View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19234_low_3 (Length: 492)

Name: NF19234_low_3
Description: NF19234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19234_low_3
NF19234_low_3
[»] chr6 (39 HSPs)
chr6 (2-388)||(23267898-23268281)
chr6 (389-492)||(14393632-14393735)
chr6 (389-492)||(15546700-15546803)
chr6 (389-492)||(21379941-21380044)
chr6 (389-492)||(8091130-8091233)
chr6 (389-492)||(885453-885556)
chr6 (389-492)||(4890480-4890583)
chr6 (389-492)||(13439764-13439867)
chr6 (390-492)||(7808677-7808779)
chr6 (387-491)||(18998115-18998218)
chr6 (389-491)||(11687143-11687245)
chr6 (398-490)||(3369055-3369147)
chr6 (393-488)||(29609073-29609168)
chr6 (394-492)||(4238922-4239020)
chr6 (389-492)||(13172574-13172676)
chr6 (387-492)||(20501774-20501878)
chr6 (389-486)||(17279601-17279695)
chr6 (387-490)||(17367062-17367158)
chr6 (389-442)||(21380059-21380112)
chr6 (420-492)||(31764356-31764428)
chr6 (411-466)||(6433751-6433806)
chr6 (388-442)||(11687261-11687315)
chr6 (389-442)||(885385-885438)
chr6 (389-442)||(4890599-4890652)
chr6 (389-446)||(6433690-6433747)
chr6 (387-442)||(3368983-3369038)
chr6 (388-442)||(20501705-20501759)
chr6 (390-442)||(8091063-8091115)
chr6 (389-442)||(13439695-13439748)
chr6 (389-442)||(15546632-15546685)
chr6 (390-442)||(7808610-7808662)
chr6 (391-442)||(18998235-18998286)
chr6 (416-489)||(7187633-7187706)
chr6 (393-442)||(29609005-29609054)
chr6 (402-442)||(14393574-14393614)
chr6 (426-490)||(30905046-30905110)
chr6 (411-490)||(2599078-2599156)
chr6 (393-442)||(31764443-31764492)
chr6 (389-419)||(5416655-5416685)
[»] chr7 (65 HSPs)
chr7 (388-492)||(24836088-24836192)
chr7 (387-492)||(20184236-20184341)
chr7 (388-490)||(31231613-31231715)
chr7 (389-492)||(34052347-34052450)
chr7 (389-492)||(35339278-35339381)
chr7 (392-492)||(30594761-30594861)
chr7 (393-492)||(30259070-30259169)
chr7 (389-492)||(3953042-3953145)
chr7 (387-489)||(10936468-10936570)
chr7 (387-492)||(38883289-38883394)
chr7 (388-492)||(45997507-45997611)
chr7 (389-492)||(39617841-39617944)
chr7 (389-491)||(40358184-40358289)
chr7 (388-492)||(9285713-9285817)
chr7 (388-492)||(9289780-9289884)
chr7 (390-490)||(39143713-39143813)
chr7 (389-492)||(12142261-12142364)
chr7 (391-492)||(37093836-37093937)
chr7 (388-492)||(24123754-24123858)
chr7 (389-492)||(25742435-25742534)
chr7 (402-492)||(31521538-31521628)
chr7 (389-492)||(48103436-48103536)
chr7 (393-489)||(10398390-10398486)
chr7 (393-492)||(29277905-29278004)
chr7 (389-490)||(47237433-47237526)
chr7 (389-442)||(10936588-10936641)
chr7 (389-442)||(31231734-31231787)
chr7 (389-462)||(35665633-35665706)
chr7 (389-442)||(38528530-38528583)
chr7 (389-441)||(33721827-33721879)
chr7 (420-491)||(33749713-33749784)
chr7 (388-442)||(34052278-34052332)
chr7 (385-442)||(35665734-35665791)
chr7 (389-442)||(38883221-38883274)
chr7 (384-442)||(12142187-12142245)
chr7 (389-442)||(24836020-24836073)
chr7 (404-492)||(16876470-16876559)
chr7 (389-442)||(20184357-20184410)
chr7 (389-442)||(30259184-30259237)
chr7 (389-442)||(30594693-30594746)
chr7 (389-442)||(47237546-47237599)
chr7 (389-440)||(39143826-39143877)
chr7 (388-434)||(17101700-17101746)
chr7 (388-442)||(29277837-29277891)
chr7 (389-434)||(17101654-17101699)
chr7 (402-491)||(38989084-38989173)
chr7 (389-442)||(48103368-48103421)
chr7 (386-442)||(3953160-3953216)
chr7 (391-442)||(35339396-35339447)
chr7 (443-490)||(38528464-38528511)
chr7 (430-485)||(44148722-44148777)
chr7 (388-442)||(39617960-39618013)
chr7 (389-442)||(9285832-9285885)
chr7 (389-442)||(9289899-9289952)
chr7 (403-489)||(22723240-22723328)
chr7 (390-437)||(11486865-11486912)
chr7 (447-489)||(1402990-1403032)
chr7 (447-489)||(25572883-25572925)
chr7 (389-442)||(25742549-25742602)
chr7 (393-442)||(38528394-38528443)
chr7 (389-442)||(45997626-45997679)
chr7 (419-490)||(35007103-35007173)
chr7 (436-490)||(1072302-1072358)
chr7 (426-483)||(21581183-21581240)
chr7 (389-442)||(37093768-37093821)
[»] chr8 (46 HSPs)
chr8 (391-492)||(40891081-40891182)
chr8 (389-492)||(17426628-17426731)
chr8 (389-492)||(15882269-15882372)
chr8 (389-492)||(38629542-38629645)
chr8 (389-492)||(38520086-38520189)
chr8 (393-490)||(24741827-24741924)
chr8 (387-492)||(29780957-29781062)
chr8 (389-490)||(23940804-23940905)
chr8 (387-491)||(33100643-33100747)
chr8 (402-490)||(4261989-4262077)
chr8 (389-492)||(12234534-12234638)
chr8 (389-492)||(8210391-8210494)
chr8 (389-491)||(24211278-24211380)
chr8 (405-491)||(11828612-11828698)
chr8 (393-487)||(35467243-35467337)
chr8 (391-492)||(37114306-37114407)
chr8 (393-490)||(14834676-14834770)
chr8 (387-479)||(38515585-38515677)
chr8 (389-492)||(40393791-40393893)
chr8 (393-492)||(38405207-38405305)
chr8 (389-443)||(8210323-8210377)
chr8 (389-442)||(15882200-15882253)
chr8 (388-437)||(24211401-24211450)
chr8 (393-489)||(33390717-33390813)
chr8 (390-442)||(37114239-37114291)
chr8 (389-442)||(17426748-17426801)
chr8 (389-442)||(23940923-23940976)
chr8 (389-442)||(29781077-29781130)
chr8 (389-442)||(4035741-4035794)
chr8 (389-442)||(12234466-12234519)
chr8 (389-442)||(38520018-38520071)
chr8 (397-486)||(9775206-9775297)
chr8 (390-442)||(33100763-33100815)
chr8 (439-490)||(25264277-25264328)
chr8 (389-442)||(11828721-11828774)
chr8 (426-489)||(7959857-7959920)
chr8 (393-455)||(33940713-33940774)
chr8 (389-442)||(38629474-38629527)
chr8 (387-419)||(4036570-4036602)
chr8 (387-442)||(24741941-24741996)
chr8 (419-473)||(5356153-5356207)
chr8 (393-442)||(35467175-35467224)
chr8 (390-442)||(5356242-5356294)
chr8 (449-489)||(10778728-10778768)
chr8 (391-423)||(26261502-26261534)
chr8 (457-489)||(29869941-29869973)
[»] chr4 (60 HSPs)
chr4 (384-492)||(24915789-24915897)
chr4 (389-492)||(42274492-42274595)
chr4 (389-492)||(530669-530772)
chr4 (389-492)||(1298980-1299083)
chr4 (389-492)||(18417725-18417828)
chr4 (390-492)||(32318721-32318823)
chr4 (391-492)||(24969543-24969644)
chr4 (389-491)||(21048705-21048807)
chr4 (387-492)||(27434678-27434783)
chr4 (389-492)||(13204445-13204548)
chr4 (389-492)||(55107592-55107695)
chr4 (387-492)||(20435138-20435243)
chr4 (388-492)||(55049399-55049503)
chr4 (389-492)||(4552853-4552956)
chr4 (389-492)||(23928568-23928670)
chr4 (390-492)||(4688248-4688350)
chr4 (389-491)||(35360745-35360846)
chr4 (389-492)||(28809846-28809950)
chr4 (393-488)||(9355557-9355652)
chr4 (394-491)||(24294536-24294636)
chr4 (401-492)||(2272434-2272525)
chr4 (389-483)||(3422429-3422523)
chr4 (389-462)||(43486200-43486273)
chr4 (416-489)||(56552132-56552205)
chr4 (387-491)||(16995553-16995656)
chr4 (420-490)||(4895042-4895113)
chr4 (391-490)||(36030941-36031031)
chr4 (388-442)||(530787-530841)
chr4 (389-442)||(52824239-52824292)
chr4 (390-442)||(18417658-18417710)
chr4 (388-442)||(24969662-24969716)
chr4 (389-442)||(1298912-1298965)
chr4 (389-442)||(20435258-20435311)
chr4 (390-442)||(42274611-42274663)
chr4 (393-489)||(47452814-47452910)
chr4 (387-442)||(55107522-55107577)
chr4 (387-442)||(23928685-23928740)
chr4 (391-442)||(37525061-37525112)
chr4 (389-442)||(4552785-4552838)
chr4 (387-436)||(28573945-28573994)
chr4 (390-442)||(4688366-4688418)
chr4 (389-440)||(28809967-28810018)
chr4 (393-442)||(3422547-3422596)
chr4 (389-442)||(13204377-13204430)
chr4 (389-442)||(27434610-27434663)
chr4 (388-488)||(19600939-19601039)
chr4 (389-443)||(52587430-52587481)
chr4 (456-491)||(52587382-52587417)
chr4 (452-491)||(52824308-52824347)
chr4 (392-442)||(56552064-56552114)
chr4 (408-477)||(2990573-2990642)
chr4 (389-462)||(11330106-11330179)
chr4 (393-442)||(47465102-47465151)
chr4 (388-442)||(2272366-2272420)
chr4 (389-442)||(24915917-24915969)
chr4 (389-442)||(32318838-32318891)
chr4 (389-442)||(35360677-35360729)
chr4 (393-442)||(42020208-42020257)
chr4 (412-477)||(42906861-42906926)
chr4 (393-441)||(16995673-16995721)
[»] chr3 (95 HSPs)
chr3 (389-492)||(21969157-21969260)
chr3 (389-492)||(21991593-21991696)
chr3 (387-492)||(13078161-13078266)
chr3 (389-492)||(3970491-3970594)
chr3 (389-492)||(4072273-4072376)
chr3 (389-492)||(25446318-25446420)
chr3 (389-492)||(45487867-45487970)
chr3 (389-492)||(50099502-50099605)
chr3 (387-492)||(22101233-22101338)
chr3 (390-492)||(8831809-8831911)
chr3 (389-492)||(22176177-22176280)
chr3 (389-492)||(26906522-26906625)
chr3 (389-492)||(36278756-36278859)
chr3 (390-492)||(10254637-10254739)
chr3 (391-492)||(12838145-12838246)
chr3 (387-492)||(25488339-25488444)
chr3 (391-492)||(32237396-32237497)
chr3 (389-492)||(25561079-25561182)
chr3 (389-492)||(35368801-35368904)
chr3 (389-492)||(36822760-36822863)
chr3 (389-492)||(43639081-43639184)
chr3 (389-491)||(36657433-36657535)
chr3 (389-492)||(12789674-12789777)
chr3 (390-492)||(13723989-13724090)
chr3 (387-492)||(45712901-45713006)
chr3 (389-492)||(39850344-39850448)
chr3 (393-488)||(1476555-1476650)
chr3 (389-492)||(10117584-10117682)
chr3 (389-492)||(10441258-10441361)
chr3 (389-492)||(55340293-55340396)
chr3 (389-491)||(44611382-44611483)
chr3 (391-492)||(404113-404213)
chr3 (389-492)||(46679329-46679432)
chr3 (390-492)||(10017182-10017279)
chr3 (389-483)||(26976842-26976936)
chr3 (389-483)||(26977767-26977861)
chr3 (393-488)||(42105387-42105482)
chr3 (389-492)||(43150548-43150649)
chr3 (393-490)||(297541-297638)
chr3 (393-492)||(5529960-5530059)
chr3 (389-442)||(21969275-21969328)
chr3 (389-442)||(21991711-21991764)
chr3 (403-492)||(44920661-44920749)
chr3 (389-442)||(45487799-45487852)
chr3 (393-490)||(49984001-49984098)
chr3 (390-490)||(156978-157069)
chr3 (393-485)||(46222032-46222124)
chr3 (389-492)||(36329188-36329283)
chr3 (389-442)||(4072392-4072445)
chr3 (389-442)||(12789606-12789659)
chr3 (389-442)||(25488459-25488512)
chr3 (389-442)||(25561011-25561064)
chr3 (389-442)||(26906454-26906507)
chr3 (389-442)||(32237512-32237565)
chr3 (389-442)||(35368549-35368602)
chr3 (389-442)||(36278874-36278927)
chr3 (389-442)||(36657551-36657604)
chr3 (389-442)||(39850463-39850516)
chr3 (390-442)||(5529892-5529944)
chr3 (390-442)||(10017115-10017167)
chr3 (390-442)||(10254569-10254621)
chr3 (394-490)||(46664246-46664342)
chr3 (391-442)||(43639200-43639251)
chr3 (392-442)||(45713021-45713071)
chr3 (393-442)||(1476669-1476718)
chr3 (389-442)||(3970609-3970662)
chr3 (393-442)||(8831744-8831793)
chr3 (389-442)||(10441376-10441429)
chr3 (389-442)||(36822878-36822931)
chr3 (389-442)||(38125297-38125350)
chr3 (390-442)||(10117516-10117568)
chr3 (392-488)||(37506130-37506225)
chr3 (391-442)||(12838079-12838130)
chr3 (388-442)||(13078281-13078335)
chr3 (419-489)||(37536941-37537011)
chr3 (388-442)||(43150479-43150533)
chr3 (427-488)||(39677312-39677373)
chr3 (387-442)||(26976960-26977015)
chr3 (387-442)||(55340412-55340467)
chr3 (388-442)||(32362860-32362914)
chr3 (389-442)||(404044-404097)
chr3 (389-442)||(25446251-25446302)
chr3 (389-442)||(36329298-36329351)
chr3 (419-491)||(4567250-4567322)
chr3 (426-492)||(32363122-32363188)
chr3 (396-442)||(44611499-44611545)
chr3 (393-442)||(37506244-37506293)
chr3 (389-442)||(46664176-46664229)
chr3 (389-430)||(46679289-46679330)
chr3 (393-489)||(19953917-19954012)
chr3 (387-442)||(42105501-42105556)
chr3 (388-442)||(50099431-50099485)
chr3 (389-442)||(157087-157140)
chr3 (389-442)||(13724106-13724159)
chr3 (387-435)||(54126648-54126696)
[»] chr1 (79 HSPs)
chr1 (389-492)||(27240924-27241027)
chr1 (389-492)||(19954911-19955014)
chr1 (389-492)||(47940570-47940673)
chr1 (389-490)||(40647188-40647289)
chr1 (391-492)||(5189537-5189638)
chr1 (387-492)||(9978049-9978154)
chr1 (391-492)||(14387017-14387118)
chr1 (389-492)||(2854532-2854635)
chr1 (389-492)||(23698502-23698605)
chr1 (389-492)||(42561295-42561398)
chr1 (389-492)||(48954214-48954317)
chr1 (389-491)||(51789597-51789699)
chr1 (391-492)||(15324695-15324796)
chr1 (389-492)||(26208493-26208596)
chr1 (390-492)||(3607730-3607832)
chr1 (389-487)||(36880584-36880682)
chr1 (387-492)||(27926249-27926353)
chr1 (389-492)||(50627199-50627302)
chr1 (393-491)||(957658-957756)
chr1 (390-492)||(1387846-1387948)
chr1 (390-492)||(19796982-19797084)
chr1 (418-492)||(6079452-6079526)
chr1 (389-490)||(51276695-51276796)
chr1 (388-492)||(50856320-50856424)
chr1 (388-490)||(27670213-27670316)
chr1 (393-492)||(27928302-27928400)
chr1 (393-492)||(49284298-49284397)
chr1 (389-492)||(50162538-50162641)
chr1 (411-492)||(4299414-4299495)
chr1 (388-491)||(2125069-2125172)
chr1 (389-492)||(21930449-21930549)
chr1 (411-491)||(48645036-48645116)
chr1 (393-492)||(22338988-22339087)
chr1 (388-489)||(36007819-36007920)
chr1 (389-442)||(5189469-5189522)
chr1 (389-442)||(19797099-19797152)
chr1 (389-442)||(49285093-49285146)
chr1 (390-442)||(9978170-9978222)
chr1 (389-456)||(362461-362528)
chr1 (387-442)||(23698620-23698675)
chr1 (387-442)||(27926370-27926425)
chr1 (393-492)||(16518302-16518403)
chr1 (387-441)||(25297966-25298020)
chr1 (389-442)||(2854650-2854703)
chr1 (389-442)||(3607847-3607900)
chr1 (389-442)||(4299513-4299566)
chr1 (389-442)||(15324626-15324679)
chr1 (433-490)||(29598393-29598450)
chr1 (389-442)||(42561413-42561466)
chr1 (389-442)||(47940689-47940742)
chr1 (389-442)||(48954332-48954385)
chr1 (389-442)||(50627131-50627184)
chr1 (390-442)||(14387133-14387185)
chr1 (391-442)||(50162657-50162708)
chr1 (388-442)||(27928416-27928470)
chr1 (389-447)||(29598450-29598508)
chr1 (389-442)||(19955029-19955082)
chr1 (389-442)||(27241042-27241095)
chr1 (403-492)||(35547714-35547803)
chr1 (389-442)||(51789713-51789766)
chr1 (430-482)||(2302481-2302533)
chr1 (390-442)||(51276813-51276865)
chr1 (388-442)||(40647115-40647169)
chr1 (389-442)||(2125188-2125241)
chr1 (446-491)||(9895322-9895367)
chr1 (393-492)||(28244026-28244119)
chr1 (421-489)||(39015225-39015293)
chr1 (381-442)||(21930372-21930433)
chr1 (393-442)||(22339102-22339151)
chr1 (388-436)||(25297921-25297968)
chr1 (420-492)||(28431733-28431805)
chr1 (387-442)||(6079382-6079437)
chr1 (389-442)||(1387780-1387831)
chr1 (397-491)||(5059568-5059664)
chr1 (389-442)||(9895253-9895306)
chr1 (389-442)||(36880289-36880342)
chr1 (449-489)||(18651310-18651350)
chr1 (415-492)||(48958233-48958309)
chr1 (393-437)||(16518424-16518468)
[»] scaffold0122 (2 HSPs)
scaffold0122 (387-492)||(45902-46007)
scaffold0122 (389-442)||(45834-45887)
[»] chr2 (58 HSPs)
chr2 (387-492)||(45408693-45408798)
chr2 (389-492)||(1923980-1924083)
chr2 (389-492)||(24101832-24101935)
chr2 (388-492)||(2818734-2818838)
chr2 (389-492)||(7737133-7737236)
chr2 (389-492)||(27920640-27920743)
chr2 (389-492)||(34490524-34490627)
chr2 (388-492)||(9281346-9281450)
chr2 (389-492)||(3116944-3117047)
chr2 (389-492)||(43476014-43476117)
chr2 (387-492)||(16705801-16705906)
chr2 (388-492)||(12850541-12850645)
chr2 (389-492)||(6605803-6605905)
chr2 (389-492)||(22269790-22269893)
chr2 (389-492)||(42713777-42713880)
chr2 (389-491)||(9933570-9933671)
chr2 (391-492)||(34455953-34456054)
chr2 (412-491)||(9850781-9850860)
chr2 (389-492)||(20892953-20893055)
chr2 (389-492)||(29229361-29229467)
chr2 (389-492)||(29342661-29342767)
chr2 (419-492)||(23835945-23836018)
chr2 (396-492)||(7116438-7116534)
chr2 (390-455)||(10552986-10553051)
chr2 (395-490)||(40362553-40362647)
chr2 (389-442)||(16705733-16705786)
chr2 (45-159)||(32180412-32180534)
chr2 (387-442)||(24101950-24102005)
chr2 (387-442)||(34455883-34455938)
chr2 (389-442)||(1924099-1924152)
chr2 (389-442)||(9281465-9281518)
chr2 (389-442)||(20892884-20892937)
chr2 (389-442)||(23835876-23835929)
chr2 (389-446)||(43858548-43858605)
chr2 (389-442)||(3116876-3116929)
chr2 (389-442)||(9933687-9933740)
chr2 (389-442)||(34490456-34490509)
chr2 (389-442)||(45408625-45408678)
chr2 (394-442)||(2818671-2818719)
chr2 (387-442)||(12850660-12850715)
chr2 (403-490)||(17500020-17500107)
chr2 (387-442)||(22269720-22269775)
chr2 (403-492)||(39242997-39243086)
chr2 (390-442)||(7737065-7737117)
chr2 (387-441)||(8111692-8111746)
chr2 (389-442)||(27920573-27920625)
chr2 (389-442)||(42713896-42713949)
chr2 (389-428)||(6605738-6605777)
chr2 (387-442)||(7116368-7116423)
chr2 (387-442)||(29229482-29229536)
chr2 (387-442)||(29342782-29342836)
chr2 (420-462)||(17434728-17434770)
chr2 (393-490)||(25095801-25095898)
chr2 (387-486)||(1699853-1699952)
chr2 (390-442)||(9850875-9850923)
chr2 (391-442)||(43475946-43475997)
chr2 (401-443)||(17434798-17434840)
chr2 (464-492)||(17434755-17434783)
[»] chr5 (62 HSPs)
chr5 (389-491)||(20476500-20476602)
chr5 (389-492)||(33629345-33629448)
chr5 (384-492)||(1138627-1138735)
chr5 (387-491)||(16473024-16473128)
chr5 (388-491)||(15855912-15856015)
chr5 (389-491)||(35420612-35420714)
chr5 (392-492)||(12744894-12744994)
chr5 (389-492)||(4266050-4266153)
chr5 (388-491)||(32623214-32623317)
chr5 (389-491)||(13754291-13754393)
chr5 (388-476)||(21591212-21591300)
chr5 (388-476)||(21595329-21595417)
chr5 (392-491)||(12807980-12808079)
chr5 (389-492)||(21259730-21259833)
chr5 (389-492)||(43539175-43539278)
chr5 (389-489)||(37552308-37552408)
chr5 (403-492)||(21262011-21262100)
chr5 (393-492)||(19976330-19976429)
chr5 (389-490)||(780794-780895)
chr5 (388-492)||(1456022-1456125)
chr5 (425-492)||(24397282-24397348)
chr5 (401-475)||(2529066-2529140)
chr5 (419-489)||(37655182-37655252)
chr5 (387-462)||(2268703-2268778)
chr5 (391-442)||(24397364-24397415)
chr5 (389-442)||(15855843-15855896)
chr5 (389-442)||(35420730-35420783)
chr5 (389-442)||(1138559-1138612)
chr5 (389-442)||(4265982-4266035)
chr5 (393-442)||(8364748-8364797)
chr5 (393-442)||(16472959-16473008)
chr5 (393-490)||(35807005-35807102)
chr5 (420-492)||(18236536-18236608)
chr5 (387-442)||(1164914-1164969)
chr5 (391-442)||(2255580-2255631)
chr5 (393-491)||(35276295-35276394)
chr5 (393-455)||(10132359-10132421)
chr5 (427-488)||(8364668-8364729)
chr5 (389-442)||(20476431-20476484)
chr5 (389-442)||(21259848-21259901)
chr5 (393-437)||(780915-780959)
chr5 (391-482)||(1384331-1384421)
chr5 (387-442)||(13754409-13754464)
chr5 (389-432)||(17583367-17583410)
chr5 (393-451)||(4913258-4913316)
chr5 (411-492)||(5144495-5144576)
chr5 (392-441)||(25751570-25751619)
chr5 (389-442)||(33629465-33629518)
chr5 (389-437)||(29141805-29141853)
chr5 (388-442)||(2268171-2268225)
chr5 (404-442)||(20464014-20464052)
chr5 (407-473)||(28056179-28056245)
chr5 (393-442)||(35806939-35806988)
chr5 (393-437)||(29141863-29141907)
chr5 (451-490)||(735346-735385)
chr5 (448-486)||(34513477-34513515)
chr5 (389-442)||(12807912-12807964)
chr5 (393-442)||(18236470-18236519)
chr5 (449-489)||(2538467-2538507)
chr5 (409-441)||(10499947-10499979)
chr5 (420-476)||(10500161-10500217)
chr5 (457-489)||(12257582-12257614)
[»] scaffold0188 (2 HSPs)
scaffold0188 (389-492)||(7154-7257)
scaffold0188 (389-442)||(7086-7139)
[»] scaffold0086 (1 HSPs)
scaffold0086 (390-492)||(48194-48296)
[»] scaffold0107 (2 HSPs)
scaffold0107 (389-492)||(51131-51234)
scaffold0107 (389-442)||(51063-51116)
[»] scaffold0163 (2 HSPs)
scaffold0163 (389-491)||(1939-2041)
scaffold0163 (389-442)||(2058-2111)
[»] scaffold0653 (2 HSPs)
scaffold0653 (388-492)||(3392-3496)
scaffold0653 (389-442)||(3511-3564)
[»] scaffold0118 (2 HSPs)
scaffold0118 (390-492)||(14510-14612)
scaffold0118 (389-442)||(14442-14495)
[»] scaffold0137 (2 HSPs)
scaffold0137 (384-492)||(10183-10291)
scaffold0137 (391-442)||(10118-10169)
[»] scaffold0595 (2 HSPs)
scaffold0595 (389-468)||(5797-5878)
scaffold0595 (389-442)||(5701-5754)
[»] scaffold0018 (1 HSPs)
scaffold0018 (399-492)||(138287-138380)
[»] scaffold0013 (1 HSPs)
scaffold0013 (426-492)||(94240-94306)
[»] scaffold0069 (2 HSPs)
scaffold0069 (389-442)||(26405-26458)
scaffold0069 (389-418)||(26463-26492)
[»] scaffold0006 (2 HSPs)
scaffold0006 (388-460)||(72287-72359)
scaffold0006 (389-442)||(72389-72441)
[»] scaffold0049 (1 HSPs)
scaffold0049 (14-55)||(68582-68623)
[»] scaffold0004 (1 HSPs)
scaffold0004 (426-458)||(90738-90770)


Alignment Details
Target: chr6 (Bit Score: 277; Significance: 1e-155; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 2 - 388
Target Start/End: Complemental strand, 23268281 - 23267898
Alignment:
Q  2 ttcaccctgtagtttggtattctttctttaccgtcacaaccccatcttacctctttgctcgcaaatcttattttttcatatcagagaattcatgatttct 101  Q
    |||||||||  | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23268281 ttcaccctgccgcttggtattctttctttaccgtcacacccccatcttacctctttgctcgcaaatcttatttttccatatcagagaattcatgatttct 23268182  T
Q  102 accatttgattttttgaacaaaggatgagttgttatttgccaattattgtaaaagaattgttttgtaaatttttgatgctgcaaaatttccaatctcatc 201  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  23268181 accatttgaattttggaacaaaggatgagttgttatttgccaattattgtaaaagaattgttctgtaaatttttgatgctgcaaaattcccaatctcatc 23268082  T
Q  202 cataacttgatgtctttatattttacagcatctgaacaaatatggagtaatttaggttattagcatttaagttattttcaatcaacgattatagcttatt 301  Q
    |||||||||||||||||||||||| |||||||||||||||||     ||||||| || |||| |||||||||||||||||||||||||||||||||||||    
T  23268081 cataacttgatgtctttatattttgcagcatctgaacaaata-----taatttaagtcattaacatttaagttattttcaatcaacgattatagcttatt 23267987  T
Q  302 tttaaggagttaattgctttttnnnnnnnttaagacatcaataattgtcac--gagttatctcttttgaaaaatatgtacgtcgaagat 388  Q
    ||||||||||||||||||||||       ||||||||||||||||||||||  ||||||||||||||||||||||||| ||||| ||||    
T  23267986 tttaaggagttaattgctttttaaaaaaattaagacatcaataattgtcacatgagttatctcttttgaaaaatatgttcgtcggagat 23267898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 14393735 - 14393632
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14393735 ggagaaaacttaggtataattccttaggtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 14393636  T
Q  489 atcc 492  Q
    ||||    
T  14393635 atcc 14393632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 15546803 - 15546700
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15546803 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaatttaccatgatttcctcaaatccataattttctcaaagtttgttat 15546704  T
Q  489 atcc 492  Q
    ||||    
T  15546703 atcc 15546700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 21379941 - 21380044
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  21379941 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaatgtttgttat 21380040  T
Q  489 atcc 492  Q
    ||||    
T  21380041 atcc 21380044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 8091233 - 8091130
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  8091233 ggagaaaacttaggtacaattgcttaggtgcttttcgtatggttcttaactaaattcaccgtgatttccttaaatccataattttctcaaagtttgttat 8091134  T
Q  489 atcc 492  Q
    ||||    
T  8091133 atcc 8091130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 885556 - 885453
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  885556 ggagaaaacttaggtacaattccttaggtgcttttcctatgattcttaactaaattcatcatgattttctcaaatccataattttctcaaagtttgttat 885457  T
Q  489 atcc 492  Q
    ||||    
T  885456 atcc 885453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 4890480 - 4890583
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  4890480 ggagaaaacttaggtacaatttcttaggtgtttttcgtatggttcttaactaaatttaccatgatttcctcaaattcataattttctcaaagtttgttat 4890579  T
Q  489 atcc 492  Q
    ||||    
T  4890580 atcc 4890583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 13439867 - 13439764
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||| |  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13439867 ggagaaaacttaggtacaattacgcaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 13439768  T
Q  489 atcc 492  Q
    ||||    
T  13439767 atcc 13439764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 390 - 492
Target Start/End: Complemental strand, 7808779 - 7808677
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| ||||||||||||||||||||||||    
T  7808779 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaataccatgatttcctcaaatctataattttctcaaagtttgttata 7808680  T
Q  490 tcc 492  Q
    |||    
T  7808679 tcc 7808677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 387 - 491
Target Start/End: Original strand, 18998115 - 18998218
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    |||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18998115 atggagaaaacttaggtacaattccttaggtgtttttcgtacg-ttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgtt 18998213  T
Q  487 atatc 491  Q
    |||||    
T  18998214 atatc 18998218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 389 - 491
Target Start/End: Original strand, 11687143 - 11687245
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  11687143 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttat 11687242  T
Q  489 atc 491  Q
    |||    
T  11687243 atc 11687245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 398 - 490
Target Start/End: Complemental strand, 3369147 - 3369055
Alignment:
Q  398 ttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3369147 ttaggtacaattcgttaggtgcttttcgtatcgttcctaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatat 3369055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 393 - 488
Target Start/End: Complemental strand, 29609168 - 29609073
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  29609168 aaaacttacgtacaattccttagatgcttttcgtatggtttttaactaaattcaccgtgatttccttaaatccataattttctcaaagtttgttat 29609073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 394 - 492
Target Start/End: Complemental strand, 4239020 - 4238922
Alignment:
Q  394 aaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    ||||||||||||||||||||  |||||||| ||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  4239020 aaacttaggtacaattccttctgtgctttttgtatggttcttaattaaattcaccatgattttctcaaatccttaattttctcaaagtttgttatatcc 4238922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 13172574 - 13172676
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||  ||| || |||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||    
T  13172574 ggagaaaacttaggtacaattctctagatgtttttcgtatggttcttaactaaattca-tatcatttcctcaaatccataattttctcaaagtttgttat 13172672  T
Q  489 atcc 492  Q
    ||||    
T  13172673 atcc 13172676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 387 - 492
Target Start/End: Complemental strand, 20501878 - 20501774
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||| |||||||||    
T  20501878 atggaaaaaacttag-tacaatttcttaggtgcttttcgtatggttcttaactaaaaataccatgatttcttcaaatccataattttctcgaagtttgtt 20501780  T
Q  487 atatcc 492  Q
    ||||||    
T  20501779 atatcc 20501774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 389 - 486
Target Start/End: Complemental strand, 17279695 - 17279601
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    ||||||||||||||||||||| ||||||||   ||||||| ||||||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||    
T  17279695 ggagaaaacttaggtacaatttcttaggtg---ttcgtatagttcttaactaaattcatcatgatttcttcaaattcataattttatcaaagtttgtt 17279601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 387 - 490
Target Start/End: Original strand, 17367062 - 17367158
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    |||||||||||||||||||||||||||| || ||||||||||| ||||||||||        |||||||| |||||| ||||||||||||||||||||||    
T  17367062 atggagaaaacttaggtacaattccttatgttcttttcgtatgattcttaacta-------gatgatttcatcaaattcataattttctcaaagtttgtt 17367154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 21380112 - 21380059
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21380112 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 21380059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 420 - 492
Target Start/End: Original strand, 31764356 - 31764428
Alignment:
Q  420 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    |||| |||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| |||||    
T  31764356 tttttgtatggttcttaactaaattcaccattattttctcaaattcataattttctcaaagtttgttgtatcc 31764428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 411 - 466
Target Start/End: Complemental strand, 6433806 - 6433751
Alignment:
Q  411 cttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatcca 466  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6433806 cttaggtgcttttcgtatggttcttaactaaattcactatgatttcctcaaatcca 6433751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 11687315 - 11687261
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11687315 tggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 11687261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 885385 - 885438
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  885385 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 885438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 4890652 - 4890599
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4890652 ggagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 4890599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 446
Target Start/End: Original strand, 6433690 - 6433747
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattca 446  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  6433690 ggagaaaacttaggtataatttcttaggtgcttttcgtatggttcttaactaaattca 6433747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 387 - 442
Target Start/End: Original strand, 3368983 - 3369038
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  3368983 atggagaaaacttgagtacaattccttaggtgcttttcgtatggttcttaactaaa 3369038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 20501705 - 20501759
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  20501705 tggagaaaacttagttacaattccttaggtgtttttcgtatggttcttaactaaa 20501759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 8091063 - 8091115
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  8091063 gagaaaatttagatacaattccttaggtgcttttcgtatggttcttaactaaa 8091115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 13439695 - 13439748
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| |||||    
T  13439695 ggagaaaacttaggtacaattccttaagtacttttcgtatggttcttagctaaa 13439748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 15546632 - 15546685
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||| || |||| ||||||||||||||||||    
T  15546632 ggagaaaacttaggtacaattccttagttgttttttgtatggttcttaactaaa 15546685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 7808610 - 7808662
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||    
T  7808610 gagaaaacttaggtacaattccttaggtgtttttcgtttggtttttaactaaa 7808662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 442
Target Start/End: Complemental strand, 18998286 - 18998235
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  18998286 agaaaatttagctacaattccttaggtgcttttcgtatggttcttaattaaa 18998235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 416 - 489
Target Start/End: Complemental strand, 7187706 - 7187633
Alignment:
Q  416 gtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    |||||||| |||| ||| ||||||||||  |||||||||| ||||||| |||| |||||||||||||| |||||    
T  7187706 gtgctttttgtatagttattaactaaataaaccatgatttactcaaattcatatttttctcaaagtttattata 7187633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 29609005 - 29609054
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||||||    
T  29609005 aaaacttaggtacaattctttaagtgcttttcgtgtggttcttaactaaa 29609054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 442
Target Start/End: Original strand, 14393574 - 14393614
Alignment:
Q  402 gtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  14393574 gtacaattccttaggtgcttttcgtatgattcttaactaaa 14393614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 426 - 490
Target Start/End: Complemental strand, 30905110 - 30905046
Alignment:
Q  426 tatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||| ||||||||||||| | |||| | |||||||| |||||||||||||||||| ||||||    
T  30905110 tatggtttttaactaaattcatcgtgatctactcaaatctataattttctcaaagttttttatat 30905046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 490
Target Start/End: Original strand, 2599078 - 2599156
Alignment:
Q  411 cttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||| ||||| ||||  |||||||||||||| ||||||||||  |||||| ||||||||| |||||| |||||||||    
T  2599078 cttaggtactttttgtatcattcttaactaaattaaccatgatttgttcaaattcataatttt-tcaaagcttgttatat 2599156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 31764492 - 31764443
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||| ||||| | |||||||||| |||||||||||||    
T  31764492 aaaacttaggtacaatttcttagatacttttcgtatagttcttaactaaa 31764443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 389 - 419
Target Start/End: Complemental strand, 5416685 - 5416655
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgc 419  Q
    |||||||||||||||||||||||||||||||    
T  5416685 ggagaaaacttaggtacaattccttaggtgc 5416655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 3e-52; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 388 - 492
Target Start/End: Complemental strand, 24836192 - 24836088
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24836192 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 24836093  T
Q  488 tatcc 492  Q
    |||||    
T  24836092 tatcc 24836088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 387 - 492
Target Start/End: Original strand, 20184236 - 20184341
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20184236 atggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 20184335  T
Q  487 atatcc 492  Q
    ||||||    
T  20184336 atatcc 20184341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 388 - 490
Target Start/End: Original strand, 31231613 - 31231715
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31231613 tggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 31231712  T
Q  488 tat 490  Q
    |||    
T  31231713 tat 31231715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 34052450 - 34052347
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34052450 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttagctaaattcaccatgatttcctcaaattcataattttctcaaagtttgttat 34052351  T
Q  489 atcc 492  Q
    ||||    
T  34052350 atcc 34052347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 35339278 - 35339381
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  35339278 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatgatttcttcaaatccataattttctcaaagtttgttat 35339377  T
Q  489 atcc 492  Q
    ||||    
T  35339378 atcc 35339381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 392 - 492
Target Start/End: Complemental strand, 30594861 - 30594761
Alignment:
Q  392 gaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 491  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30594861 gaaagcttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 30594762  T
Q  492 c 492  Q
    |    
T  30594761 c 30594761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 393 - 492
Target Start/End: Original strand, 30259070 - 30259169
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30259070 aaaacttaggtacaattccttaggtgcttttcctatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatcc 30259169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 3953042 - 3953145
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3953042 ggagaaaacttaggtacaattccttatgtacttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgttat 3953141  T
Q  489 atcc 492  Q
    ||||    
T  3953142 atcc 3953145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 387 - 489
Target Start/End: Original strand, 10936468 - 10936570
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  10936468 atggagaaaacttatgtacaattccttaggtgcttttcgtacggttcttaactaaattcaccatgacttcctcaaatctataattttctcaaagtttgtt 10936567  T
Q  487 ata 489  Q
    |||    
T  10936568 ata 10936570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 387 - 492
Target Start/End: Complemental strand, 38883394 - 38883289
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||    
T  38883394 atggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgtt 38883295  T
Q  487 atatcc 492  Q
    ||||||    
T  38883294 atatcc 38883289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 388 - 492
Target Start/End: Original strand, 45997507 - 45997611
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    |||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  45997507 tggagaaaacttaggtacaatttcatatgtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttatta 45997606  T
Q  488 tatcc 492  Q
    |||||    
T  45997607 tatcc 45997611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 39617841 - 39617944
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||| ||||| || | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39617841 ggagaaaacttaggtacaatttcttagatgttcttcgtatggttcttaactaaattcaccatgatttcctccaatccataattttctcaaagtttgttat 39617940  T
Q  489 atcc 492  Q
    ||||    
T  39617941 atcc 39617944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 389 - 491
Target Start/End: Complemental strand, 40358289 - 40358184
Alignment:
Q  389 ggagaaaacttaggtacaattcct---taggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgt 485  Q
    ||||||||||||||||||||||||   |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40358289 ggagaaaacttaggtacaattcctccttaggtgcttttcctatgattcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgt 40358190  T
Q  486 tatatc 491  Q
    ||||||    
T  40358189 tatatc 40358184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 388 - 492
Target Start/End: Original strand, 9285713 - 9285817
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||||||| |||||||||||||||||||||||||  |||||||| |||||||||||||    
T  9285713 tggagaaaacttaggtacaattcatttggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaatttataattttatcaaagtttgtta 9285812  T
Q  488 tatcc 492  Q
    |||||    
T  9285813 tatcc 9285817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 388 - 492
Target Start/End: Original strand, 9289780 - 9289884
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||||||| |||||||||||||||||||||||||  |||||||| |||||||||||||    
T  9289780 tggagaaaacttaggtacaattcatttggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaatttataattttatcaaagtttgtta 9289879  T
Q  488 tatcc 492  Q
    |||||    
T  9289880 tatcc 9289884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 390 - 490
Target Start/End: Original strand, 39143713 - 39143813
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    ||||||||||||||||||||| || | ||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  39143713 gagaaaacttaggtacaattcattggatgcttttcgtatggttcttgactaaattcaccataatttcctcaaatccataatattctcaaagtttgttata 39143812  T
Q  490 t 490  Q
    |    
T  39143813 t 39143813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 12142364 - 12142261
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||| || |||||||||||||| ||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  12142364 ggagaaaatttgggtacaattccttatgtgtttttcgtatagttcttaactaaattcaccatgattttctcaaatccataattttctcaaagattgttat 12142265  T
Q  489 atcc 492  Q
    ||||    
T  12142264 atcc 12142261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 391 - 492
Target Start/End: Complemental strand, 37093937 - 37093836
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    |||||| |||| ||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  37093937 agaaaatttagatacaatttcttaggtacttttcgtatggtttttaactaaattcaccatgatttcctcaaatttataattttctcaaagtttgttatat 37093838  T
Q  491 cc 492  Q
    ||    
T  37093837 cc 37093836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 388 - 492
Target Start/End: Original strand, 24123754 - 24123858
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    ||||||||| ||||||||||||||||| || ||||| ||||||||| ||||||||   || |||||||||||||||||||||||||||||||||||||||    
T  24123754 tggagaaaatttaggtacaattccttatgtactttttgtatggttcctaactaaaaatactatgatttcctcaaatccataattttctcaaagtttgtta 24123853  T
Q  488 tatcc 492  Q
    |||||    
T  24123854 tatcc 24123858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 25742435 - 25742534
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||    
T  25742435 ggagaaaacttatgtacaatttcttaggtgtttttcctatggttcttaactaaattcat----atttcctcaaatccataattttctcaaagtttgttat 25742530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 402 - 492
Target Start/End: Original strand, 31521538 - 31521628
Alignment:
Q  402 gtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    |||||||| ||||| |||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||| ||||||||| ||||||||    
T  31521538 gtacaatttcttagatgcttttcgtatggttcttaactaaatttaccatgattttctcaaattcataattttttcaaagtttattatatcc 31521628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 48103536 - 48103436
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||  |||||||| |||||||||||| ||||||||||||||||||||   | |||||||||||||||||||||  ||||||||||||||||    
T  48103536 ggagaaaacttatctacaattctttaggtgctttttgtatggttcttaactaaatt---cgtgatttcctcaaatccataataatctcaaagtttgttat 48103440  T
Q  489 atcc 492  Q
    ||||    
T  48103439 atcc 48103436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 393 - 489
Target Start/End: Complemental strand, 10398486 - 10398390
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    ||||||||||| || |||||||  ||||||| ||||||||||||||||||||  ||||||||||||||||| |||||| ||||||||||||||||||    
T  10398486 aaaacttaggtgcatttccttatatgctttttgtatggttcttaactaaattatccatgatttcctcaaatacataatcttctcaaagtttgttata 10398390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 393 - 492
Target Start/End: Complemental strand, 29278004 - 29277905
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    ||||||||||||||||||||||  |  ||| |||||| || ||||||||||||||||||||||||| ||||||| |||||||||||| |||||| |||||    
T  29278004 aaaacttaggtacaattccttatatattttccgtatgatttttaactaaattcaccatgatttccttaaatccaaaattttctcaaactttgttgtatcc 29277905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 389 - 490
Target Start/End: Original strand, 47237433 - 47237526
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||    
T  47237433 ggagaaaacttaggtataattcct-aggtgcttttcctatggttcttaactaaatt-------atttcctcgaatccataattttctcaaagtttgttat 47237524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 10936641 - 10936588
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10936641 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 10936588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 31231787 - 31231734
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31231787 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 31231734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 389 - 462
Target Start/End: Original strand, 35665633 - 35665706
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaa 462  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||   |||||||||| ||||||    
T  35665633 ggagaaaacttaggtacaattgcttaggtgcttttcgtatggttcttaactaaaaataccatgattttctcaaa 35665706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 38528583 - 38528530
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38528583 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 38528530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 389 - 441
Target Start/End: Original strand, 33721827 - 33721879
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa 441  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33721827 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa 33721879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 420 - 491
Target Start/End: Complemental strand, 33749784 - 33749713
Alignment:
Q  420 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 491  Q
    |||| |||||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||| |||||||    
T  33749784 tttttgtatggttcttaactaaattcatcatgatttccttaaattcataattttctcaaagtttattatatc 33749713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 34052278 - 34052332
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34052278 tggagaaaacttaggtacatttccttaggtgcttttcgtatggttcttaactaaa 34052332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 385 - 442
Target Start/End: Complemental strand, 35665791 - 35665734
Alignment:
Q  385 agatggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35665791 agatagagaaaacttaggtacaattccttaggtgcttttcgtatggtttttaactaaa 35665734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 38883221 - 38883274
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38883221 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 38883274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 384 - 442
Target Start/End: Original strand, 12142187 - 12142245
Alignment:
Q  384 aagatggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  12142187 aagatggagaaaacttaggtacaattccttacgtgctttgggtatggttcttaactaaa 12142245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 24836020 - 24836073
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  24836020 ggagaaaacttaggtacaattgcttaggtgcttttcgtatggttctnaactaaa 24836073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 404 - 492
Target Start/End: Original strand, 16876470 - 16876559
Alignment:
Q  404 acaattccttaggtgctttt-cgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    ||||||| || ||||||||| |||||||||||||  |||||| |||||||||| ||||||||| ||||||||| | ||||||||||||||    
T  16876470 acaattctttgggtgctttttcgtatggttcttacttaaatttaccatgattttctcaaatccgtaattttcttagagtttgttatatcc 16876559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 20184410 - 20184357
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  20184410 ggagaaaacttaggtacaattccttagctgcttttcgtatgattcttaactaaa 20184357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 30259237 - 30259184
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  30259237 ggagaaaacttaggtacaattccttgggtgctttttgtatggttcttaactaaa 30259184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 30594693 - 30594746
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  30594693 ggagaaaacttaggtacaattccttaggtgcttttcgcatagttcttaactaaa 30594746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 47237599 - 47237546
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  47237599 ggagaaaacttaggtacaatttctaaggtgcttttcgtatggttcttaactaaa 47237546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 389 - 440
Target Start/End: Complemental strand, 39143877 - 39143826
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaacta 440  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  39143877 ggagaaaacttaggtacaattcattaggtgtttttcgtatggttcttaacta 39143826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 434
Target Start/End: Complemental strand, 17101746 - 17101700
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttct 434  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  17101746 tggagaaaacttaggtacaatttcttaggtgcttttcgtatggttct 17101700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 29277837 - 29277891
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||    
T  29277837 tggagaaaacttaggtacaattctttaggtactttttgtatggttcttaactaaa 29277891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 434
Target Start/End: Original strand, 17101654 - 17101699
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttct 434  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  17101654 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttct 17101699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 491
Target Start/End: Original strand, 38989084 - 38989173
Alignment:
Q  402 gtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 491  Q
    |||||||| |||| ||  ||||||||| ||| ||||||||||| | ||| |||| || ||||| ||||||||||||||||||||||||||    
T  38989084 gtacaatttcttatgtatttttcgtatagtttttaactaaatttatcataattttcttaaatctataattttctcaaagtttgttatatc 38989173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 48103368 - 48103421
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  48103368 ggagaaaacttaggtacaatttcttaggtgtttttcgtatgattcttaactaaa 48103421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 386 - 442
Target Start/End: Complemental strand, 3953216 - 3953160
Alignment:
Q  386 gatggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||| ||||||| ||||||| ||||| ||||||||||||||||||    
T  3953216 gatggagaaaacttagatacaattacttaggtactttttgtatggttcttaactaaa 3953160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 442
Target Start/End: Complemental strand, 35339447 - 35339396
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  35339447 agaaaacttaggtacaattccttatgtacttttcgtatggttcttaaataaa 35339396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 443 - 490
Target Start/End: Original strand, 38528464 - 38528511
Alignment:
Q  443 ttcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||    
T  38528464 ttcaccatgaattcctcgaatccataattttctcaaagtttgttatat 38528511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 430 - 485
Target Start/End: Complemental strand, 44148777 - 44148722
Alignment:
Q  430 gttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgt 485  Q
    |||||||| |||||||||  ||||||||| ||||||||||||||||||||||||||    
T  44148777 gttcttaattaaattcactgtgatttccttaaatccataattttctcaaagtttgt 44148722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 39618013 - 39617960
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||    
T  39618013 tggagaaaacttag-tacaattctttaggtgcttttcgtatagttcttaactaaa 39617960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 9285885 - 9285832
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||||||| ||||    
T  9285885 ggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaa 9285832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 9289952 - 9289899
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||||||| ||||    
T  9289952 ggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaa 9289899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 489
Target Start/End: Original strand, 22723240 - 22723328
Alignment:
Q  403 tacaattccttaggtgcttttcgtatggttcttaactaa--attcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    |||||||  ||||||| |||||||||| |||||||||||  ||||| | ||||||||| ||||   |||||||||||||||||||||||    
T  22723240 tacaattttttaggtgtttttcgtatgattcttaactaaatattcatcgtgatttccttaaatttttaattttctcaaagtttgttata 22723328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 11486865 - 11486912
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 437  Q
    |||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  11486865 gagaaagcttaggtacaatttcttagatgcttttcgtatggttcttaa 11486912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 489
Target Start/End: Complemental strand, 1403032 - 1402990
Alignment:
Q  447 ccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    |||||||||||||||||| |||||||||||||| |||||||||    
T  1403032 ccatgatttcctcaaatctataattttctcaaaatttgttata 1402990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 447 - 489
Target Start/End: Complemental strand, 25572925 - 25572883
Alignment:
Q  447 ccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    |||||||||| ||||| ||||||||||||||||||||||||||    
T  25572925 ccatgatttcttcaaaaccataattttctcaaagtttgttata 25572883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 25742602 - 25742549
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||| || ||||| |||| ||||||||||||||||| |||||||||    
T  25742602 ggagaaaacttaagtgcaatttcttaagtgcttttcgtatggttgttaactaaa 25742549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 38528394 - 38528443
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||| |||||||||||||||||  ||||||| ||||||||||||||||||    
T  38528394 aaaagttaggtacaattccttaaatgctttttgtatggttcttaactaaa 38528443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 45997679 - 45997626
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||| ||||| |||||||||||||| |||  ||||||||||||||||||    
T  45997679 ggagaaaacctaggtgcaattccttaggtgttttaggtatggttcttaactaaa 45997626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 490
Target Start/End: Original strand, 35007103 - 35007173
Alignment:
Q  419 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    |||||| ||||||| ||||||||||||| | |||||||||| ||||||||  ||| |||||||||| |||||    
T  35007103 cttttcatatggttattaactaaattcatcgtgatttcctc-aatccatatatttttcaaagtttggtatat 35007173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 490
Target Start/End: Complemental strand, 1072358 - 1072302
Alignment:
Q  436 aactaaattcaccatg--atttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||||||||||||  ||||||||||||| ||||||| |||  ||||||||||||    
T  1072358 aactaaattcaccatgtgatttcctcaaatctataatttcctctgagtttgttatat 1072302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 483
Target Start/End: Original strand, 21581183 - 21581240
Alignment:
Q  426 tatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagttt 483  Q
    ||||||||||||||||||||| ||||||||  | |||||||| |||||  ||||||||    
T  21581183 tatggttcttaactaaattcatcatgatttttttaaatccatgatttttgcaaagttt 21581240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 37093768 - 37093821
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||| |||||||||||| |||||||  |||||||||| ||||||| ||||    
T  37093768 ggagaaaatttaggtacaatttcttaggtatttttcgtatgattcttaattaaa 37093821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 2e-50; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 391 - 492
Target Start/End: Complemental strand, 40891182 - 40891081
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40891182 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 40891083  T
Q  491 cc 492  Q
    ||    
T  40891082 cc 40891081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 17426628 - 17426731
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17426628 ggagaaaacttaggtacaattcattaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatctataattttctcaaagtttgttat 17426727  T
Q  489 atcc 492  Q
    ||||    
T  17426728 atcc 17426731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 15882372 - 15882269
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  15882372 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattttctcaaatccataatattctcaaagttagttat 15882273  T
Q  489 atcc 492  Q
    ||||    
T  15882272 atcc 15882269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 38629645 - 38629542
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  38629645 ggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttattat 38629546  T
Q  489 atcc 492  Q
    ||||    
T  38629545 atcc 38629542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 38520189 - 38520086
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38520189 ggagaaaacttaggtacaattccttaagtgcttttcgtatgttttttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttat 38520090  T
Q  489 atcc 492  Q
    ||||    
T  38520089 atcc 38520086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 393 - 490
Target Start/End: Original strand, 24741827 - 24741924
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  24741827 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccatgattttctcagagtttattatat 24741924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 387 - 492
Target Start/End: Original strand, 29780957 - 29781062
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  29780957 atggataaaatttaggtacaattccttaggtgcttttcgtatggtttttaactaaatttaccataatttcctcaaatccataattttctcaaagtttgtt 29781056  T
Q  487 atatcc 492  Q
    ||||||    
T  29781057 atatcc 29781062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 389 - 490
Target Start/End: Original strand, 23940804 - 23940905
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||| ||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23940804 ggagaaaacttcggtacaatttcttaagtgcttttcgtatgattcttaactaaattcaccatgatttcctcaaatccgtaattttctcaaagtttgttat 23940903  T
Q  489 at 490  Q
    ||    
T  23940904 at 23940905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 387 - 491
Target Start/End: Original strand, 33100643 - 33100747
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||   ||| | |||||||||||||||||||||||||||||||||||    
T  33100643 atggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaaaataccgttatttcctcaaatccataattttctcaaagtttgtt 33100742  T
Q  487 atatc 491  Q
    |||||    
T  33100743 atatc 33100747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 402 - 490
Target Start/End: Original strand, 4261989 - 4262077
Alignment:
Q  402 gtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  4261989 gtacaattctttaggtgcttttcgtatggttcttaactaaattcactatgatttcctcaagtccataattttctcaaagtttgttatat 4262077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 12234638 - 12234534
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaag-tttgtta 487  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  12234638 ggagaaaacttaggtacaatttcttagatgcttttcgtatggttattaactaaattcacgatgatttcctcaaattcataattttctcaaagttttgtta 12234539  T
Q  488 tatcc 492  Q
    |||||    
T  12234538 tatcc 12234534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 8210494 - 8210391
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||| |||||||||||||| || |||| ||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8210494 ggagaaaacttaagtacaattccttagatgttttttgtatgattcttaaccaaattcatcatgatttcctcaaatccataattttctcaaagtttgttat 8210395  T
Q  489 atcc 492  Q
    ||||    
T  8210394 atcc 8210391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 389 - 491
Target Start/End: Original strand, 24211278 - 24211380
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| | ||||||| || ||||||||||||||| ||||||||||    
T  24211278 ggagaaaacttaggtacaattctttaggtgcttttcgtatggttcttaattaaattcaccgtaatttccttaattccataattttctcatagtttgttat 24211377  T
Q  489 atc 491  Q
    |||    
T  24211378 atc 24211380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 405 - 491
Target Start/End: Original strand, 11828612 - 11828698
Alignment:
Q  405 caattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 491  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  11828612 caatttcttaggtgtttttcgtatggttcttaactaaattcaccataatttcctcaaatccattattttctcaaagtttgttatatc 11828698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 393 - 487
Target Start/End: Complemental strand, 35467337 - 35467243
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||| |||||||||||    
T  35467337 aaaacttacgtacaattccttatgtgcttttcgtatggttcttaactaaattcatcatgatttctttaaatccataattttcttaaagtttgtta 35467243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 391 - 492
Target Start/End: Complemental strand, 37114407 - 37114306
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    |||||| ||||||||||||| |||| || |||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||    
T  37114407 agaaaatttaggtacaattctttagatgttttttgtatggttcttaactaaattcaccatgattttcttaaatccataattttctcaaagtttattatat 37114308  T
Q  491 cc 492  Q
    ||    
T  37114307 cc 37114306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 393 - 490
Target Start/End: Original strand, 14834676 - 14834770
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||| |||||||   ||||||||||||||||    
T  14834676 aaaacttacgtacaattccttacgtgcttttcgtatggttcttaactaaattcaccatgattttcttaaattcataatt---tcaaagtttgttatat 14834770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 387 - 479
Target Start/End: Complemental strand, 38515677 - 38515585
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaa 479  Q
    ||||||||||||||||||||||||||||| ||| |||||| ||||| |||| ||||   || |||||||||||||||||||||||||||||||    
T  38515677 atggagaaaacttaggtacaattccttagatgcatttcgtgtggtttttaattaaaaatacaatgatttcctcaaatccataattttctcaaa 38515585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 40393893 - 40393791
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||| | |||||| |||||||||||||  ||||||||||| ||||||||||||| ||||||||||||   ||||||||||||| ||||||||    
T  40393893 ggagaaaacttaagcacaatttcttaggtgcttttattatggttcttagctaaattcaccataatttcctcaaat-tttaattttctcaaaatttgttat 40393795  T
Q  489 atcc 492  Q
    ||||    
T  40393794 atcc 40393791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 393 - 492
Target Start/End: Complemental strand, 38405305 - 38405207
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    ||||||||| ||||||| |||| ||| |||| ||||||||||||||||||||||  ||||||| || |||| | ||||||||||||||||||||||||||    
T  38405305 aaaacttag-tacaatttcttatgtgttttttgtatggttcttaactaaattcataatgattttcttaaattcgtaattttctcaaagtttgttatatcc 38405207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 389 - 443
Target Start/End: Original strand, 8210323 - 8210377
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaat 443  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8210323 ggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaat 8210377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 15882200 - 15882253
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15882200 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 15882253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 24211450 - 24211401
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 437  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24211450 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 24211401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 393 - 489
Target Start/End: Complemental strand, 33390813 - 33390717
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    ||||||||||| || ||||||||||||||||| ||||||| ||| |||||||   || ||||||||||||| || ||||||||||||||| ||||||    
T  33390813 aaaacttaggtgcatttccttaggtgcttttcatatggtttttagctaaattactcacgatttcctcaaattcacaattttctcaaagttcgttata 33390717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 37114239 - 37114291
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37114239 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaa 37114291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 17426801 - 17426748
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  17426801 ggagaaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaa 17426748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 23940976 - 23940923
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  23940976 ggagaaaacttagttacaattccttaggtgcttttcgtatggtttttaactaaa 23940923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 29781130 - 29781077
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  29781130 ggagaaaacttaggtccaattccttagatgcttttcgtatggttcttaactaaa 29781077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 4035741 - 4035794
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||| ||||| |||||||||||||||||| ||||||||||    
T  4035741 ggagaaaacttaggtacagttcctcaggtgcttttcgtatggtacttaactaaa 4035794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 12234466 - 12234519
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  12234466 ggagaaaacttaggtataattctttgggtgcttttcgtatggttcttaactaaa 12234519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 38520018 - 38520071
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||    
T  38520018 ggagaaaatttaggtataattccttagttgcttttcgtatggttcttaactaaa 38520071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 397 - 486
Target Start/End: Original strand, 9775206 - 9775297
Alignment:
Q  397 cttaggtacaattccttaggtgcttttcgtatggttcttaacta--aattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    |||||||| |||||||||  ||||||||||||| || |||| ||  |||||||||  |||| ||||||| ||||||||||||||||||||||    
T  9775206 cttaggtataattccttatatgcttttcgtatgatttttaattataaattcaccaaaattttctcaaattcataattttctcaaagtttgtt 9775297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 33100815 - 33100763
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||| |||| |||||||||||| ||||||||||||||    
T  33100815 gagaaaacttaggtacaatttcttatgtgcttttcgtacggttcttaactaaa 33100763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 439 - 490
Target Start/End: Original strand, 25264277 - 25264328
Alignment:
Q  439 taaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||||||||||    
T  25264277 taaattcacaatgatttcctcaaattcataattttcttaaagtttgttatat 25264328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 11828774 - 11828721
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||  |||||||| ||| |||||||||||||    
T  11828774 ggagaaaacttaggtacaattccttacttgcttttcatatcgttcttaactaaa 11828721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 426 - 489
Target Start/End: Original strand, 7959857 - 7959920
Alignment:
Q  426 tatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    |||||||||||||||||||  | |||||||||| ||||| ||| || |||||||||||||||||    
T  7959857 tatggttcttaactaaatttgctatgatttcctaaaatctatagttgtctcaaagtttgttata 7959920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 455
Target Start/End: Complemental strand, 33940774 - 33940713
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattt 455  Q
    ||||||||| |||||||||||||||| || ||  |||||||||||||||||| ||||||||||    
T  33940774 aaaacttag-tacaattccttaggtgtttgtcacatggttcttaactaaatttaccatgattt 33940713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 38629474 - 38629527
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||| ||| ||||||||| |||  ||||||||||||||||||||||||||    
T  38629474 ggagaaaatttaagtacaattctttaaatgcttttcgtatggttcttaactaaa 38629527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 419
Target Start/End: Complemental strand, 4036602 - 4036570
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgc 419  Q
    |||||||||||||||||||||||||||||||||    
T  4036602 atggagaaaacttaggtacaattccttaggtgc 4036570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 442
Target Start/End: Complemental strand, 24741996 - 24741941
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||| |||| || |||||||||| | ||||| |||||||||||||||||||||||    
T  24741996 atggacaaaatttgggtacaattcttgaggtgattttcgtatggttcttaactaaa 24741941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 473
Target Start/End: Original strand, 5356153 - 5356207
Alignment:
Q  419 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataatttt 473  Q
    ||||||| ||||||||| |||||||||||||| |||| || |||||||| |||||    
T  5356153 cttttcgcatggttcttgactaaattcaccataattttcttaaatccatcatttt 5356207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 35467175 - 35467224
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||| |||| | ||||| || |||||||||||||||    
T  35467175 aaaacttaggtacaattctttagatactttttgtgtggttcttaactaaa 35467224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 5356294 - 5356242
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||| ||||||| | |||||| |||||||||| ||||||| ||||    
T  5356294 gagaaaacttagatacaatttcgtaggtgtttttcgtatgattcttaattaaa 5356242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 449 - 489
Target Start/End: Complemental strand, 10778768 - 10778728
Alignment:
Q  449 atgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    ||||||||||||||| || ||| ||||||||||||||||||    
T  10778768 atgatttcctcaaattcacaatcttctcaaagtttgttata 10778728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 391 - 423
Target Start/End: Original strand, 26261502 - 26261534
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgctttt 423  Q
    ||||||||||||||||||||||||| |||||||    
T  26261502 agaaaacttaggtacaattccttagatgctttt 26261534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 457 - 489
Target Start/End: Original strand, 29869941 - 29869973
Alignment:
Q  457 ctcaaatccataattttctcaaagtttgttata 489  Q
    |||||||||| ||||||||||||||||||||||    
T  29869941 ctcaaatccacaattttctcaaagtttgttata 29869973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 7e-50; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 384 - 492
Target Start/End: Original strand, 24915789 - 24915897
Alignment:
Q  384 aagatggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagttt 483  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24915789 aagaaggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagttt 24915888  T
Q  484 gttatatcc 492  Q
    |||||||||    
T  24915889 gttatatcc 24915897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 42274492 - 42274595
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42274492 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 42274591  T
Q  489 atcc 492  Q
    ||||    
T  42274592 atcc 42274595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 530669 - 530772
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  530669 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaattcaccatcatttcctcaaatccataattttctcaaagtttgttat 530768  T
Q  489 atcc 492  Q
    ||||    
T  530769 atcc 530772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 1299083 - 1298980
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1299083 ggagaaaacttaggtacaattccttaggtgcttttcttatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttat 1298984  T
Q  489 atcc 492  Q
    ||||    
T  1298983 atcc 1298980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 18417828 - 18417725
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18417828 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 18417729  T
Q  489 atcc 492  Q
    ||||    
T  18417728 atcc 18417725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 390 - 492
Target Start/End: Original strand, 32318721 - 32318823
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32318721 gagaaaacttaggtacaattccttatgtgcttttcgtatggttcttaactaaattcaccatgatttcctcagatccataattttctcaaagtttgttata 32318820  T
Q  490 tcc 492  Q
    |||    
T  32318821 tcc 32318823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 391 - 492
Target Start/End: Original strand, 24969543 - 24969644
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24969543 agaaaacttaggtacaattctttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatat 24969642  T
Q  491 cc 492  Q
    ||    
T  24969643 cc 24969644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 389 - 491
Target Start/End: Original strand, 21048705 - 21048807
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21048705 ggagaaaacttaggtacaattcgttagatgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcgaagtttgttat 21048804  T
Q  489 atc 491  Q
    |||    
T  21048805 atc 21048807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 387 - 492
Target Start/End: Complemental strand, 27434783 - 27434678
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||    
T  27434783 atggagaaaacttaagtacaattccttaggtgcttttcgtatggttcttaactaaatttaccataatttcctcaaattcataattttctcaaagtttgtt 27434684  T
Q  487 atatcc 492  Q
    ||||||    
T  27434683 atatcc 27434678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 13204548 - 13204445
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13204548 ggagaaaacttaggtacaattccttatgtacttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgttat 13204449  T
Q  489 atcc 492  Q
    ||||    
T  13204448 atcc 13204445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 55107695 - 55107592
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  55107695 ggagaaaacttaggtacaattccttaggtgctttttgtatggttctttactaaatttaccatgatttcctcaaatgcataattttctcaaagtttgttat 55107596  T
Q  489 atcc 492  Q
    ||||    
T  55107595 atcc 55107592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 387 - 492
Target Start/End: Original strand, 20435138 - 20435243
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    ||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  20435138 atggagaaaacttatatacaattccttagatgcttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcgaagtttgtt 20435237  T
Q  487 atatcc 492  Q
    ||||||    
T  20435238 atatcc 20435243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 388 - 492
Target Start/End: Original strand, 55049399 - 55049503
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||    
T  55049399 tggagaaaacttatgtacaattccttaggtgcttttcgtatagttcttaactaaattcactatgatttcctcaaacccataattttttcaaagtttgtta 55049498  T
Q  488 tatcc 492  Q
    |||||    
T  55049499 tatcc 55049503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 4552956 - 4552853
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4552956 ggagaaaacttaggtacaattccttatatgctttctgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgttat 4552857  T
Q  489 atcc 492  Q
    ||||    
T  4552856 atcc 4552853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 23928568 - 23928670
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23928568 ggagaaaacttaggtacaattccttag-tgtttttcgtatgattcttaactaaattcaccatgatttcctcaaatccataattttctcaaaatttgttat 23928666  T
Q  489 atcc 492  Q
    ||||    
T  23928667 atcc 23928670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 390 - 492
Target Start/End: Original strand, 4688248 - 4688350
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||| || ||||||||||||||||||||||    
T  4688248 gagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcactgtgatttcctcaaattcacaattttctcaaagtttgttata 4688347  T
Q  490 tcc 492  Q
    |||    
T  4688348 tcc 4688350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 389 - 491
Target Start/End: Complemental strand, 35360846 - 35360745
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||| |||||||  |||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35360846 ggagaaaacttag-tacaattttttagttgtttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttat 35360748  T
Q  489 atc 491  Q
    |||    
T  35360747 atc 35360745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 28809846 - 28809950
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaatt-caccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||| ||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||    
T  28809846 ggagaaaacttaggtacaatttcttaggtgcttttggtattgtttttaactaaatttcaccatgattttctcaaatccataattttctcaaaatttgtta 28809945  T
Q  488 tatcc 492  Q
    |||||    
T  28809946 tatcc 28809950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 393 - 488
Target Start/End: Original strand, 9355557 - 9355652
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||    
T  9355557 aaaacttccgtacaattccttaggtgcttttcatatggttcttaactaaattcaccatgatttccttaaatccataattttctcagaatttgttat 9355652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 394 - 491
Target Start/End: Complemental strand, 24294636 - 24294536
Alignment:
Q  394 aaacttaggtacaattccttaggtgct---tttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||||||||||||||||||||| |   |||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  24294636 aaacttaggtacaattccttaggtggtgtttttcgtatggttcttaactaaattcaccataatttcctcaaattcgtaattttctcaaagtttgttatat 24294537  T
Q  491 c 491  Q
    |    
T  24294536 c 24294536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 401 - 492
Target Start/End: Complemental strand, 2272525 - 2272434
Alignment:
Q  401 ggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    |||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  2272525 ggtacaattcattatgtgcttttcgtatggttcttagctaaattcaccatgatttccttaaatccataattttatcaaagtttgttctatcc 2272434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 389 - 483
Target Start/End: Original strand, 3422429 - 3422523
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagttt 483  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||| |||||| |  ||||||| |||||||||||||||||||||||||||    
T  3422429 ggagaaaacttaggtacaatttcttaggtgcttttcgtatagttcttaattaaatttagtatgattttctcaaatccataattttctcaaagttt 3422523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 389 - 462
Target Start/End: Original strand, 43486200 - 43486273
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaa 462  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||    
T  43486200 ggagaaaacttaggtacaattccttaggtacttttcctatggttcttaactaaattcaccatgattttctcaaa 43486273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 416 - 489
Target Start/End: Complemental strand, 56552205 - 56552132
Alignment:
Q  416 gtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    |||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  56552205 gtgcttatcgtatggttcttaaataaattaaccatgatttcctcaaatccataattttctcaaagtttgttata 56552132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 387 - 491
Target Start/End: Original strand, 16995553 - 16995656
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||| |||| |||||||| |||||||| |||||| |||| ||||| ||| ||||||||    
T  16995553 atggaaaaaacttaggtacaattcctt-ggtgtttttcgtatggtttttaattaaattcaacatgattttctcaaacccatcattttttcagagtttgtt 16995651  T
Q  487 atatc 491  Q
    |||||    
T  16995652 atatc 16995656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 420 - 490
Target Start/End: Complemental strand, 4895113 - 4895042
Alignment:
Q  420 ttttcgtatggtt-cttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  4895113 ttttcgtatggtttcttaactaaatttaccatgatttcctcaaattcataattttctcaaagtttgttatat 4895042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 391 - 490
Target Start/End: Original strand, 36030941 - 36031031
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    |||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||         |||||||||||||||||||||||||||||||||||    
T  36030941 agaaaagttaggtacaattccttacgtgcttttcgtatgtttcttaactaaattca---------cctcaaatccataattttctcaaagtttgttatat 36031031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 530841 - 530787
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  530841 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 530787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 52824239 - 52824292
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52824239 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 52824292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 18417658 - 18417710
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18417658 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 18417710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 24969716 - 24969662
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24969716 tggagaaaacttaggtacaattccttaggtgcttttcgtatagttcttaactaaa 24969662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 1298912 - 1298965
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1298912 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 1298965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 20435311 - 20435258
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20435311 ggagaaaacttaggtacaattctttaggtgcttttcgtatggttcttaactaaa 20435258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 42274663 - 42274611
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42274663 gagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 42274611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 393 - 489
Target Start/End: Original strand, 47452814 - 47452910
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    ||||||||||| || ||||| ||||||||||| |||||||||||||| || |  ||||| |||||||||||||| ||||||| | ||||||||||||    
T  47452814 aaaacttaggttcatttcctaaggtgcttttcatatggttcttaacttaactacccatgttttcctcaaatccacaattttcccgaagtttgttata 47452910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 387 - 442
Target Start/End: Original strand, 55107522 - 55107577
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  55107522 atggagaaaacttaggtacaattccttatgtgcttttcatatggttcttaactaaa 55107577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 387 - 442
Target Start/End: Complemental strand, 23928740 - 23928685
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||    
T  23928740 atggagaaaacttatgtacaattccttaggtgctttgcgtatgattcttaactaaa 23928685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 391 - 442
Target Start/End: Complemental strand, 37525112 - 37525061
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  37525112 agaaaacttaggtacaattctttaggtgcttttcgtgtggttcttaactaaa 37525061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 4552785 - 4552838
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||| ||||||||| ||||||| |||||||||    
T  4552785 ggagaaaacttaggtacaattccttaagtgcttttcatatggtttttaactaaa 4552838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 387 - 436
Target Start/End: Original strand, 28573945 - 28573994
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttctta 436  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  28573945 atggagaaaacttaggtacaattacttaggtgcttttcgcatggttctta 28573994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 4688418 - 4688366
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| ||||    
T  4688418 gagaaaacttaggtacaattccttagatgattttcgtatggttcttaattaaa 4688366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 389 - 440
Target Start/End: Complemental strand, 28810018 - 28809967
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaacta 440  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  28810018 ggagaaaacttaggtacaatttcttagctgcttttggtatggttcttaacta 28809967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 3422596 - 3422547
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  3422596 aaaacttaggtacaattctttaggtgtttttcgtatggtttttaactaaa 3422547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 13204377 - 13204430
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||| ||||||| ||||||| ||||| ||||||||||||||||||    
T  13204377 ggagaaaacttagatacaattacttaggtactttttgtatggttcttaactaaa 13204430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 27434610 - 27434663
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||| |||| |||||||| |||| |||||||||||||    
T  27434610 ggagaaaacttaggtacaatttcttatgtgctttttgtatagttcttaactaaa 27434663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 488
Target Start/End: Original strand, 19600939 - 19601039
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    |||| |||| |||| |||||||| ||||||  ||||  ||||||| |||| ||||||| |||||||||  | ||||||||||| || |||||||||||||    
T  19600939 tggaaaaaatttagatacaattctttaggtaatttttatatggtttttaattaaattcgccatgattttgttaaatccataatattttcaaagtttgtta 19601038  T
Q  488 t 488  Q
    |    
T  19601039 t 19601039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 443
Target Start/End: Complemental strand, 52587481 - 52587430
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaat 443  Q
    ||||||||||||||||   || |||||||||||||||||||||||||||||||||    
T  52587481 ggagaaaacttaggta---ttacttaggtgcttttcgtatggttcttaactaaat 52587430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 456 - 491
Target Start/End: Original strand, 52587382 - 52587417
Alignment:
Q  456 cctcaaatccataattttctcaaagtttgttatatc 491  Q
    ||||||||||||||||||||||||||||||||||||    
T  52587382 cctcaaatccataattttctcaaagtttgttatatc 52587417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 452 - 491
Target Start/End: Complemental strand, 52824347 - 52824308
Alignment:
Q  452 atttcctcaaatccataattttctcaaagtttgttatatc 491  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  52824347 atttcctcaaatccataattttctcaaagtttattatatc 52824308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 442
Target Start/End: Original strand, 56552064 - 56552114
Alignment:
Q  392 gaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||| ||||||| |||||||||||||||| |||||||||| |||||||    
T  56552064 gaaaactcaggtacatttccttaggtgctttttgtatggttctcaactaaa 56552114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 408 - 477
Target Start/End: Original strand, 2990573 - 2990642
Alignment:
Q  408 ttccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctca 477  Q
    ||||||| ||||||||| | |||||||||||| ||||  || ||||||||| | ||||||||||||||||    
T  2990573 ttccttaagtgcttttcatgtggttcttaacttaattacccgtgatttccttacatccataattttctca 2990642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 462
Target Start/End: Original strand, 11330106 - 11330179
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaa 462  Q
    ||||||||||||| ||||||| ||||| |||||||| |||| ||||||||| ||   |||||||||| ||||||    
T  11330106 ggagaaaacttagatacaatttcttagatgcttttcatatgattcttaactgaaaataccatgattttctcaaa 11330179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 47465151 - 47465102
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||| ||||||||||||| |||| || |||||||||    
T  47465151 aaaacttaggtacaattctttaggtgcttttcatatgatttttaactaaa 47465102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 2272366 - 2272420
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||| ||||||||| |||||||  ||||||||||||  |||||||||||||||||    
T  2272366 tggacaaaacttagttacaattttttaggtgctttttatatggttcttaactaaa 2272420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 24915969 - 24915917
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||| |||| || ||||| | ||||||||||||||||    
T  24915969 ggagaaaacttaggtacaatttcttatgtactttttg-atggttcttaactaaa 24915917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 32318891 - 32318838
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||| ||| ||||||||| ||||||||||||| |||| ||||||| ||||    
T  32318891 ggagaaaatttaagtacaattctttaggtgcttttcatatgattcttaattaaa 32318838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 35360677 - 35360729
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||| |||||||  ||||||  |||||||||||||||||||||||    
T  35360677 ggagaaaacttag-tacaatttattaggtatttttcgtatggttcttaactaaa 35360729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 42020257 - 42020208
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||  ||| | ||||| ||||||||||||||||||    
T  42020257 aaaacttaggtacaattctctagatactttttgtatggttcttaactaaa 42020208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 477
Target Start/End: Complemental strand, 42906926 - 42906861
Alignment:
Q  412 ttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctca 477  Q
    ||||||||||||| |||||||| ||||||||||    |||||||| ||||||||| | ||||||||    
T  42906926 ttaggtgcttttcctatggttcctaactaaattacttatgatttcttcaaatccacagttttctca 42906861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 441
Target Start/End: Complemental strand, 16995721 - 16995673
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa 441  Q
    ||||||||| |||||||| ||| ||| ||||||||||||| ||||||||    
T  16995721 aaaacttagatacaattctttaagtgattttcgtatggtttttaactaa 16995673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 3e-49; HSPs: 95)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 21969157 - 21969260
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21969157 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttat 21969256  T
Q  489 atcc 492  Q
    ||||    
T  21969257 atcc 21969260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 21991593 - 21991696
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21991593 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttat 21991692  T
Q  489 atcc 492  Q
    ||||    
T  21991693 atcc 21991696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 387 - 492
Target Start/End: Original strand, 13078161 - 13078266
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13078161 atggagaaaacttaggtgcaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgtt 13078260  T
Q  487 atatcc 492  Q
    ||||||    
T  13078261 atatcc 13078266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 3970491 - 3970594
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3970491 ggagaaaacttaggtgcaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttat 3970590  T
Q  489 atcc 492  Q
    ||||    
T  3970591 atcc 3970594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 4072273 - 4072376
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4072273 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttat 4072372  T
Q  489 atcc 492  Q
    ||||    
T  4072373 atcc 4072376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 25446420 - 25446318
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25446420 ggagaaaacttag-tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 25446322  T
Q  489 atcc 492  Q
    ||||    
T  25446321 atcc 25446318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 45487970 - 45487867
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  45487970 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaatgtttgttat 45487871  T
Q  489 atcc 492  Q
    ||||    
T  45487870 atcc 45487867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 50099605 - 50099502
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  50099605 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccataatttcctcaaattcataattttctcaaagtttgttat 50099506  T
Q  489 atcc 492  Q
    ||||    
T  50099505 atcc 50099502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 387 - 492
Target Start/End: Complemental strand, 22101338 - 22101233
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22101338 atggagaaaacttaggtacaattccttatgagcttttcgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgtt 22101239  T
Q  487 atatcc 492  Q
    ||||||    
T  22101238 atatcc 22101233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 390 - 492
Target Start/End: Complemental strand, 8831911 - 8831809
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8831911 gagaaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaattcaccatgatttcttcaaatccataattttctcaaagtttgttata 8831812  T
Q  490 tcc 492  Q
    |||    
T  8831811 tcc 8831809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 22176280 - 22176177
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  22176280 ggagaaaacttaggtacaattccttatgtgctttttgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgtaat 22176181  T
Q  489 atcc 492  Q
    ||||    
T  22176180 atcc 22176177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 26906625 - 26906522
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  26906625 ggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttat 26906526  T
Q  489 atcc 492  Q
    ||||    
T  26906525 atcc 26906522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 36278756 - 36278859
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  36278756 ggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttat 36278855  T
Q  489 atcc 492  Q
    ||||    
T  36278856 atcc 36278859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 390 - 492
Target Start/End: Complemental strand, 10254739 - 10254637
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||    
T  10254739 gagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatgattttctcaaatccataattttttcaaagtttgttata 10254640  T
Q  490 tcc 492  Q
    |||    
T  10254639 tcc 10254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 391 - 492
Target Start/End: Complemental strand, 12838246 - 12838145
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    |||||||||| ||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12838246 agaaaacttatgtacaattctttaggtgtttttcgtatggtttttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 12838147  T
Q  491 cc 492  Q
    ||    
T  12838146 cc 12838145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 387 - 492
Target Start/End: Original strand, 25488339 - 25488444
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    ||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  25488339 atggagaaatcttaagtacaattccttaggtgcttttcgtatagttcttaactaaattcaccatgatttcttcatatccataattttctcaaagtttgtt 25488438  T
Q  487 atatcc 492  Q
    ||||||    
T  25488439 atatcc 25488444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 391 - 492
Target Start/End: Original strand, 32237396 - 32237497
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||    
T  32237396 agaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaatttaccatgattttctcagatccataattttctcaaagtttgttatat 32237495  T
Q  491 cc 492  Q
    ||    
T  32237496 cc 32237497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 25561182 - 25561079
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  25561182 ggagaaatcttaagtacaattccttaggtgcttttcgtatagttcttaactaaattcaccatgatttcttcatatccataattttctcaaagtttgttat 25561083  T
Q  489 atcc 492  Q
    ||||    
T  25561082 atcc 25561079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 35368904 - 35368801
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35368904 ggagaaaacttaggtacaatttcttatgtgtttttcgtatggtttttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttat 35368805  T
Q  489 atcc 492  Q
    ||||    
T  35368804 atcc 35368801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 36822760 - 36822863
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||| |||||||||||||||||||||||||||    
T  36822760 ggagaaaacttaggtacaattccttagctgcttttcgtatggttcttaactaaaaataccatgatttcctcagatccataattttctcaaagtttgttat 36822859  T
Q  489 atcc 492  Q
    ||||    
T  36822860 atcc 36822863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 43639081 - 43639184
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||| || |||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43639081 ggagaaaacttagttataattccttaggtgcttttcgtatgattcttaaccaaattcaccatgatttcttcaaatccataattttctcaaagtttgttat 43639180  T
Q  489 atcc 492  Q
    ||||    
T  43639181 atcc 43639184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 389 - 491
Target Start/End: Original strand, 36657433 - 36657535
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  36657433 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttat 36657532  T
Q  489 atc 491  Q
    |||    
T  36657533 atc 36657535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 12789777 - 12789674
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||| |||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  12789777 ggagaaaactttggtagaattccttaggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaattcataattttttcaaagtttgttat 12789678  T
Q  489 atcc 492  Q
    ||||    
T  12789677 atcc 12789674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 390 - 492
Target Start/End: Original strand, 13723989 - 13724090
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  13723989 gagaaaacttaggtacaatttcttaggtgctttttgtatggttctta-ctaaattcaccatgatttcttcaaattcataattttctcaaagtttgttata 13724087  T
Q  490 tcc 492  Q
    |||    
T  13724088 tcc 13724090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 387 - 492
Target Start/End: Original strand, 45712901 - 45713006
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    |||||||||||||||||||||||||||||||||||||  | |  |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  45712901 atggagaaaacttaggtacaattccttaggtgctttttttttttttcttaactaaattcaccatgatttcctcaaagccataattttatcaaagtttgtt 45713000  T
Q  487 atatcc 492  Q
    ||||||    
T  45713001 atatcc 45713006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 39850344 - 39850448
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctca-aagtttgtta 487  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||||||||| ||||||||||    
T  39850344 ggagaaaacttaggtactattccttaggtgtttttcgtatggttcttaactaaaaataccatgatttcctcaaatccataattttctcacaagtttgtta 39850443  T
Q  488 tatcc 492  Q
    |||||    
T  39850444 tatcc 39850448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 393 - 488
Target Start/End: Original strand, 1476555 - 1476650
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  1476555 aaaacttaggtacaattccttaggtgcttttggtatggttctaacctaaattcaccatgatttccttaaatccataattctctcaaagtttgttat 1476650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 10117682 - 10117584
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     |||| ||||||||||||||||||||||||||||||||    
T  10117682 ggagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaattca-----attttctcaaatccataattttctcaaagtttgttat 10117588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 10441258 - 10441361
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||| |||||||||||||||||||||| ||||| ||||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  10441258 ggagaaaacttaagtacaattccttaggtgcttttggtatgattcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttat 10441357  T
Q  489 atcc 492  Q
    ||||    
T  10441358 atcc 10441361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 55340293 - 55340396
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||| |||||||||||| |||| ||| |||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  55340293 ggagaaaatttaggtacaatttcttatgtgtttttcgtatgattcttaactatattcaccatgattttctcaaatccataattttctcaaagtttgttat 55340392  T
Q  489 atcc 492  Q
    ||||    
T  55340393 atcc 55340396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 389 - 491
Target Start/End: Original strand, 44611382 - 44611483
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||| ||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  44611382 ggagaaaacttag-tacaattccttaggtactttttgtatagttcttaactaaattcaccatgatttcttcaaattcataattttctcaaagtttgttat 44611480  T
Q  489 atc 491  Q
    |||    
T  44611481 atc 44611483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 391 - 492
Target Start/End: Complemental strand, 404213 - 404113
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||||||| |||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  404213 agaaaacttag-tacaattctttagatgctttccgtatggttcttaactaaattcaccatgatttcctcaagtctataattttctcaaagtttgttatat 404115  T
Q  491 cc 492  Q
    ||    
T  404114 cc 404113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 46679432 - 46679329
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||| |||||||||||| | |||||||  || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  46679432 ggagaaaacttaagtacaattccttggatgctttttatacggttcttaactaaattcaccataatttcctcaaatccataattttctcaaagtttgttaa 46679333  T
Q  489 atcc 492  Q
    ||||    
T  46679332 atcc 46679329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 390 - 492
Target Start/End: Complemental strand, 10017279 - 10017182
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||     |||||| |||||||| ||||||||||||||||| |||||||||||||||    
T  10017279 gagaaaatttaggtacaattccttaggtgcttttcgtatggttctt-----aattcatcatgattttctcaaatccataattttttcaaagtttgttata 10017185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 389 - 483
Target Start/End: Original strand, 26976842 - 26976936
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagttt 483  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||| |||||| |  ||||||| |||||||||||||||||||||||||||    
T  26976842 ggagaaaacttaggtacaatttcttaggtgcttttcgtatagttcttaattaaatttagtatgattttctcaaatccataattttctcaaagttt 26976936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 389 - 483
Target Start/End: Complemental strand, 26977861 - 26977767
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagttt 483  Q
    ||||||||||||||||||||| ||||| | |||||| ||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||    
T  26977861 ggagaaaacttaggtacaatttcttagatacttttcatatggttcttaactaaatttagtatgatttcctcaaatccataattttctcaaagttt 26977767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 393 - 488
Target Start/End: Original strand, 42105387 - 42105482
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||| | ||||| |||||| ||||||||||||||||||||||| |||||| || |||||||||||| ||||||||||||||||    
T  42105387 aaaacttaggtacaatttcataggtacttttcttatggttcttaactaaattcaccgtgattttcttaaatccataattctctcaaagtttgttat 42105482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 43150649 - 43150548
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||| || |||||| ||| |||||| |||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  43150649 ggagaaaacttag-tagaattccatagatgcttt-cgtatgattcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttat 43150552  T
Q  489 atcc 492  Q
    ||||    
T  43150551 atcc 43150548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 393 - 490
Target Start/End: Original strand, 297541 - 297638
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||| || |  |||| || |||||||||||||||||| ||||||||||||    
T  297541 aaaacttaggtacaattcctttggtgcttttcgtatggttcttagctaaatttactacaattttctgaaatccataattttctcatagtttgttatat 297638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 393 - 492
Target Start/End: Complemental strand, 5530059 - 5529960
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    |||| |||||||||||| |||| ||||||||||||||||| |||||||||   ||||||||||| | ||||| ||||||||||||||||||| |||||||    
T  5530059 aaaatttaggtacaatttcttaagtgcttttcgtatggttattaactaaaaataccatgatttctttaaatctataattttctcaaagtttgatatatcc 5529960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 21969328 - 21969275
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21969328 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 21969275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 21991764 - 21991711
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21991764 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 21991711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 403 - 492
Target Start/End: Original strand, 44920661 - 44920749
Alignment:
Q  403 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    ||||||||||||| |||||||| ||||||||||||||||||| || ||||||| |||||||  |||||||||||||||||| ||||||||    
T  44920661 tacaattccttag-tgcttttcttatggttcttaactaaatttacaatgattttctcaaatttataattttctcaaagtttattatatcc 44920749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 45487799 - 45487852
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45487799 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 45487852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 393 - 490
Target Start/End: Complemental strand, 49984098 - 49984001
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    |||||||||||| ||||  |||||| ||||||||| | ||||||||||||||||||||||||| || |||||||||||||| ||||| ||| ||||||    
T  49984098 aaaacttaggtataattttttaggtacttttcgtacgattcttaactaaattcaccatgattttcttaaatccataattttttcaaaatttattatat 49984001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 490
Target Start/End: Original strand, 156978 - 157069
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    ||||||||||| ||||||||||||||||||         |||||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||    
T  156978 gagaaaacttaagtacaattccttaggtgc---------ggttcttaactaaatttatcataatttcctcaaatccataattttctcaaagtttgttata 157068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 393 - 485
Target Start/End: Original strand, 46222032 - 46222124
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgt 485  Q
    ||||| ||| ||||||| |||||||| ||||||||||||| |||||||||||||||||||||| || |||| ||||||||||||  |||||||    
T  46222032 aaaacctagttacaatttcttaggtgtttttcgtatggtttttaactaaattcaccatgattttcttaaattcataattttctcttagtttgt 46222124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 36329188 - 36329283
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||| ||||| | ||||| |||| |||||||| |||||||        |||||||||||||||||||||||||||||||||||    
T  36329188 ggagaaaacttaggtacaatttcttagatactttttgtattgttcttaaataaattc--------ttcctcaaatccataattttctcaaagtttgttat 36329279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 4072445 - 4072392
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4072445 ggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 4072392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 12789606 - 12789659
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12789606 ggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 12789659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 25488512 - 25488459
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25488512 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 25488459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 25561011 - 25561064
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25561011 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 25561064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 26906454 - 26906507
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26906454 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 26906507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 32237565 - 32237512
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32237565 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaa 32237512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 35368549 - 35368602
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35368549 ggagaaaacttaggtacaattccttatgtgcttttcgtatggttcttaactaaa 35368602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 36278927 - 36278874
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36278927 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 36278874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 36657604 - 36657551
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36657604 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 36657551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 39850516 - 39850463
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39850516 ggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaa 39850463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 5529892 - 5529944
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5529892 gagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 5529944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 10017115 - 10017167
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10017115 gagaaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaa 10017167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 10254569 - 10254621
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10254569 gagaaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaa 10254621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 394 - 490
Target Start/End: Complemental strand, 46664342 - 46664246
Alignment:
Q  394 aaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||| ||||||||| |||||||||||||||||| || ||||  |||   | ||| |||||||||||| ||||||||||||||||||||||||||    
T  46664342 aaacttatgtacaattctttaggtgcttttcgtatgatttttaataaaaaatatcataatttcctcaaattcataattttctcaaagtttgttatat 46664246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 391 - 442
Target Start/End: Complemental strand, 43639251 - 43639200
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43639251 agaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaa 43639200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 442
Target Start/End: Complemental strand, 45713071 - 45713021
Alignment:
Q  392 gaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45713071 gaaaacttaggtacaattccttaggtgcttttcgtatggttctaaactaaa 45713021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 1476718 - 1476669
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1476718 aaaacttaggtacaattccttaggtgcttttcatatggttcttaactaaa 1476669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 3970662 - 3970609
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  3970662 ggagaaaacttaggtacaatttcttaggtacttttcgtatggttcttaactaaa 3970609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 8831744 - 8831793
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8831744 aaaacttaggtacaattccttaggtgcttttcgtatggttctaaactaaa 8831793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 10441429 - 10441376
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  10441429 ggagaaaacttaggtacaattccttaggtgcttttggtacggttcttaactaaa 10441376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 36822931 - 36822878
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  36822931 ggagaaaacttaggtacaattttttaggtgcttttcgtatggttcttaactaaa 36822878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 38125350 - 38125297
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  38125350 ggagaaaacttaggtacaattcattaggtgtttttcgtatggttcttaactaaa 38125297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 10117516 - 10117568
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  10117516 gagaaaacttaggtacagttccttaggtgcttttcatatggttcttaactaaa 10117568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 392 - 488
Target Start/End: Original strand, 37506130 - 37506225
Alignment:
Q  392 gaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||| || ||| |||||| ||| ||||  ||||||||||||||||||| || ||||||| || |||| ||||||||||||||||||||||||    
T  37506130 gaaaacttaagtgcaactccttaagtgttttttctatggttcttaactaaatttac-atgattttcttaaattcataattttctcaaagtttgttat 37506225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 391 - 442
Target Start/End: Original strand, 12838079 - 12838130
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  12838079 agaaaacttatgtacaattccttaggtgctttttgtatggttcttaactaaa 12838130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 13078335 - 13078281
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||    
T  13078335 tggagaaaacttaggtacaatttcttaggtacttttcgtatgattcttaactaaa 13078281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 419 - 489
Target Start/End: Complemental strand, 37537011 - 37536941
Alignment:
Q  419 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    ||||| ||||||||||||||||||||    || |||||||| |||||||||||||||||||||||||||||    
T  37537011 ctttttgtatggttcttaactaaattatttataatttcctctaatccataattttctcaaagtttgttata 37536941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 43150479 - 43150533
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| |||||||||    
T  43150479 tggagaaaacttaggtgcaattcctcaggtgcttttcgtatggtttttaactaaa 43150533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 427 - 488
Target Start/End: Original strand, 39677312 - 39677373
Alignment:
Q  427 atggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||| ||||||||| ||||||| ||||||| ||||||||| ||||||||||||||    
T  39677312 atggttcttaattaaattcactatgattttctcaaattcataattttttcaaagtttgttat 39677373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 442
Target Start/End: Complemental strand, 26977015 - 26976960
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  26977015 atggacaaaacttaggtacaattctttaggtgtttttcgtatggtttttaactaaa 26976960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 442
Target Start/End: Complemental strand, 55340467 - 55340412
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||| |||||||||||||||  ||||| |||||||||||||||||    
T  55340467 atggagaaaacttagatacaattccttaggtatttttcatatggttcttaactaaa 55340412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 32362860 - 32362914
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||  |||||||| ||||||| |||||||||||||||||||||||    
T  32362860 tggagaaaacttaactacaattctttaggtgtttttcgtatggttcttaactaaa 32362914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 404044 - 404097
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||| |||||||| ||||||||||||||||||| || |||||||||    
T  404044 ggagaaaacttacgtacaatttcttaggtgcttttcgtatgatttttaactaaa 404097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 25446251 - 25446302
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  25446251 ggagaaaacttag-tacaattccttag-tgcttttcgtatggttcttaactaaa 25446302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 36329351 - 36329298
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||  ||| |||||||| |||||||||||||||||||||||||||||||    
T  36329351 ggagaaaaggtagctacaattctttaggtgcttttcgtatggttcttaactaaa 36329298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 419 - 491
Target Start/End: Complemental strand, 4567322 - 4567250
Alignment:
Q  419 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 491  Q
    |||||||||||||||||| ||||||| | || | ||||||||||| |||  ||||||||| ||||||||||||    
T  4567322 cttttcgtatggttcttacctaaattgatcacggtttcctcaaattcatggttttctcaatgtttgttatatc 4567250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 426 - 492
Target Start/End: Complemental strand, 32363188 - 32363122
Alignment:
Q  426 tatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    ||||||| ||||||||||| || || |||| ||||||||||||||||| | ||| ||||||||||||    
T  32363188 tatggttattaactaaatttacaataattttctcaaatccataattttttaaaaatttgttatatcc 32363122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 396 - 442
Target Start/End: Complemental strand, 44611545 - 44611499
Alignment:
Q  396 acttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||| |||| |||||||| |||||||||    
T  44611545 acttaggtacaattccttaggtgttttttgtatggtttttaactaaa 44611499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 37506293 - 37506244
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||| ||||||||| ||||||| ||||||| |||||||||||||||    
T  37506293 aaaacttatgtacaattctttaggtgtttttcgtgtggttcttaactaaa 37506244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 46664176 - 46664229
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||| |||||||||||| |||||||  ||||||||| |||||||||||||    
T  46664176 ggagaaaatttaggtacaatttcttaggtatttttcgtatagttcttaactaaa 46664229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 430
Target Start/End: Original strand, 46679289 - 46679330
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatgg 430  Q
    |||||||||||||||||||||||||| ||||||| |||||||    
T  46679289 ggagaaaacttaggtacaattccttaagtgctttgcgtatgg 46679330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 489
Target Start/End: Complemental strand, 19954012 - 19953917
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    |||| ||||||||| | | |||||||||||| | | |||||||||||||| |  | ||||||||||||||| ||||||||  | |||||||||||||    
T  19954012 aaaatttaggtacattcctttaggtgctttt-gaacggttcttaactaaaatatctatgatttcctcaaattcataatttgtttaaagtttgttata 19953917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 442
Target Start/End: Complemental strand, 42105556 - 42105501
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||| |||||||| |||||||| | |||||| |||| ||||||||||||||||||    
T  42105556 atggacaaaacttaagtacaatttcgtaggtgttttttgtatggttcttaactaaa 42105501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 50099431 - 50099485
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||| | | ||||||||| ||||||||||||||||||||| |||| ||||    
T  50099431 tggagaaaattcatgtacaattcgttaggtgcttttcgtatggtttttaattaaa 50099485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 157140 - 157087
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||  ||||||| ||||||||||||| |||| ||||||| |||||    
T  157140 ggagaaaacttatatacaatttcttaggtgcttttggtatagttcttagctaaa 157087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 13724159 - 13724106
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||| ||||||||||||||||||| || |||||||||  || |||||||||    
T  13724159 ggagaaatcttaggtacaattccttagatgtttttcgtataatttttaactaaa 13724106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 435
Target Start/End: Complemental strand, 54126696 - 54126648
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttctt 435  Q
    ||||| ||||||||||| || ||||||||||| ||||||| ||||||||    
T  54126696 atggacaaaacttaggtgcatttccttaggtgtttttcgtgtggttctt 54126648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 3e-49; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 27240924 - 27241027
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27240924 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttat 27241023  T
Q  489 atcc 492  Q
    ||||    
T  27241024 atcc 27241027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 19954911 - 19955014
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19954911 ggagaaaacttaggtacaattccttatgtgcttttcgtatagttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 19955010  T
Q  489 atcc 492  Q
    ||||    
T  19955011 atcc 19955014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 47940570 - 47940673
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  47940570 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttat 47940669  T
Q  489 atcc 492  Q
    ||||    
T  47940670 atcc 47940673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 389 - 490
Target Start/End: Complemental strand, 40647289 - 40647188
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40647289 ggagaaaacttaggtacaattccttaggtgcttttcgtatgatttttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 40647190  T
Q  489 at 490  Q
    ||    
T  40647189 at 40647188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 391 - 492
Target Start/End: Complemental strand, 5189638 - 5189537
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5189638 agaaaatttaggtacaattccttagatgcttttcgtatggttcttaactaaattcaccatgatttccttaaatccataattttctcaaagtttgttatat 5189539  T
Q  491 cc 492  Q
    ||    
T  5189538 cc 5189537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 387 - 492
Target Start/End: Original strand, 9978049 - 9978154
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    |||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9978049 atggagaaaatttaggtacaattccttatgtgcttttcgtatgattcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgtt 9978148  T
Q  487 atatcc 492  Q
    ||||||    
T  9978149 atatcc 9978154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 391 - 492
Target Start/End: Original strand, 14387017 - 14387118
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14387017 agaaaacttaggtacaattccttagatgcatttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttattatat 14387116  T
Q  491 cc 492  Q
    ||    
T  14387117 cc 14387118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 2854532 - 2854635
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  2854532 ggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttat 2854631  T
Q  489 atcc 492  Q
    ||||    
T  2854632 atcc 2854635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 23698502 - 23698605
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  23698502 ggagaaaacttaggtacaattccttagatacttttcgtatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttat 23698601  T
Q  489 atcc 492  Q
    ||||    
T  23698602 atcc 23698605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 42561295 - 42561398
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  42561295 ggagaaatcttaagtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcttcatatccataattttctcaaagtttgttat 42561394  T
Q  489 atcc 492  Q
    ||||    
T  42561395 atcc 42561398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 48954214 - 48954317
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  48954214 ggagaaaacttaggtacaattccttaggtacttttcatatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgttat 48954313  T
Q  489 atcc 492  Q
    ||||    
T  48954314 atcc 48954317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 389 - 491
Target Start/End: Original strand, 51789597 - 51789699
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  51789597 ggagaaaacttaggtacaattccttaggtgattttcgtatggtttttaactaaattcaccatgatttcctcaattccataattttctcaaagtatgttat 51789696  T
Q  489 atc 491  Q
    |||    
T  51789697 atc 51789699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 391 - 492
Target Start/End: Complemental strand, 15324796 - 15324695
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    |||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15324796 agaaaatttatgtacaattccttatgtgcttttcgtatggttcttaactaaattcactatgatttcctcaaatccataattttctcaaagtttgttatat 15324697  T
Q  491 cc 492  Q
    ||    
T  15324696 cc 15324695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 26208596 - 26208493
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  26208596 ggagaaaacttatgtataattccttaggtgcttttcgtatggttctgaactaaattcaccataatttcttcaaatccataattttctcaaagtttgttat 26208497  T
Q  489 atcc 492  Q
    ||||    
T  26208496 atcc 26208493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 390 - 492
Target Start/End: Original strand, 3607730 - 3607832
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    ||||||| ||||||| |||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3607730 gagaaaatttaggtagaatttcttaggtgctttttgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgttata 3607829  T
Q  490 tcc 492  Q
    |||    
T  3607830 tcc 3607832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 389 - 487
Target Start/End: Complemental strand, 36880682 - 36880584
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||    
T  36880682 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaataccatgatttcctcaaatccataattttctcaaagtttgtta 36880584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 387 - 492
Target Start/End: Original strand, 27926249 - 27926353
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||    
T  27926249 atggagaaaacttaggtataattccttatgtgcttttcgtatggttcttaactaaattcactgtgatttcctc-aatccataattttctcaaagtttgtt 27926347  T
Q  487 atatcc 492  Q
    ||||||    
T  27926348 atatcc 27926353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 50627302 - 50627199
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  50627302 ggagaaaacttaggtacaattccttatatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttat 50627203  T
Q  489 atcc 492  Q
    ||||    
T  50627202 atcc 50627199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 393 - 491
Target Start/End: Complemental strand, 957756 - 957658
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 491  Q
    ||||||||| ||||||| |||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  957756 aaaacttagatacaatttcttaggtgtttttcgtatgattcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttatatc 957658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 390 - 492
Target Start/End: Complemental strand, 1387948 - 1387846
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| ||||||||||||||||||| |||||    
T  1387948 gagaaaatttaggtacaattccttaggtgcttttcgtatggttcttaactaaagataccatgatttcctcaaattcataattttctcaaagtttattata 1387849  T
Q  490 tcc 492  Q
    |||    
T  1387848 tcc 1387846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 390 - 492
Target Start/End: Original strand, 19796982 - 19797084
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||   |||||||||||||||||||||||||||| |||||||||||||||    
T  19796982 gagaaaacttaggtacaatttcttaggtgcttttcgtatggtttttaactaaaaataccatgatttcctcaaatccataattttttcaaagtttgttata 19797081  T
Q  490 tcc 492  Q
    |||    
T  19797082 tcc 19797084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 418 - 492
Target Start/End: Complemental strand, 6079526 - 6079452
Alignment:
Q  418 gcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6079526 gcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 6079452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 389 - 490
Target Start/End: Original strand, 51276695 - 51276796
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||| ||||||| |||| | ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  51276695 ggagaaaatttaggtataatttcataggtgcttttcgtatggttcttaactaaattcattatgatttcctcaaatccataattttctcaaagtttattat 51276794  T
Q  489 at 490  Q
    ||    
T  51276795 at 51276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 388 - 492
Target Start/End: Original strand, 50856320 - 50856424
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    |||| |||||||||||| ||||| |||||||||||||||||| |||||| ||||||||||||| |||||||||| ||||||||||||||||| |||||||    
T  50856320 tggataaaacttaggtaaaattctttaggtgcttttcgtatgattcttagctaaattcaccattatttcctcaagtccataattttctcaaaatttgtta 50856419  T
Q  488 tatcc 492  Q
    |||||    
T  50856420 tatcc 50856424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 388 - 490
Target Start/End: Complemental strand, 27670316 - 27670213
Alignment:
Q  388 tggagaaaacttaggt-acaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||| ||    
T  27670316 tggagaaaacttagggcacaattccttatgtgcttttcgtatggtttttaactaaattcatcatgatttccttaaatccataattttctcaaagtttttt 27670217  T
Q  487 atat 490  Q
    ||||    
T  27670216 atat 27670213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 393 - 492
Target Start/End: Original strand, 27928302 - 27928400
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    ||||||||| |||||||||||| |||||||| |||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||    
T  27928302 aaaacttagatacaattccttatgtgctttttgtatggttcttaactaaattcactgtgatttcctc-aatccataattttctcaaagtttgttatatcc 27928400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 393 - 492
Target Start/End: Original strand, 49284298 - 49284397
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    ||||||||||||||||| ||||| || |||| ||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||    
T  49284298 aaaacttaggtacaatttcttagttgttttttgtatggttcttaactaaattcaccatgattttcttaaatccataattttttcaaagtttgttatatcc 49284397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 50162538 - 50162641
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||||||  |||| |||||||| |||| |||||||||| |||||| |||||||| |||||||||||||||||||||||    
T  50162538 ggagaaaacttaggtacaattccttaggtattttttgtatggtttttaattaaattcaccgtgattttctcaaatctataattttctcaaagtttgttat 50162637  T
Q  489 atcc 492  Q
    ||||    
T  50162638 atcc 50162641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 411 - 492
Target Start/End: Original strand, 4299414 - 4299495
Alignment:
Q  411 cttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    ||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4299414 cttaggtacttttcgtatggctcttaactaaattcaccattatttcctcaaatccataattttctcaaagtttgttatatcc 4299495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 388 - 491
Target Start/End: Original strand, 2125069 - 2125172
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    ||||||||| |||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||  | ||||  ||||||||||||||||||||||    
T  2125069 tggagaaaatttagttacaatttcttatgtgcttttcgtatggttcttaactaaattcaccatgatttttttaaatttataattttctcaaagtttgtta 2125168  T
Q  488 tatc 491  Q
    ||||    
T  2125169 tatc 2125172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 21930549 - 21930449
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||   ||||| | |||||||||||||||| ||||||||||||    
T  21930549 ggagaaaatttaggtacaattacttaggtgtttttcgtatggttcttaactaaattcacc---atttctttaaatccataattttcttaaagtttgttat 21930453  T
Q  489 atcc 492  Q
    ||||    
T  21930452 atcc 21930449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 411 - 491
Target Start/End: Original strand, 48645036 - 48645116
Alignment:
Q  411 cttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 491  Q
    ||||||||||||||||||| ||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||    
T  48645036 cttaggtgcttttcgtatgcttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttatatc 48645116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 393 - 492
Target Start/End: Original strand, 22338988 - 22339087
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    ||||||| |||||||||||| || |||||||||  ||||||||||||||| ||||||||||||| |||||||||| ||||||||||||| |||| |||||    
T  22338988 aaaacttgggtacaattcctaagttgcttttcgattggttcttaactaaactcaccatgatttcatcaaatccatcattttctcaaagtctgttctatcc 22339087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 388 - 489
Target Start/End: Original strand, 36007819 - 36007920
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    |||| ||||||| ||| || ||||||||||| |||| ||| |||||||||||||| |  ||||||||||||||||| |||||||||||||||||||||||    
T  36007819 tggataaaacttgggtgcatttccttaggtgtttttggtacggttcttaactaaactatccatgatttcctcaaatacataattttctcaaagtttgtta 36007918  T
Q  488 ta 489  Q
    ||    
T  36007919 ta 36007920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 5189469 - 5189522
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5189469 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 5189522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 19797152 - 19797099
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19797152 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 19797099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 49285146 - 49285093
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49285146 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 49285093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 9978222 - 9978170
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9978222 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 9978170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 389 - 456
Target Start/End: Complemental strand, 362528 - 362461
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttc 456  Q
    |||||||| ||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||    
T  362528 ggagaaaatttaggtacaattctttaggtgcttttcgtatgattcttaactaaatttaccatgatttc 362461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 387 - 442
Target Start/End: Complemental strand, 23698675 - 23698620
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23698675 atggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 23698620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 387 - 442
Target Start/End: Complemental strand, 27926425 - 27926370
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27926425 atggagaaaacttatgtacaattccttaggtgcttttcgtatggttcttaactaaa 27926370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 393 - 492
Target Start/End: Original strand, 16518302 - 16518403
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa--attcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||||||| ||||| ||||||||||||| |||||||| ||||||||  ||||||||| |||| ||||| | ||||||||||||| |||||||| |||    
T  16518302 aaaacttaggtgcaatttcttaggtgcttttggtatggtttttaactaaatattcaccataattttctcaattacataattttctcatagtttgttgtat 16518401  T
Q  491 cc 492  Q
    ||    
T  16518402 cc 16518403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 387 - 441
Target Start/End: Complemental strand, 25298020 - 25297966
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa 441  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25298020 atggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaa 25297966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 2854703 - 2854650
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2854703 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 2854650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 3607900 - 3607847
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3607900 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 3607847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 4299566 - 4299513
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4299566 ggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 4299513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 15324626 - 15324679
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15324626 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 15324679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 433 - 490
Target Start/End: Complemental strand, 29598450 - 29598393
Alignment:
Q  433 cttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  29598450 cttaactaaattcactatgatttccttaaatccataattttctcaaagtttgttatat 29598393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 42561466 - 42561413
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42561466 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 42561413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 47940742 - 47940689
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47940742 ggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 47940689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 48954385 - 48954332
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  48954385 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 48954332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 50627131 - 50627184
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50627131 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 50627184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 14387185 - 14387133
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14387185 gagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 14387133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 391 - 442
Target Start/End: Complemental strand, 50162708 - 50162657
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  50162708 agaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 50162657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 27928470 - 27928416
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  27928470 tggagaaaacttatgtacaattccttaggtgtttttcgtatggttcttaactaaa 27928416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 447
Target Start/End: Complemental strand, 29598508 - 29598450
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcac 447  Q
    |||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  29598508 ggagaaaacttaggtacaattcgttaggtactttttgtatggttcttaactaaattcac 29598450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 19955082 - 19955029
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  19955082 ggagaaaacttaggtacaattccttaggtactttttgtatggttcttaactaaa 19955029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 27241095 - 27241042
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  27241095 ggagaaaacttaggtacaattcgttaggtgctttgcgtatggttcttaactaaa 27241042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 403 - 492
Target Start/End: Original strand, 35547714 - 35547803
Alignment:
Q  403 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    ||||||| |||| ||||||||  ||||||||||||||||| ||||||| ||||| | ||||||||||||||||  ||||||| |||||||    
T  35547714 tacaatttcttatgtgctttttatatggttcttaactaaaatcaccataatttctttaaatccataattttctataagtttgatatatcc 35547803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 51789766 - 51789713
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  51789766 ggagaaaacttaggtacaattccttaaatgcttttcgtatggttcttaactaaa 51789713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 2302533 - 2302481
Alignment:
Q  430 gttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtt 482  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  2302533 gttcttaacaaaattcaccatgatttcctcaaattcataattttctcaaagtt 2302481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 51276865 - 51276813
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  51276865 gagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttagctaaa 51276813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 40647115 - 40647169
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||| ||||||||||||| |||||||||| |||||||||||||||    
T  40647115 tggagaaaacttagttacaattccttagctgcttttcgtgtggttcttaactaaa 40647169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 2125241 - 2125188
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  2125241 ggagaaaatttaggtacaatttcttaggtgcttttcgtatagttcttaactaaa 2125188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 446 - 491
Target Start/End: Complemental strand, 9895367 - 9895322
Alignment:
Q  446 accatgatttcctcaaatccataattttctcaaagtttgttatatc 491  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  9895367 accatgatttcctcaaatacataattttctcaaagtttgttatatc 9895322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 492
Target Start/End: Complemental strand, 28244119 - 28244026
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    ||||||| ||||||||| ||||  || |||| ||||  ||||||||||||||||      |||||| |||||||||||||||||||||||||||||||||    
T  28244119 aaaacttcggtacaatttcttatatgttttttgtataattcttaactaaattca------tttccttaaatccataattttctcaaagtttgttatatcc 28244026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 421 - 489
Target Start/End: Original strand, 39015225 - 39015293
Alignment:
Q  421 tttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    ||||||||||||||| | | || | ||||||||||| ||||||||||||||||||||||||| ||||||    
T  39015225 tttcgtatggttctttaattaactaaccatgatttcttcaaatccataattttctcaaagttcgttata 39015293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 442
Target Start/End: Original strand, 21930372 - 21930433
Alignment:
Q  381 tcgaagatggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||| ||||||||| || || ||||||||||||| || |||||||||||||||||||||||    
T  21930372 tcgaaaatggagaaacctcagttacaattccttagttgtttttcgtatggttcttaactaaa 21930433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 22339151 - 22339102
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||||||||    
T  22339151 aaaacttaggtgcaattctttaggtgcttttcatatggttcttaactaaa 22339102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 436
Target Start/End: Original strand, 25297921 - 25297968
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttctta 436  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  25297921 tggagaaaacttag-tacaattccttaggtgcttttcgtatgattctta 25297968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 492
Target Start/End: Original strand, 28431733 - 28431805
Alignment:
Q  420 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    |||||||||| || ||||||||||||| ||||||||| ||||||| |||||||| | ||| ||| ||||||||    
T  28431733 ttttcgtatgatttttaactaaattcatcatgatttcttcaaatctataatttttttaaaatttattatatcc 28431805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 442
Target Start/End: Original strand, 6079382 - 6079437
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||| |||||||||||||||| || |||||||| ||||||| ||||||    
T  6079382 atggagaaaactcaggtacaattccttagatgtttttcgtacggttcttcactaaa 6079437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 1387780 - 1387831
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  1387780 ggagaaaacttac-tacaattccttag-tgcttttcgtatggttcttaactaaa 1387831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 491
Target Start/End: Original strand, 5059568 - 5059664
Alignment:
Q  397 cttaggtacaattccttaggtgcttttcgtatgg--ttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 491  Q
    |||||||  ||||| ||| |||||||||||||    ||||||| |||||| ||||| ||||  | |||||||||||||| |||||||||||||||||    
T  5059568 cttaggtggaattctttatgtgcttttcgtatataattcttaattaaatttaccataatttttttaaatccataattttatcaaagtttgttatatc 5059664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 9895253 - 9895306
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||| ||||||| ||||  |||||| ||||||||||||||||||||||||    
T  9895253 ggagaaaatttaggtataattttttaggtacttttcgtatggttcttaactaaa 9895306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 36880289 - 36880342
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||  ||| ||| |||||||||||||| ||||||||    
T  36880289 ggagaaaacttaggtacaattttttaagtgtttttcgtatggttcctaactaaa 36880342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 449 - 489
Target Start/End: Original strand, 18651310 - 18651350
Alignment:
Q  449 atgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  18651310 atgatttccccaaatccataattttctcaaaatttgttata 18651350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 492
Target Start/End: Original strand, 48958233 - 48958309
Alignment:
Q  415 ggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    |||| |||| ||||| ||||| | |||||||| ||| ||||| | |||| |||||||||||| |||||||||||||||    
T  48958233 ggtgtttttggtatgattcttgattaaattcatcataatttctttaaatacataattttctc-aagtttgttatatcc 48958309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 16518468 - 16518424
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 437  Q
    ||||||||||| |||||| |||| | |||||||||||||||||||    
T  16518468 aaaacttaggtgcaattctttagatacttttcgtatggttcttaa 16518424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 98; Significance: 5e-48; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 387 - 492
Target Start/End: Complemental strand, 46007 - 45902
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  46007 atggagaaaacttaggtacaattccttaggtgcttttcttatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgtt 45908  T
Q  487 atatcc 492  Q
    ||||||    
T  45907 atatcc 45902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 45834 - 45887
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45834 ggagaaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 45887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 5e-48; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 387 - 492
Target Start/End: Complemental strand, 45408798 - 45408693
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  45408798 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaatttaccatgatttcctcaaatccataattttctcaaagtttgtt 45408699  T
Q  487 atatcc 492  Q
    ||||||    
T  45408698 atatcc 45408693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 1923980 - 1924083
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1923980 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcgaatccataattttctcaaagtttgttat 1924079  T
Q  489 atcc 492  Q
    ||||    
T  1924080 atcc 1924083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 24101832 - 24101935
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  24101832 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaatataccatgatttcctcaaatccataattttctcaaagtttgttat 24101931  T
Q  489 atcc 492  Q
    ||||    
T  24101932 atcc 24101935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 388 - 492
Target Start/End: Complemental strand, 2818838 - 2818734
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  2818838 tggagaaaacttaggtacaattctttaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgata 2818739  T
Q  488 tatcc 492  Q
    |||||    
T  2818738 tatcc 2818734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 7737236 - 7737133
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  7737236 ggagaaaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaatttaccatgatttcctcaaagccataattttctcaaagtttgttat 7737137  T
Q  489 atcc 492  Q
    ||||    
T  7737136 atcc 7737133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 27920743 - 27920640
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27920743 ggagaaaacttaggtacaattttttagctgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttttcaaagtttgttat 27920644  T
Q  489 atcc 492  Q
    ||||    
T  27920643 atcc 27920640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 34490627 - 34490524
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||||||||||||||||||    
T  34490627 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaaaataccatgatttcctcagatccataattttctcaaagtttgttat 34490528  T
Q  489 atcc 492  Q
    ||||    
T  34490527 atcc 34490524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 388 - 492
Target Start/End: Original strand, 9281346 - 9281450
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    |||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  9281346 tggagaaaactttggtacaattccttaggtacttttcatatggttcttaactaaattcactatgatttcctcaaattcataattttctcaaagtttgtta 9281445  T
Q  488 tatcc 492  Q
    |||||    
T  9281446 tatcc 9281450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 3117047 - 3116944
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||    
T  3117047 ggagaaaacttaggtacaattccatagctgcttttcgtatggttcttaactaaattcattatgattttctcaaatccataattttctcaaagtttgttat 3116948  T
Q  489 atcc 492  Q
    ||||    
T  3116947 atcc 3116944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 43476117 - 43476014
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  43476117 ggagaaaatttaggtataattccttaggtgtttttcgtatggttcttaactaaattcaccatgatttcctcaaattcataattttctcaaagtttattat 43476018  T
Q  489 atcc 492  Q
    ||||    
T  43476017 atcc 43476014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 387 - 492
Target Start/End: Complemental strand, 16705906 - 16705801
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||||||| ||||||||||||    
T  16705906 atggagaaaatttaggtacaattccttaggtgcttttcgtatggtttttaactaaattcactatgattttctcaaagccataattttatcaaagtttgtt 16705807  T
Q  487 atatcc 492  Q
    ||||||    
T  16705806 atatcc 16705801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 388 - 492
Target Start/End: Original strand, 12850541 - 12850645
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    |||| |||| |||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12850541 tggataaaatttaggtacaattccttaggtactttttgtatggtttttaactaaatttaccatgatttcctcaaatccataattttctcaaagtttgtta 12850640  T
Q  488 tatcc 492  Q
    |||||    
T  12850641 tatcc 12850645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 6605905 - 6605803
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  6605905 ggagaaaacttaggtacaattctttaggtgctttttgtatggttctta-ctaaatttaccatgatttcctcaaatgcataattttctcaaagtttgttat 6605807  T
Q  489 atcc 492  Q
    ||||    
T  6605806 atcc 6605803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 22269893 - 22269790
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  22269893 ggagaaaacttacgtacaattccttagatgcttttcgtatggttcttaactaaaaaaaacatgatttcctcaaatccataattttctcaaagtttgttat 22269794  T
Q  489 atcc 492  Q
    ||||    
T  22269793 atcc 22269790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 42713777 - 42713880
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||| |||| || ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  42713777 ggagaaaatttagatataattccttaggtgtttttcgtatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttattat 42713876  T
Q  489 atcc 492  Q
    ||||    
T  42713877 atcc 42713880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 389 - 491
Target Start/End: Original strand, 9933570 - 9933671
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  9933570 ggagaaaacttaggtacaattcattag-tgcttttcctatggttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttattat 9933668  T
Q  489 atc 491  Q
    |||    
T  9933669 atc 9933671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 391 - 492
Target Start/End: Complemental strand, 34456054 - 34455953
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    |||||| |||||||||||| |||| ||| |||||||||||||| ||| |||||||| ||| ||||||||||||| |||||||||||||||||||||||||    
T  34456054 agaaaatttaggtacaatttcttatgtgtttttcgtatggttcctaattaaattcatcataatttcctcaaatctataattttctcaaagtttgttatat 34455955  T
Q  491 cc 492  Q
    ||    
T  34455954 cc 34455953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 412 - 491
Target Start/End: Original strand, 9850781 - 9850860
Alignment:
Q  412 ttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 491  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||||| |||||||||||    
T  9850781 ttaggtgcttttcgtatggttcttaactaaatttaccatgattttcttaaatccataattttctcaaaatttgttatatc 9850860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 20893055 - 20892953
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||| || |||||||||||||||||||||||| ||||||||||||   || || ||||| |||||||||||||||||||||||||||||||    
T  20893055 ggagaaaacttag-tataattccttaggtgcttttcgtatgattcttaactaaaaatacaataatttcatcaaatccataattttctcaaagtttgttat 20892957  T
Q  489 atcc 492  Q
    ||||    
T  20892956 atcc 20892953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 29229361 - 29229467
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgctttt--cgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctc-aaagtttgt 485  Q
    ||||||||||||||||||||| |||| ||||||||  |||||| |||||||||| ||||| ||||||||||||||||||||||||||||| ||||||| |    
T  29229361 ggagaaaacttaggtacaattacttatgtgcttttttcgtatgattcttaactatattcatcatgatttcctcaaatccataattttctcaaaagtttat 29229460  T
Q  486 tatatcc 492  Q
    |||||||    
T  29229461 tatatcc 29229467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 29342661 - 29342767
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgctttt--cgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctc-aaagtttgt 485  Q
    ||||||||||||||||||||| |||| ||||||||  |||||| |||||||||| ||||| ||||||||||||||||||||||||||||| ||||||| |    
T  29342661 ggagaaaacttaggtacaattacttatgtgcttttttcgtatgattcttaactatattcatcatgatttcctcaaatccataattttctcaaaagtttat 29342760  T
Q  486 tatatcc 492  Q
    |||||||    
T  29342761 tatatcc 29342767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 419 - 492
Target Start/End: Complemental strand, 23836018 - 23835945
Alignment:
Q  419 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23836018 cttttcgtatggtttttaacaaaatttaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 23835945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 396 - 492
Target Start/End: Complemental strand, 7116534 - 7116438
Alignment:
Q  396 acttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    |||||||||||||| ||||| || |||||||||||||||||| |||||| ||||| ||||| ||||||||||||||||||||||| ||||| |||||    
T  7116534 acttaggtacaatttcttagatgtttttcgtatggttcttaaataaatttaccataatttcatcaaatccataattttctcaaagattgttctatcc 7116438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 390 - 455
Target Start/End: Complemental strand, 10553051 - 10552986
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattt 455  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  10553051 gagaaaacttaggtacaattccttaggtgtttttcgtatgattcttaactaaattcaccatgattt 10552986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 395 - 490
Target Start/End: Complemental strand, 40362647 - 40362553
Alignment:
Q  395 aacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||||||||| ||| |   || |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||    
T  40362647 aacttaggtacaactccgtgtatgtttttcgtatggttcttaactaaattcaccatgattttctcaaat-cataattttctcatagtttgttatat 40362553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 16705733 - 16705786
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16705733 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 16705786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 45 - 159
Target Start/End: Complemental strand, 32180534 - 32180412
Alignment:
Q  45 atcttacctctttgctcgcaaatcttattttttcatatcagagaattcatgatttcta-------ccatttgattttttgaacaaaggatgagttgt-ta 136  Q
    ||||||||||| ||||| |||||||||||||| |||||| |||||||| |||||||||       |||||||| ||| |||||||||||||||||||  |    
T  32180534 atcttacctctctgctcacaaatcttatttttccatatctgagaattcctgatttctattttcttccatttgaatttgtgaacaaaggatgagttgtgaa 32180435  T
Q  137 tttgccaattattgtaaaagaat 159  Q
    ||||||||| |||||||||||||    
T  32180434 tttgccaataattgtaaaagaat 32180412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 387 - 442
Target Start/End: Complemental strand, 24102005 - 24101950
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24102005 atggagaaaacttaagtacaattccttaggtgcttttcgtatggttcttaactaaa 24101950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 387 - 442
Target Start/End: Original strand, 34455883 - 34455938
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34455883 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaattaaa 34455938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 1924152 - 1924099
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1924152 ggagaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaa 1924099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 9281518 - 9281465
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9281518 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 9281465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 20892884 - 20892937
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20892884 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 20892937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 23835876 - 23835929
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23835876 ggagaaaacttatgtacaattccttaggtgcttttcgtatggttcttaactaaa 23835929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 446
Target Start/End: Complemental strand, 43858605 - 43858548
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattca 446  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43858605 ggagaaaatttaggtacaattccttaggtacttttcgtatggttcttaactaaattca 43858548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 3116876 - 3116929
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  3116876 ggagaaaacttaggtacaattcttttggtgcttttcgtatggttcttaactaaa 3116929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 9933740 - 9933687
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  9933740 ggagaaaatttaggtacaatttcttaggtgcttttcgtatggttcttaactaaa 9933687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 34490456 - 34490509
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  34490456 ggagaaaacttaggtacaattctttaggtgtttttcgtatggttcttaactaaa 34490509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 45408625 - 45408678
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  45408625 ggagaaaacttaggtacaattccttaggtgttttttgtatggttcttaactaaa 45408678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 442
Target Start/End: Original strand, 2818671 - 2818719
Alignment:
Q  394 aaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2818671 aaacttaggtacaattccttaggtgcttttcgtatgattcttaactaaa 2818719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 387 - 442
Target Start/End: Complemental strand, 12850715 - 12850660
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||| |||||||| || ||||||||||||||||||||||||||    
T  12850715 atggagaaaacttaggtccaattcctcagatgcttttcgtatggttcttaactaaa 12850660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 403 - 490
Target Start/End: Original strand, 17500020 - 17500107
Alignment:
Q  403 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||| |||| ||| ||||||||||||||||||||||||||||  | || | ||||||||| | ||||| ||||||||||||||||    
T  17500020 tacaatttcttatgtgtttttcgtatggttcttaactaaattcacggtaatcttctcaaatcctttattttttcaaagtttgttatat 17500107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 387 - 442
Target Start/End: Original strand, 22269720 - 22269775
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||||||||    
T  22269720 atggagaaaacttaggtacaattccttaggtgtttttcgtatgatttttaactaaa 22269775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 403 - 492
Target Start/End: Original strand, 39242997 - 39243086
Alignment:
Q  403 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    ||||||| |||||||  |||||||||| |||||||||||||| | | ||||||| ||||||  || ||||| ||||||||||||||||||    
T  39242997 tacaatttcttaggtatttttcgtatgattcttaactaaatttatcgtgatttcatcaaatttatgattttatcaaagtttgttatatcc 39243086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 7737065 - 7737117
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||| ||||||||||||| ||||| ||||||||||||    
T  7737065 gagaaaacttaggtacaatttcttaggtgcttttggtatgattcttaactaaa 7737117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 387 - 441
Target Start/End: Complemental strand, 8111746 - 8111692
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa 441  Q
    ||||||||||||||| ||||||| ||||||| ||||| |||||||||||||||||    
T  8111746 atggagaaaacttagttacaatttcttaggtcctttttgtatggttcttaactaa 8111692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 27920573 - 27920625
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  27920573 ggagaaaacttag-tacaatttcttaggtgcttttcgtatgggtcttaactaaa 27920625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 42713949 - 42713896
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||| |||| |||||||||| ||| ||||||||||||    
T  42713949 ggagaaaacttaggtacaatttcttaagtgcttttcgcatgattcttaactaaa 42713896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 389 - 428
Target Start/End: Original strand, 6605738 - 6605777
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtat 428  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  6605738 ggagaaaacttaggtacaattccttatgtgcttttcgtat 6605777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 442
Target Start/End: Original strand, 7116368 - 7116423
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||| |||||||||||||||||| |||| | |||||||||||||||| |||||||    
T  7116368 atggacaaaacttaggtacaattctttagatacttttcgtatggttctcaactaaa 7116423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 442
Target Start/End: Complemental strand, 29229536 - 29229482
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||| |||||||| |||| | ||||||||||||||||||||||||    
T  29229536 atggagaaaacttag-tacaattctttagttacttttcgtatggttcttaactaaa 29229482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 387 - 442
Target Start/End: Complemental strand, 29342836 - 29342782
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||| |||||||| |||| | ||||||||||||||||||||||||    
T  29342836 atggagaaaacttag-tacaattctttagttacttttcgtatggttcttaactaaa 29342782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 462
Target Start/End: Original strand, 17434728 - 17434770
Alignment:
Q  420 ttttcgtatggttcttaactaaattcaccatgatttcctcaaa 462  Q
    ||||||||||||||||||||||||||||||| |||| ||||||    
T  17434728 ttttcgtatggttcttaactaaattcaccataattttctcaaa 17434770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 490
Target Start/End: Complemental strand, 25095898 - 25095801
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcacca-tgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    ||||||||| |||||||||||| ||| ||||| |||  |||||||||||||| |  | ||||||| |||||| | ||||||| ||||||||||||||||    
T  25095898 aaaacttag-tacaattccttacgtgtttttcatataattcttaactaaatttaaaaatgatttcttcaaattcttaattttttcaaagtttgttatat 25095801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 486
Target Start/End: Complemental strand, 1699952 - 1699853
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    ||||| |||||| |||| || || |||| ||| ||||  ||| ||||||||||||||| |  ||||| |||||||| | ||| |||||||||||||||||    
T  1699952 atggataaaactaaggtgcattttcttaagtgttttttatatagttcttaactaaattaattatgatgtcctcaaaactatatttttctcaaagtttgtt 1699853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 442
Target Start/End: Complemental strand, 9850923 - 9850875
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||    ||| |||||||||||||||||||||||    
T  9850923 gagaaaacttaggtacaattcc----gtgtttttcgtatggttcttaactaaa 9850875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 442
Target Start/End: Original strand, 43475946 - 43475997
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||| ||||||||||| ||||| ||||||||||||| | |||||||    
T  43475946 agaaaacttatgtacaattcctcaggtgattttcgtatggttttaaactaaa 43475997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 443
Target Start/End: Complemental strand, 17434840 - 17434798
Alignment:
Q  401 ggtacaattccttaggtgcttttcgtatggttcttaactaaat 443  Q
    ||||||||||||||| || |||||||||| |||||||||||||    
T  17434840 ggtacaattccttagatgtttttcgtatgattcttaactaaat 17434798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 464 - 492
Target Start/End: Original strand, 17434755 - 17434783
Alignment:
Q  464 ccataattttctcaaagtttgttatatcc 492  Q
    |||||||||||||||||||||||||||||    
T  17434755 ccataattttctcaaagtttgttatatcc 17434783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 3e-46; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 389 - 491
Target Start/End: Complemental strand, 20476602 - 20476500
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  20476602 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaaatttgttat 20476503  T
Q  489 atc 491  Q
    |||    
T  20476502 atc 20476500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 33629345 - 33629448
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  33629345 ggagaaaacttaggtacaattccttatgtgcttttggtatggttcttaactaaattcactatgattttctcaaatccataattttctcaaagtttgttat 33629444  T
Q  489 atcc 492  Q
    ||||    
T  33629445 atcc 33629448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 384 - 492
Target Start/End: Complemental strand, 1138735 - 1138627
Alignment:
Q  384 aagatggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagttt 483  Q
    |||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  1138735 aagaaggagaaaacttaggtacaattccatagctgcttttcgtatggttcttaactaaattcattatgattttctcaaatccataattttctcaaagttt 1138636  T
Q  484 gttatatcc 492  Q
    |||||||||    
T  1138635 gttatatcc 1138627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 387 - 491
Target Start/End: Complemental strand, 16473128 - 16473024
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||    
T  16473128 atggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgtt 16473029  T
Q  487 atatc 491  Q
    |||||    
T  16473028 atatc 16473024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 388 - 491
Target Start/End: Complemental strand, 15856015 - 15855912
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||    
T  15856015 tggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgtta 15855916  T
Q  488 tatc 491  Q
    ||||    
T  15855915 tatc 15855912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 389 - 491
Target Start/End: Original strand, 35420612 - 35420714
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||    
T  35420612 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaaaatatcatgatttcctcaaatccataattttctcaaagtttgttat 35420711  T
Q  489 atc 491  Q
    |||    
T  35420712 atc 35420714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 392 - 492
Target Start/End: Complemental strand, 12744994 - 12744894
Alignment:
Q  392 gaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 491  Q
    ||||||||||||||||||||||||||| |||||||||| || || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12744994 gaaaacttaggtacaattccttaggtgtttttcgtatgatttttgactaaattcaccatgatttcctcaaattcataattttctcaaagtttgttatatc 12744895  T
Q  492 c 492  Q
    |    
T  12744894 c 12744894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 4266153 - 4266050
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||     
T  4266153 ggagaaaacttcggtacaattccttaggtgtttttcgtatggttcttaactaaattcaccgtgatttcttcaaatccataattttcttaaagtttgttac 4266054  T
Q  489 atcc 492  Q
    ||||    
T  4266053 atcc 4266050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 388 - 491
Target Start/End: Original strand, 32623214 - 32623317
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||||||    
T  32623214 tggaaaaaacttaggtacaattccttaggtgtttttcgtatggttcttaactaaattcactatgatttctgtaaatccataattttctcaaagtttgtta 32623313  T
Q  488 tatc 491  Q
    ||||    
T  32623314 tatc 32623317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 389 - 491
Target Start/End: Original strand, 13754291 - 13754393
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||    
T  13754291 ggagaaaacttaggtacaattccttatgtgtttttcgtatgattcttaactaaattcaccataatttcctcaaattcataattttctcaaagtttgctat 13754390  T
Q  489 atc 491  Q
    |||    
T  13754391 atc 13754393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 388 - 476
Target Start/End: Original strand, 21591212 - 21591300
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctc 476  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  21591212 tggagaaaacttaggtacaattccttaagtgcttttcgtatggttgtgaactaaattcaccatgatttcctcaaatccataattttctc 21591300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 388 - 476
Target Start/End: Original strand, 21595329 - 21595417
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctc 476  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||    
T  21595329 tggagaaaacttaggtacaattccttaagtgcttttcgtatggttgtgaactaaattcaccatgatttcctcaaatccataattttctc 21595417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 392 - 491
Target Start/End: Complemental strand, 12808079 - 12807980
Alignment:
Q  392 gaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 491  Q
    ||||||||||||||||||||||| ||| |||||||||| ||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  12808079 gaaaacttaggtacaattccttaagtgtttttcgtatgattcttgactaaattcaccatgatttccttaaatccataattttttcaaagtttgttatatc 12807980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 389 - 492
Target Start/End: Original strand, 21259730 - 21259833
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  21259730 ggagaaaacttacgtacaattctttatgtgcttttcgtatggttcttagttaaattcaccatgatttcctcaaaatcataattttctcaaagtttgttat 21259829  T
Q  489 atcc 492  Q
    ||||    
T  21259830 atcc 21259833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 43539278 - 43539175
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||| | |||||| || |||||||||||||||||||||||||||||    
T  43539278 ggagaaaatttaggtacaattccttaggtgtttttcgtatggtccttaactaaattcatcgtgattttcttaaatccataattttctcaaagtttgttat 43539179  T
Q  489 atcc 492  Q
    ||||    
T  43539178 atcc 43539175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 389 - 489
Target Start/End: Original strand, 37552308 - 37552408
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||||||||||||||||| ||  |||||||| ||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  37552308 ggagaaaacttaggtacaattcattccgtgctttttgtacggttcttaactaaattcaccatgacttcctcaaattcataattttctcaaagtttgttat 37552407  T
Q  489 a 489  Q
    |    
T  37552408 a 37552408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 403 - 492
Target Start/End: Complemental strand, 21262100 - 21262011
Alignment:
Q  403 tacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    |||||||||||||  |||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  21262100 tacaattccttagcagctttttgtatggttcttaactaaattcatcatgatttcctcaaatccacaattttctcaaagtttgttatatcc 21262011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 393 - 492
Target Start/End: Complemental strand, 19976429 - 19976330
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    |||| ||||||||||||||||||||||||||||||| ||| || | |||||| |||||||||||||||||||||||||||||||||||||| | ||||||    
T  19976429 aaaatttaggtacaattccttaggtgcttttcgtatagttattgattaaatttaccatgatttcctcaaatccataattttctcaaagtttatcatatcc 19976330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 389 - 490
Target Start/End: Original strand, 780794 - 780895
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||| ||||||| |||||||||| | |||||||||||  |||| | |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  780794 ggagaaaagttaggtagaattccttagattcttttcgtatgactcttgattaaattcaccatgatttccttaaatccataattttcttaaagtttgttat 780893  T
Q  489 at 490  Q
    ||    
T  780894 at 780895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 388 - 492
Target Start/End: Original strand, 1456022 - 1456125
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    |||||||||||| ||||||||||||||  |||||||  |||||||| |||||||||||||  | |||| |||||||||||||||||||||||||||||||    
T  1456022 tggagaaaactt-ggtacaattccttacctgctttttatatggttcataactaaattcactgtaattttctcaaatccataattttctcaaagtttgtta 1456120  T
Q  488 tatcc 492  Q
    |||||    
T  1456121 tatcc 1456125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 425 - 492
Target Start/End: Original strand, 24397282 - 24397348
Alignment:
Q  425 gtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24397282 gtatggttcttaactaaattcac-atgatttcctcaaatccataattttctcaaagtttgttatatcc 24397348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 401 - 475
Target Start/End: Complemental strand, 2529140 - 2529066
Alignment:
Q  401 ggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttct 475  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  2529140 ggtacaatttcttaggtgcttttcgtgtggttcttaactaaattcaccgtgatttccttaaatccataattttct 2529066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 419 - 489
Target Start/End: Original strand, 37655182 - 37655252
Alignment:
Q  419 cttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    ||||| ||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  37655182 ctttttgtacggttcttaactaaattcaccatgacttcctcaaattcataattttctcaaagtttgttata 37655252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 387 - 462
Target Start/End: Complemental strand, 2268778 - 2268703
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaa 462  Q
    |||||||||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||  |||||||||||||    
T  2268778 atggagaaaacttaggtataatttcttagatgctttttgtatggttcttaactaaattcactgtgatttcctcaaa 2268703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 391 - 442
Target Start/End: Complemental strand, 24397415 - 24397364
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24397415 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 24397364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 15855843 - 15855896
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15855843 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 15855896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 35420783 - 35420730
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35420783 ggagaaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 35420730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 1138559 - 1138612
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  1138559 ggagaaaacttaggtacaattcttttggtgcttttcgtatggttcttaactaaa 1138612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 4265982 - 4266035
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  4265982 ggagaaaacttaggtacaatttcttaggtgtttttcgtatggttcttaactaaa 4266035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 8364797 - 8364748
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8364797 aaaacttaggtacaattccttaggtgctttttgtatggttcttaactaaa 8364748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 16472959 - 16473008
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16472959 aaaacttaggtacaattccttagatgcttttcgtatggttcttaactaaa 16473008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 393 - 490
Target Start/End: Complemental strand, 35807102 - 35807005
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    |||| ||||||| |||| ||||| || |||| |||||||||| | |||||||||||||||||| ||||||||  ||||||| | ||||||||||||||    
T  35807102 aaaatttaggtaaaatttcttagatgatttttgtatggttctaacctaaattcaccatgattttctcaaatctttaatttttttaaagtttgttatat 35807005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 492
Target Start/End: Complemental strand, 18236608 - 18236536
Alignment:
Q  420 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    ||||||||||||||||||||||||||  | |||||| || |||| ||||||||| ||||||||||||||||||    
T  18236608 ttttcgtatggttcttaactaaattcgtcgtgattttcttaaatacataattttttcaaagtttgttatatcc 18236536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 387 - 442
Target Start/End: Complemental strand, 1164969 - 1164914
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||    
T  1164969 atggagaaaatttaggtacaattccttagctgcttttcgtatggttcttaattaaa 1164914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 391 - 442
Target Start/End: Complemental strand, 2255631 - 2255580
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  2255631 agaaaacttaggtacaattctttaggtgcttttcgtgtggttcttaactaaa 2255580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 393 - 491
Target Start/End: Original strand, 35276295 - 35276394
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttc-gtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatc 491  Q
    ||||||||| ||||||  |||||||| ||||  ||||||||  |||||||||| ||||||||||  |||||||||||||||||| ||||||| |||||||    
T  35276295 aaaacttagttacaataacttaggtgtttttttgtatggtttataactaaatttaccatgattttatcaaatccataattttcttaaagtttattatatc 35276394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 393 - 455
Target Start/End: Complemental strand, 10132421 - 10132359
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgattt 455  Q
    ||||||||| |||||||||||| ||| |||| ||||||||||||||||||||||||| |||||    
T  10132421 aaaacttagatacaattccttatgtgttttttgtatggttcttaactaaattcaccacgattt 10132359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 427 - 488
Target Start/End: Original strand, 8364668 - 8364729
Alignment:
Q  427 atggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||||| || ||||  |||||| ||||||||||||||||    
T  8364668 atggttcttaactaaattcaccatgattttcttaaatttataattctctcaaagtttgttat 8364729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 20476431 - 20476484
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||  ||| ||||||||||||||||||||||||||    
T  20476431 ggagaaaacttaggtacaattctctagatgcttttcgtatggttcttaactaaa 20476484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 21259901 - 21259848
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  21259901 ggagaaaatttaggtacaattccttaggtacttttcttatggttcttaactaaa 21259848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 780959 - 780915
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 437  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  780959 aaaacttaggtacaatttcttaggtgcttttcgtatggttcttaa 780915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 482
Target Start/End: Original strand, 1384331 - 1384421
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtt 482  Q
    |||||| ||||||| |||| |||||||| || || ||| ||| ||||||||||| |  |||||||||||||||| |||||||||||||||||    
T  1384331 agaaaatttaggtaaaatttcttaggtg-ttatcatatagtttttaactaaatttattatgatttcctcaaatctataattttctcaaagtt 1384421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 442
Target Start/End: Complemental strand, 13754464 - 13754409
Alignment:
Q  387 atggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||| ||| |||||||| |||||||| |||||||||||||||||||||||    
T  13754464 atggagaaaatttatgtacaattacttaggtgtttttcgtatggttcttaactaaa 13754409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 389 - 432
Target Start/End: Complemental strand, 17583410 - 17583367
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggtt 432  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  17583410 ggagaaaacttaggtacaatttcttaggtgcttttcgtatggtt 17583367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 451
Target Start/End: Complemental strand, 4913316 - 4913258
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatg 451  Q
    |||||||| |||||||| |||||||| |||| |||||||||||||||||||||| ||||    
T  4913316 aaaacttacgtacaatttcttaggtgttttttgtatggttcttaactaaattcatcatg 4913258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 411 - 492
Target Start/End: Complemental strand, 5144576 - 5144495
Alignment:
Q  411 cttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    |||||||| ||||| |||| || ||||||||||||| ||||||||| | |||| |||||||||||| ||| || ||||||||    
T  5144576 cttaggtgtttttcctatgatttttaactaaattcatcatgatttctttaaattcataattttctctaaggttattatatcc 5144495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 392 - 441
Target Start/End: Complemental strand, 25751619 - 25751570
Alignment:
Q  392 gaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaa 441  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||||    
T  25751619 gaaaacttaggtacaattttttaggtgcttttcgtgtggttcttaactaa 25751570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 33629518 - 33629465
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||| |||||||||||||||||| || |||||||||| ||||||||||||    
T  33629518 ggagaaaatttaggtacaattccttagatgtttttcgtatgattcttaactaaa 33629465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 437
Target Start/End: Original strand, 29141805 - 29141853
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 437  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  29141805 ggagaaaacttagatacaattgcttaggtgtttttcgtatggttcttaa 29141853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 2268171 - 2268225
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||| ||||||||||||||||| ||| |||| ||||||||||||| ||||    
T  2268171 tggagaaaaattaggtacaattccttaagtgttttttgtatggttcttaattaaa 2268225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 442
Target Start/End: Original strand, 20464014 - 20464052
Alignment:
Q  404 acaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  20464014 acaattccttaggtgctttttgtatggttcttaactaaa 20464052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 473
Target Start/End: Complemental strand, 28056245 - 28056179
Alignment:
Q  407 attccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataatttt 473  Q
    ||||||| |||  |||| |||||||||||||||||||| | |||||||| || ||||||||||||||    
T  28056245 attcctttggtattttttgtatggttcttaactaaatttatcatgattttcttaaatccataatttt 28056179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 35806939 - 35806988
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||| ||| ||||||||| ||||||||||||| |||||||||||||||||    
T  35806939 aaaatttaagtacaattctttaggtgcttttcatatggttcttaactaaa 35806988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 437
Target Start/End: Complemental strand, 29141907 - 29141863
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaa 437  Q
    |||| |||||||||| ||| |||||||||||||||||||||||||    
T  29141907 aaaaattaggtacaactccataggtgcttttcgtatggttcttaa 29141863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 451 - 490
Target Start/End: Complemental strand, 735385 - 735346
Alignment:
Q  451 gatttcctcaaatccataattttctcaaagtttgttatat 490  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  735385 gatttcatcaaattcataattttctcaaagtttgttatat 735346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 448 - 486
Target Start/End: Original strand, 34513477 - 34513515
Alignment:
Q  448 catgatttcctcaaatccataattttctcaaagtttgtt 486  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  34513477 catgatttcttcaaacccataattttctcaaagtttgtt 34513515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 12807912 - 12807964
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||  ||||||| |||||||| ||||||||||||| |||||||||    
T  12807912 ggagaaaacttaa-tacaatttcttaggtgtttttcgtatggtttttaactaaa 12807964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 18236470 - 18236519
Alignment:
Q  393 aaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||| ||||| |||||||| |||| |||||| |||||    
T  18236470 aaaacttaggtacaatttcttagctgcttttcctatgattcttagctaaa 18236519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 449 - 489
Target Start/End: Complemental strand, 2538507 - 2538467
Alignment:
Q  449 atgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    |||||||  |||||||||||||||||||| |||||||||||    
T  2538507 atgattttttcaaatccataattttctcagagtttgttata 2538467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 441
Target Start/End: Complemental strand, 10499979 - 10499947
Alignment:
Q  409 tccttaggtgcttttcgtatggttcttaactaa 441  Q
    |||||||||| ||||||||||||||||||||||    
T  10499979 tccttaggtgtttttcgtatggttcttaactaa 10499947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 476
Target Start/End: Complemental strand, 10500217 - 10500161
Alignment:
Q  420 ttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctc 476  Q
    |||||||||| |||||||||||||   || |||||||||||||| |||||| |||||    
T  10500217 ttttcgtatgattcttaactaaataatccttgatttcctcaaatacataatgttctc 10500161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 457 - 489
Target Start/End: Original strand, 12257582 - 12257614
Alignment:
Q  457 ctcaaatccataattttctcaaagtttgttata 489  Q
    ||||||||||||||||| |||||||||||||||    
T  12257582 ctcaaatccataattttttcaaagtttgttata 12257614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 7257 - 7154
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7257 ggagaaaatttaggtacgattccttaggtgcttttcgtatggttcttaactaaattcatcatgatttcctcaaatccataattttctcaaagtttgttat 7158  T
Q  489 atcc 492  Q
    ||||    
T  7157 atcc 7154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 7086 - 7139
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  7086 ggagaaaatttaggtacaattccttaggtgtttttcgtatgattcttaactaaa 7139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 390 - 492
Target Start/End: Complemental strand, 48296 - 48194
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    |||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  48296 gagaaaacttagatacaattccttagatgcttttcgtatagttcttaactaaattcaccatgattttctcaaatccataattttctcaaagtttgttata 48197  T
Q  490 tcc 492  Q
    |||    
T  48196 tcc 48194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 84; Significance: 1e-39; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 389 - 492
Target Start/End: Complemental strand, 51234 - 51131
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||    
T  51234 ggagaaaacttaggtacaattccttaggtacttttcatatggttcttaactaaattcactatgatttccttaaattcataattttctcaaagtttgttat 51135  T
Q  489 atcc 492  Q
    ||||    
T  51134 atcc 51131  T

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Target: scaffold0107; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 51063 - 51116
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  51063 ggagaaaacttaggtacaattccttaggtccttttcgtatggttcttaactaaa 51116  T

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Target: scaffold0163 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 389 - 491
Target Start/End: Original strand, 1939 - 2041
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttat 488  Q
    |||||||| ||||||| ||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1939 ggagaaaatttaggtataattgtttaggtgctttttgtatggttcttaactaaattcaccatgatttcctcaaatccataattttcacaaagtttgttat 2038  T
Q  489 atc 491  Q
    |||    
T  2039 atc 2041  T

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Target: scaffold0163; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 2111 - 2058
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  2111 ggagaaaacttaggtacaattccttaggtgctttttatatggttcttaactaaa 2058  T

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Target: scaffold0653 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 388 - 492
Target Start/End: Original strand, 3392 - 3496
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgtta 487  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||||||| |||||||||||||||||||||||||  |||||||| |||||||||||||    
T  3392 tggagaaaacttaggtacaattcatttggtgctttttgtatggttcttaattaaattcaccatgatttcctcaaatttataattttatcaaagtttgtta 3491  T
Q  488 tatcc 492  Q
    |||||    
T  3492 tatcc 3496  T

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Target: scaffold0653; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 3564 - 3511
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||| ||||||||||||| |||||| ||||||||||||||||||| ||||    
T  3564 ggagaaaatttaggtacaattctttaggtacttttcgtatggttcttaaataaa 3511  T

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Target: scaffold0118 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 390 - 492
Target Start/End: Complemental strand, 14612 - 14510
Alignment:
Q  390 gagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttata 489  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| | ||| ||| |||||||||||||||||||| |||||||    
T  14612 gagaaaacttaggtacaattccttgggtgcttttcgtatcgttcttaactaaattcaccattacttcgtcatatccataattttctcaaagtctgttata 14513  T
Q  490 tcc 492  Q
    |||    
T  14512 tcc 14510  T

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Target: scaffold0118; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 14442 - 14495
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||||||||||| |||||||| ||||| |||||| ||||||||||    
T  14442 ggagaaaacttaggtacaatttcttaggtgtttttcctatggtacttaactaaa 14495  T

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Target: scaffold0137 (Bit Score: 73; Significance: 4e-33; HSPs: 2)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 384 - 492
Target Start/End: Complemental strand, 10291 - 10183
Alignment:
Q  384 aagatggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagttt 483  Q
    |||| |||||||| |||||||||||| |||| |||||||||||||  ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||    
T  10291 aagaaggagaaaatttaggtacaatttcttatgtgcttttcgtataattcttaagtaaattcaccatgattttctcacatccataattttctcaaagttt 10192  T
Q  484 gttatatcc 492  Q
    |||||||||    
T  10191 gttatatcc 10183  T

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Target: scaffold0137; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 442
Target Start/End: Original strand, 10118 - 10169
Alignment:
Q  391 agaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  10118 agaaaacttaggtataattccttaggtgttttgcgtatggttcttaactaaa 10169  T

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Target: scaffold0595 (Bit Score: 71; Significance: 6e-32; HSPs: 2)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 389 - 468
Target Start/End: Complemental strand, 5878 - 5797
Alignment:
Q  389 ggagaaaacttaggtacaatt--ccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccata 468  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5878 ggagaaaacttaggtacaattttccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccata 5797  T

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Target: scaffold0595; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 5701 - 5754
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  5701 ggagaaaactaaggtacaattctttaggtgcttttcgtatggttcttaactaaa 5754  T

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Target: scaffold0018 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 399 - 492
Target Start/End: Original strand, 138287 - 138380
Alignment:
Q  399 taggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||| |||||||| || ||||||||| |||| | ||||||| ||||||||    
T  138287 taggtacaattccttaggagcttttcgtatgattcttaactaaattcatcatgattttcttaaatccatattttttttaaagtttattatatcc 138380  T

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Target: scaffold0013 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 426 - 492
Target Start/End: Complemental strand, 94306 - 94240
Alignment:
Q  426 tatggttcttaactaaattcaccatgatttcctcaaatccataattttctcaaagtttgttatatcc 492  Q
    ||||||||||||||||||||||||||||||  ||||||||| |||||||||| ||||||||||||||    
T  94306 tatggttcttaactaaattcaccatgattttatcaaatccaaaattttctcatagtttgttatatcc 94240  T

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Target: scaffold0069 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 26405 - 26458
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26405 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttattaactaaa 26458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 418
Target Start/End: Complemental strand, 26492 - 26463
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtg 418  Q
    ||||||||||||||||||||||||||||||    
T  26492 ggagaaaacttaggtacaattccttaggtg 26463  T

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Target: scaffold0006 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 388 - 460
Target Start/End: Original strand, 72287 - 72359
Alignment:
Q  388 tggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaattcaccatgatttcctca 460  Q
    |||||| ||||||||||||||||||||| ||||||| ||||| |||||| ||||||||||||| |||| ||||    
T  72287 tggagagaacttaggtacaattccttagatgctttttgtatgattcttagctaaattcaccataattttctca 72359  T

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Target: scaffold0006; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 72441 - 72389
Alignment:
Q  389 ggagaaaacttaggtacaattccttaggtgcttttcgtatggttcttaactaaa 442  Q
    ||||||||||||| | |||||||||| ||||||||||||||||| |||||||||    
T  72441 ggagaaaacttag-tgcaattccttaagtgcttttcgtatggtttttaactaaa 72389  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 55
Target Start/End: Complemental strand, 68623 - 68582
Alignment:
Q  14 tttggtattctttctttaccgtcacaaccccatcttacctct 55  Q
    |||||||||||||||| ||  |||||||||||||||||||||    
T  68623 tttggtattctttcttcacaatcacaaccccatcttacctct 68582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 458
Target Start/End: Original strand, 90738 - 90770
Alignment:
Q  426 tatggttcttaactaaattcaccatgatttcct 458  Q
    ||||||||||||||||||| |||||||||||||    
T  90738 tatggttcttaactaaatttaccatgatttcct 90770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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