View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19236_low_27 (Length: 300)

Name: NF19236_low_27
Description: NF19236
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19236_low_27
NF19236_low_27
[»] chr6 (30 HSPs)
chr6 (10-122)||(1966718-1966830)
chr6 (246-299)||(3403867-3403920)
chr6 (246-299)||(30388242-30388295)
chr6 (246-300)||(2762606-2762660)
chr6 (246-300)||(10039844-10039898)
chr6 (246-300)||(18242033-18242087)
chr6 (246-300)||(33972190-33972244)
chr6 (246-300)||(11656603-11656657)
chr6 (122-172)||(33829641-33829691)
chr6 (123-172)||(33828990-33829039)
chr6 (246-300)||(13579529-13579583)
chr6 (246-300)||(33658563-33658617)
chr6 (122-172)||(3403994-3404044)
chr6 (123-172)||(3403717-3403766)
chr6 (251-300)||(3403722-3403770)
chr6 (251-300)||(3403990-3404038)
chr6 (115-172)||(18241846-18241903)
chr6 (123-172)||(18242161-18242210)
chr6 (123-172)||(33974304-33974353)
chr6 (253-300)||(21032107-21032154)
chr6 (251-294)||(31598157-31598200)
chr6 (251-294)||(31598641-31598684)
chr6 (122-172)||(10039675-10039724)
chr6 (251-297)||(12714436-12714481)
chr6 (122-172)||(21032285-21032335)
chr6 (251-300)||(10039681-10039728)
chr6 (123-172)||(11656787-11656836)
chr6 (251-300)||(18241859-18241907)
chr6 (251-300)||(30388363-30388411)
chr6 (120-172)||(31598278-31598329)
[»] scaffold0802 (4 HSPs)
scaffold0802 (246-300)||(1297-1351)
scaffold0802 (123-172)||(1425-1474)
scaffold0802 (251-300)||(1123-1171)
scaffold0802 (251-300)||(1421-1469)
[»] chr8 (55 HSPs)
chr8 (246-300)||(15156062-15156116)
chr8 (246-299)||(37752237-37752290)
chr8 (246-300)||(12281247-12281301)
chr8 (246-299)||(41662281-41662334)
chr8 (246-299)||(43245994-43246047)
chr8 (246-297)||(43162417-43162468)
chr8 (246-300)||(765857-765911)
chr8 (246-300)||(9465695-9465749)
chr8 (246-300)||(18019910-18019964)
chr8 (246-300)||(34313941-34313995)
chr8 (115-172)||(9823366-9823423)
chr8 (122-172)||(13026634-13026684)
chr8 (123-172)||(3307338-3307387)
chr8 (115-172)||(12281116-12281173)
chr8 (123-172)||(39724053-39724102)
chr8 (251-299)||(16929067-16929115)
chr8 (246-300)||(7127828-7127882)
chr8 (126-172)||(13027286-13027332)
chr8 (123-172)||(22851390-22851439)
chr8 (115-172)||(22851961-22852018)
chr8 (246-300)||(33748161-33748217)
chr8 (123-172)||(41662408-41662457)
chr8 (125-172)||(765736-765783)
chr8 (246-300)||(22786933-22786987)
chr8 (123-172)||(9822748-9822797)
chr8 (246-299)||(11007654-11007707)
chr8 (251-300)||(12281427-12281475)
chr8 (123-172)||(15156190-15156239)
chr8 (123-172)||(16929247-16929296)
chr8 (246-298)||(74864-74916)
chr8 (116-172)||(43246181-43246237)
chr8 (246-290)||(43597913-43597957)
chr8 (113-172)||(6199101-6199160)
chr8 (121-172)||(13936721-13936771)
chr8 (121-172)||(24473773-24473824)
chr8 (123-174)||(37397148-37397199)
chr8 (122-172)||(15155882-15155932)
chr8 (122-172)||(16928941-16928991)
chr8 (251-300)||(23123518-23123564)
chr8 (114-172)||(37396699-37396757)
chr8 (134-172)||(39723413-39723451)
chr8 (251-300)||(765739-765787)
chr8 (116-172)||(6092770-6092824)
chr8 (251-300)||(15155888-15155936)
chr8 (251-300)||(16928947-16928995)
chr8 (251-300)||(16929243-16929291)
chr8 (123-172)||(37752084-37752133)
chr8 (251-300)||(37752089-37752137)
chr8 (251-300)||(37752417-37752465)
chr8 (123-172)||(37752421-37752470)
chr8 (251-300)||(41662404-41662452)
chr8 (251-300)||(43245876-43245924)
chr8 (251-300)||(43246177-43246225)
chr8 (251-299)||(12281129-12281176)
chr8 (108-172)||(20861643-20861707)
[»] chr2 (43 HSPs)
chr2 (246-300)||(32673020-32673074)
chr2 (246-299)||(11883746-11883799)
chr2 (246-300)||(6171334-6171388)
chr2 (246-300)||(20347341-20347395)
chr2 (246-300)||(30191046-30191100)
chr2 (121-172)||(2638818-2638869)
chr2 (246-300)||(40221489-40221543)
chr2 (115-172)||(18296698-18296755)
chr2 (251-300)||(26737657-26737706)
chr2 (246-299)||(40469607-40469660)
chr2 (122-172)||(2639487-2639537)
chr2 (246-300)||(15920912-15920966)
chr2 (122-172)||(26841586-26841636)
chr2 (121-172)||(20347469-20347520)
chr2 (246-300)||(17345854-17345908)
chr2 (122-172)||(30190922-30190972)
chr2 (123-172)||(26842243-26842292)
chr2 (120-172)||(6171461-6171513)
chr2 (124-172)||(18296077-18296125)
chr2 (120-172)||(24832328-24832380)
chr2 (122-174)||(41790915-41790967)
chr2 (121-172)||(11883621-11883672)
chr2 (117-172)||(37720198-37720253)
chr2 (126-172)||(7591204-7591250)
chr2 (123-172)||(7591855-7591904)
chr2 (251-300)||(11883628-11883676)
chr2 (251-300)||(11883927-11883975)
chr2 (123-172)||(11883931-11883980)
chr2 (251-300)||(24832336-24832384)
chr2 (123-172)||(26737786-26737835)
chr2 (251-300)||(40469730-40469778)
chr2 (117-172)||(8851142-8851197)
chr2 (69-120)||(30502078-30502129)
chr2 (122-172)||(5378660-5378710)
chr2 (246-300)||(18055166-18055220)
chr2 (246-300)||(43495485-43495538)
chr2 (115-172)||(6495726-6495783)
chr2 (123-172)||(17850978-17851027)
chr2 (251-300)||(20347465-20347513)
chr2 (251-300)||(30190928-30190976)
chr2 (251-300)||(32672847-32672895)
chr2 (123-172)||(40469427-40469476)
chr2 (115-172)||(40469734-40469791)
[»] chr1 (29 HSPs)
chr1 (246-300)||(17518481-17518535)
chr1 (246-300)||(47955429-47955483)
chr1 (246-299)||(22149580-22149633)
chr1 (246-300)||(8108899-8108953)
chr1 (246-300)||(41083031-41083085)
chr1 (121-172)||(49284407-49284458)
chr1 (123-172)||(48190771-48190820)
chr1 (120-172)||(47955303-47955355)
chr1 (121-172)||(8108998-8109049)
chr1 (122-172)||(48191360-48191410)
chr1 (246-297)||(31848016-31848067)
chr1 (123-172)||(6002237-6002286)
chr1 (251-299)||(22149701-22149748)
chr1 (246-298)||(46057016-46057068)
chr1 (121-172)||(13589664-13589714)
chr1 (125-172)||(17518607-17518653)
chr1 (121-172)||(22149704-22149755)
chr1 (121-172)||(39692005-39692056)
chr1 (122-172)||(32163048-32163098)
chr1 (122-172)||(44911024-44911074)
chr1 (120-174)||(50615237-50615291)
chr1 (120-174)||(50623065-50623119)
chr1 (251-300)||(8108994-8109042)
chr1 (123-172)||(9347126-9347175)
chr1 (251-300)||(13589660-13589707)
chr1 (115-172)||(27172546-27172603)
chr1 (123-172)||(41082909-41082958)
chr1 (251-300)||(47955311-47955359)
chr1 (114-153)||(14731-14771)
[»] scaffold0319 (5 HSPs)
scaffold0319 (246-299)||(6575-6628)
scaffold0319 (119-172)||(6390-6443)
scaffold0319 (251-300)||(6399-6447)
scaffold0319 (251-300)||(6698-6745)
scaffold0319 (123-172)||(6702-6750)
[»] scaffold0192 (3 HSPs)
scaffold0192 (246-299)||(25247-25300)
scaffold0192 (121-172)||(25374-25425)
scaffold0192 (251-300)||(25370-25418)
[»] chr5 (37 HSPs)
chr5 (246-299)||(18433138-18433191)
chr5 (246-300)||(25115880-25115934)
chr5 (246-300)||(25174972-25175026)
chr5 (246-298)||(34576988-34577040)
chr5 (122-172)||(18816951-18817001)
chr5 (121-169)||(11350806-11350854)
chr5 (246-298)||(26020573-26020625)
chr5 (123-172)||(18817616-18817665)
chr5 (246-297)||(5779742-5779793)
chr5 (246-300)||(5187645-5187699)
chr5 (113-172)||(12498933-12498992)
chr5 (246-300)||(9869739-9869793)
chr5 (126-172)||(11351432-11351478)
chr5 (122-172)||(22429201-22429250)
chr5 (122-172)||(25115756-25115806)
chr5 (122-172)||(25174848-25174898)
chr5 (251-300)||(5187831-5187879)
chr5 (246-295)||(12441196-12441245)
chr5 (123-172)||(18433015-18433064)
chr5 (251-300)||(18433020-18433068)
chr5 (120-172)||(26020447-26020499)
chr5 (246-297)||(9665649-9665700)
chr5 (252-299)||(16726084-16726130)
chr5 (121-172)||(18433321-18433372)
chr5 (246-297)||(23011261-23011312)
chr5 (122-172)||(12498566-12498616)
chr5 (122-172)||(16466747-16466797)
chr5 (122-172)||(25116066-25116116)
chr5 (122-172)||(25175156-25175206)
chr5 (122-172)||(26571169-26571219)
chr5 (251-300)||(18433317-18433365)
chr5 (123-172)||(23011079-23011127)
chr5 (259-300)||(23011091-23011131)
chr5 (251-300)||(25116062-25116110)
chr5 (251-300)||(25175152-25175200)
chr5 (251-300)||(26020455-26020503)
chr5 (116-172)||(25940514-25940570)
[»] scaffold0110 (3 HSPs)
scaffold0110 (246-300)||(45684-45738)
scaffold0110 (118-180)||(45532-45593)
scaffold0110 (122-172)||(45812-45861)
[»] chr7 (47 HSPs)
chr7 (246-300)||(9412202-9412256)
chr7 (246-299)||(13772793-13772846)
chr7 (113-165)||(13863968-13864020)
chr7 (122-172)||(13863312-13863362)
chr7 (115-172)||(44600140-44600197)
chr7 (246-300)||(3687534-3687588)
chr7 (246-300)||(6908391-6908445)
chr7 (123-172)||(44599489-44599538)
chr7 (122-172)||(9412330-9412380)
chr7 (123-172)||(3687661-3687710)
chr7 (251-300)||(18925230-18925279)
chr7 (246-299)||(33628501-33628554)
chr7 (246-297)||(15567169-15567220)
chr7 (248-298)||(5349641-5349691)
chr7 (122-172)||(8643771-8643821)
chr7 (251-297)||(27096170-27096216)
chr7 (251-297)||(27182087-27182133)
chr7 (123-177)||(29293346-29293400)
chr7 (251-300)||(9412028-9412076)
chr7 (120-172)||(37972401-37972453)
chr7 (251-299)||(38191388-38191435)
chr7 (253-300)||(5735382-5735429)
chr7 (121-172)||(29292920-29292971)
chr7 (246-297)||(35080132-35080183)
chr7 (121-172)||(38826918-38826969)
chr7 (122-172)||(10533033-10533083)
chr7 (114-172)||(20419329-20419387)
chr7 (246-300)||(34235856-34235910)
chr7 (122-172)||(37889264-37889314)
chr7 (251-300)||(3687657-3687705)
chr7 (124-177)||(5735253-5735306)
chr7 (123-172)||(9035298-9035347)
chr7 (251-300)||(9412326-9412374)
chr7 (123-172)||(13741557-13741606)
chr7 (115-172)||(13772633-13772690)
chr7 (251-300)||(13772902-13772950)
chr7 (123-172)||(13772906-13772955)
chr7 (122-171)||(23686723-23686772)
chr7 (123-172)||(37888833-37888882)
chr7 (123-172)||(38191570-38191619)
chr7 (120-172)||(3205098-3205150)
chr7 (272-300)||(15567017-15567045)
chr7 (120-172)||(17156964-17157016)
chr7 (120-172)||(22740153-22740205)
chr7 (251-295)||(23686723-23686766)
chr7 (115-163)||(34235730-34235778)
chr7 (116-172)||(37971953-37972009)
[»] chr4 (55 HSPs)
chr4 (246-300)||(11241567-11241621)
chr4 (246-299)||(16555695-16555748)
chr4 (115-172)||(36095809-36095866)
chr4 (246-298)||(22681702-22681754)
chr4 (250-300)||(3930357-3930407)
chr4 (246-300)||(13198727-13198781)
chr4 (118-172)||(43051257-43051311)
chr4 (246-300)||(49178639-49178693)
chr4 (247-300)||(27304894-27304947)
chr4 (246-298)||(35393599-35393651)
chr4 (246-300)||(8488307-8488361)
chr4 (122-172)||(50678778-50678828)
chr4 (246-298)||(5206138-5206190)
chr4 (116-172)||(18077207-18077263)
chr4 (126-172)||(36096480-36096526)
chr4 (122-172)||(56505692-56505742)
chr4 (251-300)||(8181996-8182045)
chr4 (251-300)||(16555818-16555866)
chr4 (123-172)||(50679429-50679478)
chr4 (121-172)||(26207751-26207802)
chr4 (251-300)||(5206231-5206278)
chr4 (126-172)||(47219206-47219252)
chr4 (122-164)||(56506587-56506629)
chr4 (251-300)||(8182173-8182222)
chr4 (115-172)||(13198911-13198968)
chr4 (251-300)||(16555520-16555568)
chr4 (115-172)||(24775788-24775845)
chr4 (119-172)||(43050603-43050656)
chr4 (127-172)||(49178821-49178866)
chr4 (122-170)||(45830203-45830251)
chr4 (113-172)||(9023685-9023744)
chr4 (123-174)||(9380307-9380358)
chr4 (122-177)||(9380741-9380796)
chr4 (117-172)||(28196340-28196395)
chr4 (121-172)||(28196778-28196829)
chr4 (122-172)||(3930485-3930534)
chr4 (122-172)||(9023243-9023293)
chr4 (246-300)||(24775641-24775695)
chr4 (115-165)||(32703217-32703267)
chr4 (115-165)||(35393788-35393837)
chr4 (121-171)||(45828992-45829042)
chr4 (123-172)||(169444-169493)
chr4 (251-300)||(3930481-3930528)
chr4 (120-172)||(8182177-8182230)
chr4 (251-300)||(8488483-8488530)
chr4 (251-300)||(13198907-13198955)
chr4 (123-172)||(16555822-16555871)
chr4 (251-300)||(18077203-18077251)
chr4 (123-172)||(23540257-23540306)
chr4 (123-172)||(32703655-32703704)
chr4 (123-172)||(43292362-43292411)
chr4 (251-300)||(56505698-56505746)
chr4 (246-298)||(7603296-7603348)
chr4 (124-172)||(25161879-25161927)
chr4 (120-172)||(25225403-25225455)
[»] chr3 (33 HSPs)
chr3 (246-300)||(10293730-10293784)
chr3 (246-300)||(20968897-20968951)
chr3 (246-299)||(18875012-18875065)
chr3 (246-298)||(9026855-9026907)
chr3 (246-300)||(13657622-13657676)
chr3 (249-298)||(4947384-4947433)
chr3 (123-172)||(20969024-20969073)
chr3 (246-299)||(45060774-45060826)
chr3 (122-170)||(45060878-45060926)
chr3 (249-300)||(18874885-18874935)
chr3 (246-300)||(1101091-1101144)
chr3 (246-300)||(3644721-3644775)
chr3 (246-300)||(17372474-17372528)
chr3 (123-172)||(10293608-10293657)
chr3 (246-298)||(14015873-14015926)
chr3 (251-300)||(18875192-18875240)
chr3 (121-172)||(47871127-47871177)
chr3 (246-300)||(17440880-17440934)
chr3 (122-172)||(48159896-48159946)
chr3 (123-172)||(1927772-1927821)
chr3 (115-172)||(1928439-1928495)
chr3 (251-300)||(3644784-3644832)
chr3 (123-172)||(8314013-8314062)
chr3 (251-300)||(10293910-10293958)
chr3 (123-172)||(10293914-10293963)
chr3 (251-300)||(17372303-17372351)
chr3 (119-172)||(17441068-17441121)
chr3 (251-300)||(20969020-20969068)
chr3 (124-165)||(22429159-22429200)
chr3 (251-296)||(47871005-47871049)
chr3 (251-300)||(47871123-47871170)
chr3 (115-172)||(53687880-53687937)
chr3 (122-174)||(42455789-42455841)
[»] scaffold0001 (6 HSPs)
scaffold0001 (246-297)||(439021-439072)
scaffold0001 (246-297)||(183544-183595)
scaffold0001 (251-297)||(439203-439248)
scaffold0001 (123-172)||(438930-438979)
scaffold0001 (251-300)||(438935-438983)
scaffold0001 (121-165)||(183674-183718)
[»] scaffold1221 (1 HSPs)
scaffold1221 (246-300)||(1604-1658)
[»] scaffold0328 (2 HSPs)
scaffold0328 (123-172)||(6800-6849)
scaffold0328 (123-170)||(6152-6199)
[»] scaffold0002 (1 HSPs)
scaffold0002 (246-292)||(412044-412090)
[»] scaffold0598 (1 HSPs)
scaffold0598 (246-300)||(6752-6806)
[»] scaffold0015 (1 HSPs)
scaffold0015 (246-300)||(16976-17030)
[»] scaffold0535 (1 HSPs)
scaffold0535 (121-172)||(10010-10061)
[»] scaffold0009 (1 HSPs)
scaffold0009 (121-172)||(205685-205735)
[»] scaffold0460 (1 HSPs)
scaffold0460 (118-172)||(325-379)
[»] scaffold0035 (1 HSPs)
scaffold0035 (246-300)||(73086-73140)


Alignment Details
Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 10 - 122
Target Start/End: Original strand, 1966718 - 1966830
Alignment:
Q  10 atagacattgcatttgtgatactcaaataaacatcgcatttgtgatatcataaaaaacattaattataagtttttaattaccattctcaacaaactcact 109  Q
    |||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1966718 atagacattgcatttgtgatatacaaataaacatcgcatttgtgacatcataaaaaacattaattataagtttttaattaccattctcaacaaactcact 1966817  T
Q  110 ctcttaaaaataa 122  Q
    |||||||||||||    
T  1966818 ctcttaaaaataa 1966830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 3403920 - 3403867
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3403920 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 3403867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 30388295 - 30388242
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30388295 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 30388242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 2762606 - 2762660
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2762606 tgttcaattgcacttttgccccctatctttttgctaattgtgcgattttgcaccc 2762660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 10039898 - 10039844
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10039898 tgttcaattgcacttttgccccctatctttttgctaattgtgcgattttgcaccc 10039844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 18242087 - 18242033
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18242087 tgttcaattgcacttttgccccttatctttttgttaattgtgcgattttgcaccc 18242033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 33972244 - 33972190
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  33972244 tgttcaattgcacttttgccccatatctttttgctaattgtgagattttgcaccc 33972190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 11656603 - 11656657
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  11656603 tgttcaattgcacttttgccccctatcgttttgataattgtgcgattttgcaccc 11656657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 33829691 - 33829641
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  33829691 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgc 33829641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 33828990 - 33829039
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  33828990 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgc 33829039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 13579583 - 13579529
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||| ||| |||||||||||||||| ||| |||||||    
T  13579583 tgttcaattgcacttttgccccctatatttttgctaattgtgcaattctgcaccc 13579529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 33658563 - 33658617
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||| |||||||||||||||| |||||||||||| |||||||| |||||||||||    
T  33658563 tgtttaattgcacttttgccctttatctttttgccaattgtgcaattttgcaccc 33658617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 3404044 - 3403994
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  3404044 aggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgc 3403994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 3403717 - 3403766
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  3403717 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgc 3403766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 3403722 - 3403770
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  3403722 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 3403770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 3404038 - 3403990
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  3404038 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 3403990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 18241846 - 18241903
Alignment:
Q  115 aaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||| |||||||||||||| ||||| |||||||||||||  ||||||||| ||||||    
T  18241846 aaaaaaaaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgc 18241903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 18242210 - 18242161
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||||||   ||||||||||||||||||||||| ||||||    
T  18242210 ggcttaattgcattttttttccctatcttttgccaattgtgcgattttgc 18242161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 33974353 - 33974304
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||||||| |||||||  ||||||||||||||| ||||||    
T  33974353 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgc 33974304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 300
Target Start/End: Original strand, 21032107 - 21032154
Alignment:
Q  253 ttgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||||||||| |||||| |||  ||||||||||||||||||||    
T  21032107 ttgcacttttgccccctatcttcttgtcaattgtgcgattttgcaccc 21032154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 294
Target Start/End: Complemental strand, 31598200 - 31598157
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgatttt 294  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||    
T  31598200 aattgcacttttgccccctatctttttgtcaattgtgcgatttt 31598157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 294
Target Start/End: Complemental strand, 31598684 - 31598641
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgatttt 294  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||    
T  31598684 aattgcacttttgccccctatctttttgtcaattgtgcgatttt 31598641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 10039675 - 10039724
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  10039675 aggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgc 10039724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 12714436 - 12714481
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgca 297  Q
    ||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  12714436 aattgcacttttgccccctatc-ttttgttaattgtgcgattttgca 12714481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 21032335 - 21032285
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||||||||  ||||||||| ||||||    
T  21032335 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgc 21032285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 10039681 - 10039728
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  10039681 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcaccc 10039728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 11656836 - 11656787
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| | |||||||||||| ||||||||| ||||||    
T  11656836 ggcttaattgcacttttctctcctatcttttgctaattgtgcgattttgc 11656787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 18241859 - 18241907
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||    
T  18241859 aattgcacttttcccccctatctttt-gttaattgtgcgattttgcaccc 18241907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 30388411 - 30388363
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||| |||||| |||| |||||||| |||||||||||||||||||||||    
T  30388411 aattgtactttttccccctatctttt-gctaattgtgcgattttgcaccc 30388363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 31598329 - 31598278
Alignment:
Q  120 taaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||||| || ||||||||||| ||||||||| ||||||    
T  31598329 taaggcttaattgtatttttc-cctctatcttttgctaattgtgcgattttgc 31598278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 55; Significance: 1e-22; HSPs: 4)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 1351 - 1297
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1351 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 1297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 1474 - 1425
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||  |||||||||||||||||||||||| ||||||    
T  1474 ggcttaattgcactttttccccctatcttttgccaattgtgcgattttgc 1425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 1123 - 1171
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||    
T  1123 aattgcactttttccccctatctttt-gttaattgtgcgattttgcaccc 1171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 1469 - 1421
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  1469 aattgcactttttccccctatctttt-gccaattgtgcgattttgcaccc 1421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 15156116 - 15156062
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15156116 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 15156062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 37752237 - 37752290
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37752237 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 37752290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 12281247 - 12281301
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12281247 tgttcaattgcacttttgccccttatctttttgctaactgtgcgattttgcaccc 12281301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 41662334 - 41662281
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41662334 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttacacc 41662281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 43245994 - 43246047
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43245994 tgttcaattacacttttgccccttatctttttgctaattgtgcgattttgcacc 43246047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 43162468 - 43162417
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgca 297  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43162468 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgca 43162417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 765857 - 765911
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  765857 tgttcaattgcacttttgccccttatctttttgctaaccgtgcgattttgcaccc 765911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 9465695 - 9465749
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  9465695 tgttcaattgcacttttgccccctatctttttgctaactgtgcgattttgcaccc 9465749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 18019910 - 18019964
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  18019910 tgttcaattgcacttttgccccctatctttttcctaattgtgcgattttgcaccc 18019964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 34313995 - 34313941
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  34313995 tgttcaattgcacttttgtcccttatctttttgctaattgtacgattttgcaccc 34313941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 9823423 - 9823366
Alignment:
Q  115 aaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  9823423 aaaaacaaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgc 9823366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 13026634 - 13026684
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  13026634 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgc 13026684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 3307338 - 3307387
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  3307338 ggcttaattgcatttttcacccctatcttttgtcaattgtgcgattttgc 3307387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 12281116 - 12281173
Alignment:
Q  115 aaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||| |||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  12281116 aaaaaaaaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 12281173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 39724102 - 39724053
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  39724102 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgc 39724053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 16929067 - 16929115
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||    
T  16929067 aattgcacttttgccccttatctttttgttaattgtgagattttgcacc 16929115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 7127882 - 7127828
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||||||||||| |||| ||||||||||||||||| | ||||||||||||    
T  7127882 tgttcaattgcacttttaccccctatctttttgctaattgcgtgattttgcaccc 7127828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 13027332 - 13027286
Alignment:
Q  126 ttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||    
T  13027332 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgc 13027286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 22851390 - 22851439
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||||||||||||||||| |||||||||| ||||||    
T  22851390 ggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgc 22851439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 22852018 - 22851961
Alignment:
Q  115 aaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||| || ||||||||| |||||||| ||||||||||||||||||||||| ||||||    
T  22852018 aaaaaaaaagcttaattgtatttttcatccctatcttttgccaattgtgcgattttgc 22851961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 33748217 - 33748161
Alignment:
Q  246 tgttcaattgcacttttgccccttatcttttt--gctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||| ||| |||||  |||||||||||||||||||||||    
T  33748217 tgttcaattgcacttttgccccctatttttttttgctaattgtgcgattttgcaccc 33748161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 41662457 - 41662408
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  41662457 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 41662408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 172
Target Start/End: Original strand, 765736 - 765783
Alignment:
Q  125 cttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  765736 cttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 765783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 22786933 - 22786987
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||| ||||||||||||||||||||||| ||||  | ||||||||||||||||||    
T  22786933 tgtttaattgcacttttgccccttatctatttgtcagttgtgcgattttgcaccc 22786987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 9822748 - 9822797
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||||||||||||||||  |||||||||| ||||||    
T  9822748 ggcttaattgcacttttcacccctatcttttatcaattgtgcgattttgc 9822797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 11007654 - 11007707
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    |||| |||||||||||||| || ||||||||||| |||||||||||||| ||||    
T  11007654 tgtttaattgcacttttgctccctatctttttgccaattgtgcgattttacacc 11007707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 12281475 - 12281427
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||||    
T  12281475 aattgcacttttcccccttatctttt-gttaattgtgcgattttgcaccc 12281427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 15156239 - 15156190
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| ||||||||||||| |||||||||| ||||||    
T  15156239 ggcttaattgcacttttcccccctatcttttgtcaattgtgcgattttgc 15156190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 16929296 - 16929247
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  16929296 ggcttaattgcacttttctcccctatcttttgctaattgtgcgattttgc 16929247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 74916 - 74864
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 298  Q
    |||| ||||||||||||| ||| ||||||||||  ||||||||||||||||||    
T  74916 tgtttaattgcacttttgtcccctatctttttgtcaattgtgcgattttgcac 74864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 43246237 - 43246181
Alignment:
Q  116 aaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||| |||||||||||||| ||||| |||||||||||||| ||||||| | ||||||    
T  43246237 aaaacaaggcttaattgcacttttcccccctatcttttgctaattgtgtgattttgc 43246181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 43597913 - 43597957
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcga 290  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||    
T  43597913 tgttcaattgtgcttttgccccctatctttttgctaattgtgcga 43597957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 6199160 - 6199101
Alignment:
Q  113 ttaaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||| ||||||||||||| |||||  ||||||  ||||||||||||||| ||||||    
T  6199160 ttaaaaattaggcttaattgcacttttcttccctatagtttgccaattgtgcgattttgc 6199101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 13936721 - 13936771
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||| ||||| |||||||||||| ||||||||||| ||||||    
T  13936721 aaggcttaattgcacttttc-cccctatcttttaccaattgtgcgattttgc 13936771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 24473824 - 24473773
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||| |||||| ||||||  ||||||||||||||| ||||||    
T  24473824 aaggcttaattgcacttttcatccctatagtttgccaattgtgcgattttgc 24473773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 174
Target Start/End: Complemental strand, 37397199 - 37397148
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgccc 174  Q
    |||||||||||| ||||| |||||||  ||||||||||||||| ||||||||    
T  37397199 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccc 37397148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 15155882 - 15155932
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||||||||  ||||||||| ||||||    
T  15155882 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgc 15155932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 16928941 - 16928991
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||| | |||||||||||||| ||||||||| ||||||    
T  16928941 aggcttaattgcactttccccccctatcttttgctaattgtgcgattttgc 16928991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 23123564 - 23123518
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||||||    
T  23123564 aattgcacttt--ccccttatctttt-gctaattgtgcgattttgcaccc 23123518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 172
Target Start/End: Original strand, 37396699 - 37396757
Alignment:
Q  114 taaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||| ||||||||||||| ||||| |||||||  |||||| |||||||| ||||||    
T  37396699 taaaaattaggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgc 37396757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 39723413 - 39723451
Alignment:
Q  134 atttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  39723413 atttttcacctctatcttttgccaattgtgcgattttgc 39723451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 765739 - 765787
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  765739 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 765787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 6092770 - 6092824
Alignment:
Q  116 aaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||| |||||||||||||||||| |  |||||||||||| |||||||||| ||||||    
T  6092770 aaaagaaggcttaattgcattttcc--ccctatcttttgtcaattgtgcgattttgc 6092824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 15155888 - 15155936
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||    
T  15155888 aattgcacttttcccccctatctttt-gttaattgtgcgattttgcaccc 15155936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 16928947 - 16928995
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||  |||| |||||||| |||||||||||||||||||||||    
T  16928947 aattgcactttccccccctatctttt-gctaattgtgcgattttgcaccc 16928995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 16929291 - 16929243
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||||||    
T  16929291 aattgcacttttctcccctatctttt-gctaattgtgcgattttgcaccc 16929243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 37752084 - 37752133
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| ||||||| |||||| ||||||||| ||||||    
T  37752084 ggcttaattgcacttttcccccctatgttttgctaattgtgcgattttgc 37752133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 37752089 - 37752137
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| ||| |||| |||||||||||||||||||||||    
T  37752089 aattgcacttttcccccctatgtttt-gctaattgtgcgattttgcaccc 37752137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 37752465 - 37752417
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||    
T  37752465 aattgcacttttcccccctatctttt-gttaattgtgcgattttgcaccc 37752417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 37752470 - 37752421
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| |||||||||||||  ||||||||| ||||||    
T  37752470 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgc 37752421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 41662452 - 41662404
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  41662452 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 41662404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 43245876 - 43245924
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||    
T  43245876 aattgcactttttccccctatctttt-gataattgtgcgattttgcaccc 43245924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 43246225 - 43246177
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| |||||||||| ||||||||||||    
T  43246225 aattgcacttttcccccctatctttt-gctaattgtgtgattttgcaccc 43246177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 12281129 - 12281176
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    |||||||||||| |||| |||||||| || |||||||||||||||||||    
T  12281129 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcacc 12281176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 20861707 - 20861643
Alignment:
Q  108 ctctcttaaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||| ||| ||| |||||||||||||||||||  |||||||  | ||||||||||||| ||||||    
T  20861707 ctctattataaacaaggcttaattgcattttttccccctatagtctgccaattgtgcgattttgc 20861643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 32673074 - 32673020
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32673074 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 32673020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 11883746 - 11883799
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11883746 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 11883799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 6171388 - 6171334
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6171388 tgttcaattgcacttttgccccttatctttttgttaattgtgcgattttgcaccc 6171334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 20347395 - 20347341
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20347395 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 20347341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 30191046 - 30191100
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30191046 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 30191100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 2638818 - 2638869
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2638818 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgc 2638869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 40221543 - 40221489
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  40221543 tgttcaattgcgcttttgccccctatctttttgctaattgtgcgattttgcaccc 40221489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 18296755 - 18296698
Alignment:
Q  115 aaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  18296755 aaaaacaaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgc 18296698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 26737706 - 26737657
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26737706 aattgcacttttgccccctatctttttgctaattgtgcgattttgcaccc 26737657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 40469660 - 40469607
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  40469660 tgttcaattgcacttttcccccttatcgttttgctaattgtgcgattttgcacc 40469607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 2639537 - 2639487
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  2639537 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgc 2639487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 15920966 - 15920912
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| |||||    
T  15920966 tgttcaattgcacttttgccccctaactttttgctaattgtgcgattttacaccc 15920912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 26841586 - 26841636
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  26841586 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgc 26841636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 20347520 - 20347469
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  20347520 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 20347469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 17345854 - 17345908
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||||||| |||||    
T  17345854 tgttcaattgcacttttgccccctatatttttgttaattgtgcgatttttcaccc 17345908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 30190922 - 30190972
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  30190922 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 30190972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 26842292 - 26842243
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||| |||| |||||||||||||||||||||||||||||| ||||||    
T  26842292 ggcttaagtgcacttttcacccctatcttttgccaattgtgcgattttgc 26842243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 6171513 - 6171461
Alignment:
Q  120 taaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||||| ||||| |||||||||||||||||||||| | ||||||    
T  6171513 taaggcttaattgcacttttcccccctatcttttgccaattgtgggattttgc 6171461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 18296077 - 18296125
Alignment:
Q  124 gcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||| | |||||||||||||||||||||||||||||| ||||||    
T  18296077 gcttaattgtacttttcacccctatcttttgccaattgtgcgattttgc 18296125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 24832328 - 24832380
Alignment:
Q  120 taaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  24832328 taaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgc 24832380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 41790967 - 41790915
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgccc 174  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||| ||||||||    
T  41790967 aggcttaattgcacttttcccccctatattttgccaattgtgcgattttgccc 41790915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 11883621 - 11883672
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  11883621 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgc 11883672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 37720198 - 37720253
Alignment:
Q  117 aaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  37720198 aaataaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 37720253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 7591204 - 7591250
Alignment:
Q  126 ttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||| | |||||||||||||||||||||||||||||| ||||||    
T  7591204 ttaattgtacttttcacccctatcttttgccaattgtgcgattttgc 7591250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 7591904 - 7591855
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| |||||| ||||||||||| |||||||||| ||||||    
T  7591904 ggcttaattgcatctttcactcctatcttttgtcaattgtgcgattttgc 7591855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 11883628 - 11883676
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  11883628 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 11883676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 11883975 - 11883927
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  11883975 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 11883927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 11883980 - 11883931
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  11883980 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgc 11883931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 24832336 - 24832384
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  24832336 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 24832384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 26737835 - 26737786
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| |||||||||||||||||||| || |||||| ||||||    
T  26737835 ggcttaattgcacttttcacccctatcttttgctaactgtgcgattttgc 26737786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 40469778 - 40469730
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  40469778 aattgcactttttccccctatctttt-gctaattgtgcgattttgcaccc 40469730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 8851142 - 8851197
Alignment:
Q  117 aaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||| ||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  8851142 aaataaggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 8851197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 30502129 - 30502078
Alignment:
Q  69 ttaattataagtttttaattaccattctcaacaaactcactctcttaaaaat 120  Q
    ||||||||||||||| | ||| ||||||| ||||||||||||||||| ||||    
T  30502129 ttaattataagttttcatttatcattctctacaaactcactctcttagaaat 30502078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 5378660 - 5378710
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  5378660 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 5378710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 18055166 - 18055220
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||| |||||||||||||| || |||  |||||| ||||||||||||||||||||    
T  18055166 tgtttaattgcacttttgcaccctataattttgccaattgtgcgattttgcaccc 18055220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 43495538 - 43495485
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||| |||||||||||| ||||| |||||||||  ||||||||||||||||||||    
T  43495538 tgtttaattgcacttttccccct-atctttttgtcaattgtgcgattttgcaccc 43495485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 6495783 - 6495726
Alignment:
Q  115 aaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||| |||||||||||||| |||||  ||||||||||||  ||||||||| ||||||    
T  6495783 aaaaaaaaggcttaattgcacttttcctccctatcttttgtgaattgtgcgattttgc 6495726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 17850978 - 17851027
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  17850978 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 17851027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 20347513 - 20347465
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  20347513 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 20347465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 30190928 - 30190976
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  30190928 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 30190976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 32672847 - 32672895
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||  ||||||||||| | |||||||||||||||||||||    
T  32672847 aattgcacttttgttccttatctttt-gttaattgtgcgattttgcaccc 32672895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 40469427 - 40469476
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||| ||||||| | |||||||||||| ||||||||| ||||||    
T  40469427 ggcttaattgtatttttccctcctatcttttgctaattgtgcgattttgc 40469476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 40469791 - 40469734
Alignment:
Q  115 aaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||| |||| ||||||||| ||||  |||||||||||||| ||||||||| ||||||    
T  40469791 aaaaaaaaggtttaattgcactttttccccctatcttttgctaattgtgcgattttgc 40469734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 17518535 - 17518481
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17518535 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 17518481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 47955429 - 47955483
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  47955429 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 47955483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 22149633 - 22149580
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22149633 tgtttaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 22149580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 8108953 - 8108899
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  8108953 tgttcaattgcacttttgccccatatctttttgctaattgtgcgattttacaccc 8108899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 41083031 - 41083085
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  41083031 tgttcaattgtacttttgccccttatctttttactaattgtgcgattttgcaccc 41083085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 49284407 - 49284458
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  49284407 aaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgc 49284458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 48190771 - 48190820
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  48190771 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgc 48190820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 47955303 - 47955355
Alignment:
Q  120 taaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  47955303 taaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 47955355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 8109049 - 8108998
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  8109049 aaggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 8108998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 48191410 - 48191360
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| ||||||    
T  48191410 aggcttaattgcacttttcacccctatcttttgccaatggtgcgattttgc 48191360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 31848016 - 31848067
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgca 297  Q
    |||| ||||||||||||||||  ||||||||||| |||||||||||||||||    
T  31848016 tgtttaattgcacttttgccctctatctttttgccaattgtgcgattttgca 31848067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 6002237 - 6002286
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||||||||||||||||| |||||||| | ||||||    
T  6002237 ggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgc 6002286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Complemental strand, 22149748 - 22149701
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||||||    
T  22149748 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcacc 22149701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 46057016 - 46057068
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 298  Q
    |||| ||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  46057016 tgtttaattgcaattttgccccctatttttttgccaattgtgcgattttgcac 46057068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 13589714 - 13589664
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  13589714 aaggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgc 13589664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 172
Target Start/End: Complemental strand, 17518653 - 17518607
Alignment:
Q  125 cttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  17518653 cttaattgcacttttc-cccctatcttttgccaattgtgcgattttgc 17518607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 22149755 - 22149704
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||| ||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  22149755 aaggtttaattgcacttttcccccctatcttttgctaattgtgcgattttgc 22149704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 39692056 - 39692005
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||| ||||| ||||||| ||||| |||||||||| ||||||    
T  39692056 aaggcttaattgcacttttcccccctatattttgtcaattgtgcgattttgc 39692005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 32163098 - 32163048
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  32163098 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 32163048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 44911024 - 44911074
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||| | ||||||| |||||||||||||||| ||||||    
T  44911024 aggcttaattgcactttccccccctatattttgccaattgtgcgattttgc 44911074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 50615237 - 50615291
Alignment:
Q  120 taaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgccc 174  Q
    ||||||||||||||| ||||| |||||||  |||| |||||||||| ||||||||    
T  50615237 taaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgccc 50615291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 50623065 - 50623119
Alignment:
Q  120 taaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgccc 174  Q
    ||||||||||||||| ||||| |||||||  |||| |||||||||| ||||||||    
T  50623065 taaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgccc 50623119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 8109042 - 8108994
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  8109042 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 8108994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 9347126 - 9347175
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  9347126 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 9347175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 13589707 - 13589660
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  13589707 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcaccc 13589660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 27172603 - 27172546
Alignment:
Q  115 aaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||| |||||||||||||| ||||| ||||| |  ||||||||||||||| ||||||    
T  27172603 aaaaaaaaggcttaattgcacttttcccccctgtactttgccaattgtgcgattttgc 27172546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 41082909 - 41082958
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||| | ||||  |||||||||||||||||||||||| ||||||    
T  41082909 ggcttaattgtactttttccccctatcttttgccaattgtgcgattttgc 41082958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 47955311 - 47955359
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  47955311 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 47955359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 153
Target Start/End: Original strand, 14731 - 14771
Alignment:
Q  114 taaaaataaggcttaattgcattttt-cacccctatctttt 153  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  14731 taaaaataaggcttaattgcatttttggacccctatctttt 14771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 54; Significance: 5e-22; HSPs: 5)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 6628 - 6575
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6628 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 6575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 6390 - 6443
Alignment:
Q  119 ataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  6390 ataaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgc 6443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 6399 - 6447
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  6399 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 6447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 6745 - 6698
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  6745 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcaccc 6698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 6750 - 6702
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  6750 ggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgc 6702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 25300 - 25247
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25300 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 25247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 25425 - 25374
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  25425 aaggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgc 25374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 25418 - 25370
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  25418 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 25370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 5e-22; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 18433138 - 18433191
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18433138 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 18433191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 25115880 - 25115934
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25115880 tgttcaattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25115934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 25174972 - 25175026
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25174972 tgttcaattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 25175026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 34576988 - 34577040
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 298  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34576988 tgtttaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 34577040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 18816951 - 18817001
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18816951 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgc 18817001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 11350806 - 11350854
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttt 169  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11350806 aaggcttaattgcatttttcacccctatcttttgccaattgtgcatttt 11350854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 26020573 - 26020625
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 298  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  26020573 tgttcaattgcacttttgtcccttatctttttgttaattgtgcgattttgcac 26020625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 18817665 - 18817616
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  18817665 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgc 18817616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 5779793 - 5779742
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgca 297  Q
    |||||||||||||||||| | | |||||||||||||||||||||||||||||    
T  5779793 tgttcaattgcacttttgtctcctatctttttgctaattgtgcgattttgca 5779742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 5187645 - 5187699
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||||||| ||||    
T  5187645 tgttcaattgcacttttgtcccctatctttttgctaattatgcgattttgtaccc 5187699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 12498992 - 12498933
Alignment:
Q  113 ttaaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||| ||||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  12498992 ttaaaaattaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 12498933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 9869793 - 9869739
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||| ||||||||||||||||| | ||||||| | ||||||||||||||||||||    
T  9869793 tgtttaattgcacttttgccccctgtctttttaccaattgtgcgattttgcaccc 9869739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 11351478 - 11351432
Alignment:
Q  126 ttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||| ||||||| |||||||||||||||||||||| ||||||    
T  11351478 ttaattgcacttttcactcctatcttttgccaattgtgcgattttgc 11351432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 22429250 - 22429201
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  22429250 aggcttaattgcatttttc-cccctatcttttgctaattgtgcgattttgc 22429201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 25115756 - 25115806
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||||||||||||||||| | ||||||    
T  25115756 aggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgc 25115806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 25174848 - 25174898
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||||||||||||||||| | ||||||    
T  25174848 aggcttaattgcacttttcccccctatcttttgccaattgtgtgattttgc 25174898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 5187879 - 5187831
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  5187879 aattgcacttttgccccttatc-ttttgttaattgtgcaattttgcaccc 5187831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 12441245 - 12441196
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttg 295  Q
    |||| ||||||||||||||||| ||||||||||  |||||||||||||||    
T  12441245 tgtttaattgcacttttgccccctatctttttgtcaattgtgcgattttg 12441196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 18433015 - 18433064
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  18433015 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgc 18433064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 18433020 - 18433068
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  18433020 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 18433068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 26020447 - 26020499
Alignment:
Q  120 taaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||||| |||||  ||||||||||||| ||||||||| ||||||    
T  26020447 taaggcttaattgcacttttcctccctatcttttgctaattgtgcgattttgc 26020499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 9665649 - 9665700
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgca 297  Q
    ||||||||||   ||||||||| |||||||||||||||||||||||| ||||    
T  9665649 tgttcaattgtgtttttgccccctatctttttgctaattgtgcgattctgca 9665700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 299
Target Start/End: Original strand, 16726084 - 16726130
Alignment:
Q  252 attgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    |||||||||||||||| |||||||| || |||||||||||||||||||    
T  16726084 attgcacttttgccccctatctttt-gccaattgtgcgattttgcacc 16726130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 18433372 - 18433321
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||| ||||| |||||||||||||  ||||||||| ||||||    
T  18433372 aaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgc 18433321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 23011312 - 23011261
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgca 297  Q
    |||| ||||||| ||||||||| |||||||| || |||||||||||||||||    
T  23011312 tgtttaattgcaattttgccccctatcttttagccaattgtgcgattttgca 23011261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 12498566 - 12498616
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  12498566 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 12498616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 16466797 - 16466747
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| ||||||| |||||| ||||||||| ||||||    
T  16466797 aggcttaattgcacttttcccccctatattttgctaattgtgcgattttgc 16466747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 25116116 - 25116066
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||||||||  ||||||||| ||||||    
T  25116116 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgc 25116066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 25175206 - 25175156
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||||||||  ||||||||| ||||||    
T  25175206 aggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgc 25175156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 26571219 - 26571169
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  26571219 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 26571169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 18433365 - 18433317
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||    
T  18433365 aattgcacttttcccccctatctttt-gttaattgtgcgattttgcaccc 18433317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 23011079 - 23011127
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||||||| ||| |||||||||| ||||||||| ||||||    
T  23011079 ggcttaattgcatttttc-cccttatcttttgctaattgtgcgattttgc 23011127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 23011091 - 23011131
Alignment:
Q  259 ttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||| ||||||||||||| |||||||||||||||||||||||    
T  23011091 tttttccccttatctttt-gctaattgtgcgattttgcaccc 23011131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 25116110 - 25116062
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||    
T  25116110 aattgcacttttcccccctatctttt-gttaattgtgcgattttgcaccc 25116062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 25175200 - 25175152
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||    
T  25175200 aattgcacttttcccccctatctttt-gttaattgtgcgattttgcaccc 25175152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 26020455 - 26020503
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| | || |||||||| |||||||||||||||||||||||    
T  26020455 aattgcacttttcctccctatctttt-gctaattgtgcgattttgcaccc 26020503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 25940514 - 25940570
Alignment:
Q  116 aaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||| |||||||||||||||||||  |||||||  |||| |||||||||| ||||||    
T  25940514 aaaaaaaggcttaattgcatttttttcccctatagtttgtcaattgtgcgattttgc 25940570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 51; Significance: 3e-20; HSPs: 3)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 45738 - 45684
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45738 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 45684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 45532 - 45593
Alignment:
Q  118 aataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgccctccctc 180  Q
    ||||||||||||||||| ||||| |||||||||||||  ||||||||| |||||| |||||||    
T  45532 aataaggcttaattgcacttttc-cccctatcttttgttaattgtgcgattttgcactccctc 45593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 45861 - 45812
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  45861 aggcttaattgcacttttc-cccctatcttttgccaattgtgcgattttgc 45812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 9412256 - 9412202
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9412256 tgttcaattgcacttttgccccttatctttttgctaactgtgcgattttgcaccc 9412202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 13772846 - 13772793
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  13772846 tgttcaattacacttttgccccttatctttttgctaattgtgcgattttgcacc 13772793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 13864020 - 13863968
Alignment:
Q  113 ttaaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcg 165  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13864020 ttaaaaataaggcttaattgcacttttcacccctatcttttgccaattgtgcg 13863968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 13863312 - 13863362
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13863312 aggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgc 13863362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 44600197 - 44600140
Alignment:
Q  115 aaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  44600197 aaaattaaggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgc 44600140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 3687588 - 3687534
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||| |||||    
T  3687588 tgttcaattgcacttttgtcccttatttttttgctaattgtgcgattttacaccc 3687534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 6908445 - 6908391
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  6908445 tgttcaattgcgcttttaccccctatctttttgctaattgtgcgattttgcaccc 6908391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 44599489 - 44599538
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  44599489 ggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgc 44599538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 9412380 - 9412330
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  9412380 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 9412330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 3687710 - 3687661
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  3687710 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 3687661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 18925279 - 18925230
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||| ||||||||||| ||||||||||| ||||||||||||||||||||    
T  18925279 aattgaacttttgccccctatctttttgccaattgtgcgattttgcaccc 18925230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 33628501 - 33628554
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    ||||||||||||| ||||| || |||||||||||||||||||| ||||||||||    
T  33628501 tgttcaattgcacatttgcaccctatctttttgctaattgtgcaattttgcacc 33628554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 15567220 - 15567169
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgca 297  Q
    ||||||||||||| |||||||| | ||||||||||||||||| |||||||||    
T  15567220 tgttcaattgcacgtttgccccctctctttttgctaattgtgtgattttgca 15567169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 5349691 - 5349641
Alignment:
Q  248 ttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 298  Q
    |||||||||||||||||||| |||||||||||  ||||||| |||||||||    
T  5349691 ttcaattgcacttttgccccctatctttttgcatattgtgcaattttgcac 5349641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 8643821 - 8643771
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||| ||||||    
T  8643821 aggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgc 8643771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 297
Target Start/End: Original strand, 27096170 - 27096216
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgca 297  Q
    ||||||||||||||||| ||||||||| | |||||||||||||||||    
T  27096170 aattgcacttttgccccctatctttttaccaattgtgcgattttgca 27096216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 27182133 - 27182087
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgca 297  Q
    ||||||||||||||||| ||||||||| | |||||||||||||||||    
T  27182133 aattgcacttttgccccctatctttttaccaattgtgcgattttgca 27182087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 177
Target Start/End: Complemental strand, 29293400 - 29293346
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgccctcc 177  Q
    |||||||||||||||||| |||||||  ||||||||||||||| |||||| ||||    
T  29293400 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcactcc 29293346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 9412028 - 9412076
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||||    
T  9412028 aattgcacttttcccccttatctttt-gttaattgtgcgattttgcaccc 9412076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 37972453 - 37972401
Alignment:
Q  120 taaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  37972453 taaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 37972401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 38191388 - 38191435
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    |||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  38191388 aattgcactttttcccct-atctttttgccaattgtgcgattttgcacc 38191435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 300
Target Start/End: Original strand, 5735382 - 5735429
Alignment:
Q  253 ttgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||| | || ||||||||||| ||||||||||||||||||||    
T  5735382 ttgcactttttctccctatctttttgccaattgtgcgattttgcaccc 5735429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 29292920 - 29292971
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  29292920 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 29292971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 35080183 - 35080132
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgca 297  Q
    ||||||||||  |||||||||| |||||||  ||||||||||||||||||||    
T  35080183 tgttcaattgtgcttttgccccctatctttaagctaattgtgcgattttgca 35080132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 38826969 - 38826918
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||||||||| |||||||  |||| |||||||||| ||||||    
T  38826969 aaggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgc 38826918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 10533033 - 10533083
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  10533033 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 10533083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 20419387 - 20419329
Alignment:
Q  114 taaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||| |||||||||||||| ||||| |||||||  |||| |||||||||| ||||||    
T  20419387 taaaaaaaaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 20419329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 34235910 - 34235856
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||| ||||||||||||||||| ||||||||| | |||||| |||||| ||||||    
T  34235910 tgtttaattgcacttttgccccctatcttttttcaaattgttcgatttcgcaccc 34235856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 37889314 - 37889264
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  37889314 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 37889264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 3687705 - 3687657
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  3687705 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 3687657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 5735253 - 5735306
Alignment:
Q  124 gcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgccctcc 177  Q
    ||||||||||| ||||| ||||||||||| || ||||||||| |||||| ||||    
T  5735253 gcttaattgcacttttctcccctatctttggctaattgtgcgattttgcactcc 5735306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 9035347 - 9035298
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  9035347 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 9035298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 9412374 - 9412326
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  9412374 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 9412326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 13741557 - 13741606
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||||||| |||||||  ||| ||||||||||| ||||||    
T  13741557 ggcttaattgcatttttcccccctatagtttaccaattgtgcgattttgc 13741606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 13772633 - 13772690
Alignment:
Q  115 aaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||| ||||||||||||| |||||  ||||||||||||| ||||||| | ||||||    
T  13772633 aaaaattaggcttaattgcacttttcctccctatcttttgctaattgtgtgattttgc 13772690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 13772950 - 13772902
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||| ||| |||||||||||||||||||||||    
T  13772950 aattgcacttttcccccctatcattt-gctaattgtgcgattttgcaccc 13772902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 13772955 - 13772906
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| |||||||| ||||| ||||||||| ||||||    
T  13772955 ggcttaattgcacttttcccccctatcatttgctaattgtgcgattttgc 13772906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 171
Target Start/End: Complemental strand, 23686772 - 23686723
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttg 171  Q
    ||||||||||||| ||||  |||||||||||||| ||||||||| |||||    
T  23686772 aggcttaattgcactttttccccctatcttttgctaattgtgcgattttg 23686723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 37888833 - 37888882
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  37888833 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 37888882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 38191619 - 38191570
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||||||| ||||||||||||||  |||| |||| ||||||    
T  38191619 ggcttaattgcattttttacccctatcttttgttaattatgcgattttgc 38191570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 3205150 - 3205098
Alignment:
Q  120 taaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||||| ||||| |||||||  |||| |||||||||| ||||||    
T  3205150 taaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 3205098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 300
Target Start/End: Original strand, 15567017 - 15567045
Alignment:
Q  272 ctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||||||||||    
T  15567017 ctttttgctaattgtgcgattttgcaccc 15567045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 17156964 - 17157016
Alignment:
Q  120 taaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||||| ||||| |||||||  |||| |||||||||| ||||||    
T  17156964 taaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 17157016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 22740153 - 22740205
Alignment:
Q  120 taaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||||| ||||| |||||||  |||| |||||||||| ||||||    
T  22740153 taaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 22740205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 23686766 - 23686723
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttg 295  Q
    |||||||||||| |||| |||||||| ||||||||||||||||||    
T  23686766 aattgcactttttccccctatctttt-gctaattgtgcgattttg 23686723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 34235730 - 34235778
Alignment:
Q  115 aaaaataaggcttaattgcatttttcacccctatcttttgccaattgtg 163  Q
    ||||| |||||||||||||| ||||| | || |||||||||||||||||    
T  34235730 aaaaagaaggcttaattgcacttttccctcccatcttttgccaattgtg 34235778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 172
Target Start/End: Original strand, 37971953 - 37972009
Alignment:
Q  116 aaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||| ||||||||||||| ||||| ||||| |  ||||||||||||||| ||||||    
T  37971953 aaaattaggcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgc 37972009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 11241621 - 11241567
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11241621 tgttcaatttcacttttgccccttatctttttgctaattgtgcgattttgcaccc 11241567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 16555748 - 16555695
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16555748 tgttcaattgcacttttcccccttatctttttgctaattgtgcgattttgcacc 16555695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 36095809 - 36095866
Alignment:
Q  115 aaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  36095809 aaaaaaaaggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgc 36095866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 22681702 - 22681754
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 298  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22681702 tgttcaattgcacttttgtcccttatctttttgctaattgtgcgattttgcac 22681754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 3930407 - 3930357
Alignment:
Q  250 caattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3930407 caattgcacttttgtcccttatctttttgctaattgtgcgattttgcaccc 3930357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 13198727 - 13198781
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  13198727 tgttcaattgcacttttgtcccttatcttttttctaattgtgcgattttgcaccc 13198781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 43051311 - 43051257
Alignment:
Q  118 aataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  43051311 aataaggcttaattgcatttttcacccctatcttttgccaattgtgtgattttgc 43051257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 49178639 - 49178693
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  49178639 tgttcaattgcacttttgccccctatctttttgccaattgtgcgattttgcaccc 49178693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 247 - 300
Target Start/End: Complemental strand, 27304947 - 27304894
Alignment:
Q  247 gttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  27304947 gttcaattgcactttttccccctatctttttgctaattgtgcgattttgcaccc 27304894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 35393599 - 35393651
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 298  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  35393599 tgttcaattgaacttttgccccctatctttttgctaattgtgcgattttgcac 35393651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 8488307 - 8488361
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||| ||| |||||||||||||||| |||||||||||    
T  8488307 tgttcaattgcacttttgccccctatgtttttgctaattgtgcaattttgcaccc 8488361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 50678778 - 50678828
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  50678778 aggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgc 50678828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 5206190 - 5206138
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 298  Q
    ||||||||||||||| | |||| ||||||||||||||||||||||||||||||    
T  5206190 tgttcaattgcacttcttccccctatctttttgctaattgtgcgattttgcac 5206138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 18077263 - 18077207
Alignment:
Q  116 aaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||||||||| ||||||||||||| |||||| ||||||||| ||||||    
T  18077263 aaaataaggcttaattgcacttttcacccctattttttgctaattgtgcgattttgc 18077207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 36096526 - 36096480
Alignment:
Q  126 ttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||    
T  36096526 ttaattgcacttttcacccctatcttttgccaattgtgcgattttgc 36096480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 56505692 - 56505742
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  56505692 aggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 56505742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 8181996 - 8182045
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||||||||||| |||| |||||| ||||||||||||||||||||    
T  8181996 aattgcacttttgccccctatcgttttgccaattgtgcgattttgcaccc 8182045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 16555866 - 16555818
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  16555866 aattgcacttttcccccttatctttt-gctaattgtgcgattttgcaccc 16555818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 50679478 - 50679429
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||||||||||||||||||||||||| || ||||||    
T  50679478 ggcttaattgcacttttcacccctatcttttgccaattgtacgattttgc 50679429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 26207802 - 26207751
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||||||||| |||||||  ||||||||||||||| ||||||    
T  26207802 aaggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgc 26207751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 5206278 - 5206231
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  5206278 aattgcacttttcccccttatcttttt--taattgtgcgattttgcaccc 5206231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 47219252 - 47219206
Alignment:
Q  126 ttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  47219252 ttaattgcatttttcacctctatcttttgctaattgtgcgattttgc 47219206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 164
Target Start/End: Complemental strand, 56506629 - 56506587
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgc 164  Q
    ||||||||||||| ||||||||| |||||||||||||||||||    
T  56506629 aggcttaattgcacttttcacccttatcttttgccaattgtgc 56506587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 8182222 - 8182173
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||||||  ||| ||| ||||||||||||||||||||||||||||    
T  8182222 aattgcacttttcacccctatttttttgctaattgtgcgattttgcaccc 8182173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 13198968 - 13198911
Alignment:
Q  115 aaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||| |||||||||||||| ||||| |||||||||||||  ||||||||| ||||||    
T  13198968 aaaaaaaaggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgc 13198911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 16555520 - 16555568
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||||    
T  16555520 aattgcacttttcccccttatctttt-gttaattgtgcgattttgcaccc 16555568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 24775845 - 24775788
Alignment:
Q  115 aaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||| |||||||||||||| ||||| | ||||||||||| |||||||||| ||||||    
T  24775845 aaaaaaaaggcttaattgcacttttccctcctatcttttgtcaattgtgcgattttgc 24775788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 43050603 - 43050656
Alignment:
Q  119 ataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||| ||||||||| |||||| ||||||||||| ||||||||||| ||||||    
T  43050603 ataaggtttaattgcacttttcatccctatcttttaccaattgtgcgattttgc 43050656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 49178866 - 49178821
Alignment:
Q  127 taattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||| ||||| |||||||||||||||||||||||| ||||||    
T  49178866 taattgcacttttctcccctatcttttgccaattgtgcgattttgc 49178821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 45830251 - 45830203
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgttttt 170  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||| ||||    
T  45830251 aggcttaatcgcacttttcacccctatcttttgtcaattgtgcgatttt 45830203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 113 - 172
Target Start/End: Complemental strand, 9023744 - 9023685
Alignment:
Q  113 ttaaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||| |||||||||||||| ||||| |||||||  |||| |||||||||| ||||||    
T  9023744 ttaaaaacaaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 9023685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 174
Target Start/End: Original strand, 9380307 - 9380358
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgccc 174  Q
    |||||||||||| ||||| |||||||  ||||||||||||||| ||||||||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccc 9380358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 177
Target Start/End: Complemental strand, 9380796 - 9380741
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgccctcc 177  Q
    ||||||||||||| ||||| |||||||  ||||||||||||||| |||||| ||||    
T  9380796 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactcc 9380741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 28196340 - 28196395
Alignment:
Q  117 aaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||| ||||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  28196340 aaattaggcttaattgcacttttcccccctataatttgccaattgtgcgattttgc 28196395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 28196829 - 28196778
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  28196829 aaggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 28196778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Complemental strand, 3930534 - 3930485
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  3930534 aggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgc 3930485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 9023243 - 9023293
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  9023243 aggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgc 9023293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 24775641 - 24775695
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||| ||||||||||||||||| ||| ||||||  ||||||||||||||| ||||    
T  24775641 tgtttaattgcacttttgccccctatatttttgtcaattgtgcgattttgtaccc 24775695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 165
Target Start/End: Original strand, 32703217 - 32703267
Alignment:
Q  115 aaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcg 165  Q
    ||||| |||||||||||||| ||||| |||||||  |||||||||||||||    
T  32703217 aaaaaaaaggcttaattgcacttttcccccctataatttgccaattgtgcg 32703267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 35393837 - 35393788
Alignment:
Q  115 aaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcg 165  Q
    ||||| |||||||||||||| |||||| ||||||||||||| |||||||||    
T  35393837 aaaaaaaaggcttaattgcacttttca-ccctatcttttgctaattgtgcg 35393788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 45828992 - 45829042
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttg 171  Q
    |||||||||||| | ||||||| |||||||||| ||||||||||| |||||    
T  45828992 aaggcttaattgtacttttcactcctatcttttaccaattgtgcgattttg 45829042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 169493 - 169444
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||||||| |||||||  |||| |||||||||| ||||||    
T  169493 ggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgc 169444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 3930528 - 3930481
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  3930528 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcaccc 3930481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 8182230 - 8182177
Alignment:
Q  120 taaggcttaattgcatttttcaccccta-tcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||||| |||||||||||| | |||||| ||||||||| ||||||    
T  8182230 taaggcttaattgcacttttcacccctatttttttgctaattgtgcgattttgc 8182177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 8488530 - 8488483
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| | |||||||||||| ||||||||||||||||||||||    
T  8488530 aattgcactttt-cgccttatcttttt-ctaattgtgcgattttgcaccc 8488483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 13198955 - 13198907
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||    
T  13198955 aattgcacttttcccccctatctttt-gttaattgtgcgattttgcaccc 13198907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 16555871 - 16555822
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| ||| |||||||||| ||||||||| ||||||    
T  16555871 ggcttaattgcacttttcccccttatcttttgctaattgtgcgattttgc 16555822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 18077251 - 18077203
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||||||  ||| ||| ||||||||||||||||||||||||||||    
T  18077251 aattgcacttttcacccctat-tttttgctaattgtgcgattttgcaccc 18077203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 23540306 - 23540257
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| |||||||||||||  |||| |||||||||| ||||||    
T  23540306 ggcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgc 23540257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 32703704 - 32703655
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  32703704 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 32703655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 43292411 - 43292362
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||||||| ||||| |  ||||||||||||||| ||||||    
T  43292411 ggcttaattgcatttttcccccctttagtttgccaattgtgcgattttgc 43292362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 56505698 - 56505746
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  56505698 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 56505746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 7603348 - 7603296
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 298  Q
    |||| |||||||||||||| || ||||||||| | || |||||||||||||||    
T  7603348 tgtttaattgcacttttgctccctatctttttaccaaatgtgcgattttgcac 7603296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 25161879 - 25161927
Alignment:
Q  124 gcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 25161927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 25225455 - 25225403
Alignment:
Q  120 taaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||||| || |  | |||||||||||||||||||||| ||||||    
T  25225455 taaggcttaattgcacttctgtctcctatcttttgccaattgtgcgattttgc 25225403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 10293730 - 10293784
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10293730 tgttcaattgcacttttgccccttatctttttgttaattgtgcgattttgcaccc 10293784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 20968951 - 20968897
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20968951 tgttcaattgcacttttgccccttatcattttgctaattgtgcgattttgcaccc 20968897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 299
Target Start/End: Original strand, 18875012 - 18875065
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18875012 tgttcaattgcacttttgccccctatctttttgctaattgtgcgattttgcacc 18875065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 298
Target Start/End: Original strand, 9026855 - 9026907
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 298  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9026855 tgttcaattgcacttttgccccctatctttttgctaattgtgcgattttgcac 9026907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 13657676 - 13657622
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||| ||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  13657676 tgtttaattgcacttttgtcccctatctttttgccaattgtgcgattttgcaccc 13657622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 4947384 - 4947433
Alignment:
Q  249 tcaattgcacttttgccccttatctttttgctaattgtgcgattttgcac 298  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  4947384 tcaattgcacttttgccctctatctttttgccaattgtgcgattttgcac 4947433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 20969073 - 20969024
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| |||||||||||||||||||||||| ||||||    
T  20969073 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgc 20969024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 45060826 - 45060774
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcacc 299  Q
    ||||||||||||||||||||||| |||||||||| |||||| ||||||||||||    
T  45060826 tgttcaattgcacttttgcccct-atctttttgccaattgttcgattttgcacc 45060774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 170
Target Start/End: Complemental strand, 45060926 - 45060878
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgttttt 170  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| ||||    
T  45060926 aggcttaattgcacttttcacccctatcttttgctaattgtgcgatttt 45060878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 300
Target Start/End: Original strand, 18874885 - 18874935
Alignment:
Q  249 tcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  18874885 tcaattgcactttttccccctatctttt-gctaattgtgcgattttgcaccc 18874935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 1101144 - 1101091
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||| |||||||||||||||||| |||||||||  ||||||||||||||||||||    
T  1101144 tgtttaattgcacttttgcccct-atctttttgtcaattgtgcgattttgcaccc 1101091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 3644775 - 3644721
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||| ||||||||||||||||  |||| | |||||||||||||||||||||||||    
T  3644775 tgtttaattgcacttttgccctctatcctcttgctaattgtgcgattttgcaccc 3644721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 17372528 - 17372474
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||| ||| |||||||||| || ||||||||||| ||||||||||||||||||||    
T  17372528 tgtttaatggcacttttgcaccctatctttttgccaattgtgcgattttgcaccc 17372474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 10293608 - 10293657
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||||||  ||||||||||||| |||||||||| ||||||    
T  10293608 ggcttaattgcatttttttcccctatcttttgtcaattgtgcgattttgc 10293657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 14015926 - 14015873
Alignment:
Q  246 tgttcaattgcacttttgcccct-tatctttttgctaattgtgcgattttgcac 298  Q
    |||| |||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  14015926 tgtttaattgcacttttgcccccctatctttttgccaattgtgcgattttgcac 14015873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 18875240 - 18875192
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||||||||||||| |||||||| ||||||||| |||||||||||||    
T  18875240 aattgcacttttgccccctatctttt-gctaattgtacgattttgcaccc 18875192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 172
Target Start/End: Complemental strand, 47871177 - 47871127
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  47871177 aaggcttaattgcacttttc-cccctatcttttgctaattgtgcgattttgc 47871127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 17440880 - 17440934
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||| ||||||| ||||||||| ||| ||||||| ||||||||||||||| ||||    
T  17440880 tgtttaattgcatttttgccccatatatttttgccaattgtgcgattttgaaccc 17440934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 172
Target Start/End: Original strand, 48159896 - 48159946
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||| ||||| |||||||  ||||||||||||||| ||||||    
T  48159896 aggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgc 48159946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 1927772 - 1927821
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||  |||| ||||||||||||||||||| |||| ||||||    
T  1927772 ggcttaattgcacctttcccccctatcttttgccaattatgcgattttgc 1927821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 1928495 - 1928439
Alignment:
Q  115 aaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||| ||| ||||||||||||| | ||| |||||||||||||||||||| ||||||    
T  1928495 aaaaattaggtttaattgcattttcctccc-tatcttttgccaattgtgcgattttgc 1928439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 3644832 - 3644784
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    ||||||| |||| |||||||| |||||| |||||||||||||||||||||    
T  3644832 aattgcatttttcccccttat-tttttgttaattgtgcgattttgcaccc 3644784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 8314013 - 8314062
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| ||||||| ||||| |||||||||| ||||||    
T  8314013 ggcttaattgcacttttctcccctatattttgtcaattgtgcgattttgc 8314062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 10293958 - 10293910
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| | |||||||||||||||||||||    
T  10293958 aattgcacttttcccccctatctttt-gttaattgtgcgattttgcaccc 10293910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 10293963 - 10293914
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| |||||||||||||  ||||||||| ||||||    
T  10293963 ggcttaattgcacttttcccccctatcttttgttaattgtgcgattttgc 10293914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 17372303 - 17372351
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||| ||| |||| ||| ||||||||||||||||||||||||||||    
T  17372303 aattgcaccttttccccctat-tttttgctaattgtgcgattttgcaccc 17372351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 17441121 - 17441068
Alignment:
Q  119 ataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||||||||||||  | ||||||||||  ||||||||| ||||||    
T  17441121 ataaggcttaattgcatttttcctctctatcttttgttaattgtgcgattttgc 17441068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 20969068 - 20969020
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| || ||||||||||||||||||||    
T  20969068 aattgcacttttcccccctatctttt-gccaattgtgcgattttgcaccc 20969020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 165
Target Start/End: Original strand, 22429159 - 22429200
Alignment:
Q  124 gcttaattgcatttttcacccctatcttttgccaattgtgcg 165  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcg 22429200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 47871049 - 47871005
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgc 296  Q
    |||| ||||||||||||| |||||||||| ||||||||||||||||    
T  47871049 aattacacttttgcccct-atctttttgccaattgtgcgattttgc 47871005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 300
Target Start/End: Complemental strand, 47871170 - 47871123
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  47871170 aattgcacttttccccct-atctttt-gctaattgtgcgattttgcaccc 47871123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 53687880 - 53687937
Alignment:
Q  115 aaaaataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||| ||||||||||||||| ||||| |||||||  |||| |||||||||| ||||||    
T  53687880 aaaactaaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 53687937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 42455789 - 42455841
Alignment:
Q  122 aggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgccc 174  Q
    ||||||||||||| ||||| |||||||  |||| |||||||||| ||||||||    
T  42455789 aggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgccc 42455841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 48; Significance: 2e-18; HSPs: 6)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 439021 - 439072
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgca 297  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  439021 tgttcaattgcacttttgccccttatctttttgctaattgtgcaattttgca 439072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 297
Target Start/End: Complemental strand, 183595 - 183544
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgca 297  Q
    |||| ||||||||||||||||| ||||||||| | |||||||||||||||||    
T  183595 tgtttaattgcacttttgccccctatctttttaccaattgtgcgattttgca 183544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 297
Target Start/End: Complemental strand, 439248 - 439203
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgca 297  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||    
T  439248 aattgcactttttccccttatctttt-gctaattgtgcgattttgca 439203  T

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Target: scaffold0001; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 438930 - 438979
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||| ||||| |||||||||||||| ||||||||| ||||||    
T  438930 ggcttaattgcacttttcccccctatcttttgctaattgtgcgattttgc 438979  T

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Target: scaffold0001; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 251 - 300
Target Start/End: Original strand, 438935 - 438983
Alignment:
Q  251 aattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  438935 aattgcacttttcccccctatctttt-gctaattgtgcgattttgcaccc 438983  T

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Target: scaffold0001; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 165
Target Start/End: Complemental strand, 183718 - 183674
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcg 165  Q
    |||||||||||||| ||||| ||||||| |||||| |||||||||    
T  183718 aaggcttaattgcacttttcccccctatattttgctaattgtgcg 183674  T

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Target: scaffold1221 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 1604 - 1658
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  1604 tgttcaattgcacttttgtctcttatctttttgctaattgtgcgattttgcaccc 1658  T

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Target: scaffold0328 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 6849 - 6800
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6849 ggcttaattgcatttttcacccctatcttttgccaattgtgcgattttgc 6800  T

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Target: scaffold0328; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 123 - 170
Target Start/End: Original strand, 6152 - 6199
Alignment:
Q  123 ggcttaattgcatttttcacccctatcttttgccaattgtgcgttttt 170  Q
    |||||||||||| |||||||| ||||||||||| ||||||||| ||||    
T  6152 ggcttaattgcacttttcacctctatcttttgctaattgtgcgatttt 6199  T

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Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 412044 - 412090
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgatt 292  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  412044 tgttcaattgcacttttgccccctatctttttgctaattgtgcgatt 412090  T

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Target: scaffold0598 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 6806 - 6752
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||||||||||| |||||||||||| |  ||||||||||||    
T  6806 tgttcaattgcacttttgccccttatttttttgctaattctatgattttgcaccc 6752  T

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Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 16976 - 17030
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||||||||||||||||| ||| ||||||||  |||||||| |||||||||||||    
T  16976 tgttcaattgcacttttgtcccctatcttttctctaattgtacgattttgcaccc 17030  T

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Target: scaffold0535 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 10010 - 10061
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||| ||||  ||||||||||||||||||||| || ||||||    
T  10010 aaggcttaattgcacttttgccccctatcttttgccaattgtacgattttgc 10061  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 205685 - 205735
Alignment:
Q  121 aaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    |||||||||||||||||||| ||| |||||||||| ||||||||| ||||||    
T  205685 aaggcttaattgcatttttctccc-tatcttttgctaattgtgcgattttgc 205735  T

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Target: scaffold0460 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 325 - 379
Alignment:
Q  118 aataaggcttaattgcatttttcacccctatcttttgccaattgtgcgtttttgc 172  Q
    ||||||||||||||||| ||||| |||||||  |||| |||||||||| ||||||    
T  325 aataaggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 379  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 73086 - 73140
Alignment:
Q  246 tgttcaattgcacttttgccccttatctttttgctaattgtgcgattttgcaccc 300  Q
    |||| ||||||||||||| ||| ||||||||||  || |||||||||||||||||    
T  73086 tgtttaattgcacttttgtcccctatctttttgtcaactgtgcgattttgcaccc 73140  T

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