View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19234_low_12 (Length: 245)

Name: NF19234_low_12
Description: NF19234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19234_low_12
NF19234_low_12
[»] chr3 (59 HSPs)
chr3 (1-159)||(15514337-15514495)
chr3 (1-107)||(5504974-5505084)
chr3 (20-116)||(10435184-10435280)
chr3 (34-116)||(4238749-4238831)
chr3 (19-120)||(9281307-9281408)
chr3 (35-116)||(39435165-39435246)
chr3 (20-116)||(32951251-32951347)
chr3 (20-116)||(3547536-3547631)
chr3 (20-116)||(17052914-17053010)
chr3 (19-107)||(50029287-50029375)
chr3 (19-93)||(4016579-4016653)
chr3 (40-150)||(9794310-9794420)
chr3 (1-70)||(18971448-18971518)
chr3 (39-117)||(46764009-46764086)
chr3 (20-93)||(5852530-5852603)
chr3 (20-117)||(7671428-7671525)
chr3 (20-142)||(35135829-35135946)
chr3 (39-116)||(35764844-35764920)
chr3 (20-116)||(53066424-53066520)
chr3 (20-107)||(3648161-3648248)
chr3 (19-70)||(39557477-39557528)
chr3 (20-107)||(48690113-48690199)
chr3 (36-93)||(9211138-9211195)
chr3 (40-117)||(9776634-9776711)
chr3 (20-93)||(21797672-21797745)
chr3 (25-93)||(10228600-10228668)
chr3 (5-104)||(20548996-20549096)
chr3 (25-93)||(29588495-29588563)
chr3 (1-126)||(33462797-33462926)
chr3 (1-93)||(43394430-43394525)
chr3 (20-91)||(6910450-6910521)
chr3 (26-93)||(19824017-19824084)
chr3 (20-114)||(39099078-39099173)
chr3 (20-79)||(40415037-40415096)
chr3 (34-93)||(44821405-44821464)
chr3 (20-70)||(13499431-13499481)
chr3 (20-70)||(20765312-20765362)
chr3 (20-70)||(21005409-21005459)
chr3 (20-70)||(27010570-27010620)
chr3 (20-70)||(27334827-27334877)
chr3 (20-70)||(30213920-30213970)
chr3 (20-70)||(33415915-33415965)
chr3 (28-121)||(36594261-36594355)
chr3 (1-82)||(37166574-37166656)
chr3 (20-70)||(39866237-39866287)
chr3 (20-70)||(42490292-42490342)
chr3 (43-93)||(43370429-43370479)
chr3 (20-126)||(43467782-43467888)
chr3 (34-116)||(49057906-49057988)
chr3 (1-81)||(935123-935204)
chr3 (41-122)||(1334140-1334221)
chr3 (20-93)||(32220949-32221022)
chr3 (1-136)||(41747821-41747955)
chr3 (25-93)||(12948160-12948228)
chr3 (41-93)||(18013341-18013393)
chr3 (21-93)||(29720511-29720583)
chr3 (20-116)||(32285291-32285387)
chr3 (41-93)||(36179007-36179059)
chr3 (20-116)||(36665069-36665164)
[»] chr5 (54 HSPs)
chr5 (1-150)||(32300586-32300736)
chr5 (20-122)||(21961271-21961373)
chr5 (1-110)||(35641861-35641974)
chr5 (20-116)||(970188-970284)
chr5 (20-116)||(4299948-4300043)
chr5 (20-116)||(39405814-39405910)
chr5 (34-116)||(22613838-22613920)
chr5 (20-116)||(43067279-43067375)
chr5 (20-93)||(2864027-2864100)
chr5 (41-150)||(36578722-36578831)
chr5 (20-115)||(15268161-15268257)
chr5 (34-94)||(17407394-17407454)
chr5 (20-116)||(32002129-32002225)
chr5 (26-121)||(30788326-30788421)
chr5 (20-107)||(32381978-32382065)
chr5 (39-116)||(25773110-25773190)
chr5 (20-122)||(29627312-29627414)
chr5 (20-70)||(35290817-35290867)
chr5 (25-122)||(1918677-1918774)
chr5 (20-116)||(19889704-19889799)
chr5 (25-93)||(26801977-26802045)
chr5 (25-93)||(26809527-26809595)
chr5 (25-93)||(34112078-34112146)
chr5 (20-116)||(37843690-37843786)
chr5 (20-116)||(16048133-16048231)
chr5 (34-93)||(27674346-27674405)
chr5 (20-70)||(978193-978243)
chr5 (20-70)||(1830751-1830801)
chr5 (17-107)||(3135476-3135566)
chr5 (20-82)||(5985054-5985116)
chr5 (20-70)||(9050672-9050722)
chr5 (20-70)||(9502723-9502773)
chr5 (20-70)||(14634253-14634303)
chr5 (19-93)||(24520281-24520355)
chr5 (25-119)||(27579477-27579571)
chr5 (20-70)||(30779861-30779911)
chr5 (20-70)||(33387336-33387386)
chr5 (39-93)||(34347605-34347659)
chr5 (20-70)||(40316218-40316268)
chr5 (20-70)||(41411272-41411322)
chr5 (19-93)||(41625214-41625288)
chr5 (20-93)||(898374-898447)
chr5 (20-93)||(3472350-3472423)
chr5 (20-93)||(6996096-6996169)
chr5 (20-93)||(12359895-12359967)
chr5 (20-93)||(27109804-27109877)
chr5 (20-93)||(33587542-33587615)
chr5 (20-93)||(40156314-40156387)
chr5 (25-93)||(3422283-3422351)
chr5 (25-93)||(14355619-14355687)
chr5 (41-93)||(14639591-14639643)
chr5 (74-110)||(25946264-25946300)
chr5 (25-93)||(26824554-26824622)
chr5 (41-93)||(32110518-32110570)
[»] chr7 (71 HSPs)
chr7 (1-122)||(4033335-4033457)
chr7 (1-107)||(9821148-9821255)
chr7 (1-107)||(10723073-10723180)
chr7 (1-94)||(3680440-3680534)
chr7 (1-117)||(40348459-40348576)
chr7 (20-111)||(26203177-26203268)
chr7 (20-122)||(38198525-38198627)
chr7 (1-124)||(29255334-29255456)
chr7 (20-116)||(36643212-36643308)
chr7 (20-116)||(35500862-35500958)
chr7 (34-116)||(10464244-10464326)
chr7 (20-117)||(23474084-23474181)
chr7 (7-94)||(47841172-47841260)
chr7 (39-150)||(23348490-23348600)
chr7 (20-82)||(27248732-27248794)
chr7 (34-116)||(34478140-34478222)
chr7 (24-93)||(33010316-33010385)
chr7 (20-116)||(37231678-37231775)
chr7 (20-116)||(21392068-21392164)
chr7 (25-93)||(35570122-35570190)
chr7 (20-115)||(18795255-18795350)
chr7 (20-91)||(32431433-32431504)
chr7 (1-93)||(19817427-19817523)
chr7 (20-114)||(29770589-29770683)
chr7 (20-86)||(46657713-46657779)
chr7 (19-73)||(48516289-48516343)
chr7 (20-93)||(20885219-20885292)
chr7 (20-93)||(21379860-21379933)
chr7 (1-107)||(41796715-41796825)
chr7 (1-116)||(47080709-47080828)
chr7 (20-117)||(48531371-48531468)
chr7 (20-76)||(7336721-7336777)
chr7 (25-93)||(23707496-23707564)
chr7 (1-116)||(28185503-28185619)
chr7 (25-69)||(30342195-30342239)
chr7 (25-93)||(46321225-46321293)
chr7 (25-115)||(32337618-32337708)
chr7 (83-150)||(42493808-42493875)
chr7 (19-93)||(5309182-5309256)
chr7 (20-70)||(5788473-5788523)
chr7 (21-79)||(7312988-7313046)
chr7 (20-94)||(14201449-14201523)
chr7 (20-70)||(28061611-28061661)
chr7 (20-122)||(32619057-32619159)
chr7 (1-70)||(33613312-33613382)
chr7 (20-70)||(36623424-36623474)
chr7 (20-70)||(38851943-38851993)
chr7 (20-70)||(39130022-39130072)
chr7 (20-70)||(42890439-42890489)
chr7 (20-70)||(44389401-44389451)
chr7 (20-70)||(44732128-44732178)
chr7 (20-70)||(45332033-45332083)
chr7 (20-70)||(47156143-47156193)
chr7 (20-70)||(48602552-48602602)
chr7 (25-79)||(48796290-48796344)
chr7 (20-93)||(2198718-2198791)
chr7 (20-93)||(7439019-7439092)
chr7 (21-70)||(7460955-7461004)
chr7 (20-93)||(16778621-16778694)
chr7 (25-70)||(26161720-26161765)
chr7 (22-111)||(40035420-40035509)
chr7 (20-93)||(40256173-40256245)
chr7 (20-93)||(41134561-41134634)
chr7 (25-93)||(5529132-5529200)
chr7 (41-121)||(9173184-9173264)
chr7 (34-122)||(31110666-31110754)
chr7 (25-93)||(33376895-33376962)
chr7 (25-93)||(38850822-38850890)
chr7 (41-93)||(40818573-40818625)
chr7 (26-70)||(41898110-41898154)
chr7 (41-93)||(48448654-48448706)
[»] scaffold0687 (1 HSPs)
scaffold0687 (1-122)||(1081-1203)
[»] chr8 (54 HSPs)
chr8 (1-122)||(7603399-7603521)
chr8 (25-122)||(148147-148243)
chr8 (20-116)||(42785948-42786044)
chr8 (19-122)||(42948366-42948469)
chr8 (20-94)||(26628017-26628091)
chr8 (21-94)||(7044194-7044266)
chr8 (20-117)||(20671531-20671628)
chr8 (20-116)||(31127920-31128016)
chr8 (28-92)||(37434660-37434723)
chr8 (1-117)||(12893580-12893697)
chr8 (20-116)||(18809326-18809422)
chr8 (20-111)||(10536886-10536976)
chr8 (20-93)||(1226619-1226691)
chr8 (20-117)||(6470894-6470991)
chr8 (20-93)||(23849730-23849803)
chr8 (20-120)||(22489320-22489419)
chr8 (20-70)||(13216817-13216867)
chr8 (20-86)||(20671371-20671437)
chr8 (20-93)||(132133-132206)
chr8 (20-93)||(616899-616972)
chr8 (20-117)||(1580880-1580977)
chr8 (20-93)||(14237396-14237469)
chr8 (36-105)||(35584035-35584104)
chr8 (20-93)||(41263926-41263999)
chr8 (20-93)||(42587321-42587394)
chr8 (25-93)||(8496759-8496827)
chr8 (20-116)||(25256384-25256479)
chr8 (3-70)||(45253845-45253913)
chr8 (19-70)||(24524202-24524253)
chr8 (20-70)||(623292-623342)
chr8 (20-70)||(2766144-2766194)
chr8 (39-116)||(11854574-11854652)
chr8 (20-70)||(18044541-18044591)
chr8 (20-70)||(20167692-20167742)
chr8 (20-70)||(36641954-36642004)
chr8 (35-93)||(36919753-36919811)
chr8 (20-70)||(40494500-40494550)
chr8 (39-117)||(44123722-44123800)
chr8 (25-79)||(44717415-44717469)
chr8 (20-93)||(8394462-8394535)
chr8 (20-117)||(14522429-14522526)
chr8 (21-82)||(16345293-16345354)
chr8 (20-93)||(18020985-18021058)
chr8 (20-117)||(23248826-23248923)
chr8 (20-93)||(36167824-36167897)
chr8 (20-93)||(38957286-38957359)
chr8 (81-125)||(2732758-2732802)
chr8 (20-92)||(3370330-3370402)
chr8 (35-115)||(3383461-3383540)
chr8 (41-93)||(5777427-5777479)
chr8 (30-82)||(13888514-13888566)
chr8 (41-93)||(27301998-27302050)
chr8 (41-93)||(29917801-29917853)
chr8 (25-93)||(44887588-44887656)
[»] chr6 (32 HSPs)
chr6 (1-110)||(17417580-17417690)
chr6 (1-94)||(12869296-12869390)
chr6 (34-116)||(24693267-24693349)
chr6 (40-92)||(16691716-16691768)
chr6 (24-94)||(18998559-18998629)
chr6 (20-93)||(26210862-26210935)
chr6 (20-116)||(25163214-25163310)
chr6 (20-93)||(12226091-12226164)
chr6 (59-116)||(16434682-16434739)
chr6 (20-93)||(22054888-22054961)
chr6 (25-93)||(21540702-21540770)
chr6 (20-116)||(33121592-33121688)
chr6 (19-93)||(18877219-18877293)
chr6 (19-88)||(10599691-10599760)
chr6 (20-93)||(15383003-15383076)
chr6 (20-93)||(17257724-17257797)
chr6 (20-93)||(18668761-18668834)
chr6 (20-93)||(20226371-20226444)
chr6 (20-93)||(22120355-22120428)
chr6 (20-93)||(24955469-24955542)
chr6 (20-116)||(13207068-13207164)
chr6 (20-70)||(6563342-6563392)
chr6 (20-70)||(19088054-19088104)
chr6 (19-93)||(31869851-31869925)
chr6 (20-70)||(32414775-32414825)
chr6 (20-70)||(32671932-32671982)
chr6 (20-93)||(10520584-10520657)
chr6 (20-93)||(16192955-16193028)
chr6 (20-93)||(25475886-25475959)
chr6 (25-93)||(2913017-2913085)
chr6 (25-93)||(10105931-10105999)
chr6 (41-93)||(10109291-10109343)
[»] chr4 (61 HSPs)
chr4 (1-114)||(41790396-41790508)
chr4 (20-116)||(10181038-10181134)
chr4 (1-94)||(10304857-10304951)
chr4 (36-116)||(32154736-32154816)
chr4 (17-107)||(5390335-5390425)
chr4 (20-94)||(39195605-39195679)
chr4 (1-115)||(9965498-9965613)
chr4 (20-115)||(27976685-27976780)
chr4 (20-117)||(39193961-39194058)
chr4 (20-116)||(6234893-6234988)
chr4 (20-116)||(19170654-19170750)
chr4 (20-116)||(19631358-19631454)
chr4 (20-115)||(31486337-31486433)
chr4 (20-116)||(42187094-42187190)
chr4 (26-110)||(53816451-53816534)
chr4 (20-116)||(55190829-55190925)
chr4 (1-70)||(55291164-55291234)
chr4 (20-93)||(19433431-19433504)
chr4 (20-89)||(20651525-20651594)
chr4 (20-116)||(19525829-19525925)
chr4 (20-116)||(25644409-25644505)
chr4 (1-111)||(25678369-25678481)
chr4 (20-124)||(49768487-49768591)
chr4 (34-93)||(42862168-42862227)
chr4 (1-115)||(55014313-55014428)
chr4 (25-143)||(1615659-1615777)
chr4 (20-122)||(6494632-6494734)
chr4 (25-79)||(29424766-29424820)
chr4 (1-122)||(53568398-53568520)
chr4 (20-117)||(7738934-7739031)
chr4 (1-89)||(13203216-13203304)
chr4 (20-93)||(35686523-35686596)
chr4 (20-117)||(39786472-39786568)
chr4 (20-93)||(45064382-45064455)
chr4 (39-116)||(50033070-50033147)
chr4 (20-120)||(29830459-29830559)
chr4 (25-121)||(47833991-47834087)
chr4 (41-93)||(52818565-52818617)
chr4 (1-116)||(55997164-55997280)
chr4 (26-93)||(17610402-17610469)
chr4 (38-93)||(23360306-23360361)
chr4 (19-69)||(19731280-19731330)
chr4 (20-70)||(25296676-25296726)
chr4 (20-70)||(26125824-26125874)
chr4 (20-70)||(26170102-26170152)
chr4 (20-70)||(26659935-26659985)
chr4 (20-122)||(32423194-32423294)
chr4 (20-70)||(43967839-43967889)
chr4 (20-70)||(44232173-44232223)
chr4 (20-70)||(45291948-45291998)
chr4 (39-117)||(50035588-50035666)
chr4 (20-70)||(55209670-55209720)
chr4 (20-93)||(9029522-9029595)
chr4 (20-93)||(17492782-17492855)
chr4 (20-89)||(19533900-19533969)
chr4 (20-93)||(27982663-27982736)
chr4 (20-93)||(31010330-31010403)
chr4 (20-93)||(47386359-47386432)
chr4 (25-93)||(6520555-6520623)
chr4 (41-93)||(8525291-8525343)
chr4 (41-93)||(29821186-29821238)
[»] chr1 (66 HSPs)
chr1 (21-115)||(37515388-37515482)
chr1 (20-117)||(23330501-23330598)
chr1 (1-116)||(38681226-38681343)
chr1 (1-116)||(26441687-26441803)
chr1 (20-115)||(23435679-23435774)
chr1 (1-94)||(32968205-32968299)
chr1 (1-107)||(30005673-30005783)
chr1 (20-94)||(22328034-22328108)
chr1 (20-116)||(3898686-3898782)
chr1 (20-116)||(16265083-16265179)
chr1 (1-115)||(50295794-50295912)
chr1 (19-116)||(33034125-33034226)
chr1 (1-117)||(3088891-3089008)
chr1 (20-104)||(51924838-51924923)
chr1 (20-116)||(24982401-24982497)
chr1 (1-116)||(32495097-32495213)
chr1 (19-94)||(52163529-52163605)
chr1 (34-116)||(16266212-16266294)
chr1 (39-117)||(43590966-43591043)
chr1 (34-122)||(31698716-31698805)
chr1 (20-116)||(43680119-43680216)
chr1 (20-89)||(43729813-43729882)
chr1 (34-118)||(19711740-19711824)
chr1 (1-89)||(26345288-26345379)
chr1 (41-117)||(38737514-38737590)
chr1 (39-93)||(9202160-9202215)
chr1 (1-117)||(5111041-5111158)
chr1 (39-109)||(31427404-31427474)
chr1 (25-126)||(3138712-3138813)
chr1 (20-93)||(9342718-9342791)
chr1 (1-82)||(3910835-3910920)
chr1 (40-92)||(4055276-4055328)
chr1 (25-93)||(16887939-16888007)
chr1 (20-122)||(23391301-23391405)
chr1 (20-116)||(23569789-23569885)
chr1 (20-116)||(27580926-27581022)
chr1 (20-116)||(31971502-31971598)
chr1 (20-116)||(38738093-38738189)
chr1 (25-93)||(42367369-42367437)
chr1 (34-122)||(45265281-45265369)
chr1 (20-116)||(50481328-50481422)
chr1 (19-70)||(6766484-6766535)
chr1 (20-70)||(6402506-6402556)
chr1 (20-70)||(11641163-11641213)
chr1 (20-70)||(17306070-17306120)
chr1 (20-70)||(24321377-24321427)
chr1 (20-70)||(30701834-30701884)
chr1 (20-70)||(36399214-36399264)
chr1 (20-70)||(36757582-36757632)
chr1 (25-79)||(40058861-40058915)
chr1 (20-70)||(40771868-40771918)
chr1 (19-69)||(42735262-42735312)
chr1 (20-70)||(52024142-52024192)
chr1 (23-116)||(16751571-16751664)
chr1 (25-70)||(27292761-27292806)
chr1 (20-93)||(31049723-31049796)
chr1 (1-54)||(42915253-42915306)
chr1 (34-86)||(2126784-2126836)
chr1 (39-107)||(3277546-3277613)
chr1 (41-93)||(5117314-5117366)
chr1 (41-93)||(8250723-8250775)
chr1 (20-116)||(14075785-14075880)
chr1 (25-93)||(31651781-31651849)
chr1 (41-93)||(38786826-38786878)
chr1 (41-93)||(44963552-44963604)
chr1 (25-93)||(49903566-49903633)
[»] chr2 (49 HSPs)
chr2 (19-117)||(19192772-19192870)
chr2 (1-94)||(5030376-5030469)
chr2 (19-125)||(32775795-32775900)
chr2 (1-92)||(34883183-34883278)
chr2 (1-92)||(22701009-22701101)
chr2 (1-94)||(37806874-37806970)
chr2 (20-89)||(41465193-41465262)
chr2 (1-94)||(27668050-27668147)
chr2 (20-116)||(39418135-39418231)
chr2 (20-116)||(44283394-44283490)
chr2 (20-115)||(4045901-4045996)
chr2 (19-93)||(2183033-2183107)
chr2 (20-122)||(4083251-4083353)
chr2 (20-105)||(22896959-22897043)
chr2 (19-116)||(32776014-32776111)
chr2 (20-116)||(40598178-40598275)
chr2 (20-93)||(44365273-44365346)
chr2 (1-107)||(23873135-23873243)
chr2 (20-116)||(41463632-41463728)
chr2 (1-95)||(39997055-39997150)
chr2 (20-122)||(18718283-18718385)
chr2 (20-94)||(23886762-23886836)
chr2 (26-120)||(33607494-33607588)
chr2 (19-120)||(6223181-6223282)
chr2 (20-93)||(36719397-36719470)
chr2 (17-93)||(13398873-13398948)
chr2 (22-116)||(16180284-16180377)
chr2 (25-93)||(18504592-18504660)
chr2 (1-111)||(25277793-25277904)
chr2 (20-76)||(33228532-33228588)
chr2 (20-116)||(38963569-38963665)
chr2 (20-115)||(9877198-9877293)
chr2 (39-117)||(21271841-21271919)
chr2 (20-79)||(38934920-38934978)
chr2 (1-70)||(332373-332443)
chr2 (20-70)||(5405112-5405162)
chr2 (20-70)||(7608165-7608215)
chr2 (20-70)||(8042118-8042168)
chr2 (20-70)||(13125241-13125291)
chr2 (20-70)||(19141162-19141212)
chr2 (35-93)||(32887037-32887095)
chr2 (20-93)||(7799963-7800036)
chr2 (20-93)||(9172219-9172292)
chr2 (20-93)||(22839000-22839073)
chr2 (41-93)||(8924614-8924666)
chr2 (22-82)||(25766561-25766621)
chr2 (41-93)||(26436562-26436614)
chr2 (41-93)||(38963931-38963983)
chr2 (41-93)||(45036499-45036551)
[»] scaffold0018 (1 HSPs)
scaffold0018 (20-94)||(145682-145756)
[»] scaffold0111 (1 HSPs)
scaffold0111 (22-116)||(38477-38571)
[»] scaffold0294 (1 HSPs)
scaffold0294 (42-116)||(12583-12657)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-115)||(45219-45336)
[»] scaffold0002 (1 HSPs)
scaffold0002 (34-105)||(391991-392065)
[»] scaffold0028 (1 HSPs)
scaffold0028 (25-87)||(25219-25281)
[»] scaffold0027 (1 HSPs)
scaffold0027 (20-122)||(117365-117467)
[»] scaffold0024 (2 HSPs)
scaffold0024 (40-93)||(36393-36446)
scaffold0024 (22-139)||(48995-49111)
[»] scaffold0022 (1 HSPs)
scaffold0022 (20-93)||(100720-100793)
[»] scaffold0196 (1 HSPs)
scaffold0196 (17-93)||(26342-26416)
[»] scaffold0195 (1 HSPs)
scaffold0195 (25-93)||(121-189)
[»] scaffold0007 (1 HSPs)
scaffold0007 (39-94)||(2230-2286)


Alignment Details
Target: chr3 (Bit Score: 127; Significance: 1e-65; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 15514495 - 15514337
Alignment:
Q  1 ataaataatattatataaatgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatataga 100  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15514495 ataaataatattatataaatgttggatttgtcacgatgaatgttttcaaaatattaaattttcataatttattctaatagataattaaagataatataga 15514396  T
Q  101 taaaaaatatgcattgacatgtataagagagttaattgtgtcatttaatacgaaaccga 159  Q
    |||||||||| ||||||||||| |||||||||||| ||||||| |||||| ||||||||    
T  15514395 taaaaaatatacattgacatgtgtaagagagttaactgtgtcacttaataggaaaccga 15514337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5504974 - 5505084
Alignment:
Q  1 ataaataatattatataaa----tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataata 96  Q
    ||||||||||| |||||||    ||||||||| ||| |||| ||||| |||||||||||||||||||||||||| | |||||||| ||||||||||| ||    
T  5504974 ataaataatatcatataaaatattgttggattcgtctcgatgaatatattcaaaatattaagttttcataatttttcctaatagagaattaaagatatta 5505073  T
Q  97 tagataaaaaa 107  Q
     ||||||||||    
T  5505074 aagataaaaaa 5505084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 10435280 - 10435184
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| |||||||| ||||||||||||||||||||||| || ||||||| |||| |||||| || |||||||| ||||||||||    
T  10435280 tgttggaatcgtctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatattaaagataaaacatatgcattg 10435184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 4238749 - 4238831
Alignment:
Q  34 cgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    |||| |||||||| ||||||||||||||||||||||| || ||||||| |||| |||||| || |||||||| ||||||||||    
T  4238749 cgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatattaaagataaaacatatgcattg 4238831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 9281408 - 9281307
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgac 118  Q
    ||||||| || ||| |||| |||||||||||||||| || |||||||||||| ||||||||||| |||||||||| |  || | |||| |||||||||||    
T  9281408 atgttgggttcgtctcgatgaatattttcaaaatatcaaattttcataattttttctaatagattattaaagatatttaagttcaaaattatgcattgac 9281309  T
Q  119 at 120  Q
    ||    
T  9281308 at 9281307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 39435165 - 39435246
Alignment:
Q  35 gataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    |||| |||||||||||||||||| |||||||||||| ||  |||||||||||||| ||| || |||||||||||||| ||||    
T  39435165 gatagatattttcaaaatattaaattttcataattttttaaaatagataattaaaaatattacagataaaaaatatgtattg 39435246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 32951251 - 32951347
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| |||||||| ||||||||||||||||||||||| || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  32951251 tgttggaatcgtctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagataccaaagataaaacatatgcattg 32951347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 3547536 - 3547631
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||||||||||| || || ||||||||| ||||||  | |||||||| ||||||||||    
T  3547536 tgttggattcgtctcgatgaatatttttaaaatattaaattttcataattt-ttttagtagataattgaagatatcaaagataaaacatatgcattg 3547631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 17053010 - 17052914
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| |||||||| |||||||||| |||||||||||| || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  17053010 tgttggaatcgtctcgatgaatatttttaaaatattaaattttcataattttttttaatagaaaattgaagatatcaaagataaaacatatgcattg 17052914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 50029287 - 50029375
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaa 107  Q
    |||||||||| ||| | || |||||||| |||||||||| |||||||||||| ||  |||| ||||||||||||| || ||||||||||    
T  50029287 atgttggattcgtctcaatgaatattttaaaaatattaaattttcataatttttttaaatatataattaaagatattaaagataaaaaa 50029375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 4016579 - 4016653
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||| ||  |||| |||||||| ||||||| || |||||||||||| ||||||||||| ||||||||||    
T  4016579 atgttggattcgtttcgatgaatatttttaaaatatcaaattttcataattttttctaatagattattaaagata 4016653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 9794310 - 9794420
Alignment:
Q  40 atattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgacatgtataagagagttaattgt 139  Q
    ||||||| |||||||  | ||||||| |||| ||||||||||||||| |||||| || ||||||||| ||| |||||| |||| | | ||||| || |||    
T  9794310 atatttttaaaatatcgaattttcattattttttctaatagataattgaagatattaaagataaaaattattcattgatatgtgtgatagagtcaactgt 9794409  T
Q  140 gtcatttaata 150  Q
    |||| ||||||    
T  9794410 gtcacttaata 9794420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18971518 - 18971448
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    ||||||||||| |||||| |||||| ||||||| |||| |||||||||||||||| || ||||||||||||    
T  18971518 ataaataatatcatataagatgttgaatttgtctcgatgaatattttcaaaatatgaaattttcataattt 18971448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 46764009 - 46764086
Alignment:
Q  39 aatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    |||||||||||||| | || ||||||||||||  | |||||||||||| |||||| || ||||||||||||||||||||    
T  46764009 aatattttcaaaatctaaaattttcataattttat-taatagataatttaagatattaaagataaaaaatatgcattga 46764086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 5852603 - 5852530
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||| || ||||||||||||| ||| ||| || |||| ||||||| ||||||||||| ||||||||||    
T  5852603 tgttggatttatctcgataaatatttttaaattatcaaatttttataattttttctaatagattattaaagata 5852530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 7671428 - 7671525
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    ||||||||| ||| |||| |||||||| |||||||||  |||||||||||| || || |||| |||| ||||||  | |||||||| |||||||||||    
T  7671428 tgttggattcgtctcgatgaatatttttaaaatattatattttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcattga 7671525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 142
Target Start/End: Original strand, 35135829 - 35135946
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgaca 119  Q
    |||| |||| ||| |||| ||||||||| ||||||||| ||| |||||||| || |||||||||||||||||||    | | |||||||||||||| | |    
T  35135829 tgttagattcgtctcgatgaatattttccaaatattaaatttacataattt-ttataatagataattaaagata----aaaaaaaaaatatgcattaata 35135923  T
Q  120 tgtataagagagttaattgtgtc 142  Q
    ||| ||| ||||| |||||||||    
T  35135924 tgtgtaacagagtcaattgtgtc 35135946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 35764844 - 35764920
Alignment:
Q  39 aatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    |||||||||||||| | || ||||||||||||  | |||||||||||| |||||| || |||||||||||||||||||    
T  35764844 aatattttcaaaatgtaaaattttcataattttat-taatagataatttaagatattaaagataaaaaatatgcattg 35764920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 53066520 - 53066424
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| ||| | || |||||||| ||| |||||| |||| ||||||| || |||||||||||| ||||||  | |||||||| ||||||||||    
T  53066520 tgttggattcgtctcaatgaatatttttaaactattaaatttttataattttttttaatagataattgaagatatcaaagataaaacatatgcattg 53066424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 3648248 - 3648161
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaa 107  Q
    ||||||||| ||| |||| ||||||||| ||||||||| | |||||| ||| ||| |||| ||||||||||||| || || |||||||    
T  3648248 tgttggattcgtctcgattaatattttcgaaatattaaatattcatatttttttcaaatatataattaaagatattaaagctaaaaaa 3648161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 39557528 - 39557477
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||||||||||||| |||| |||||||||||||||| || ||||||||||||    
T  39557528 atgttggatttgtctcgattaatattttcaaaatatcaaattttcataattt 39557477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 48690199 - 48690113
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaa 107  Q
    ||||||||| ||| |||| ||||| ||||||||||||| |||| ||||||| |||||||| ||||||||| ||| || | ||||||||    
T  48690199 tgttggattcgtctcgatgaatatcttcaaaatattaaatttttataattt-ttctaataaataattaaaaatattaaaaataaaaaa 48690113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 9211195 - 9211138
Alignment:
Q  36 ataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||||||||| |||||||||| |||| ||||||| | |||||| |||||||||||||    
T  9211195 ataaatattttgaaaatattaaatttttataatttttgctaatatataattaaagata 9211138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 9776634 - 9776711
Alignment:
Q  40 atattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    |||||| ||||| || || ||||||| |||| ||||||||||||||| |||||| || ||||||||| ||| ||||||    
T  9776634 atatttacaaaaaatcaaattttcattattttttctaatagataattgaagatattaaagataaaaattattcattga 9776711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 21797672 - 21797745
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  21797672 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 21797745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 10228668 - 10228600
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| ||| |||| |||||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  10228668 gattcgtctcgatgaatattttcaaaatatcaaattttcataattttttctaatatattattcaagata 10228600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 20548996 - 20549096
Alignment:
Q  5 ataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataa 103  Q
    ||||||| |||||| ||||| ||||  || |||| |||||||| |||||||||| |||| ||||||| ||  |||||||||||||| ||| || ||||||    
T  20548996 ataatatcatataagatgttagattcctctcgattaatatttttaaaatattaaatttttataattttttaaaatagataattaaatatattaaagataa 20549095  T
Q  104 a 104  Q
    |    
T  20549096 a 20549096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 29588495 - 29588563
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| ||| ||||||||||||||||||||| || |||||||||||| || ||||| || ||| ||||||    
T  29588495 gattcgtctcgataaatattttcaaaatatcaaattttcataatttcttttaatatattattcaagata 29588563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 33462797 - 33462926
Alignment:
Q  1 ataaataatattatataaa----tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataata 96  Q
    ||||||||||| |||||||    |||| |||| ||| |||| |||||||||||||||| || |||||||||||| |||| ||| || ||| |||||| |     
T  33462797 ataaataatatcatataaaatgttgttagattcgtctcgatgaatattttcaaaatatcaaattttcataattttttcttatatattattcaagatattt 33462896  T
Q  97 tagataaaaaatatgcattgacatgtataa 126  Q
     || | |||| ||||||||| |||| ||||    
T  33462897 aagctcaaaattatgcattggcatgcataa 33462926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 43394525 - 43394430
Alignment:
Q  1 ataaataatattatataa-atgt--tggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||||||||| |||||| ||||  |||||| ||| |||| | |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  43394525 ataaataatatcatataagatgtcttggattcgtctcgatgagtattttcaaaatatcaaattttcataattttttctaatatattattcaagata 43394430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 6910450 - 6910521
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaaga 91  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||    
T  6910450 tgtttgatttgtctcgaaaaatattttcaaaatattaaatttttataattttttactttagataattaaaga 6910521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 19824017 - 19824084
Alignment:
Q  26 atttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  19824017 atttgtctcgacaaatattttcaaaatattaaatttttataattttttactgtagataattaaagata 19824084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 39099078 - 39099173
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataat-ttattctaatagataattaaagataatatagataaaaaatatgcat 114  Q
    |||| |||| ||| |||| |||||||||||||||| || || ||||||| || |||||||  |||||||||||||  | ||||| |||||||||||    
T  39099078 tgttagattcgtctcgatgaatattttcaaaatataaaattctcataatgtttttctaatttataattaaagatatcaaagatataaaatatgcat 39099173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 40415037 - 40415096
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaata 79  Q
    |||||||||| || |||| |||||||| ||||||| || |||||||||||| ||||||||    
T  40415037 tgttggatttatctcgatgaatatttttaaaatatcaaattttcataattttttctaata 40415096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 44821464 - 44821405
Alignment:
Q  34 cgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  44821464 cgatgaatattttcaaaatatcaaattttcataattttttctaatatattattcaagata 44821405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 13499481 - 13499431
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  13499481 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 13499431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 20765312 - 20765362
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  20765312 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 20765362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 21005409 - 21005459
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  21005409 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 21005459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 27010620 - 27010570
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  27010620 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 27010570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 27334877 - 27334827
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  27334877 tgtttgatttgtctcgaaaaatattttcaaaatattaaatttttataattt 27334827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 30213920 - 30213970
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  30213920 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 30213970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 33415915 - 33415965
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  33415915 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 33415965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 121
Target Start/End: Complemental strand, 36594355 - 36594261
Alignment:
Q  28 ttgtcacgataaatattttcaaaatattaagttttcataa-tttattctaatagataattaaagataatatagataaaaaatatgcattgacatg 121  Q
    ||||| |||| |||||||||||||||| || ||||||||| ||| |||||||| || ||| |||||| |  || | |||| ||||||||||||||    
T  36594355 ttgtctcgatgaatattttcaaaatatcaaattttcataatttttttctaatatattattcaagatatttaagctcaaaattatgcattgacatg 36594261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 37166574 - 37166656
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagat 82  Q
    |||||||||||||||||| |||  ||||| ||| |||| |||||||| ||||||| || |||| ||||||| |||||| ||||    
T  37166574 ataaataatattatataagatgagggattcgtctcgatgaatatttttaaaatatcaaatttttataattttttctaagagat 37166656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 39866287 - 39866237
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  39866287 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 39866237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 42490342 - 42490292
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  42490342 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 42490292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 43370429 - 43370479
Alignment:
Q  43 ttttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||||||||||||| |||||||||||| |||||||| || ||| ||||||    
T  43370429 ttttcaaaatattaaattttcataattttttctaatatattattcaagata 43370479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 43467888 - 43467782
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgaca 119  Q
    |||| |||||||| ||| ||||||||||||||||||||  ||| ||||||| ||    |||||||||||||||| ||  | | |||| | ||||||||||    
T  43467888 tgtttgatttgtctcgacaaatattttcaaaatattaaacttttataattttttactttagataattaaagatattaacggtcaaaattgtgcattgaca 43467789  T
Q  120 tgtataa 126  Q
    | |||||    
T  43467788 tatataa 43467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 49057988 - 49057906
Alignment:
Q  34 cgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    |||| |||||||| |||||||||| |||||||||||| || |  |||| |||| ||||||  | |||||||| ||||||||||    
T  49057988 cgatgaatatttttaaaatattaaattttcataattttttttggtagagaattgaagatatcaaagataaaacatatgcattg 49057906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 935123 - 935204
Alignment:
Q  1 ataaataatattatataaa-tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaataga 81  Q
    ||||||||||| ||||||| | ||| ||| ||| |||| ||||||||  ||||||||| |||||||||||  ||||||||||    
T  935123 ataaataatatcatataaaatattgtattcgtctcgatgaatattttttaaatattaaattttcataattgtttctaataga 935204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 122
Target Start/End: Complemental strand, 1334221 - 1334140
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgacatgt 122  Q
    |||||||||||||| || |||| ||||||| |||||||| || ||| |||||| |  || | |||| |||||||||||||||    
T  1334221 tattttcaaaatatcaaatttttataattttttctaatatattatttaagatatttaagctcaaaattatgcattgacatgt 1334140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 32220949 - 32221022
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| ||||||||| |||||||||| |||| ||||||| ||    ||||||||||||||||    
T  32220949 tgtttgatttgtctcgacaaatatttttaaaatattaaatttttataattttttactttagataattaaagata 32221022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 41747955 - 41747821
Alignment:
Q  1 ataaataatattatataaa-tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    ||||||||||  ||||||| | |||||||| |  |||||||||| ||||||||||||| |||| ||| ||| | ||| || ||||||||||||  || |     
T  41747955 ataaataatagcatataaaatattggatttatttcgataaatatattcaaaatattaaatttttatactttttactagtacataattaaagat--taaaa 41747858  T
Q  100 ataaaaaatatgcattgacatgtataagagagttaat 136  Q
     |||||||| ||| || |||||||| | |||||||||    
T  41747857 ttaaaaaatgtgcgttaacatgtatgaaagagttaat 41747821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 12948160 - 12948228
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| ||| |||||| |||||||||||||| || |||||||||||| ||| |||| || ||| ||||||    
T  12948160 gattcgtctcgataagtattttcaaaatatcaaattttcataattttttccaatatattattcaagata 12948228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 18013393 - 18013341
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  18013393 tattttcaaaatatcaaattttcataattttttctaatatattattcaagata 18013341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 29720511 - 29720583
Alignment:
Q  21 gttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||| ||| |||| | |||||||||||||| || |||||||||||| ||| |||| || ||| ||||||    
T  29720511 gttggattcgtctcgatgagtattttcaaaatatcaaattttcataattttttccaatatattattcaagata 29720583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 32285291 - 32285387
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||||||| |||| |||||||| |||||||||| | || |||| || || || |||| |||| ||||||  | |||||||| ||||| ||||    
T  32285291 tgttggatttgtctcgatgaatatttttaaaatattaaatctttataagtttttttagtagagaattgaagatatcaaagataaaacatatgtattg 32285387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 36179059 - 36179007
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  36179059 tattttcaaaatatcaaattttcataattttttctaatatattattcaagata 36179007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 36665164 - 36665069
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    |||||||||  || |||| |||||||| |||||||||  |||||||||||| || ||||||| || | ||||||  | |||||||| ||||||||||    
T  36665164 tgttggattcatctcgatgaatatttttaaaatattatattttcataattt-ttttaatagagaaatgaagatatcaaagataaaacatatgcattg 36665069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 32300736 - 32300586
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    ||||||||||| | |||| |||||||||| ||| |||| ||||||||| ||||||||| |||||||||||| || ||||||||||||||||||| || ||    
T  32300736 ataaataatataaaataagatgttggattcgtctcgattaatattttctaaatattaaattttcataattttttataatagataattaaagatattaaag 32300637  T
Q  100 ataaaaaatatgcattgacatgtataagagagttaattgtgtcatttaata 150  Q
    |||||||||||||||||| || | | | ||||| || ||||||||||||||    
T  32300636 ataaaaaatatgcattgatatttgtgacagagtcaactgtgtcatttaata 32300586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 21961373 - 21961271
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgaca 119  Q
    ||||||||| ||| |||| ||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| || |||||||| ||||| ||||| |    
T  21961373 tgttggattcgtctcgatgaatattttcaaaatattaaattttaataattttttctaatagataattaaagatattaaagataaaacatatgaattgata 21961274  T
Q  120 tgt 122  Q
    |||    
T  21961273 tgt 21961271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 35641861 - 35641974
Alignment:
Q  1 ataaataatattatataaa----tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataata 96  Q
    ||||||||||| |||||||    ||||||||||||| ||||||||||||| |||||||||| |||||||||||| ||| |||||||||||||||||| ||    
T  35641861 ataaataatatcatataaaatgttgttggatttgtctcgataaatatttttaaaatattaaattttcataattttttcaaatagataattaaagatatta 35641960  T
Q  97 tagataaaaaatat 110  Q
       |||||||||||    
T  35641961 acaataaaaaatat 35641974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 970284 - 970188
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| |||||||| ||||||||||||||||||||||| || ||||||| |||| ||||||| | |||||||| ||||||||||    
T  970284 tgttggaatcgtctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagataacaaagataaaacatatgcattg 970188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 4299948 - 4300043
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| ||||||||||||| ||||||||||||||||||||||| || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  4299948 tgttggaatcgtctcgataaatatttttaaaatattaagttttcataattt-ttttaatagagaattgaagatatcaaagataaaacatatgcattg 4300043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 39405910 - 39405814
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| ||| |||| ||||||||||||||||||||||| || ||||||| |||| |||||| || |||||||| ||||||||||    
T  39405910 tgttggaatcgtctcgatgaatctttttaaaatattaagttttcataattttttttaatagagaattgaagatattaaagataaaacatatgcattg 39405814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 22613838 - 22613920
Alignment:
Q  34 cgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    |||| |||||||| ||||||||||||||||||||||| || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  22613838 cgatgaatatttttaaaatattaagttttcataattttttttaatagaaaattgaagatatcaaagataaaacatatgcattg 22613920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 43067375 - 43067279
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| |||||||| ||||||||||||||||||||||| || ||||| | |||| ||||||  | |||||||| ||||||||||    
T  43067375 tgttggaatcgtctcgatgaatatttttaaaatattaagttttcataattttttttaataaagaattgaagatatcaaagataaaacatatgcattg 43067279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 2864100 - 2864027
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||||||| ||| |||| |||||||| ||||||||||||||||||||||| || || |||| |||| ||||||    
T  2864100 tgttggattcgtctcgatgaatatttttaaaatattaagttttcataattttttttagtagagaattgaagata 2864027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 150
Target Start/End: Original strand, 36578722 - 36578831
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgacatgtataagagagttaattgtg 140  Q
    |||||||||||||| || |||||||||||| ||||||||||| ||| |||||| |  |||| |||| | |||||||| || ||| | |||||||| |||     
T  36578722 tattttcaaaatatcaaattttcataattttttctaatagattattcaagatatttaagatgaaaattgtgcattgatatatatgacagagttaactgta 36578821  T
Q  141 tcatttaata 150  Q
    ||| ||||||    
T  36578822 tcacttaata 36578831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 15268257 - 15268161
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattta-ttctaatagataattaaagataatatagataaaaaatatgcatt 115  Q
    ||||||||| ||| |||| || | |||||||||||||| ||||||||||||| || ||||||| |||| |||||| || | |||||| |||||||||    
T  15268257 tgttggattcgtctcgatgaaaaatttcaaaatattaaattttcataatttatttttaatagagaattgaagatattaaaaataaaacatatgcatt 15268161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 17407394 - 17407454
Alignment:
Q  34 cgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataa 94  Q
    |||| |||||||| |||||||||| |||| ||||||| ||| |||||||||||||||||||    
T  17407394 cgattaatatttttaaaatattaaatttttataattttttcaaatagataattaaagataa 17407454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 32002129 - 32002225
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||||||| |||| | |||||| |||||||||| |||| ||||||| || || |||| |||| ||||||  | |||||||| ||||||||||    
T  32002129 tgttggatttgtctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattg 32002225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 30788326 - 30788421
Alignment:
Q  26 atttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgacatg 121  Q
    ||||||| |||| |||||||||||||||| || |||||||||||| || ||||| || ||| |||||| |  || | |||| ||||||||||||||    
T  30788326 atttgtctcgatgaatattttcaaaatatcaaattttcataattttttttaatatattattcaagatatttaagctcaaaattatgcattgacatg 30788421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 32382065 - 32381978
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaa 107  Q
    ||||| ||| ||| |||| |||||||| |||||||||| ||||||||| || ||||||| || ||||||||||| || | ||||||||    
T  32382065 tgttgtattcgtctcgatgaatattttaaaaatattaaattttcataagtttttctaattgagaattaaagatattaaaaataaaaaa 32381978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 25773190 - 25773110
Alignment:
Q  39 aatattttcaaaatattaagttttcataatttattctaatagataattaaagataatat---agataaaaaatatgcattg 116  Q
    |||||||| ||||| |||| |||||||||||| || ||||||||||||||| ||| |||    ||||||||||||||||||    
T  25773190 aatatttttaaaattttaaattttcataattttttataatagataattaaatatagtattaaggataaaaaatatgcattg 25773110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 29627414 - 29627312
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgaca 119  Q
    ||||||||| ||| |||| | |||||| |||||||||| |||| ||||||| || || |||| |||| ||||||  | |||||||| ||||||||||| |    
T  29627414 tgttggattcgtctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgata 29627315  T
Q  120 tgt 122  Q
    |||    
T  29627314 tgt 29627312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 35290817 - 35290867
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| |||||||||||||||||||||||| |||| |||||||    
T  35290817 tgttcgatttgtctcgataaatattttcaaaatattaaatttttataattt 35290867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 122
Target Start/End: Complemental strand, 1918774 - 1918677
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgacatgt 122  Q
    |||| ||| |||| |||||||||||||||| || |||||||||||| |||||||| || ||| |||||| |  || | |||| ||||||||| |||||    
T  1918774 gattcgtctcgatgaatattttcaaaatatcaaattttcataattttttctaatatattattcaagatatttaaggtcaaaattatgcattggcatgt 1918677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 19889799 - 19889704
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| ||| |||| |||||||| |||||||| | |||||||||||| || || |||| |||| ||||||  | |||||||| ||||||||||    
T  19889799 tgttggattcgtctcgatgaatatttttaaaatattcaattttcataattt-ttttagtagagaattgaagatatcaaagataaaacatatgcattg 19889704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 26802045 - 26801977
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| ||| |||| |||||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  26802045 gattcgtctcgatgaatattttcaaaatatcaaattttcataattttttctaatatattattcaagata 26801977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 26809595 - 26809527
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| ||| |||| |||||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  26809595 gattcgtctcgatgaatattttcaaaatatcaaattttcataattttttctaatatattattcaagata 26809527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 34112078 - 34112146
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  34112078 gatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 34112146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 37843690 - 37843786
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||||||||||| || |  |||| |||| ||||||  | | |||||| ||||||||||    
T  37843690 tgttggattcgtctcgatgaatatttttaaaatattaaattttcataatttttttttgtagagaattgaagatatcaaatataaaacatatgcattg 37843786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 16048231 - 16048133
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataa--tttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| |||||||| |||||||||||||||||| |  ||| || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  16048231 tgttggaatcgtctcgatgaatatttttaaaatattaagttttcattattttttttttaatagagaattgaagatatcaaagataaaacatatgcattg 16048133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 27674346 - 27674405
Alignment:
Q  34 cgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| ||||||||||||||||||| |||||||||||| | |||||| || ||| ||||||    
T  27674346 cgatgaatattttcaaaatattaaattttcataatttttcctaatacattattcaagata 27674405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 978193 - 978243
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  978193 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 978243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 1830801 - 1830751
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    ||||||||| ||| |||| |||||||| |||||||||| ||||||||||||    
T  1830801 tgttggattcgtctcgatgaatatttttaaaatattaaattttcataattt 1830751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 3135476 - 3135566
Alignment:
Q  17 aaatgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaa 107  Q
    ||||||||| || ||| | || |||||||| |||||||||  |||||||||||| || ||||||| |||| |||||| || || |||||||    
T  3135476 aaatgttgggttcgtctcaatgaatatttttaaaatattatattttcataattttttataatagagaattgaagatattaaagttaaaaaa 3135566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 5985054 - 5985116
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagat 82  Q
    ||||||||| ||| |||| |||||||||||||||| ||  ||| ||||||| |||||||||||    
T  5985054 tgttggattcgtctcgatcaatattttcaaaatatcaaaattttataattttttctaatagat 5985116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 9050722 - 9050672
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  9050722 tgtttgatttgtctcgaaaaatattttcaaaatattaaatttttataattt 9050672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 9502773 - 9502723
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  9502773 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 9502723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 14634303 - 14634253
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  14634303 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 14634253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 24520355 - 24520281
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||| ||| ||| ||||||||||||| |||||||||| |||||||||   ||| ||||||| |||| ||||||    
T  24520355 atgttgtattcgtctcgataaatatttttaaaatattaaattttcataaaaaattttaatagagaattgaagata 24520281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 119
Target Start/End: Complemental strand, 27579571 - 27579477
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgaca 119  Q
    |||||||| | | |||||||||||||||||||| |||| ||||||| ||    |||||||||||||||| ||  ||| |||  ||||||||||||    
T  27579571 gatttgtctcaacaaatattttcaaaatattaaatttttataattttttactttagataattaaagatattaacgatcaaagttatgcattgaca 27579477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 30779861 - 30779911
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||||||||||||  ||| |||||||| |||||||||| ||||||||||||    
T  30779861 tgttggatttgtcttgatgaatatttttaaaatattaaattttcataattt 30779911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 33387336 - 33387386
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  33387336 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 33387386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 34347605 - 34347659
Alignment:
Q  39 aatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  34347605 aatattttcaaaatatcaaattttcataattttttctaatatattattcaagata 34347659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 40316268 - 40316218
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    ||||||||| ||| |||| |||||||| |||||||||| ||||||||||||    
T  40316268 tgttggattcgtctcgatgaatatttttaaaatattaaattttcataattt 40316218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 41411272 - 41411322
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    ||||||||| ||| |||| |||||||| |||||||||| ||||||||||||    
T  41411272 tgttggattcgtctcgatgaatatttttaaaatattaaattttcataattt 41411322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 41625288 - 41625214
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||| ||| |||  ||||||||  ||||||||| |||||||||||| ||| |||| || ||||||||||    
T  41625288 atgttggattcgtctcgacgaatattttttaaatattaaattttcataattttttcgaataaattattaaagata 41625214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 898447 - 898374
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| ||||||||  |||||||||||| ||||||| || |||| ||||||| || | ||| |||||||||||||    
T  898447 tgtttgatttgtcttgataaatatttttaaaatatcaaatttttataattttttattatatataattaaagata 898374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 3472423 - 3472350
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| ||||  |||||| ||    ||||||||||||||||    
T  3472423 tgtttgatttgtcgcgacaaatattttcaaaatattaaatttttttaattttttactttagataattaaagata 3472350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 6996096 - 6996169
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| |||| |||||||||||||||| || |||| ||||||| || | ||| |||| ||||||||    
T  6996096 tgtttgatttgtctcgatgaatattttcaaaatatcaaatttttataattttttattatatataactaaagata 6996169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 12359967 - 12359895
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| |||| |||||||||||||||| || |||| ||||||| || | ||| |||||||||||||    
T  12359967 tgtttgatttgtctcgatgaatattttcaaaatatcaaatttttataattt-ttattatacataattaaagata 12359895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 27109804 - 27109877
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| ||||  |||||| ||    ||||||||||||||||    
T  27109804 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttgtaattttttactttagataattaaagata 27109877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 33587615 - 33587542
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| | | |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  33587615 tgtttgatttgtctcaacaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 33587542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 40156314 - 40156387
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| ||||||||| |||||||||| |||| ||||||| ||    ||||||||||||||||    
T  40156314 tgtttgatttgtctcgacaaatattttaaaaatattaaatttttataattttttactttagataattaaagata 40156387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 3422351 - 3422283
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||||||  |||||||||||| |||||||||| |||| ||||||| ||   | |||||||||||||||    
T  3422351 gatttgtcttgataaatatttttaaaatattaaatttttataattttttaccacagataattaaagata 3422283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 14355619 - 14355687
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||| |||| | |||||||||||||| || |||||||||||| || ||||| || ||| ||||||    
T  14355619 gatttgtctcgatgagtattttcaaaatatcaaattttcataattttttataatatattatttaagata 14355687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 14639643 - 14639591
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  14639643 tattttcaaaatatcaaattttcataattttttctaatatattattcaagata 14639591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 25946264 - 25946300
Alignment:
Q  74 ctaatagataattaaagataatatagataaaaaatat 110  Q
    |||||||| |||||||||||||| |||||||||||||    
T  25946264 ctaatagaaaattaaagataataaagataaaaaatat 25946300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 26824622 - 26824554
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| ||| |||| |||||||||||||||| || |||||||||||| | |||||| || ||| ||||||    
T  26824622 gattcgtctcgatgaatattttcaaaatatcaaattttcataatttttactaatatattattcaagata 26824554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 32110570 - 32110518
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  32110570 tattttcaaaatatcaaattttcataattttttctaatatattattcaagata 32110518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 4033457 - 4033335
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    |||||||||||||||||| |||||||||| |||  ||| ||||||||||||||| ||| |||||||||||| ||  |||||||||||||| ||| || ||    
T  4033457 ataaataatattatataagatgttggattcgtcttgatgaatattttcaaaatactaaattttcataatttttttaaatagataattaaatatattaaag 4033358  T
Q  100 ataaaaaatatgcattgacatgt 122  Q
    |||||||||||||||||| ||||    
T  4033357 ataaaaaatatgcattgatatgt 4033335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 9821255 - 9821148
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    ||||||||||| |||||| |||||||||| ||| ||||||| ||||||||||| |||| |||||||||||| |||||||||||||||||||||| |  ||    
T  9821255 ataaataatatcatataagatgttggattcgtcccgataaacattttcaaaatgttaaattttcataattttttctaatagataattaaagatatttaag 9821156  T
Q  100 ataaaaaa 107  Q
    ||||||||    
T  9821155 ataaaaaa 9821148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 10723180 - 10723073
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    ||||||||||| |||||| |||||||||| ||| ||||||| ||||||||||| |||| |||||||||||| |||||||||||||||||||||| |  ||    
T  10723180 ataaataatatcatataagatgttggattcgtcccgataaacattttcaaaatgttaaattttcataattttttctaatagataattaaagatatttaag 10723081  T
Q  100 ataaaaaa 107  Q
    ||||||||    
T  10723080 ataaaaaa 10723073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 3680440 - 3680534
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataa 94  Q
    ||||||||||| |||||| |||||||||| ||  ||||||||| ||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  3680440 ataaataatatcatataagatgttggattcgtttcgataaatactttcaaaatatgaaattttcataattttttctaatagataattaaagataa 3680534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 40348576 - 40348459
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    ||||||||||| |||||| |||||||||| |||  ||| ||||||||||||||||||| |||||| ||   |||| |||||||||||||| ||| || ||    
T  40348576 ataaataatatcatataagatgttggattcgtctagattaatattttcaaaatattaaattttcaaaaaaaattcaaatagataattaaatatattaaag 40348477  T
Q  100 ataaaaaatatgcattga 117  Q
    ||||||||||||||||||    
T  40348476 ataaaaaatatgcattga 40348459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 26203177 - 26203268
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatg 111  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||||||||||| |||||||| ||||||||||||| || | ||||||||||||    
T  26203177 tgttggattcgtctcgatgaatattttaaaaatattaaattttcataattttttctaatatataattaaagatattaaaaataaaaaatatg 26203268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 38198627 - 38198525
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgaca 119  Q
    ||||||||| ||| |||| ||||||||  ||||||||| |||||||||||| ||| |||| ||||||||| ||| || |||||||||||||||||||| |    
T  38198627 tgttggattcgtctcgattaatatttttcaaatattaaattttcataattttttcaaatacataattaaatatattaaagataaaaaatatgcattgata 38198528  T
Q  120 tgt 122  Q
    |||    
T  38198527 tgt 38198525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 29255334 - 29255456
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    ||||||||||| |||||| |||||| ||| ||| |||||||||||||||||||| ||  |||||||||||  || ||||||||||||||||||| || |     
T  29255334 ataaataatatcatataagatgttgaattcgtctcgataaatattttcaaaatactacattttcataatt--ttttaatagataattaaagatattaaaa 29255431  T
Q  100 ataaaaaatatgcattgacatgtat 124  Q
    ||||||| |||| ||||| ||||||    
T  29255432 ataaaaattatgtattgatatgtat 29255456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 36643308 - 36643212
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| ||||||||||||| ||||||||||||||||||||||| || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  36643308 tgttggaatcgtctcgataaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattg 36643212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 35500862 - 35500958
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| |||||||| ||||||||||||||||||||||| || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  35500862 tgttggaatcgtctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattg 35500958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 10464244 - 10464326
Alignment:
Q  34 cgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    |||| |||||||| ||||||||||||||||||||||| || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  10464244 cgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattg 10464326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 23474084 - 23474181
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    ||||||||| |||||||| |||||||| |||||||||| |||| ||||||| || || |||| |||| ||||||  | |||||||| |||||||||||    
T  23474084 tgttggattcgtcacgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattga 23474181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 47841172 - 47841260
Alignment:
Q  7 aatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataa 94  Q
    ||||| |||||| |||||||||| ||| |||  ||||||||||||| ||||| |||||||||||| ||  |||||||||||||||||||    
T  47841172 aatatcatataagatgttggattcgtctcgaacaatattttcaaaacattaaattttcataatttttttaaatagataattaaagataa 47841260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 23348490 - 23348600
Alignment:
Q  39 aatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgacatgtataagagagttaattg 138  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||| ||||||||| ||  ||  ||||||||||||||| || | | | ||||| || ||    
T  23348490 aatattttcaaaatattaaattttcatatttta-tctaatagatagttaaagatattaatgacgaaaaatatgcattgatatatgtgaaagagtcaactg 23348588  T
Q  139 tgtcatttaata 150  Q
    ||||| ||||||    
T  23348589 tgtcacttaata 23348600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 27248794 - 27248732
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagat 82  Q
    ||||||||| ||| ||||||||||||||||||||| || |||| ||||||| |||||||||||    
T  27248794 tgttggattcgtctcgataaatattttcaaaatatcaaatttttataattttttctaatagat 27248732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 34478140 - 34478222
Alignment:
Q  34 cgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    |||| |||||||| ||||||||||||||||||||||| || || |||| |||| ||||||  | |||||||| ||||||||||    
T  34478140 cgatgaatatttttaaaatattaagttttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcattg 34478222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 33010316 - 33010385
Alignment:
Q  24 ggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||  ||| |||||||||||||||| || |||| ||||||| | ||||||||||||||||||||    
T  33010316 ggatttgtcttgatgaatattttcaaaatatcaactttttataatttttactaatagataattaaagata 33010385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 37231678 - 37231775
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataa-tttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| |||||||| |||||||||||||||||||| ||| || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  37231678 tgttggaatcgtctcgatgaatatttttaaaatattaagttttcataatttttttttaatagagaattgaagatatcaaagataaaacatatgcattg 37231775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 21392164 - 21392068
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    |||| |||| ||| |||| |||||||| |||||||||| |||| ||||||| || || |||| |||||||||||  | |||||||| ||||||||||    
T  21392164 tgttagattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattaaagatatcaaagataaaacatatgcattg 21392068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 35570190 - 35570122
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||| ||||||||||||||||||||| || |||| ||||||| || | ||| |||||||||||||    
T  35570190 gatttgtctcgataaatattttcaaaatatcaaatttttataattttttattatatataattaaagata 35570122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 18795255 - 18795350
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcatt 115  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||||||||||| || || |||| |||| ||||||  | |||||||| |||| ||||    
T  18795255 tgttggattcgtctcgatgaatatttttaaaatattaaattttcataattttttttagtagagaatttaagatatcaaagataaaacatatacatt 18795350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 32431504 - 32431433
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaaga 91  Q
    |||| |||||||| ||||||||||||||||||| |||| |||| ||||||| ||   |||||||||||||||    
T  32431504 tgtttgatttgtctcgataaatattttcaaaatgttaaatttttataattttttgctatagataattaaaga 32431433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 19817427 - 19817523
Alignment:
Q  1 ataaataatattatataa-atgttg---gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||||||||| |||||| ||||||   |||||||| |||| | |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  19817427 ataaataatatcatataagatgttgttagatttgtctcgatgagtattttcaaaatatcaaattttcataattttttctaatatattattcaagata 19817523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 29770589 - 29770683
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcat 114  Q
    |||||||||  || |||| |||||||| |||||||||| |||||||||||| || |||||||  ||| ||||||  | | |||||||||||||||    
T  29770589 tgttggattcttctcgatgaatatttttaaaatattaaattttcataattttttttaatagagcattgaagatatcaaaaataaaaaatatgcat 29770683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 46657779 - 46657713
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataatt 86  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||||||||||| || || |||||||||    
T  46657779 tgttggattcgtctcgatgaatatttttaaaatattaaattttcataattttttttagtagataatt 46657713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 48516343 - 48516289
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttatt 73  Q
    ||||| ||||| || |||||||||||||||||||||||| |||| ||||||||||    
T  48516343 atgttcgatttatctcgataaatattttcaaaatattaaatttttataatttatt 48516289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 20885219 - 20885292
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  20885219 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 20885292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 21379860 - 21379933
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  21379860 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 21379933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 41796825 - 41796715
Alignment:
Q  1 ataaataatattatataaa----tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataata 96  Q
    |||||||||||||||||||    |||| ||||| || |||| |||||||| |||||||||| |||||||||| | ||| |||| |||  |||| ||| ||    
T  41796825 ataaataatattatataaaatgttgttagatttatctcgatgaatatttttaaaatattaaattttcataatattttccaataaatagctaaatatatta 41796726  T
Q  97 tagataaaaaa 107  Q
     ||||||||||    
T  41796725 aagataaaaaa 41796715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 47080709 - 47080828
Alignment:
Q  1 ataaataatattatataa-at---gttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataata 96  Q
    |||||||||||||||||| ||   |||||||||||  |||| |||||||| ||||||| || |||| ||||||| ||||||||||| | ||||| || |     
T  47080709 ataaataatattatataatatgtcgttggatttgtttcgatgaatatttttaaaatatcaaatttttataattttttctaatagattagtaaagttattt 47080808  T
Q  97 tagataaaaaatatgcattg 116  Q
     |||| |||| |||||||||    
T  47080809 aagatcaaaattatgcattg 47080828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 48531468 - 48531371
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||| ||||| | || || |||| |||| ||||||  | |||||||| |||||||||||    
T  48531468 tgttggattcgtctcgatgaatatttttaaaatattaaatttttataatattttttagtagagaattgaagatatcaaagataaaatatatgcattga 48531371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 7336721 - 7336777
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattcta 76  Q
    ||||||||| ||  ||||||||||||| |||||||||| |||||||||||| |||||    
T  7336721 tgttggattcgtttcgataaatatttttaaaatattaaattttcataattttttcta 7336777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 23707564 - 23707496
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  23707564 gatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 23707496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 28185503 - 28185619
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    ||||||||||| || ||| ||||||||||  || |||| | |||||| |||||||||| |||| ||||||| || || |||| |||||||||||  | ||    
T  28185503 ataaataatatcatgtaagatgttggattcatctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattaaagatatcaaag 28185602  T
Q  100 ataaaaaatatgcattg 116  Q
    |||||| ||||| ||||    
T  28185603 ataaaacatatgtattg 28185619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 30342195 - 30342239
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatt 69  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||    
T  30342195 gatttgtctcgataaatattttcaaaatattaaatttttataatt 30342239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 46321293 - 46321225
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||||||  ||||||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  46321293 gatttgtcttgataaatattttcaaaatattaaatttttataattttttactttagataattaaagata 46321225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 115
Target Start/End: Complemental strand, 32337708 - 32337618
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttatt-ctaatagataattaaagataatatagataaaaaatatgcatt 115  Q
    |||| ||| |||| |||||||| |||||||||| ||| |||||||| || | |||||||||||||| ||| || ||||||||||||| ||||    
T  32337708 gattcgtctcgatgaatatttttaaaatattaaattt-cataatttttttcaaatagataattaaatatattaaagataaaaaatatacatt 32337618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 150
Target Start/End: Original strand, 42493808 - 42493875
Alignment:
Q  83 aattaaagataatatagataaaaaatatgcattgacatgtataagagagttaattgtgtcatttaata 150  Q
    ||||||||||| || ||||||||||||| |||||| |||| | | ||||| || ||||||||||||||    
T  42493808 aattaaagatattaaagataaaaaatatacattgatatgtgtgacagagtcaactgtgtcatttaata 42493875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 5309256 - 5309182
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||| ||| ||||||||||||| ||||||| ||  ||| ||||||| | |||||| ||||||| |||||    
T  5309256 atgttggattcgtctcgataaatatttttaaaatatcaaaattttataatttttactaatacataattagagata 5309182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 5788523 - 5788473
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  5788523 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 5788473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 7313046 - 7312988
Alignment:
Q  21 gttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaata 79  Q
    |||||||| ||| |||| |||||||||||||||| || |||| ||||||| ||||||||    
T  7313046 gttggattcgtctcgatgaatattttcaaaatatcaaatttttataattttttctaata 7312988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 14201523 - 14201449
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataa 94  Q
    ||||||||| ||| |||| ||||||||||||||||||| |||  ||||||| ||| ||  |||||| ||||||||    
T  14201523 tgttggattcgtctcgatgaatattttcaaaatattaaatttggataattttttcaaaaggataatgaaagataa 14201449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 28061661 - 28061611
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  28061661 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 28061611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 32619057 - 32619159
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgaca 119  Q
    ||||||||| ||| |||| | |||||| |||||||||| |||| ||||||| || || |||| |||| ||||||  | | |||||| ||||||||||| |    
T  32619057 tgttggattcgtctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaaaataaaacatatgcattgata 32619156  T
Q  120 tgt 122  Q
    |||    
T  32619157 tgt 32619159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 33613382 - 33613312
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    ||||||||||| || ||| |||||| ||| ||| |||| |||||||| |||||||||| ||||||||||||    
T  33613382 ataaataatatcatgtaagatgttgaattcgtctcgatgaatatttttaaaatattaaattttcataattt 33613312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 36623424 - 36623474
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  36623424 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 36623474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 38851993 - 38851943
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  38851993 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 38851943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 39130072 - 39130022
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  39130072 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 39130022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 42890489 - 42890439
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  42890489 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 42890439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 44389401 - 44389451
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    ||||||||| ||| |||| |||||||| |||||||||| ||||||||||||    
T  44389401 tgttggattcgtctcgatgaatatttttaaaatattaaattttcataattt 44389451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 44732128 - 44732178
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  44732128 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 44732178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 45332033 - 45332083
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| ||||||||  ||||||||||||||||||||||| |||| |||||||    
T  45332033 tgtttgatttgtcttgataaatattttcaaaatattaaatttttataattt 45332083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 47156143 - 47156193
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  47156143 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 47156193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 48602552 - 48602602
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  48602552 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 48602602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 48796290 - 48796344
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaata 79  Q
    |||||||| |||| |||||||| |||||||| | |||||||||||| ||||||||    
T  48796290 gatttgtctcgatgaatatttttaaaatattcaattttcataattttttctaata 48796344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 2198718 - 2198791
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||| ||| |||| | ||||| || |  ||||||||||||||||    
T  2198718 tgtttgatttgtctcgacaaatattttcaaaatactaaatttttaaaattttttattttagataattaaagata 2198791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 7439019 - 7439092
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| || |||| ||    ||||||||||||||||    
T  7439019 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttatcattttttactttagataattaaagata 7439092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 7461004 - 7460955
Alignment:
Q  21 gttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||||||| ||| ||||||||||||| |||||||||| |||| |||||||    
T  7461004 gttggattcgtctcgataaatatttttaaaatattaattttttataattt 7460955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 16778621 - 16778694
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||| | ||    ||||||||||||||||    
T  16778621 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataatattttactttagataattaaagata 16778694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 26161720 - 26161765
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||||||| | |||||||||||||||||||||| |||| |||||||    
T  26161720 gatttgtctcaataaatattttcaaaatattaattttttataattt 26161765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 111
Target Start/End: Complemental strand, 40035509 - 40035420
Alignment:
Q  22 ttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatg 111  Q
    ||||||||||| ||||  ||||||| |||||||||| |||| | ||||| |  ||||| ||||||||||||| || |||| ||| |||||    
T  40035509 ttggatttgtctcgatggatatttttaaaatattaaatttttacaatttttaataatacataattaaagatattaaagatcaaatatatg 40035420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 40256173 - 40256245
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||| ||| |||| ||||||| | ||  ||||||||||||||||    
T  40256173 tgtttgatttgtctcgacaaatattttcaaaatagtaaatttttataatttttact-ttagataattaaagata 40256245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 41134634 - 41134561
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| ||||||| |||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  41134634 tgtttgatttgtctcgacaaatattctcaaaatattaaatttttataattttttactttagataattaaagata 41134561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 5529132 - 5529200
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||| | || |||||||||||||||| || |||| ||||||| || | ||| |||||||||||||    
T  5529132 gatttgtctcaatcaatattttcaaaatatcaaatttttataattttttattatatataattaaagata 5529200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 9173264 - 9173184
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgacatg 121  Q
    |||||||||||||| || |||||||||||| || ||||| || ||| |||||| |  || | |||| ||||||||||||||    
T  9173264 tattttcaaaatatcaaattttcataattttttataatatattattcaagatatttaagttcaaaattatgcattgacatg 9173184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 31110754 - 31110666
Alignment:
Q  34 cgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgacatgt 122  Q
    |||| |||||||| |||||||||| |||| ||||||| || || |||| |||| || |||  | |||||||| ||||||||||| ||||    
T  31110754 cgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaaaatatcaaagataaaacatatgcattgagatgt 31110666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 33376895 - 33376962
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| ||| ||||||||||||||||||||| || |||| ||||||| |||||||| || ||| ||||||    
T  33376895 gattagtctcgataaatattttcaaaatatcaaatttttataattt-ttctaatatattattcaagata 33376962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 38850822 - 38850890
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||  |||||| |||||| ||||||| || |||||||||||| |||||||| || ||| ||||||    
T  38850822 gatttgtttcgataagtattttaaaaatatcaaattttcataattttttctaatatattattcaagata 38850890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 40818625 - 40818573
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  40818625 tattttcaaaatatcaaattttcataattttttctaatatattattcaagata 40818573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 70
Target Start/End: Original strand, 41898110 - 41898154
Alignment:
Q  26 atttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    ||||||| ||| |||||||||||||||||||| |||| |||||||    
T  41898110 atttgtctcgacaaatattttcaaaatattaaatttttataattt 41898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 48448654 - 48448706
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  48448654 tattttcaaaatatcaaattttcataattttttctaatatattattcaagata 48448706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 1081 - 1203
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    ||||||||||| |||||| |||||||||| ||| |||  ||||||||||||||||||| |||||||| ||| ||| |||||||||||||| ||  || ||    
T  1081 ataaataatatcatataagatgttggattcgtctcgaagaatattttcaaaatattaaattttcatatttttttcaaatagataattaaaaattttaaag 1180  T
Q  100 ataaaaaatatgcattgacatgt 122  Q
    |||||||||||||||||| ||||    
T  1181 ataaaaaatatgcattgatatgt 1203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 7603399 - 7603521
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    ||||||||||| |||||| |||||||||| ||| |||  ||||||||||||||||||| |||||||| ||| ||| |||||||||||||| ||  || ||    
T  7603399 ataaataatatcatataagatgttggattcgtctcgaagaatattttcaaaatattaaattttcatatttttttcaaatagataattaaaaattttaaag 7603498  T
Q  100 ataaaaaatatgcattgacatgt 122  Q
    |||||||||||||||||| ||||    
T  7603499 ataaaaaatatgcattgatatgt 7603521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 148147 - 148243
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgacatgt 122  Q
    |||||||| ||| |||||||||||||||||||| |||||||||||| || ||||||||||||||| ||| || |||||||||||||| ||||| ||||    
T  148147 gatttgtctcgacaaatattttcaaaatattaaattttcataattt-ttttaatagataattaaaaatattaaagataaaaaatatgtattgatatgt 148243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 42786044 - 42785948
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| ||| |||| ||||||||| ||||||||| |||||||||||| ||  ||||||||||||||| || || ||||||| |||||||||||    
T  42786044 tgttggattcgtctcgattaatattttccaaatattaaattttcataatttttttaaatagataattaaagttattaaagataaataatatgcattg 42785948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 122
Target Start/End: Original strand, 42948366 - 42948469
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgac 118  Q
    |||||||||| ||| || | ||||||||||||||||||| |||||||||||| ||| |||| ||||||||| | | || |||||||||| |||||||||     
T  42948366 atgttggattcgtctcggttaatattttcaaaatattaaattttcataattttttcaaatacataattaaaaaaattaaagataaaaaaaatgcattgat 42948465  T
Q  119 atgt 122  Q
    ||||    
T  42948466 atgt 42948469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 26628017 - 26628091
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataa 94  Q
    ||||||||||||| ||||||||||||| ||||||| |  |||||||||||| ||| |||||||||||||||||||    
T  26628017 tgttggatttgtctcgataaatatttttaaaatataattttttcataattttttcaaatagataattaaagataa 26628091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 7044266 - 7044194
Alignment:
Q  21 gttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataa 94  Q
    ||||||||  || |||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  7044266 gttggattcttctcgatgaatattttcaaaatattaaattttcataattt-ttctaatagataattaaagataa 7044194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 20671531 - 20671628
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    ||||||||| ||| |||| |||||||||||| |||||| |||||||||||| ||  |||| ||||||||||||| || | |||||||||||| |||||    
T  20671531 tgttggattcgtctcgatgaatattttcaaattattaaattttcataatttttttaaatatataattaaagatattaaatataaaaaatatgtattga 20671628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 31127920 - 31128016
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| |||||||| ||||||||||||||||||||||| || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  31127920 tgttggaatcgtctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattg 31128016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 37434723 - 37434660
Alignment:
Q  28 ttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagat 92  Q
    ||||| ||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||    
T  37434723 ttgtctcgataaatatttt-aaaatattaaattttcataatttatactaatagataattaaagat 37434660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 12893697 - 12893580
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    ||||||||||| || ||| ||||| |||| ||| |||| |||||||| |||||||||| |||||||||||| || || |||| |||| ||||||  | ||    
T  12893697 ataaataatatcatgtaagatgttagattcgtctcgatgaatatttttaaaatattaaattttcataattttttttagtagagaattgaagatatcaaag 12893598  T
Q  100 ataaaaaatatgcattga 117  Q
    |||||| |||||||||||    
T  12893597 ataaaacatatgcattga 12893580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 18809422 - 18809326
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| |||||||| ||||| ||||||||||||||||| || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  18809422 tgttggaatcgtctcgatgaatatttttaaaatgttaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattg 18809326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 10536886 - 10536976
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatg 111  Q
    ||||||||| ||| |||| ||||||||||||||||||| |||||||||||  ||  || |||||||| |||||| || ||||||||||||||    
T  10536886 tgttggattcgtctcgatgaatattttcaaaatattaatttttcataattcttttaaacagataatt-aagatattaaagataaaaaatatg 10536976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 1226619 - 1226691
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||||||| ||| ||||| ||||||| |||||||||| |||||||||||| ||||| ||||| ||||||||||    
T  1226619 tgttggattcgtctcgatagatatttttaaaatattaaattttcataattt-ttctattagattattaaagata 1226691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 6470991 - 6470894
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||| ||||||| || || |||| |||| ||||||  | |||||||| |||||||||||    
T  6470991 tgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattga 6470894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 23849730 - 23849803
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||  || ||||||||||||| ||||||| || |||||||||||| |||||||| || ||||||||||    
T  23849730 tgttggattcatctcgataaatatttttaaaatatcaaattttcataattttttctaataaattattaaagata 23849803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 22489419 - 22489320
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgaca 119  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||||| || |  |||||||||||||||| ||  ||| |||| | ||||||||||    
T  22489419 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt-ttattttagataattaaagatattaacgatcaaaattgtgcattgaca 22489321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 13216867 - 13216817
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| ||||||||||||    
T  13216867 tgtttgatttgtctcgacaaatattttcaaaatattaaattttcataattt 13216817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 20671371 - 20671437
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataatt 86  Q
    |||| |||||||| |||| | |||||||||||||| || |||||||||||| |||||||| ||||||    
T  20671371 tgttagatttgtctcgatgagtattttcaaaatatcaaattttcataattttttctaatatataatt 20671437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 132133 - 132206
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  132133 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 132206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 616899 - 616972
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  616899 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 616972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 1580880 - 1580977
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||| |||| || || || |||| |||| ||||||  | |||||||| |||||||||||    
T  1580880 tgttggattcgtctcgatgaatatttttaaaatattaaatttttataaatttttttagtagagaattgaagatatcaaagataaaatatatgcattga 1580977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 14237396 - 14237469
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  14237396 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 14237469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 105
Target Start/End: Complemental strand, 35584104 - 35584035
Alignment:
Q  36 ataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaa 105  Q
    ||||||||||| |||||||||| || || |||||| |||||||||| |||| |||||| || ||||||||    
T  35584104 ataaatatttttaaaatattaaattatcctaattttttctaatagagaattgaagatattaaagataaaa 35584035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 41263926 - 41263999
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  41263926 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 41263999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 42587394 - 42587321
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  42587394 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 42587321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 8496827 - 8496759
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| ||| |||||| |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  8496827 gattcgtctcgataattattttcaaaatatcaaattttcataattttttctaatatattattcaagata 8496759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 25256479 - 25256384
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| |||| ||| |||||||| ||||||| ||||||||||||||| || || |||| |||| ||||||  | |||||||| || |||||||    
T  25256479 tgttggattcgtcatgatgaatatttttaaaatatcaagttttcataattt-ttttagtagagaattgaagatatcaaagataaaacatttgcattg 25256384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 45253913 - 45253845
Alignment:
Q  3 aaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    ||||||||| || ||| |||||||||| ||| |||| |||||||| |||||||||| ||||||||||||    
T  45253913 aaataatatcatgtaagatgttggattcgtctcgatgaatatttttaaaatattaaattttcataattt 45253845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 24524202 - 24524253
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    ||||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  24524202 atgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 24524253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 623292 - 623342
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  623292 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 623342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 2766194 - 2766144
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  2766194 tgtttgatttgtctcgaaaaatattttcaaaatattaaatttttataattt 2766144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 11854652 - 11854574
Alignment:
Q  39 aatattttcaaaatattaagttttcataa-tttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    |||||||| |||||||||||||||||||| ||| || ||||||| |||| ||||||  | | |||||| ||||||||||    
T  11854652 aatatttttaaaatattaagttttcataatttttttttaatagagaattgaagatatcaaaaataaaatatatgcattg 11854574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 18044541 - 18044591
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  18044541 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 18044591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 20167692 - 20167742
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    ||||||||| ||| |||| |||||||| |||||||||| ||||||||||||    
T  20167692 tgttggattcgtctcgatgaatatttttaaaatattaaattttcataattt 20167742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 36642004 - 36641954
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  36642004 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 36641954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 36919753 - 36919811
Alignment:
Q  35 gataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||||||||||||||||||| | |||| ||||||| ||   |||||||||||||||||    
T  36919753 gataaatattttcaaaatattcaatttttataattttttactatagataattaaagata 36919811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 40494500 - 40494550
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  40494500 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 40494550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 44123800 - 44123722
Alignment:
Q  39 aatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    |||||||| |||||||||| |||||||||||| || || |||| |||| |||||   | |||||||| |||||||||||    
T  44123800 aatatttttaaaatattaaattttcataattttttttagtagagaattgaagatttcaaagataaaacatatgcattga 44123722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 44717415 - 44717469
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaata 79  Q
    |||||||| |||| |||||||||||||||| || |||||||||||| || |||||    
T  44717415 gatttgtctcgatgaatattttcaaaatatcaaattttcataattttttataata 44717469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 8394462 - 8394535
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| ||||||||| |||||||||| |||| ||||||| ||    ||||||||||||||||    
T  8394462 tgtttgatttgtctcgacaaatatttttaaaatattaaatttttataattttttactttagataattaaagata 8394535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 14522526 - 14522429
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    ||||||||| |||  ||| |||||||| |||||||||| |||| |||| || || || |||| |||| ||||||  | |||||||| |||||||||||    
T  14522526 tgttggattcgtcttgatgaatatttttaaaatattaaatttttataaatttttttagtagagaattgaagatatcaaagataaaacatatgcattga 14522429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 16345293 - 16345354
Alignment:
Q  21 gttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagat 82  Q
    |||| ||| ||| ||||||||||||||||||||| || |||| ||| ||| |||||||||||    
T  16345293 gttgaattcgtctcgataaatattttcaaaatatcaaatttttatagttttttctaatagat 16345354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 18020985 - 18021058
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| |||| |||||||||||||||| || |||| ||| ||| || | ||| |||||||||||||    
T  18020985 tgtttgatttgtctcgatgaatattttcaaaatatcaaatttttatatttttttattatatataattaaagata 18021058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 23248923 - 23248826
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    ||||||||| ||| |||| | |||||| |||||||||| |||| ||||||| || || |||| |||| || |||  | |||||||| |||||||||||    
T  23248923 tgttggattcgtctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaatatatcaaagataaaacatatgcattga 23248826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 36167824 - 36167897
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| ||||||||||| |||||||| |||| ||||||| ||    ||||||||||||||||    
T  36167824 tgtttgatttgtctcgacaaatattttcagaatattaaatttttataattttttactttagataattaaagata 36167897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 38957286 - 38957359
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| ||||||||| |||||||||| |||| ||||||| ||    ||||||||||||||||    
T  38957286 tgtttgatttgtctcgacaaatattttaaaaatattaaatttttataattttttactttagataattaaagata 38957359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 2732758 - 2732802
Alignment:
Q  81 ataattaaagataatatagataaaaaatatgcattgacatgtata 125  Q
    ||||||||||||| ||||||| ||||||||| |||||||| ||||    
T  2732758 ataattaaagatattatagattaaaaatatgtattgacatatata 2732802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 92
Target Start/End: Complemental strand, 3370402 - 3370330
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagat 92  Q
    |||| |||||||  ||| |||||||||||||||||||| |||| ||||||| ||    |||||||||||||||    
T  3370402 tgtttgatttgtttcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagat 3370330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 3383540 - 3383461
Alignment:
Q  35 gataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcatt 115  Q
    |||||||||||| |||||||||| |||| ||||||| || ||||| | |||| |||| | || |||||||| |||||||||    
T  3383540 gataaatatttttaaaatattaaatttttataattt-ttttaataaagaattgaagaaattaaagataaaatatatgcatt 3383461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 5777479 - 5777427
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  5777479 tattttcaaaatatcaaattttcataattttttctaatatattattcaagata 5777427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 13888566 - 13888514
Alignment:
Q  30 gtcacgataaatattttcaaaatattaagttttcataatttattctaatagat 82  Q
    |||||||| |||||||||||||||| || || | ||||||| |||||||||||    
T  13888566 gtcacgatgaatattttcaaaatatcaaattattataattttttctaatagat 13888514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 27301998 - 27302050
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||||||||||||||| |||||||||||| || ||||| || ||| ||||||    
T  27301998 tattttcaaaatattaaattttcataattttttataatatattattcaagata 27302050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 29917853 - 29917801
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  29917853 tattttcaaaatatcaaattttcataattttttctaatatattattcaagata 29917801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 44887656 - 44887588
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||| |||| | |||||||||||||| || |||||||||||| || ||||| || ||| ||||||    
T  44887656 gatttgtctcgatgagtattttcaaaatatcaatttttcataattttttataatatattattcaagata 44887588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 4e-25; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 17417690 - 17417580
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    ||||||||||| |||||| |||||||||| ||| |||| |||||||| |||||||||| |||||||||||| ||| |||||||||||||||||| || ||    
T  17417690 ataaataatatcatataagatgttggattcgtctcgatcaatatttttaaaatattaaattttcataattttttcaaatagataattaaagatattaaag 17417591  T
Q  100 ataaaaaatat 110  Q
     ||||||||||    
T  17417590 ttaaaaaatat 17417580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 12869390 - 12869296
Alignment:
Q  1 ataaataatattatataaa-tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataa 94  Q
    ||||||||||| ||||||| ||||| ||| ||| |||| |||||||||||||| |||| |||||||||||| ||| |||||||||||||||||||    
T  12869390 ataaataatatcatataaaatgttgaattcgtctcgatgaatattttcaaaattttaaattttcataattttttcaaatagataattaaagataa 12869296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 24693267 - 24693349
Alignment:
Q  34 cgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    |||| ||||||||||||||||||| | ||||||| || |||||||||||||||||| ||| || |||||||||||||| ||||    
T  24693267 cgatgaatattttcaaaatattaaatattcataactttttctaatagataattaaatatattaaagataaaaaatatgtattg 24693349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 16691716 - 16691768
Alignment:
Q  40 atattttcaaaatattaagttttcataatttattctaatagataattaaagat 92  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  16691716 atattttcaaaatattaaattttcataattttttctaatagataattaaagat 16691768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 18998629 - 18998559
Alignment:
Q  24 ggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataa 94  Q
    ||||| ||| |||| ||||||||  ||||||||| |||||||||||| |||||||||||||||||||||||    
T  18998629 ggattcgtctcgatgaatatttttcaaatattaaattttcataattttttctaatagataattaaagataa 18998559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 26210862 - 26210935
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||||||| ||| |||| |||||||||||||||| || |||||||||||| |||||||| || ||||||||||    
T  26210862 tgttggattcgtctcgatgaatattttcaaaatatcaaattttcataattttttctaatatattattaaagata 26210935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 25163310 - 25163214
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| |||||||| ||||||||||||||||||||||| || ||| ||| |||| ||||||  | |||||||| ||||||||||    
T  25163310 tgttggaatcgtctcgatgaatatttttaaaatattaagttttcataattttttttaacagagaattgaagatatcaaagataaaacatatgcattg 25163214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 12226091 - 12226164
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| |||||||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  12226091 tgtttgatttgtctcgataaatattttcaaaatattaaatttttataattttttactttagataattaaagata 12226164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 116
Target Start/End: Original strand, 16434682 - 16434739
Alignment:
Q  59 ttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    |||||||||||| ||| |||||||||||||||||| || |||||| ||||||||||||    
T  16434682 ttttcataattttttcaaatagataattaaagatattaaagataagaaatatgcattg 16434739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 22054888 - 22054961
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||||||||||| ||    ||||||||||||||||    
T  22054888 tgtttgatttgtctcgacaaatattttcaaaatattaaattttcataattttttactttagataattaaagata 22054961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 21540770 - 21540702
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||| ||| |||||||||||||||||||| |||| ||||||| ||  | ||||||||||||||||    
T  21540770 gatttgtctcgacaaatattttcaaaatattaaatttttataattttttacattagataattaaagata 21540702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 33121688 - 33121592
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||||||||||| || |  |||| |||| ||||||  | |||||||| ||||||||||    
T  33121688 tgttggattcgtctcgatgaatatttttaaaatattaaattttcataattttttttggtagagaattgaagatatcaaagataaaacatatgcattg 33121592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 18877293 - 18877219
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||||||||| |  | ||||||||||||||||||| || |||| |||| || || |||||||||||||||||||    
T  18877293 atgttggatttatttcaataaatattttcaaaatatcaaatttttataactttttataatagataattaaagata 18877219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 10599691 - 10599760
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaa 88  Q
    ||||| ||||| || | ||||||||||||||||||| || |||| ||||||| | |||||||||||||||    
T  10599691 atgttcgatttatctcaataaatattttcaaaatatcaattttttataatttctactaatagataattaa 10599760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 15383076 - 15383003
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| ||||| || ||| |||||||||||||||||||| |||| ||||||| ||  | ||||||||||||||||    
T  15383076 tgtttgatttttctcgacaaatattttcaaaatattaaatttttataattttttacattagataattaaagata 15383003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 17257797 - 17257724
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| ||||||||  || |||||||||||||||||||| |||| ||||||| || |  ||||||||||||||||    
T  17257797 tgtttgatttgtctagacaaatattttcaaaatattaaatttttataattttttattttagataattaaagata 17257724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 18668834 - 18668761
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  18668834 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 18668761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 20226444 - 20226371
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||||| ||  | || |||||||||||||    
T  20226444 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttacattaaataattaaagata 20226371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 22120428 - 22120355
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||||| ||  | || |||||||||||||    
T  22120428 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttacattaaataattaaagata 22120355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 24955542 - 24955469
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  24955542 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 24955469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 13207068 - 13207164
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| ||| |||| |||||||| ||||||| || |||||||||||| || |  |||| |||| ||||||  | |||||||| ||||||||||    
T  13207068 tgttggattcgtctcgatgaatatttttaaaatataaaattttcataatttttttttgtagagaattgaagatatcaaagataaaacatatgcattg 13207164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 6563342 - 6563392
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  6563342 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 6563392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 19088104 - 19088054
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  19088104 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 19088054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 31869851 - 31869925
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||| |||||||| | || |||||||||||||||| || |||| ||||||| || | ||| |||||||||||||    
T  31869851 atgtttgatttgtctcaatgaatattttcaaaatatcaaatttttataattttttattatatataattaaagata 31869925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 32414825 - 32414775
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  32414825 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 32414775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 32671932 - 32671982
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  32671932 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 32671982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 10520584 - 10520657
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||||||||||||| |||||||||  |||| ||||||| ||    ||||||||||||||||    
T  10520584 tgtttgatttgtctcgataaatatttttaaaatattacatttttataattttttactttagataattaaagata 10520657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 16193028 - 16192955
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| | | |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  16193028 tgtttgatttgtctcaacaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 16192955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 25475959 - 25475886
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| ||||  |||||| ||    ||||||||||||||||    
T  25475959 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttttaattttttactttagataattaaagata 25475886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 2913017 - 2913085
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| ||| |||||| |||||||||||||| || |||||||||||| ||| |||| || ||| ||||||    
T  2913017 gattcgtctcgataagtattttcaaaatatcaaattttcataattttttccaatatattattcaagata 2913085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 10105931 - 10105999
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| ||| |||| |||||||||||||||| || |||||||||||| ||||| || || ||| ||||||    
T  10105931 gattcgtctcgatgaatattttcaaaatatcaaattttcataattttttctagtatattattcaagata 10105999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 10109343 - 10109291
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  10109343 tattttcaaaatatcaaattttcataattttttctaatatattattcaagata 10109291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 41790508 - 41790396
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||||||||||| ||  |||||||||||| || ||||||||||||||||||| || |     
T  41790508 ataaataatat-atataagatgttggatttgtctcgataaatattttcaaaatactacattttcataattt-ttttaatagataattaaagatattaaaa 41790411  T
Q  100 ataaaaaatatgcat 114  Q
    |||||||||||||||    
T  41790410 ataaaaaatatgcat 41790396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 10181134 - 10181038
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    |||||||||||||  |||||||||||| |||||||||| |||||||||||| ||||||||||||||| || ||| || |||||||| ||||| ||||    
T  10181134 tgttggatttgtcttgataaatatttttaaaatattaaattttcataattttttctaatagataattgaaaatattaaagataaaacatatgtattg 10181038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 10304951 - 10304857
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataa 94  Q
    ||||||||||| |||||| ||||||||||  || |||| ||||||||||||||||||| |||||||||||| ||  |||||||||||||||||||    
T  10304951 ataaataatataatataagatgttggattattctcgatgaatattttcaaaatattaaattttcataatttttttaaatagataattaaagataa 10304857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 32154816 - 32154736
Alignment:
Q  36 ataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||||| |||| ||||| |||||||||||| |||||||||||||||||| ||| ||||||||||| |||| |||||    
T  32154816 ataaatatttttaaaaaattaaattttcataattttttctaatagataattaaatatattatagataaaatatatacattg 32154736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 5390335 - 5390425
Alignment:
Q  17 aaatgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaa 107  Q
    ||||||| |||||||| || | |||||||| |||||||||| |||||||||||| ||||| |||||||||||||||  || ||||||||||    
T  5390335 aaatgttagatttgtctcgttgaatatttttaaaatattaaattttcataattttttctattagataattaaagatgttaaagataaaaaa 5390425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 39195605 - 39195679
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataa 94  Q
    ||||||||| ||| |||| ||||||||||||||||||| |||||||||||| ||  |||||||||||||||||||    
T  39195605 tgttggattcgtctcgatgaatattttcaaaatattaaattttcataatttttttaaatagataattaaagataa 39195679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 9965498 - 9965613
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    |||||| |||| |||||| |||||| ||| ||| ||||||||||||| |||||||||| |||||  ||||| |||||| | ||||||||||||| || ||    
T  9965498 ataaattatatcatataagatgttgaattcgtctcgataaatatttttaaaatattaaattttcgaaattttttctaaaaaataattaaagatattaaag 9965597  T
Q  100 ataaaaaatatgcatt 115  Q
    ||||||| ||| ||||    
T  9965598 ataaaaattatacatt 9965613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 27976685 - 27976780
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcatt 115  Q
    |||| |||| ||| ||||||||||||| |||||||||| |||||||||||| || ||| ||| |||| |||||| || |||||||| |||||||||    
T  27976685 tgtttgattcgtctcgataaatatttttaaaatattaaattttcataattttttataaaagagaattgaagatattaaagataaaacatatgcatt 27976780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 39194058 - 39193961
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    ||||||||| ||| |||| | |||||| |||||||||| |||||||||||  || ||||||| ||| ||||||| || |||||||| |||||||||||    
T  39194058 tgttggattcgtctcgatgagtatttttaaaatattaaattttcataattgtttttaatagagaatgaaagatattaaagataaaagatatgcattga 39193961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 6234893 - 6234988
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||| |||||||  ||| |||||||||||||| | || |||||||||||  || |||||||||||| |||||| || |||||||||||||||||||    
T  6234893 tgttgtatttgtctagatgaatattttcaaaatgtaaaattttcataattcttt-taatagataatttaagatattaaagataaaaaatatgcattg 6234988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 19170654 - 19170750
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||||||||||| || |  |||| |||| |||||| || |||||||| ||||||||||    
T  19170654 tgttggattcgtctcgatgaatatttttaaaatattaaattttcataattttttttggtagagaattgaagatattaaagataaaatatatgcattg 19170750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 19631454 - 19631358
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| |||  ||| |||||||| |||||||||| |||||||||||| || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  19631454 tgttggattcgtcttgatgaatattttaaaaatattaaattttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattg 19631358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 31486433 - 31486337
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataa-tttattctaatagataattaaagataatatagataaaaaatatgcatt 115  Q
    ||||||||  ||| |||| ||||||||||||||||||| ||||||||| ||| ||| |||||||| ||||||||| || | |||||| |||||||||    
T  31486433 tgttggatccgtctcgatcaatattttcaaaatattaaattttcataatttttttcaaatagatatttaaagatattaaaaataaaagatatgcatt 31486337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 42187094 - 42187190
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||| ||||||| || || |||| |||||||||||  | |||||||| ||||||||||    
T  42187094 tgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattaaagatatcaaagataaaatatatgcattg 42187190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 53816534 - 53816451
Alignment:
Q  26 atttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatat 110  Q
    ||||||| ||||||||||||| |||||||||| |||| ||||||| || |||| |||||||||| ||| || |||||||||||||    
T  53816534 atttgtctcgataaatatttttaaaatattaaatttt-ataattttttttaatggataattaaaaatattaaagataaaaaatat 53816451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 55190829 - 55190925
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| |||  ||| |||||||| |||||||||| |||| ||||||| || |||||||||||| ||||||  | |||||||| ||||||||||    
T  55190829 tgttggattcgtcttgatgaatatttttaaaatattaaatttttataattttttttaatagataattgaagatatcaaagataaaacatatgcattg 55190925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 55291164 - 55291234
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||||||||||||||||| ||||||||||  || |||  ||||||||||||||||||| ||||||||||||    
T  55291164 ataaataatattatataagatgttggattcatctcgacgaatattttcaaaatattaaattttcataattt 55291234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 19433504 - 19433431
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| |||| ||||||||||||||||||| |||| ||||||| || |  ||||||||||||||||    
T  19433504 tgtttgatttgtctcgatgaatattttcaaaatattaaatttttataattttttattttagataattaaagata 19433431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 20651525 - 20651594
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaa 89  Q
    |||| |||||||| ||||||||||||| |||||||||| |||| ||||||| |||| |||||| ||||||    
T  20651525 tgttagatttgtctcgataaatatttttaaaatattaaatttttataattttttctgatagattattaaa 20651594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 19525829 - 19525925
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| |||||||| ||||||||||||||||||||||| || || || | |||| ||||||  | |||||||| ||||||||||    
T  19525829 tgttggaatcgtctcgatgaatatttttaaaatattaagttttcataattttttttagtaaagaattgaagatatcaaagataaaacatatgcattg 19525925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 25644505 - 25644409
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| |||||||| |||||| ||| |||||||||||| || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  25644505 tgttggaatcgtctcgatgaatatttttaaaatagtaaattttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattg 25644409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 25678481 - 25678369
Alignment:
Q  1 ataaataata-ttatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatata 98  Q
    |||||||||| |||||||| |||||||||| |||  | | |||||||||||||| |||| ||||||||||||  |  |||||||||||||||||  || |    
T  25678481 ataaataataattatataagatgttggattcgtctaggtcaatattttcaaaatgttaaattttcataattttattaaatagataattaaagatgttaaa 25678382  T
Q  99 gataaaaaatatg 111  Q
    ||||||| |||||    
T  25678381 gataaaagatatg 25678369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 49768591 - 49768487
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgaca 119  Q
    ||||||||| ||| |||| | |||||| |||||||||| |||| ||||||| || || |||| |||| ||||||  | |||||||| ||||||||||| |    
T  49768591 tgttggattcgtctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgata 49768492  T
Q  120 tgtat 124  Q
    |||||    
T  49768491 tgtat 49768487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 42862227 - 42862168
Alignment:
Q  34 cgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||||||||||| || |||||||||||| |||||||| || ||||||||||    
T  42862227 cgatgaatattttcaaaatataaaattttcataattttttctaatatattattaaagata 42862168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 55014428 - 55014313
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    ||||||||||| |||||| || ||||||| ||| |||| |||||||| |||||||||| |||||||||||| |  ||||| | |||| || |||  | ||    
T  55014428 ataaataatatcatataagatcttggattcgtctcgatgaatatttttaaaatattaaattttcataatttttcttaatacacaattgaatatatcaaag 55014329  T
Q  100 ataaaaaatatgcatt 115  Q
    |||||| |||||||||    
T  55014328 ataaaacatatgcatt 55014313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 143
Target Start/End: Original strand, 1615659 - 1615777
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgacatgtat 124  Q
    |||| ||| |||| |||||||||||||||| || |||||||||||| |||||||| || ||| |||||| |  || | |||  ||||||||||||||  |    
T  1615659 gattcgtctcgatgaatattttcaaaatatcaaattttcataattttttctaatatattattcaagatatttaagctcaaagttatgcattgacatgcgt 1615758  T
Q  125 aagagagttaattgtgtca 143  Q
    || |  |||||||||||||    
T  1615759 aataaggttaattgtgtca 1615777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 6494734 - 6494632
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgaca 119  Q
    ||||||||| ||| |||| | |||||| |||||||||| |||| |||| || || || |||| |||| |||||| || |||||||| ||||||||||| |    
T  6494734 tgttggattcgtctcgatgagtatttttaaaatattaaatttttataaatttttttagtagagaattgaagatattaaagataaaacatatgcattgata 6494635  T
Q  120 tgt 122  Q
    |||    
T  6494634 tgt 6494632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 29424766 - 29424820
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaata 79  Q
    ||||||||||||| | |||||| |||||||||| |||||||||||| ||||||||    
T  29424766 gatttgtcacgatgagtatttttaaaatattaaattttcataattttttctaata 29424820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 53568520 - 53568398
Alignment:
Q  1 ataaataatattatataaa-tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    |||||||||||||| |||| ||||||||| ||| |||| ||||||||  ||||||||| |||||||||  | || || || | |||| ||||||  | ||    
T  53568520 ataaataatattatgtaaaatgttggattcgtctcgatgaatattttttaaatattaaattttcataaaattttttagtaaagaattgaagatatcaaag 53568421  T
Q  100 ataaaaaatatgcattgacatgt 122  Q
    |||||| ||||||||||| ||||    
T  53568420 ataaaacatatgcattgatatgt 53568398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 7738934 - 7739031
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||| ||||||| || || |||| |||| || |||  | |||||||| |||||||||||    
T  7738934 tgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagagaattgaatatatcaaagataaaacatatgcattga 7739031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13203304 - 13203216
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaa 89  Q
    ||||||||||| ||| || |||||||||| |||  ||| |||||||| ||||||| || |||||||||||| |||||||| |||||||||    
T  13203304 ataaataatatcatacaagatgttggattcgtcttgatgaatatttttaaaatatcaaattttcataattt-ttctaataaataattaaa 13203216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 35686523 - 35686596
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| | | |||||||||||||||||||| |||| ||||||| || |  ||||||||||||||||    
T  35686523 tgtttgatttgtctcaacaaatattttcaaaatattaattttttataattttttattttagataattaaagata 35686596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 39786472 - 39786568
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||| ||||||| || || |||| |||| ||||||  | |||||||| |||||||||||    
T  39786472 tgttggattcgtctcgatgaatatttttaaaatattaaatttttataatttttt-tagtagagaattgaagatatcaaagataaaacatatgcattga 39786568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 45064382 - 45064455
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||||||| ||| |||| |||||||| ||||||| || |||||||||||| || || ||||| ||||||||||    
T  45064382 tgttggattcgtctcgattaatatttttaaaatatcaaattttcataattttttttattagattattaaagata 45064455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 50033147 - 50033070
Alignment:
Q  39 aatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    |||||||| |||||||||| |||||||||||| || || |||| |||| ||||||  | |||||||| ||||||||||    
T  50033147 aatatttttaaaatattaaattttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcattg 50033070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 29830459 - 29830559
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgaca 119  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    |||| ||||||||||| ||   || |||| ||||||||||||    
T  29830459 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagaaaattaaagatattaacaatcaaaattatgcattgaca 29830558  T
Q  120 t 120  Q
    |    
T  29830559 t 29830559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 47834087 - 47833991
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgacatg 121  Q
    |||||||| |||| | |||||||||||||| || |||||||||||| || ||||| || ||| |||||| |  || | |||| ||||||||||||||    
T  47834087 gatttgtctcgatgagtattttcaaaatataaaattttcataattttttataatatattattcaagatatttaagctcaaaattatgcattgacatg 47833991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 52818617 - 52818565
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||||||||||||||| |||||||||||| |||||||| || ||| ||||||    
T  52818617 tattttcaaaatattaaattttcataattttttctaatatattattcaagata 52818565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 55997280 - 55997164
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    ||||||||||| || ||| |||||| |||  || |||| |||||||| ||||||| || |||||||||||| || ||||||| |||| ||||||  | ||    
T  55997280 ataaataatatcatgtaagatgttgaattcatctcgatgaatatttttaaaatataaaattttcataattttttttaatagagaattgaagatatcaaag 55997181  T
Q  100 ataaaaaatatgcattg 116  Q
    ||||||  |||||||||    
T  55997180 ataaaacgtatgcattg 55997164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 17610402 - 17610469
Alignment:
Q  26 atttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  17610402 atttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 17610469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 23360306 - 23360361
Alignment:
Q  38 aaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||||||||| |||| ||||||| || |  ||||||||||||||||    
T  23360306 aaatattttcaaaatattaaatttttataattttttattttagataattaaagata 23360361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Original strand, 19731280 - 19731330
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataatt 69  Q
    |||||||||| ||| |||| |||||||| |||||||||| |||||||||||    
T  19731280 atgttggattcgtctcgatgaatatttttaaaatattaaattttcataatt 19731330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 25296726 - 25296676
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  25296726 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 25296676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 26125824 - 26125874
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  26125824 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 26125874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 26170102 - 26170152
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  26170102 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 26170152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 26659985 - 26659935
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    ||||||||| ||| |||| |||||||| |||||||||| ||||||||||||    
T  26659985 tgttggattcgtctcgatgaatatttttaaaatattaaattttcataattt 26659935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 32423194 - 32423294
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgaca 119  Q
    ||||||||| ||| |||| |||||||| ||| |||||| |||||||||| | ||  ||||||||||||||||||  | |||| | ||||||||||||| |    
T  32423194 tgttggattcgtctcgattaatatttttaaa-tattaaattttcataatatttttaaatagataattaaagatatcaaagat-ataaatatgcattgata 32423291  T
Q  120 tgt 122  Q
    |||    
T  32423292 tgt 32423294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 43967839 - 43967889
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  43967839 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 43967889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 44232223 - 44232173
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  44232223 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 44232173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 45291948 - 45291998
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  45291948 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 45291998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 50035666 - 50035588
Alignment:
Q  39 aatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    |||||||| |||||||||| |||||||||||| || || |||| |||| |||||   | |||||||| |||||||||||    
T  50035666 aatatttttaaaatattaaattttcataattttttttagtagagaattgaagatttcaaagataaaacatatgcattga 50035588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 55209720 - 55209670
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  55209720 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 55209670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 9029595 - 9029522
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| ||||||||| |||||||||| |||| ||||||| ||    ||||||||||||||||    
T  9029595 tgtttgatttgtctcgacaaatatttttaaaatattaaatttttataattttttactttagataattaaagata 9029522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 17492782 - 17492855
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||| ||| |||| | |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  17492782 tgttagattcgtctcgatgagtattttcaaaatatcaaattttcataattttttctaatatattattcaagata 17492855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 19533969 - 19533900
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaa 89  Q
    ||||||||||||| |||| |||||||| ||||||| || |||| |||||||  | |||||||| ||||||    
T  19533969 tgttggatttgtctcgatgaatatttttaaaatatcaaatttttataattttctttaatagatcattaaa 19533900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 27982663 - 27982736
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||||||| ||| ||||  | ||||| |||||||||| |||| ||||||| ||||||||||| | ||||||||    
T  27982663 tgttggattcgtctcgatggacatttttaaaatattaaatttttataattttttctaatagattagtaaagata 27982736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 31010330 - 31010403
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| ||||||||  |||||||||| |||| ||||||| || |  ||||||||||||||||    
T  31010330 tgtttgatttgtctcgacaaatatttctaaaatattaaatttttataattttttattttagataattaaagata 31010403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 47386432 - 47386359
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| | |||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  47386432 tgtttgatttgtctcgacatatattttcaaaatattaaatttttataattttttactttagataattaaagata 47386359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 6520555 - 6520623
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||| |||| | |||||||||||||| || ||||||| |||| |||||||| || ||| ||||||    
T  6520555 gatttgtctcgatgagtattttcaaaatatcaaattttcatgattttttctaatatattattcaagata 6520623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 8525343 - 8525291
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  8525343 tattttcaaaatatcaaattttcataattttttctaatatattattcaagata 8525291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 29821186 - 29821238
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  29821186 tattttcaaaatatcaaattttcataattttttctaatatattattcaagata 29821238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 37515482 - 37515388
Alignment:
Q  21 gttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcatt 115  Q
    |||||||| ||| |||| |||||||| |||||||||| |||||||||||| |||||| |||||| |||||||| || ||||||||||||||||||    
T  37515482 gttggattcgtctcgatgaatatttttaaaatattaaattttcataattttttctaaaagataactaaagatattaaagataaaaaatatgcatt 37515388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 23330598 - 23330501
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||||||||| || ||||||| |||| ||||||  | |||||||| |||||||||||    
T  23330598 tgttggatttgtctcgataaatatttttaaaatattaaattttcataattttttttaatagagaattgaagatatgaaagataaaacatatgcattga 23330501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 38681343 - 38681226
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    ||||||||||| |||||| || ||| ||||||| |||| |||||||| |||||||||| |||||||||||| ||| |||||||||||||||||| |  ||    
T  38681343 ataaataatatcatataatatattgaatttgtctcgattaatatttttaaaatattaatttttcataattttttcaaatagataattaaagatattcaag 38681244  T
Q  100 at-aaaaaatatgcattg 116  Q
    || |||||||||||||||    
T  38681243 ataaaaaaatatgcattg 38681226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 26441803 - 26441687
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    ||||||||||| |||||| |||||||| | ||| |||| |||||||| ||||||||||||||||||||||| || ||||||| |||| ||||||  | ||    
T  26441803 ataaataatatcatataagatgttggaatcgtctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaag 26441704  T
Q  100 ataaaaaatatgcattg 116  Q
    |||||| ||||||||||    
T  26441703 ataaaacatatgcattg 26441687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 23435679 - 23435774
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcatt 115  Q
    |||||||||||||  ||| |||||||| |||||||||| |||||||||||| ||  |||||||||||||||||| || ||||||||||||| ||||    
T  23435679 tgttggatttgtcttgattaatatttttaaaatattaaattttcataatttttttaaatagataattaaagatattaaagataaaaaatatacatt 23435774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 32968205 - 32968299
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataa 94  Q
    ||||||||||| |||||| |||||||||||||| |||| ||||||||  ||||||||| |||||||||||| ||  |||||||||||||||||||    
T  32968205 ataaataatatcatataagatgttggatttgtctcgatgaatattttataaatattaaattttcataatttttttaaatagataattaaagataa 32968299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 30005783 - 30005673
Alignment:
Q  1 ataaataatattatataaa----tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataata 96  Q
    ||||||||||| |||||||    ||||||||||||| |||| |||||||| |||||||||| |||||||||||| ||| |||| ||||| ||||||| ||    
T  30005783 ataaataatatcatataaaatgttgttggatttgtctcgattaatatttttaaaatattaaattttcataattttttcaaatacataataaaagatatta 30005684  T
Q  97 tagataaaaaa 107  Q
     ||||||||||    
T  30005683 aagataaaaaa 30005673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 22328108 - 22328034
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataa 94  Q
    ||||| ||| ||| |||| ||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  22328108 tgttgaattcgtctcgatgaatattttcaaaatattaaattttcataattttttctgatagataattaaagataa 22328034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 3898686 - 3898782
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| |||||||| ||||||||||||||||||||||| || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  3898686 tgttggaatcgtctcgatgaatatttttaaaatattaagttttcataattttttttaatagaaaattgaagatatcaaagataaaacatatgcattg 3898782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 16265179 - 16265083
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| |||||||| ||||||||||||||||||||||| || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  16265179 tgttggaatcgtctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaagataaaacatatgcattg 16265083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 50295912 - 50295794
Alignment:
Q  1 ataaataatattatataa-atgttg---gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataata 96  Q
    ||||||||||| |||||| ||||||   |||| ||| |||| |||||||| |||||||||| ||| |||||||| ||| |||||||||||||| ||| ||    
T  50295912 ataaataatatcatataagatgttgttagattcgtctcgattaatatttttaaaatattaaatttccataattttttcaaatagataattaaaaatatta 50295813  T
Q  97 tagataaaaaatatgcatt 115  Q
     |||| |||||||||||||    
T  50295812 cagattaaaaatatgcatt 50295794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 33034125 - 33034226
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataa---tttattctaatagataattaaagataatatagat-aaaaaatatgcat 114  Q
    |||||||||||||  ||||||||||||||| |||||||| |||||||||   ||| |||||| ||||| ||||||||| || |||| |||||||||||||    
T  33034125 atgttggatttgtttcgataaatattttcagaatattaaattttcataatttttttttctaacagatagttaaagatattaaagataaaaaaatatgcat 33034224  T
Q  115 tg 116  Q
    ||    
T  33034225 tg 33034226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 3088891 - 3089008
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    ||||||||| | |||||| ||||| ||||  || ||||||||||||| |||||||| | |||||||||||| ||||||||||||||||||| || || |     
T  3088891 ataaataatgtcatataagatgtttgattcatctcgataaatatttttaaaatattcaattttcataattt-ttctaatagataattaaagctattaaaa 3088989  T
Q  100 at-aaaaaatatgcattga 117  Q
    || ||||||||||||||||    
T  3088990 ataaaaaaatatgcattga 3089008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 51924923 - 51924838
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataa-tttattctaatagataattaaagataatatagataaa 104  Q
    ||||||||| ||| | || ||||||||||||||||||| ||||||||| ||| || ||||||||||||||||||| || |||||||    
T  51924923 tgttggattcgtctcaatgaatattttcaaaatattaaattttcataatttttttgtaatagataattaaagatattaaagataaa 51924838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 24982497 - 24982401
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| |||||||| ||||||||||||||||||||||| || ||||||| |||| ||||||  | | |||||| ||||||||||    
T  24982497 tgttggaatcgtctcgatgaatatttttaaaatattaagttttcataattttttttaatagagaattgaagatatcaaatataaaacatatgcattg 24982401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 32495213 - 32495097
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatag 99  Q
    ||||||||||| ||| || ||||||| || ||||| || |||||||| |||||||||| |||||||||||| || ||| |||  ||| |||||| || ||    
T  32495213 ataaataatatcataaaagatgttgggttcgtcacaatcaatatttttaaaatattaaattttcataattttttataacagaggattgaagatattaaag 32495114  T
Q  100 ataaaaaatatgcattg 116  Q
    || ||||||||||||||    
T  32495113 atgaaaaatatgcattg 32495097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 52163605 - 52163529
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataa-tttattctaatagataattaaagataa 94  Q
    |||||||||| ||| |||| ||| |||| |||||||||| ||||||||| ||| |||||||||||||||||||||||    
T  52163605 atgttggattcgtctcgatgaatgtttttaaaatattaaattttcataatttttttctaatagataattaaagataa 52163529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 16266294 - 16266212
Alignment:
Q  34 cgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    |||| |||||||| |||||||||||||||||||| || || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  16266294 cgatgaatatttttaaaatattaagttttcataaatttttttaatagagaattgaagatatcaaagataaaacatatgcattg 16266212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 43590966 - 43591043
Alignment:
Q  39 aatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    |||||||||||||| | || ||||||||||||  | |||||||||||| |||||| || ||||||||||||||||||||    
T  43590966 aatattttcaaaatctaaaattttcataattttat-taatagataatttaagatattaaagataaaaaatatgcattga 43591043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 31698716 - 31698805
Alignment:
Q  34 cgataaatattttcaaaatattaagttttcataa-tttattctaatagataattaaagataatatagataaaaaatatgcattgacatgt 122  Q
    |||| |||||| |||||||||||| ||||||||| ||| ||| |||||||||||||| ||| || |||| ||| ||||||||||| ||||    
T  31698716 cgattaatattatcaaaatattaaattttcataatttttttcaaatagataattaaatatattaaagattaaatatatgcattgatatgt 31698805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 43680216 - 43680119
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataa-tttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| |||||||| |||||||||||||||||||| ||| || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  43680216 tgttggaatcgtctcgatgaatatttttaaaatattaagttttcataatttttttttaatagagaattgaagatatcaaagataaaacatatgcattg 43680119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 43729882 - 43729813
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaa 89  Q
    ||||||||| ||| || | |||| |||||||||||||| |||||||||||| || |||||||||||||||    
T  43729882 tgttggattcgtctcgctgaatactttcaaaatattaaattttcataattttttataatagataattaaa 43729813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 118
Target Start/End: Complemental strand, 19711824 - 19711740
Alignment:
Q  34 cgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgac 118  Q
    |||||||||||| |||||||||||||||| ||||||| || |  || ||||||||| ||| || |||| |||| |||||||||||    
T  19711824 cgataaatatttacaaaatattaagtttttataattttttattttaaataattaaaaatattaaagattaaaattatgcattgac 19711740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 26345379 - 26345288
Alignment:
Q  1 ataaataatattatataaa-tgttggatttgtcacgataaatattttc--aaaatattaagttttcataatttattctaatagataattaaa 89  Q
    |||||| |||| ||||||| ||||||||||||| |||| |||||||||  ||||||| || |||||||||||| |||||||| || ||||||    
T  26345379 ataaattatatcatataaaatgttggatttgtctcgatgaatattttcaaaaaatatcaaattttcataattttttctaataaattattaaa 26345288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 38737514 - 38737590
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    |||||| || ||||||| |||||||||||| || ||||| | ||||||||||| || | ||||||||||||||||||    
T  38737514 tatttttaatatattaaattttcataattttttttaataaagaattaaagatattaaatataaaaaatatgcattga 38737590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 9202215 - 9202160
Alignment:
Q  39 aatattttcaaaatattaagttttcataa-tttattctaatagataattaaagata 93  Q
    ||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||||||    
T  9202215 aatattttcaagatattaaattttcataatttttttctaatagataattaaagata 9202160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 5111041 - 5111158
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttt-tcataatttattctaatagataattaaagataatata 98  Q
    |||||||||||||||||| |||||| ||| ||| |||| |||| ||| |||||||||| ||  | ||||||| ||| |||||||||||||| ||| || |    
T  5111041 ataaataatattatataagatgttgaattcgtctcgatgaatacttttaaaatattaaattccttataatttgttccaatagataattaaaaatattaaa 5111140  T
Q  99 gataaaaaatatgcattga 117  Q
     || |||||||||||||||    
T  5111141 aat-aaaaatatgcattga 5111158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 31427474 - 31427404
Alignment:
Q  39 aatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaata 109  Q
    |||||||| |||||||||| |||| ||||||| ||||  |||||||||||||| | || ||||||||||||    
T  31427474 aatatttttaaaatattaaatttttataattttttcttgtagataattaaagaaattaaagataaaaaata 31427404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 3138712 - 3138813
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgacatgtat 124  Q
    |||||||| |||| |||||||||||||||| || |||||||||||| ||||| || || ||| |||||| |  || | |||| |||| ||||||||| ||    
T  3138712 gatttgtctcgatgaatattttcaaaatatcaaattttcataattttttctagtatattattcaagatatttaagtttaaaattatgtattgacatgcat 3138811  T
Q  125 aa 126  Q
    ||    
T  3138812 aa 3138813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 9342791 - 9342718
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  9342791 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttagtttagataattaaagata 9342718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3910920 - 3910835
Alignment:
Q  1 ataaataatattatataaa----tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagat 82  Q
    ||||||||||| |||||||    ||||| ||| ||| ||||||||||||| |||||||||| |||| ||||||| || ||||||||    
T  3910920 ataaataatatcatataaaatgttgttgaattcgtctcgataaatatttttaaaatattaaatttttataattttttataatagat 3910835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 4055328 - 4055276
Alignment:
Q  40 atattttcaaaatattaagttttcataatttattctaatagataattaaagat 92  Q
    |||||||||||||||||| | ||||| |||| |||||||| ||||||||||||    
T  4055328 atattttcaaaatattaaatcttcattattttttctaatatataattaaagat 4055276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 16887939 - 16888007
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||  ||||||||||||| |||||||||| |||| ||||||| ||   |||||||||||||||||    
T  16887939 gatttgtgtcgataaatatttttaaaatattaattttttataattttttgctatagataattaaagata 16888007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 23391405 - 23391301
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattct-aatagataattaaagataatatagat-aaaaaatatgcattga 117  Q
    |||||||||  || |||| |||||||||||||| |||| |||||||||||| || | |||||||||  ||| ||| || |||| ||||||||||||||||    
T  23391405 tgttggattcatctcgatgaatattttcaaaattttaaattttcataattttttttaaatagataacaaaatatattaaagataaaaaaatatgcattga 23391306  T
Q  118 catgt 122  Q
     ||||    
T  23391305 tatgt 23391301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 23569789 - 23569885
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| |||  ||| |||||||| |||||||||| |||||||||||| || |  |||| |||| ||||||  | |||||||| ||||||||||    
T  23569789 tgttggattcgtcttgatgaatatttttaaaatattaaattttcataattttttttggtagagaattgaagatatcaaagataaaacatatgcattg 23569885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 27581022 - 27580926
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    |||| |||||||| |||| |||||||| |||||||||| |||| | | ||| |||||||| | ||||||||||| ||  |||| ||||| |||||||    
T  27581022 tgttagatttgtctcgatgaatatttttaaaatattaaatttttacatttttttctaatataaaattaaagatattaatgatacaaaatgtgcattg 27580926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 31971502 - 31971598
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||||||||||| || || |||| | || || |||  | |||||||| ||||||||||    
T  31971502 tgttggattcgtctcgatgaatatttttaaaatattaaattttcataattttttttagtagagagttgaatatatcaaagataaaacatatgcattg 31971598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 38738093 - 38738189
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||||||||||| || || | || |||| || |||  | |||||||| ||||||||||    
T  38738093 tgttggattcgtctcgatgaatatttttaaaatattaaattttcataattttttttacttgagaattgaacatatcaaagataaaacatatgcattg 38738189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 42367437 - 42367369
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  42367437 gatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 42367369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 45265281 - 45265369
Alignment:
Q  34 cgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgacatgt 122  Q
    |||| |||||||||||||||| || |||| ||||||| | |||||| ||||||||||||| || |||| ||| || | ||||| |||||    
T  45265281 cgatgaatattttcaaaatatcaaatttttataatttttgctaatacataattaaagatattaaagatcaaagatgttcattggcatgt 45265369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 50481422 - 50481328
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| |||  ||| |||||||| |||||||||| |||||||||||| || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  50481422 tgttggattcgtctagatgaatatttt-aaaatattaaattttcataattt-ttttaatagagaattgaagatatcaaagataaaacatatgcattg 50481328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 70
Target Start/End: Original strand, 6766484 - 6766535
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    ||||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  6766484 atgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 6766535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 6402556 - 6402506
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  6402556 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 6402506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 11641213 - 11641163
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  11641213 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 11641163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 17306070 - 17306120
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  17306070 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 17306120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 24321377 - 24321427
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  24321377 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 24321427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 30701834 - 30701884
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  30701834 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 30701884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 36399214 - 36399264
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  36399214 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 36399264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 36757632 - 36757582
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  36757632 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 36757582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 40058915 - 40058861
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaata 79  Q
    |||| ||| |||||| |||||||||||||| || |||||||||||| ||||||||    
T  40058915 gattcgtctcgataagtattttcaaaatatcaaattttcataattttttctaata 40058861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 40771918 - 40771868
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  40771918 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 40771868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 42735312 - 42735262
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataatt 69  Q
    ||||| |||||||| ||| |||||||||||||||||||| |||| ||||||    
T  42735312 atgtttgatttgtctcgacaaatattttcaaaatattaaatttttataatt 42735262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 52024142 - 52024192
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  52024142 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 52024192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 116
Target Start/End: Original strand, 16751571 - 16751664
Alignment:
Q  23 tggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    |||||| ||| |||| |||||||| |||||||||| |||||||||||   | ||  ||| |||||||||||  | |||||||| ||||||||||    
T  16751571 tggattcgtctcgatgaatatttttaaaatattaaattttcataattgtgtttagaagagaattaaagatatcaaagataaaacatatgcattg 16751664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 27292761 - 27292806
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  27292761 gatttgtctcgacaaatattttcaaaatattaaatttttataattt 27292806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 31049723 - 31049796
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| |||| |||||||| ||||||| || |||| ||||||| || | ||| |||||||||||||    
T  31049723 tgtttgatttgtctcgatgaatatttttaaaatatcaaatttttataattttttattatatataattaaagata 31049796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 42915306 - 42915253
Alignment:
Q  1 ataaataatattatataaatgttggatttgtcacgataaatattttcaaaatat 54  Q
    |||||||||||||||||||||||  ||||||| |||  |||||||| |||||||    
T  42915306 ataaataatattatataaatgttatatttgtctcgacgaatatttttaaaatat 42915253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 2126784 - 2126836
Alignment:
Q  34 cgataaatattttcaaaatattaagttttcataatttattctaatagataatt 86  Q
    ||||||||||||| ||||||| || |||| ||||||| |||||||| ||||||    
T  2126784 cgataaatatttttaaaatatcaaatttttataattttttctaatatataatt 2126836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 3277613 - 3277546
Alignment:
Q  39 aatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaa 107  Q
    |||||||| ||||||| || |||||||||||| ||||||||||||||| | |||| || |||| |||||    
T  3277613 aatatttttaaaatataaa-ttttcataattttttctaatagataatttatgatattaaagatgaaaaa 3277546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 5117366 - 5117314
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  5117366 tattttcaaaatatcaaattttcataattttttctaatatattattcaagata 5117314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 8250775 - 8250723
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  8250775 tattttcaaaatatcaaattttcataattttttctaatatattattcaagata 8250723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 14075880 - 14075785
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||| ||| ||| |||| |||||||| |||||||||| |||||||||||| || || || |||||| ||||||  | | |||||| ||||||||||    
T  14075880 tgttgaattcgtctcgatgaatatttttaaaatattaaattttcataattt-ttttagtaaataattgaagatatcaaatataaaacatatgcattg 14075785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 31651849 - 31651781
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||| |||| | |||||||||||||| || |||||||||||| || ||||| || ||| ||||||    
T  31651849 gatttgtctcgatgagtattttcaaaatatcaatttttcataattttttataatatattattcaagata 31651781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 38786878 - 38786826
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||| ||||||| || |||||||||||| |||||||| || ||||||||||    
T  38786878 tatttttaaaatatcaatttttcataattttttctaatatattattaaagata 38786826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 44963604 - 44963552
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  44963604 tattttcaaaatatcaaattttcataattttttctaatatattattcaagata 44963552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 49903633 - 49903566
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||| |||| | |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  49903633 gatttgtctcgatgagtattttcaaaatatcaa-ttttcataattttttctaatatattattcaagata 49903566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 2e-20; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 19192772 - 19192870
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattga 117  Q
    |||||||||| ||| |||| ||||||||  ||||||| | |||||||||||| || ||||||||||||||||||| || ||||||||||||| ||||||    
T  19192772 atgttggattcgtctcgattaatattttttaaatatttaattttcataattttttataatagataattaaagatattaaagataaaaaatatacattga 19192870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 5030376 - 5030469
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataa 94  Q
    ||||||||||| |||||| |||||||||| ||| |||| |||||||| |||||||||| |||||||||||| ||  |||||||||||||||||||    
T  5030376 ataaataatatcatataagatgttggattcgtctcgatgaatatttttaaaatattaaattttcataattt-tttaaatagataattaaagataa 5030469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 32775900 - 32775795
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgac 118  Q
    |||||||||| ||| |||| ||||||||||||||||||| ||||  |||||| ||| |||||||||||||| ||| || |||||||||||||  |||||     
T  32775900 atgttggattcgtctcgattaatattttcaaaatattaaatttttgtaattttttcaaatagataattaaa-atattaaagataaaaaatatatattgat 32775802  T
Q  119 atgtata 125  Q
    |||||||    
T  32775801 atgtata 32775795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34883183 - 34883278
Alignment:
Q  1 ataaataatattatataaa----tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagat 92  Q
    ||||||||||||||||||     |||||||||  || |||| ||||||||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  34883183 ataaataatattatataagatattgttggattcttctcgatgaatattttcaaaatattaaattttcataattttttctaatagacaattaaagat 34883278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 22701009 - 22701101
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagat 92  Q
    |||||||||||||||||  ||||||||||||||   |||||||||||  ||||||||| |||||||||||| |||||||||| ||| ||||||    
T  22701009 ataaataatattatatatgatgttggatttgtcttaataaatattttttaaatattaaattttcataattttttctaatagaaaatcaaagat 22701101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 37806874 - 37806970
Alignment:
Q  1 ataaataatattatataaa----tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataa 94  Q
    ||||||||||||||||||     ||||||||||||  |||| ||||||||||||||||||| ||||||||| || || ||||||||||||||||||||    
T  37806874 ataaataatattatataagatattgttggatttgtttcgattaatattttcaaaatattaaattttcataa-ttcttttaatagataattaaagataa 37806970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 89
Target Start/End: Original strand, 41465193 - 41465262
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaa 89  Q
    |||||||||  |||||||||||||||| ||||||| || |||||||||||| ||||||||||| ||||||    
T  41465193 tgttggattcatcacgataaatatttttaaaatataaaattttcataattttttctaatagattattaaa 41465262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 27668050 - 27668147
Alignment:
Q  1 ataaataatattatataaa----tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataa 94  Q
    ||||||||||| |||||||    ||||||||| ||| |||| |||||||| |||||||||| |||||||||||  ||| |||| ||||||||||||||    
T  27668050 ataaataatatcatataaaatgttgttggattcgtctcgattaatatttttaaaatattaaattttcataattctttcaaataaataattaaagataa 27668147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 39418135 - 39418231
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||||||||||| || || ||||||||| ||||||  | |||||||| ||||| ||||    
T  39418135 tgttggattcgtctcgatgaatatttttaaaatattaaattttcataattttttttagtagataattgaagatatcaaagataaaatatatgtattg 39418231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 44283394 - 44283490
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| ||| ||||||||||||| |||||||||| |||| ||||||| || || |||| |||| ||||||  | |||||||| ||||||||||    
T  44283394 tgttggattcgtctcgataaatatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaatatatgcattg 44283490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 4045996 - 4045901
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcatt 115  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||| ||||||| || || |||| |||||||||||  | |||||||| |||||||||    
T  4045996 tgttggattcgtctcgatgaatatttttaaaatattaaatttttataattttttttagtagaaaattaaagatatcaaagataaaacatatgcatt 4045901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 2183107 - 2183033
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||| |||||||| ||| |||||||||||||||||||| |||| ||||||| || |  ||||||||||||||||    
T  2183107 atgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttattttagataattaaagata 2183033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 4083353 - 4083251
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgaca 119  Q
    ||||||||| ||| | || |||||||| |||||||||  |||||||||||| || || || | ||||||||||| || |||||||| ||||||||||| |    
T  4083353 tgttggattcgtctctattaatatttttaaaatattacattttcataattttttttattaaagaattaaagatattaaagataaaacatatgcattgata 4083254  T
Q  120 tgt 122  Q
    |||    
T  4083253 tgt 4083251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 22897043 - 22896959
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaa 105  Q
    |||||||||  || ||||||||||||||||||||||||  ||| ||||||| || ||||| ||||||||||||| || ||||||||    
T  22897043 tgttggattcatctcgataaatattttcaaaatattaatattttataattt-ttttaatatataattaaagatattaaagataaaa 22896959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 32776014 - 32776111
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    |||||||| | ||| |||| |||||||| |||||||||| ||||||||||||||| |  |||| |||| ||||||  | |||||||| ||||||||||    
T  32776014 atgttggactcgtctcgatgaatatttttaaaatattaaattttcataatttatttttgtagagaattgaagatatcaaagataaaacatatgcattg 32776111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 40598275 - 40598178
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataa-tttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||| | ||| |||| |||||||| |||||||||||||||||||| ||| || ||||||| |||| ||||||  | |||||||| ||||||||||    
T  40598275 tgttggaatcgtctcgatgaatatttttaaaatattaagttttcataatttttttttaatagagaattgaagatatcaaagataaaacatatgcattg 40598178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 44365273 - 44365346
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||||||||||| ||    ||||||||||||||||    
T  44365273 tgtttgatttgtctcgacaaatattttcaaaatattaaattttcataattttttactttagataattaaagata 44365346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 23873243 - 23873135
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataa-tttattctaatagataattaaagataatata 98  Q
    |||||||||||||||||  |||||||||| ||| | |||||||||||  ||||||||| |||| |||| ||| |||||||||| ||| ||||||| || |    
T  23873243 ataaataatattatatacgatgttggattcgtctcaataaatattttttaaatattaaatttttataatttttttctaatagaaaatcaaagatattaaa 23873144  T
Q  99 gataaaaaa 107  Q
    || ||||||    
T  23873143 gacaaaaaa 23873135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 41463632 - 41463728
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| ||| || | |||||||| |||||||||| |||||||||||| || || |||| |||| ||||||  | |||||||| ||||||||||    
T  41463632 tgttggattcgtctcggtcaatatttttaaaatattaaattttcataattttttttagtagagaattgaagatatcaaagataaaacatatgcattg 41463728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 39997055 - 39997150
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataat 95  Q
    ||||||||||| || ||| |||||||||| |||  ||| ||||||||||||||||||| |||| ||||||| |||||| |||| | ||||| ||||    
T  39997055 ataaataatatcatttaagatgttggattcgtcttgatgaatattttcaaaatattaaatttttataattttttctaagagattagtaaagttaat 39997150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 18718385 - 18718283
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgaca 119  Q
    ||||||||| ||| |||| | |||||| |||||||||| |||| ||||||| || || |||| |||| ||||||  | |||||||| ||||||||||| |    
T  18718385 tgttggattcgtctcgatgagtatttttaaaatattaaatttttataattttttttagtagagaattgaagatatcaaagataaaacatatgcattgata 18718286  T
Q  120 tgt 122  Q
    |||    
T  18718285 tgt 18718283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 23886836 - 23886762
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataa 94  Q
    ||||||||| |||  |||||||||||| ||||||||||  ||| |||||||  ||||||| ||||||||||||||    
T  23886836 tgttggattcgtcttgataaatatttttaaaatattaatattttataattttctctaatatataattaaagataa 23886762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 33607494 - 33607588
Alignment:
Q  26 atttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgacat 120  Q
    ||||||| ||| |||||||||||||||||||| |||| ||||||| ||    |||||||||||||||| ||  ||| |||| | |||||||||||    
T  33607494 atttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagatattaacgatcaaaattgtgcattgacat 33607588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 6223181 - 6223282
Alignment:
Q  19 atgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgac 118  Q
    ||||| |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    |||| ||||||||||| ||   || |||| |||||||||||    
T  6223181 atgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagaaaattaaagatattaacaatcaaaattatgcattgac 6223280  T
Q  119 at 120  Q
    ||    
T  6223281 at 6223282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 36719470 - 36719397
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  36719470 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 36719397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 13398948 - 13398873
Alignment:
Q  17 aaatgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||||| || |||||||||| ||||||| || |||||| ||||| || ||||| || ||||||||||    
T  13398948 aaatgttggatttgtctcggtaaatatttttaaaatatcaaattttcagaattt-ttttaataaattattaaagata 13398873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 16180284 - 16180377
Alignment:
Q  22 ttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaa-atatgcattg 116  Q
    ||||||||||  |||| ||||||| ||||||||||| |||| ||||||  || ||||||||||||||| ||| ||  |||||||| ||||||||||    
T  16180284 ttggatttgtttcgatgaatatttacaaaatattaaatttttataatt--ttttaatagataattaaatatattaatgataaaaagatatgcattg 16180377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 18504592 - 18504660
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||| |||||| |||||||||||||| || |||||||||||| |||| ||| || ||| ||||||    
T  18504592 gatttgtctcgataagtattttcaaaatatcaaattttcataattttttctcatatattattcaagata 18504660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 25277904 - 25277793
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagtttt-cataatttattctaatagataattaaagataatata 98  Q
    ||||||||||| |||||| || |||||||| |  |||  |||||||| |||||||||| |||| |||||||| ||  |||| ||||||||||||| || |    
T  25277904 ataaataatatcatataagatattggatttttttcgacgaatatttt-aaaatattaaatttttcataatttttttaaataaataattaaagatattaaa 25277806  T
Q  99 gataaaaaatatg 111  Q
    |||||||||||||    
T  25277805 gataaaaaatatg 25277793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 33228588 - 33228532
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattcta 76  Q
    |||| |||||||| |||||||||||||||||||||||| |||| ||  |||||||||    
T  33228588 tgttcgatttgtctcgataaatattttcaaaatattaaatttttattttttattcta 33228532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 38963665 - 38963569
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||| ||| |||| |||||||| |||||||||| |||||||||||| || |  |||| |||| |||| |  | |||||||| ||||||||||    
T  38963665 tgttggattcgtctcgatgaatatttttaaaatattaaattttcataatttttttttgtagagaattgaagaaatcaaagataaaacatatgcattg 38963569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 9877198 - 9877293
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcatt 115  Q
    ||||||||| ||| |||| |||||| | |||||||||| |||| ||||| | || || |||| |||||||||||  | |||||||| |||||||||    
T  9877198 tgttggattcgtctcgatgaatattgttaaaatattaaatttttataatattttttagtagagaattaaagatatcaaagataaaacatatgcatt 9877293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 21271841 - 21271919
Alignment:
Q  39 aatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagat-aaaaaatatgcattga 117  Q
    |||||||||||||| | || ||||||||||||  | |||||||||||| |||||| || |||| ||||||||||||||||    
T  21271841 aatattttcaaaatctaaaattttcataattttat-taatagataatttaagatattaaagataaaaaaatatgcattga 21271919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 38934978 - 38934920
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaata 79  Q
    ||||||||||||  ||||||||||||| ||||||| || |||||||||||| ||||||||    
T  38934978 tgttggatttgtatcgataaatatttttaaaatatcaaattttcataattt-ttctaata 38934920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 332443 - 332373
Alignment:
Q  1 ataaataatattatataa-atgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    ||||||||||| || ||| |||||||||| | | |||| |||||||| |||||||||| ||||||||||||    
T  332443 ataaataatatcatgtaagatgttggattcgcctcgatgaatatttttaaaatattaaattttcataattt 332373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 5405112 - 5405162
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  5405112 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 5405162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 7608165 - 7608215
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  7608165 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 7608215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 8042168 - 8042118
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  8042168 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 8042118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 13125291 - 13125241
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||||||||||||| |||||||||| |||| |||||||    
T  13125291 tgtttgatttgtctcgataaatatttttaaaatattaaatttttataattt 13125241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 19141212 - 19141162
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataattt 70  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| |||||||    
T  19141212 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattt 19141162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 93
Target Start/End: Original strand, 32887037 - 32887095
Alignment:
Q  35 gataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||||||||||||  ||| |||| || || | |||||||||||||||||    
T  32887037 gataaatattttcaaaatattaaacttttataaatttttattatagataattaaagata 32887095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 7799963 - 7800036
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||  |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  7799963 tgtttgatttgtctcggcaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 7800036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 9172292 - 9172219
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||| | ||||||||||||||||||||||||  ||| ||||||| ||    ||||||||||||||||    
T  9172292 tgtttgatttgcctcgataaatattttcaaaatattaaacttttataattttttactttagataattaaagata 9172219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 22839073 - 22839000
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| |||| |||||||||||||||| || |||| ||||||| || | ||  |||||||||||||    
T  22839073 tgtttgatttgtctcgatgaatattttcaaaatatcaaatttttataattttttattatctataattaaagata 22839000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 8924666 - 8924614
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||| ||||||| || |||| ||||||| ||||||||||| ||||||||||    
T  8924666 tatttttaaaatatcaaatttttataattttttctaatagattattaaagata 8924614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 25766561 - 25766621
Alignment:
Q  22 ttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagat 82  Q
    ||||||| ||| |||| |||||||||||||||| || |||| ||||||| |||||| ||||    
T  25766561 ttggattcgtctcgatgaatattttcaaaatatcaaatttttataattttttctaaaagat 25766621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 26436614 - 26436562
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  26436614 tattttcaaaatatcaaattttcataattttttctaatatattattcaagata 26436562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 38963931 - 38963983
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  38963931 tattttcaaaatatcaaattttcataattttttctaatatattattcaagata 38963983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 45036499 - 45036551
Alignment:
Q  41 tattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||||| || |||||||||||| |||||||| || ||| ||||||    
T  45036499 tattttcaaaatatcaaattttcataattttttctaatatattatttaagata 45036551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 145682 - 145756
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataa 94  Q
    ||||||||| ||| |||| ||||||||||||||||||| |||||||||| | ||| |||||||||||||||||||    
T  145682 tgttggattcgtctcgattaatattttcaaaatattaaattttcataatattttcaaatagataattaaagataa 145756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 116
Target Start/End: Original strand, 38477 - 38571
Alignment:
Q  22 ttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||||||||| |||| |||||||| |||||||||| |||||||| ||| || || ||||||||| ||||||  | |||||||| ||||||||||    
T  38477 ttggatttgtctcgatgaatatttttaaaatattaaattttcatagttttttttagtagataattgaagatatcaaagataaaacatatgcattg 38571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 12583 - 12657
Alignment:
Q  42 attttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattg 116  Q
    ||||| |||||||||| |||||||||||| |||||||||| |||| |||||| ||  ||||||| ||||||||||    
T  12583 atttttaaaatattaaattttcataattttttctaatagagaattgaagatattaacgataaaacatatgcattg 12657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 45219 - 45336
Alignment:
Q  1 ataaataatattatataa-atgttg---gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataata 96  Q
    ||||||||||| |||||| ||||||   |||| ||| |||| ||||||||   ||| |||| |||||||||||| |||||||||||||||||||||| ||    
T  45219 ataaataatatcatataacatgttgtaggattcgtctcgatgaatatttttcgaatgttaaattttcataattttttctaatagataattaaagatatta 45318  T
Q  97 tagataaaaaatatgcatt 115  Q
     | || |||||||||||||    
T  45319 aaaat-aaaaatatgcatt 45336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 105
Target Start/End: Complemental strand, 392065 - 391991
Alignment:
Q  34 cgataaatattttcaaaatattaagttttcataatttatt---ctaatagataattaaagataatatagataaaa 105  Q
    |||| ||||||||||||||||||| |||||||||||| ||   |||||||||||||||| ||| || ||||||||    
T  392065 cgatgaatattttcaaaatattaaattttcataattttttttactaatagataattaaatatattaaagataaaa 391991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 25281 - 25219
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataatta 87  Q
    |||| ||| |||| |||||||| |||||||||| |||||||||||| ||| ||||||||||||    
T  25281 gattcgtctcgattaatatttttaaaatattaaattttcataattttttcaaatagataatta 25219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 117467 - 117365
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgaca 119  Q
    ||||| ||| ||| |||| | |||||| |||||||||| |||| ||||||| || || || |||||| |||||| || |||||||| ||||||||||| |    
T  117467 tgttgaattcgtctcgatgagtatttttaaaatattaaatttttataattttttttagtaaataattgaagatattaaagataaaacatatgcattgata 117368  T
Q  120 tgt 122  Q
    |||    
T  117367 tgt 117365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 36446 - 36393
Alignment:
Q  40 atattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    ||||||||||| |||||| |||||||||||| ||| | ||||||||||||||||    
T  36446 atattttcaaactattaaattttcataattttttcaactagataattaaagata 36393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 139
Target Start/End: Complemental strand, 49111 - 48995
Alignment:
Q  22 ttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagataatatagataaaaaatatgcattgacatg 121  Q
    ||||||||||| | |||||||||||  | ||||||| |||| ||||||| || ||||| | |||| || ||| || |||||||| ||||| ||||| ||     
T  49111 ttggatttgtctcaataaatattttttatatattaaatttttataattt-ttttaataaaaaattgaaaatattaaagataaaatatatgaattgatata 49013  T
Q  122 tataagagagttaattgt 139  Q
    ||||| |||||| |||||    
T  49012 tataacagagttgattgt 48995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 100793 - 100720
Alignment:
Q  20 tgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||| |||||||| ||| |||||||||||||||||||| |||| ||||||| ||    ||||||||||||||||    
T  100793 tgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagata 100720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 26342 - 26416
Alignment:
Q  17 aaatgttggatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||||||| ||| |||| |||||||| ||||||  || |||||||||||  || |||||||| ||||||||||    
T  26342 aaatgttggattcgtctcgattaatatttttaaaataccaatttttcataatt--ttttaatagattattaaagata 26416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 189 - 121
Alignment:
Q  25 gatttgtcacgataaatattttcaaaatattaagttttcataatttattctaatagataattaaagata 93  Q
    |||||||| |||| | |||||||||||||| || |||||||||||| | |||||| || ||| ||||||    
T  189 gatttgtctcgatgagtattttcaaaatatcaaattttcataatttttcctaatatattattcaagata 121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 2230 - 2286
Alignment:
Q  39 aatattttcaaaatattaagttttcataatttat-tctaatagataattaaagataa 94  Q
    ||||||||  ||||||||| |||||||||||| | | ||||||||||||||||||||    
T  2230 aatatttttcaaatattaaattttcataatttttctataatagataattaaagataa 2286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University