcgtatggttcttaactaaattcacggtaatcttctcaaatcctttattttttcaaagtttgttatat 17500107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 12850713 - 12850660
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||| |||||||| || ||||||||||||||||||||||||||    
T  12850713 ggagaaaacttaggtccaattcctcagatgcttttcgtatggttcttaactaaa 12850660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 22269722 - 22269775
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||    
T  22269722 ggagaaaacttaggtacaattccttaggtgtttttcgtatgatttttaactaaa 22269775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 214 - 303
Target Start/End: Original strand, 39242997 - 39243086
Alignment:
Q  214 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    ||||||| |||||||  |||||||||| |||||||||||||| | | ||||||| ||||||  || ||||| ||||||||||||||||||    
T  39242997 tacaatttcttaggtatttttcgtatgattcttaactaaatttatcgtgatttcatcaaatttatgattttatcaaagtttgttatatcc 39243086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 253
Target Start/End: Original strand, 7737065 - 7737117
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||| ||||||||||||| ||||| ||||||||||||    
T  7737065 gagaaaacttaggtacaatttcttaggtgcttttggtatgattcttaactaaa 7737117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 27920573 - 27920625
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  27920573 ggagaaaacttag-tacaatttcttaggtgcttttcgtatgggtcttaactaaa 27920625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 42713949 - 42713896
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||| |||| |||||||||| ||| ||||||||||||    
T  42713949 ggagaaaacttaggtacaatttcttaagtgcttttcgcatgattcttaactaaa 42713896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 8111744 - 8111692
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa 252  Q
    ||||||||||||| ||||||| ||||||| ||||| |||||||||||||||||    
T  8111744 ggagaaaacttagttacaatttcttaggtcctttttgtatggttcttaactaa 8111692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 6605738 - 6605777
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtat 239  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  6605738 ggagaaaacttaggtacaattccttatgtgcttttcgtat 6605777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 273
Target Start/End: Original strand, 17434728 - 17434770
Alignment:
Q  231 ttttcgtatggttcttaactaaattcaccatgatttcctcaaa 273  Q
    ||||||||||||||||||||||||||||||| |||| ||||||    
T  17434728 ttttcgtatggttcttaactaaattcaccataattttctcaaa 17434770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 301
Target Start/End: Complemental strand, 25095898 - 25095801
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcacca-tgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    ||||||||| |||||||||||| ||| ||||| |||  |||||||||||||| |  | ||||||| |||||| | ||||||| ||||||||||||||||    
T  25095898 aaaacttag-tacaattccttacgtgtttttcatataattcttaactaaatttaaaaatgatttcttcaaattcttaattttttcaaagtttgttatat 25095801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 7116374 - 7116423
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||| |||| | |||||||||||||||| |||||||    
T  7116374 aaaacttaggtacaattctttagatacttttcgtatggttctcaactaaa 7116423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 29229534 - 29229482
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||| |||||||| |||| | ||||||||||||||||||||||||    
T  29229534 ggagaaaacttag-tacaattctttagttacttttcgtatggttcttaactaaa 29229482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 29342834 - 29342782
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||| |||||||| |||| | ||||||||||||||||||||||||    
T  29342834 ggagaaaacttag-tacaattctttagttacttttcgtatggttcttaactaaa 29342782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 9850923 - 9850875
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||    ||| |||||||||||||||||||||||    
T  9850923 gagaaaacttaggtacaattcc----gtgtttttcgtatggttcttaactaaa 9850875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 43475946 - 43475997
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||| ||||||||||| ||||| ||||||||||||| | |||||||    
T  43475946 agaaaacttatgtacaattcctcaggtgattttcgtatggttttaaactaaa 43475997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 17434840 - 17434798
Alignment:
Q  212 ggtacaattccttaggtgcttttcgtatggttcttaactaaat 254  Q
    ||||||||||||||| || |||||||||| |||||||||||||    
T  17434840 ggtacaattccttagatgtttttcgtatgattcttaactaaat 17434798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 297
Target Start/End: Complemental strand, 1699946 - 1699853
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 297  Q
    |||||| |||| || || |||| ||| ||||  ||| ||||||||||||||| |  ||||| |||||||| | ||| |||||||||||||||||    
T  1699946 aaaactaaggtgcattttcttaagtgttttttatatagttcttaactaaattaattatgatgtcctcaaaactatatttttctcaaagtttgtt 1699853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 303
Target Start/End: Original strand, 17434755 - 17434783
Alignment:
Q  275 ccataattttctcaaagtttgttatatcc 303  Q
    |||||||||||||||||||||||||||||    
T  17434755 ccataattttctcaaagtttgttatatcc 17434783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 200 - 302
Target Start/End: Complemental strand, 20476602 - 20476500
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  20476602 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaaatttgttat 20476503  T
Q  300 atc 302  Q
    |||    
T  20476502 atc 20476500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 33629345 - 33629448
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  33629345 ggagaaaacttaggtacaattccttatgtgcttttggtatggttcttaactaaattcactatgattttctcaaatccataattttctcaaagtttgttat 33629444  T
Q  300 atcc 303  Q
    ||||    
T  33629445 atcc 33629448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 1138730 - 1138627
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||    
T  1138730 ggagaaaacttaggtacaattccatagctgcttttcgtatggttcttaactaaattcattatgattttctcaaatccataattttctcaaagtttgttat 1138631  T
Q  300 atcc 303  Q
    ||||    
T  1138630 atcc 1138627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 200 - 302
Target Start/End: Complemental strand, 15856014 - 15855912
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  15856014 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttat 15855915  T
Q  300 atc 302  Q
    |||    
T  15855914 atc 15855912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 200 - 302
Target Start/End: Complemental strand, 16473126 - 16473024
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  16473126 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttat 16473027  T
Q  300 atc 302  Q
    |||    
T  16473026 atc 16473024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 35420612 - 35420714
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  35420612 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttat 35420711  T
Q  300 atc 302  Q
    |||    
T  35420712 atc 35420714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 203 - 303
Target Start/End: Complemental strand, 12744994 - 12744894
Alignment:
Q  203 gaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 302  Q
    ||||||||||||||||||||||||||| |||||||||| || || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12744994 gaaaacttaggtacaattccttaggtgtttttcgtatgatttttgactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatc 12744895  T
Q  303 c 303  Q
    |    
T  12744894 c 12744894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 4266153 - 4266050
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||     
T  4266153 ggagaaaacttcggtacaattccttaggtgtttttcgtatggttcttaactaaattcaccgtgatttcttcaaatccataattttcttaaagtttgttac 4266054  T
Q  300 atcc 303  Q
    ||||    
T  4266053 atcc 4266050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 13754291 - 13754393
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||    
T  13754291 ggagaaaacttaggtacaattccttatgtgtttttcgtatgattcttaactaaattcaccataatttcctcaaattcataattttctcaaagtttgctat 13754390  T
Q  300 atc 302  Q
    |||    
T  13754391 atc 13754393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 32623219 - 32623317
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 302  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||||||||||    
T  32623219 aaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaattcactatgatttctgtaaatccataattttctcaaagtttgttatatc 32623317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 203 - 302
Target Start/End: Complemental strand, 12808079 - 12807980
Alignment:
Q  203 gaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 302  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  12808079 gaaaacttaggtacaattccttaagtgtttttcgtatgattcttgactaaattcaccatgatttccttaaatccataattttttcaaagtttgttatatc 12807980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 21259730 - 21259833
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  21259730 ggagaaaacttacgtacaattctttatgtgcttttcgtatggttcttagttaaattcaccatgatttcctcaaaatcataattttctcaaagtttgttat 21259829  T
Q  300 atcc 303  Q
    ||||    
T  21259830 atcc 21259833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 287
Target Start/End: Original strand, 21591213 - 21591300
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctc 287  Q
    |||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  21591213 ggagaaaacttaggtacaattccttaagtgcttttcgtatggttgtgaactaaattcaccatgatttcctcaaatccataattttctc 21591300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 287
Target Start/End: Original strand, 21595330 - 21595417
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctc 287  Q
    |||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  21595330 ggagaaaacttaggtacaattccttaagtgcttttcgtatggttgtgaactaaattcaccatgatttcctcaaatccataattttctc 21595417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 43539278 - 43539175
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||| | |||||| || |||||||||||||||||||||||||||||    
T  43539278 ggagaaaatttaggtacaattccttaggtgtttttcgtatggtccttaactaaattcatcgtgattttcttaaatccataattttctcaaagtttgttat 43539179  T
Q  300 atcc 303  Q
    ||||    
T  43539178 atcc 43539175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 200 - 300
Target Start/End: Original strand, 37552308 - 37552408
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||| ||  |||||||| ||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  37552308 ggagaaaacttaggtacaattcattccgtgctttttgtacggttcttaactaaattcaccatgacttcctcaaattcataattttctcaaagtttgttat 37552407  T
Q  300 a 300  Q
    |    
T  37552408 a 37552408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 214 - 303
Target Start/End: Complemental strand, 21262100 - 21262011
Alignment:
Q  214 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    |||||||||||||  |||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  21262100 tacaattccttagcagctttttgtatggttcttaactaaattcatcatgatttcctcaaatccacaattttctcaaagtttgttatatcc 21262011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 204 - 303
Target Start/End: Complemental strand, 19976429 - 19976330
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    |||| ||||||||||||||||||||||||||||||| ||| || | |||||| |||||||||||||||||||||||||||||||||||||| | ||||||    
T  19976429 aaaatttaggtacaattccttaggtgcttttcgtatagttattgattaaatttaccatgatttcctcaaatccataattttctcaaagtttatcatatcc 19976330  T

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Target: chr5; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 780794 - 780895
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||| ||||||| |||||||||| | |||||||||||  |||| | |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  780794 ggagaaaagttaggtagaattccttagattcttttcgtatgactcttgattaaattcaccatgatttccttaaatccataattttcttaaagtttgttat 780893  T
Q  300 at 301  Q
    ||    
T  780894 at 780895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 1456023 - 1456125
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||| ||||||||||||||  |||||||  |||||||| |||||||||||||  | |||| ||||||||||||||||||||||||||||||||    
T  1456023 ggagaaaactt-ggtacaattccttacctgctttttatatggttcataactaaattcactgtaattttctcaaatccataattttctcaaagtttgttat 1456121  T
Q  300 atcc 303  Q
    ||||    
T  1456122 atcc 1456125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 236 - 303
Target Start/End: Original strand, 24397282 - 24397348
Alignment:
Q  236 gtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24397282 gtatggttcttaactaaattcac-atgatttcctcaaatccataattttctcaaagtttgttatatcc 24397348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 2529140 - 2529066
Alignment:
Q  212 ggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttct 286  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  2529140 ggtacaatttcttaggtgcttttcgtgtggttcttaactaaattcaccgtgatttccttaaatccataattttct 2529066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 300
Target Start/End: Original strand, 37655182 - 37655252
Alignment:
Q  230 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    ||||| ||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  37655182 ctttttgtacggttcttaactaaattcaccatgacttcctcaaattcataattttctcaaagtttgttata 37655252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 24397415 - 24397364
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24397415 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 24397364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 273
Target Start/End: Complemental strand, 2268776 - 2268703
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaa 273  Q
    |||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||  |||||||||||||    
T  2268776 ggagaaaacttaggtataatttcttagatgctttttgtatggttcttaactaaattcactgtgatttcctcaaa 2268703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 15855843 - 15855896
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15855843 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 15855896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 35420783 - 35420730
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35420783 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 35420730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 1138559 - 1138612
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  1138559 ggagaaaacttaggtacaattcttttggtgcttttcgtatggttcttaactaaa 1138612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 4265982 - 4266035
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  4265982 ggagaaaacttaggtacaatttcttaggtgtttttcgtatggttcttaactaaa 4266035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 253
Target Start/End: Complemental strand, 8364797 - 8364748
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8364797 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 8364748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 16472959 - 16473008
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16472959 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 16473008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 204 - 301
Target Start/End: Complemental strand, 35807102 - 35807005
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    |||| ||||||| |||| ||||| || |||| |||||||||| | |||||||||||||||||| ||||||||  ||||||| | ||||||||||||||    
T  35807102 aaaatttaggtaaaatttcttagatgatttttgtatggttctaacctaaattcaccatgattttctcaaatctttaatttttttaaagtttgttatat 35807005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 303
Target Start/End: Complemental strand, 18236608 - 18236536
Alignment:
Q  231 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    ||||||||||||||||||||||||||  | |||||| || |||| ||||||||| ||||||||||||||||||    
T  18236608 ttttcgtatggttcttaactaaattcgtcgtgattttcttaaatacataattttttcaaagtttgttatatcc 18236536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 2255631 - 2255580
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  2255631 agaaaacttaggtacaattctttaggtgcttttcgtgtggttcttaactaaa 2255580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 302
Target Start/End: Original strand, 35276295 - 35276394
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttc-gtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 302  Q
    ||||||||| ||||||  |||||||| ||||  ||||||||  |||||||||| ||||||||||  |||||||||||||||||| ||||||| |||||||    
T  35276295 aaaacttagttacaataacttaggtgtttttttgtatggtttataactaaatttaccatgattttatcaaatccataattttcttaaagtttattatatc 35276394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 10132421 - 10132359
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattt 266  Q
    ||||||||| |||||||||||| ||| |||| ||||||||||||||||||||||||| |||||    
T  10132421 aaaacttagatacaattccttatgtgttttttgtatggttcttaactaaattcaccacgattt 10132359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 1164967 - 1164914
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||| ||||    
T  1164967 ggagaaaatttaggtacaattccttagctgcttttcgtatggttcttaattaaa 1164914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 299
Target Start/End: Original strand, 8364668 - 8364729
Alignment:
Q  238 atggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||| || ||||  |||||| ||||||||||||||||    
T  8364668 atggttcttaactaaattcaccatgattttcttaaatttataattctctcaaagtttgttat 8364729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 20476431 - 20476484
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||||||||    
T  20476431 ggagaaaacttaggtacaattctctagatgcttttcgtatggttcttaactaaa 20476484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 21259901 - 21259848
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  21259901 ggagaaaatttaggtacaattccttaggtacttttcttatggttcttaactaaa 21259848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 780959 - 780915
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 248  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  780959 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaa 780915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 293
Target Start/End: Original strand, 1384331 - 1384421
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtt 293  Q
    |||||| ||||||| |||| |||||||| || || ||| ||| ||||||||||| |  |||||||||||||||| |||||||||||||||||    
T  1384331 agaaaatttaggtaaaatttcttaggtg-ttatcatatagtttttaactaaatttattatgatttcctcaaatctataattttctcaaagtt 1384421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 17583410 - 17583367
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggtt 243  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  17583410 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggtt 17583367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 4913316 - 4913258
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg 262  Q
    |||||||| |||||||| |||||||| |||| |||||||||||||||||||||| ||||    
T  4913316 aaaacttacgtacaatttcttaggtgttttttgtatggttcttaactaaattcatcatg 4913258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 5144576 - 5144495
Alignment:
Q  222 cttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    |||||||| ||||| |||| || ||||||||||||| ||||||||| | |||| |||||||||||| ||| || ||||||||    
T  5144576 cttaggtgtttttcctatgatttttaactaaattcatcatgatttctttaaattcataattttctctaaggttattatatcc 5144495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 13754462 - 13754409
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| ||| |||||||| |||||||| |||||||||||||||||||||||    
T  13754462 ggagaaaatttatgtacaattacttaggtgtttttcgtatggttcttaactaaa 13754409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 252
Target Start/End: Complemental strand, 25751619 - 25751570
Alignment:
Q  203 gaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa 252  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  25751619 gaaaacttaggtacaattttttaggtgcttttcgtgtggttcttaactaa 25751570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 33629518 - 33629465
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| |||||||||||||||||| || |||||||||| ||||||||||||    
T  33629518 ggagaaaatttaggtacaattccttagatgtttttcgtatgattcttaactaaa 33629465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 248
Target Start/End: Original strand, 29141805 - 29141853
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 248  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  29141805 ggagaaaacttagatacaattgcttaggtgtttttcgtatggttcttaa 29141853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 253
Target Start/End: Original strand, 20464014 - 20464052
Alignment:
Q  215 acaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  20464014 acaattccttaggtgctttttgtatggttcttaactaaa 20464052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 284
Target Start/End: Complemental strand, 28056245 - 28056179
Alignment:
Q  218 attccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataatttt 284  Q
    ||||||| |||  |||| |||||||||||||||||||| | |||||||| || ||||||||||||||    
T  28056245 attcctttggtattttttgtatggttcttaactaaatttatcatgattttcttaaatccataatttt 28056179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 2268172 - 2268225
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| ||||||||||||||||| ||| |||| ||||||||||||| ||||    
T  2268172 ggagaaaaattaggtacaattccttaagtgttttttgtatggttcttaattaaa 2268225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 35806939 - 35806988
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||| ||| ||||||||| ||||||||||||| |||||||||||||||||    
T  35806939 aaaatttaagtacaattctttaggtgcttttcatatggttcttaactaaa 35806988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 29141907 - 29141863
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 248  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||    
T  29141907 aaaaattaggtacaactccataggtgcttttcgtatggttcttaa 29141863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 262 - 301
Target Start/End: Complemental strand, 735385 - 735346
Alignment:
Q  262 gatttcctcaaatccataattttctcaaagtttgttatat 301  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  735385 gatttcatcaaattcataattttctcaaagtttgttatat 735346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Original strand, 34513477 - 34513515
Alignment:
Q  259 catgatttcctcaaatccataattttctcaaagtttgtt 297  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  34513477 catgatttcttcaaacccataattttctcaaagtttgtt 34513515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 12807912 - 12807964
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||  ||||||| |||||||| ||||||||||||| |||||||||    
T  12807912 ggagaaaacttaa-tacaatttcttaggtgtttttcgtatggtttttaactaaa 12807964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 18236470 - 18236519
Alignment:
Q  204 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||| ||||| |||||||| |||| |||||| |||||    
T  18236470 aaaacttaggtacaatttcttagctgcttttcctatgattcttagctaaa 18236519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 260 - 300
Target Start/End: Complemental strand, 2538507 - 2538467
Alignment:
Q  260 atgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    |||||||  |||||||||||||||||||| |||||||||||    
T  2538507 atgattttttcaaatccataattttctcagagtttgttata 2538467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 10499979 - 10499947
Alignment:
Q  220 tccttaggtgcttttcgtatggttcttaactaa 252  Q
    |||||||||| ||||||||||||||||||||||    
T  10499979 tccttaggtgtttttcgtatggttcttaactaa 10499947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 287
Target Start/End: Complemental strand, 10500217 - 10500161
Alignment:
Q  231 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctc 287  Q
    |||||||||| |||||||||||||   || |||||||||||||| |||||| |||||    
T  10500217 ttttcgtatgattcttaactaaataatccttgatttcctcaaatacataatgttctc 10500161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 268 - 300
Target Start/End: Original strand, 12257582 - 12257614
Alignment:
Q  268 ctcaaatccataattttctcaaagtttgttata 300  Q
    ||||||||||||||||| |||||||||||||||    
T  12257582 ctcaaatccataattttttcaaagtttgttata 12257614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 7257 - 7154
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7257 ggagaaaatttaggtacgattccttaggtgcttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgttat 7158  T
Q  300 atcc 303  Q
    ||||    
T  7157 atcc 7154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 7086 - 7139
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  7086 ggagaaaatttaggtacaattccttaggtgtttttcgtatgattcttaactaaa 7139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 201 - 303
Target Start/End: Complemental strand, 48296 - 48194
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    |||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  48296 gagaaaacttagatacaattccttagatgcttttcgtatagttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttata 48197  T
Q  301 tcc 303  Q
    |||    
T  48196 tcc 48194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 84; Significance: 6e-40; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 51234 - 51131
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  51234 ggagaaaacttaggtacaattccttaggtacttttcatatggttcttaactaaattcactatgatttccttaaattcataattttctcaaagtttgttat 51135  T
Q  300 atcc 303  Q
    ||||    
T  51134 atcc 51131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 51063 - 51116
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  51063 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 51116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 200 - 302
Target Start/End: Original strand, 1939 - 2041
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||| ||||||| ||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1939 ggagaaaatttaggtataattgtttaggtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgttat 2038  T
Q  300 atc 302  Q
    |||    
T  2039 atc 2041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 2112 - 2058
Alignment:
Q  199 cggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  2112 cggagaaaacttaggtacaattccttaggtgctttttatatggttcttaactaaa 2058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 200 - 303
Target Start/End: Original strand, 3393 - 3496
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||||||||||||||||| || ||||||||| ||||||||||||| |||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  3393 ggagaaaacttaggtacaattcatttggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaatttataattttatcaaagtttgttat 3492  T
Q  300 atcc 303  Q
    ||||    
T  3493 atcc 3496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 3564 - 3511
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||||||| ||||    
T  3564 ggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaa 3511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 201 - 303
Target Start/End: Complemental strand, 14612 - 14510
Alignment:
Q  201 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 300  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | ||| ||| |||||||||||||||||||| |||||||    
T  14612 gagaaaacttaggtacaattccttgggtgcttttcgtatcgttcttaactaaattcaccattacttcgtcatatccataattttctcaaagtctgttata 14513  T
Q  301 tcc 303  Q
    |||    
T  14512 tcc 14510  T

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Target: scaffold0118; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 14442 - 14495
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||||||||||| |||||||| ||||| |||||| ||||||||||    
T  14442 ggagaaaacttaggtacaatttcttaggtgtttttcctatggtacttaactaaa 14495  T

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Target: scaffold0137 (Bit Score: 72; Significance: 9e-33; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 303
Target Start/End: Complemental strand, 10286 - 10183
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 299  Q
    |||||||| |||||||||||| |||| |||||||||||||  ||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  10286 ggagaaaatttaggtacaatttcttatgtgcttttcgtataattcttaagtaaattcaccatgattttctcacatccataattttctcaaagtttgttat 10187  T
Q  300 atcc 303  Q
    ||||    
T  10186 atcc 10183  T

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Target: scaffold0137; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 10118 - 10169
Alignment:
Q  202 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  10118 agaaaacttaggtataattccttaggtgttttgcgtatggttcttaactaaa 10169  T

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Target: scaffold0595 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 200 - 279
Target Start/End: Complemental strand, 5878 - 5797
Alignment:
Q  200 ggagaaaacttaggtacaatt--ccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccata 279  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5878 ggagaaaacttaggtacaattttccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccata 5797  T

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Target: scaffold0595; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 5701 - 5754
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  5701 ggagaaaactaaggtacaattctttaggtgcttttcgtatggttcttaactaaa 5754  T

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Target: scaffold0018 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 210 - 303
Target Start/End: Original strand, 138287 - 138380
Alignment:
Q  210 taggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||| |||||||| || ||||||||| |||| | ||||||| ||||||||    
T  138287 taggtacaattccttaggagcttttcgtatgattcttaactaaattcatcatgattttcttaaatccatattttttttaaagtttattatatcc 138380  T

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Target: scaffold0013 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 94306 - 94240
Alignment:
Q  237 tatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 303  Q
    ||||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||||||||||||    
T  94306 tatggttcttaactaaattcaccatgattttatcaaatccaaaattttctcatagtttgttatatcc 94240  T

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Target: scaffold0069 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 26405 - 26458
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26405 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttattaactaaa 26458  T

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Target: scaffold0069; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 229
Target Start/End: Complemental strand, 26492 - 26463
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtg 229  Q
    ||||||||||||||||||||||||||||||    
T  26492 ggagaaaacttaggtacaattccttaggtg 26463  T

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Target: scaffold0006 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 72288 - 72359
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctca 271  Q
    ||||| ||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||| |||| ||||    
T  72288 ggagagaacttaggtacaattccttagatgctttttgtatgattcttagctaaattcaccataattttctca 72359  T

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Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 72441 - 72389
Alignment:
Q  200 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 253  Q
    ||||||||||||| | |||||||||| ||||||||||||||||| |||||||||    
T  72441 ggagaaaacttag-tgcaattccttaagtgcttttcgtatggtttttaactaaa 72389  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 269
Target Start/End: Original strand, 90738 - 90770
Alignment:
Q  237 tatggttcttaactaaattcaccatgatttcct 269  Q
    ||||||||||||||||||| |||||||||||||    
T  90738 tatggttcttaactaaatttaccatgatttcct 90770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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